BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0005.0375.p         (123 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc1323 [GER] COG0697 Permeases of the drug/metabolite transport...   152   2e-37
BMEII0439 [GER] COG0697 Permeases of the drug/metabolite transpo...    64   6e-11
mll1264 [GER] COG0697 Permeases of the drug/metabolite transport...    62   2e-10

>RSc1323 [GER] COG0697 Permeases of the drug/metabolite transporter (DMT)
           superfamily Rso Ralstonia solanacearum
          Length = 123

 Score =  152 bits (384), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 81/123 (65%), Positives = 97/123 (78%)

Query: 1   MNLTTFGFIFAGICLNAVAQLLLKAGTNAVGAIHLTAGNWFSTGLKLAMQLPIIGGLSCY 60
           MNL TFG I  G+ LNA AQLLLKAG NA+G    +  N    G+KLA QLPIIGGL+CY
Sbjct: 1   MNLVTFGLILTGVMLNACAQLLLKAGVNAIGRFAFSVENIVPIGIKLATQLPIIGGLACY 60

Query: 61  VISVVVWIIGLSRVDVTVAYPMLSLGYIINAVGAWYFLGEAVSLQRLLAIGVIIVGVVLL 120
           VISVVVWI+GLSRVDVT+AYPMLSLGY++NA+ AWY  GE +SLQRL+ I +I++GV +L
Sbjct: 61  VISVVVWILGLSRVDVTIAYPMLSLGYVVNAILAWYLFGEVLSLQRLIGITIILIGVFVL 120

Query: 121 TRS 123
            RS
Sbjct: 121 ARS 123


>BMEII0439 [GER] COG0697 Permeases of the drug/metabolite transporter (DMT)
           superfamily Bme Brucella melitensis
          Length = 159

 Score = 64.3 bits (155), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 60/116 (51%)

Query: 8   FIFAGICLNAVAQLLLKAGTNAVGAIHLTAGNWFSTGLKLAMQLPIIGGLSCYVISVVVW 67
           FI   +  NA AQL+LK G   +G I  +A        ++     +  GL  +VIS+   
Sbjct: 26  FILFTVMTNAAAQLMLKYGMITLGPISFSADTLIQRIFQIVFNPWVFAGLFTFVISMASH 85

Query: 68  IIGLSRVDVTVAYPMLSLGYIINAVGAWYFLGEAVSLQRLLAIGVIIVGVVLLTRS 123
           +  LS+VD++ AYP LSL Y+  A+ AW    E +   ++  I  I +G +L+ +S
Sbjct: 86  LYVLSKVDLSFAYPFLSLAYVAVALCAWLLFKEELGAYKIAGIAFICIGTILIAQS 141


>mll1264 [GER] COG0697 Permeases of the drug/metabolite transporter (DMT)
           superfamily Mlo Mesorhizobium loti
          Length = 149

 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 63/116 (54%)

Query: 8   FIFAGICLNAVAQLLLKAGTNAVGAIHLTAGNWFSTGLKLAMQLPIIGGLSCYVISVVVW 67
           FI   +  NA AQL+LK G  ++G I     N     L++     +  GL  +VIS+   
Sbjct: 11  FILFTVMTNAAAQLMLKQGMMSLGPISFEGVNPLFKLLQIVFSPWVFLGLCTFVISMASH 70

Query: 68  IIGLSRVDVTVAYPMLSLGYIINAVGAWYFLGEAVSLQRLLAIGVIIVGVVLLTRS 123
           +  LS+V+++ AYP LSL Y+  A+ A++   E ++  R+  I  I VG VL+ +S
Sbjct: 71  LYVLSKVELSFAYPFLSLAYVAVAIFAYFVFREDINGWRIAGIAFICVGTVLIAQS 126