BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0005.0329.p (512 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value YPO3000_2 [V] COG0577 ABC-type antimicrobial peptide transport s... 537 e-152 NMA0729_2 [V] COG0577 ABC-type antimicrobial peptide transport s... 449 e-126 NMB0549_2 [V] COG0577 ABC-type antimicrobial peptide transport s... 449 e-126 YPO1365_2 [V] COG0577 ABC-type antimicrobial peptide transport s... 446 e-125 STM0942_2 [V] COG0577 ABC-type antimicrobial peptide transport s... 421 e-117 >YPO3000_2 [V] COG0577 ABC-type antimicrobial peptide transport system, permease component Ype Yersinia pestis Length = 401 Score = 537 bits (1384), Expect = e-152, Method: Compositional matrix adjust. Identities = 255/401 (63%), Positives = 323/401 (80%) Query: 112 RAWLDRFKEALRMSLLAMNAHRLRSFLTMLGIIIGIASVVSVVALGSGSREQILADISAM 171 + DR EA +M++LAM A RLR+ LTMLGIIIGIASVVSVVALG GS++Q+LA+I+AM Sbjct: 1 KVQYDRLHEAFKMAILAMAAQRLRTALTMLGIIIGIASVVSVVALGKGSQQQVLANINAM 60 Query: 172 GTNTIDIFPGADFGDMKSASIRTLTPADAAALAEQNFVDSVTPSVATSSSARYGNISVTA 231 GT+T++IFPG DFGDM+SA+I TL DA LA+Q ++ SVTP+V+TS + RYGN SV+ Sbjct: 61 GTSTLEIFPGKDFGDMRSAAIHTLRDTDADVLAQQGYIHSVTPTVSTSVTLRYGNKSVSG 120 Query: 232 TINGVGEQYFRVRGLKMAQGKSFDTEGIRRYAQEVVIDANSYKKLFPEGGNALGEVIFLG 291 T+NGVGEQYF VRG +AQG +F + Q+ VID N+ KLFP G LG+VI LG Sbjct: 121 TVNGVGEQYFLVRGYTIAQGMAFTRTSVNDLMQDAVIDENTRDKLFPNGETPLGKVILLG 180 Query: 292 SVPCRIIGVTQKRENGFGNNNALNVWVPYTTAMSRVIGQRHLSGITVRVNNQVPSAAAEQ 351 S+PCR+IGV K+++GFG++ LNVW+PYTTAM R++GQ +L ITVRVN+ + A AEQ Sbjct: 181 SLPCRVIGVAAKKQSGFGSDENLNVWIPYTTAMKRMLGQSYLKSITVRVNDDIDLANAEQ 240 Query: 352 GIVELMTLRHRTKDFYLFNTDSIRQTVEKATATLTLLVSMIALISLVVGGIGVMNIMLVS 411 G+++L++ RH T+DF++ NTDSIRQT++ T+T+TLLVSMIA+ISL+VGGIGVMNIMLVS Sbjct: 241 GVIKLLSQRHGTQDFFVMNTDSIRQTIQATTSTMTLLVSMIAVISLIVGGIGVMNIMLVS 300 Query: 412 VTERTREIGVRMAVGARQSDIMQQFLIEAVLVCLAGGLLGVLLALSFGALFSHFVSSFRM 471 VTERT+EIGVRMAVGAR SDIMQQFLIEAVLVCL GG LGV L+L G LFS F S+F M Sbjct: 301 VTERTKEIGVRMAVGARASDIMQQFLIEAVLVCLLGGSLGVALSLGIGLLFSLFSSNFSM 360 Query: 472 IYSTASIVSAFACSTLIGVVFGFLPARNAARLNPVDALARE 512 +YS ASI++AF CS+LIGV+FGF PA+ AA ++P+ AL RE Sbjct: 361 VYSAASIITAFVCSSLIGVIFGFFPAKRAAEMDPIRALERE 401 >NMA0729_2 [V] COG0577 ABC-type antimicrobial peptide transport system, permease component NmA Neisseria meningitidis Z2491 Length = 395 Score = 449 bits (1154), Expect = e-126, Method: Compositional matrix adjust. Identities = 219/396 (55%), Positives = 294/396 (74%), Gaps = 1/396 (0%) Query: 117 RFKEALRMSLLAMNAHRLRSFLTMLGIIIGIASVVSVVALGSGSREQILADISAMGTNTI 176 +F EA RMS+ A+ AH++RS LTMLGIIIGIASVVSVVALG+GS+++IL DIS++GTNTI Sbjct: 1 QFVEAFRMSVQAVLAHKMRSLLTMLGIIIGIASVVSVVALGNGSQKKILEDISSIGTNTI 60 Query: 177 DIFPGADFGDMKSASIRTLTPADAAALAEQNFVDSVTPSVATSSSARYGNISVTATINGV 236 IFPG FGD +S I+TLT DA +A+Q++V S TP ++ + Y N +TA++ GV Sbjct: 61 SIFPGRGFGDRRSGRIKTLTIDDAKIIAKQSYVASATPMTSSGGTLTYRNTDLTASLYGV 120 Query: 237 GEQYFRVRGLKMAQGKSFDTEGIRRYAQEVVIDANSYKKLFPEGGNALGEVIFLGSVPCR 296 GEQYF VRGLK+ G+ FD ++ AQ VVID N KLF + + LG+ I P Sbjct: 121 GEQYFDVRGLKLETGRLFDENDVKEDAQVVVIDQNVKDKLFADS-DPLGKTILFRKRPLT 179 Query: 297 IIGVTQKRENGFGNNNALNVWVPYTTAMSRVIGQRHLSGITVRVNNQVPSAAAEQGIVEL 356 +IGV +K EN FGN++ L +W PYTT M ++ G+ H + ITV++ + + AE+G+ +L Sbjct: 180 VIGVMKKDENAFGNSDVLMLWSPYTTVMHQITGESHTNSITVKIKDNANTQVAEKGLTDL 239 Query: 357 MTLRHRTKDFYLFNTDSIRQTVEKATATLTLLVSMIALISLVVGGIGVMNIMLVSVTERT 416 + RH T+DF++ N+DSIRQ VE T T+ LL+S IALISLVVGGIGVMNIMLVSVTERT Sbjct: 240 LKARHGTEDFFMNNSDSIRQIVESTTGTMKLLISSIALISLVVGGIGVMNIMLVSVTERT 299 Query: 417 REIGVRMAVGARQSDIMQQFLIEAVLVCLAGGLLGVLLALSFGALFSHFVSSFRMIYSTA 476 +EIG+RMA+GAR+ +I+QQFLIEAVL+C+ GGL+GV L+ + +F+HFV+ F M S Sbjct: 300 KEIGIRMAIGARRGNILQQFLIEAVLICVIGGLVGVGLSAAVSLVFNHFVTDFPMDISAM 359 Query: 477 SIVSAFACSTLIGVVFGFLPARNAARLNPVDALARE 512 S++ A ACST IG+ FGF+PA AA+LNP+DALA++ Sbjct: 360 SVIGAVACSTGIGIAFGFMPANKAAKLNPIDALAQD 395 >NMB0549_2 [V] COG0577 ABC-type antimicrobial peptide transport system, permease component Nme Neisseria meningitidis MC58 Length = 395 Score = 449 bits (1154), Expect = e-126, Method: Compositional matrix adjust. Identities = 219/396 (55%), Positives = 294/396 (74%), Gaps = 1/396 (0%) Query: 117 RFKEALRMSLLAMNAHRLRSFLTMLGIIIGIASVVSVVALGSGSREQILADISAMGTNTI 176 +F EA RMS+ A+ AH++RS LTMLGIIIGIASVVSVVALG+GS+++IL DIS++GTNTI Sbjct: 1 QFVEAFRMSVQAVLAHKMRSLLTMLGIIIGIASVVSVVALGNGSQKKILEDISSIGTNTI 60 Query: 177 DIFPGADFGDMKSASIRTLTPADAAALAEQNFVDSVTPSVATSSSARYGNISVTATINGV 236 IFPG FGD +S I+TLT DA +A+Q++V S TP ++ + Y N +TA++ GV Sbjct: 61 SIFPGRGFGDRRSGRIKTLTIDDAKIIAKQSYVASATPMTSSGGTLTYRNTDLTASLYGV 120 Query: 237 GEQYFRVRGLKMAQGKSFDTEGIRRYAQEVVIDANSYKKLFPEGGNALGEVIFLGSVPCR 296 GEQYF VRGLK+ G+ FD ++ AQ VVID N KLF + + LG+ I P Sbjct: 121 GEQYFDVRGLKLETGRLFDENDVKEDAQVVVIDQNVKDKLFADS-DPLGKTILFRKRPLT 179 Query: 297 IIGVTQKRENGFGNNNALNVWVPYTTAMSRVIGQRHLSGITVRVNNQVPSAAAEQGIVEL 356 +IGV +K EN FGN++ L +W PYTT M ++ G+ H + ITV++ + + AE+G+ +L Sbjct: 180 VIGVMKKDENAFGNSDVLMLWSPYTTVMHQITGESHTNSITVKIKDNANTQVAEKGLTDL 239 Query: 357 MTLRHRTKDFYLFNTDSIRQTVEKATATLTLLVSMIALISLVVGGIGVMNIMLVSVTERT 416 + RH T+DF++ N+DSIRQ VE T T+ LL+S IALISLVVGGIGVMNIMLVSVTERT Sbjct: 240 LKARHGTEDFFMNNSDSIRQIVESTTGTMKLLISSIALISLVVGGIGVMNIMLVSVTERT 299 Query: 417 REIGVRMAVGARQSDIMQQFLIEAVLVCLAGGLLGVLLALSFGALFSHFVSSFRMIYSTA 476 +EIG+RMA+GAR+ +I+QQFLIEAVL+C+ GGL+GV L+ + +F+HFV+ F M S Sbjct: 300 KEIGIRMAIGARRGNILQQFLIEAVLICVIGGLVGVGLSAAVSLVFNHFVTDFPMDISAM 359 Query: 477 SIVSAFACSTLIGVVFGFLPARNAARLNPVDALARE 512 S++ A ACST IG+ FGF+PA AA+LNP+DALA++ Sbjct: 360 SVIGAVACSTGIGIAFGFMPANKAAKLNPIDALAQD 395 >YPO1365_2 [V] COG0577 ABC-type antimicrobial peptide transport system, permease component Ype Yersinia pestis Length = 395 Score = 446 bits (1147), Expect = e-125, Method: Compositional matrix adjust. Identities = 212/395 (53%), Positives = 295/395 (74%) Query: 118 FKEALRMSLLAMNAHRLRSFLTMLGIIIGIASVVSVVALGSGSREQILADISAMGTNTID 177 F+EAL M+ AM+A+++R+ LTMLGIIIGIASVVS++ +G +++ +LADI A+GTNTID Sbjct: 1 FREALLMAWRAMSANKMRTALTMLGIIIGIASVVSILVVGDAAKQLVLADIRAIGTNTID 60 Query: 178 IFPGADFGDMKSASIRTLTPADAAALAEQNFVDSVTPSVATSSSARYGNISVTATINGVG 237 I+PG DFGD ++ + L D AAL Q++V +V+PS+ S R+GNI V A++ GV Sbjct: 61 IYPGKDFGDDDPSTRQALVHDDMAALKAQSYVSAVSPSIGGSMRLRFGNIDVAASVLGVS 120 Query: 238 EQYFRVRGLKMAQGKSFDTEGIRRYAQEVVIDANSYKKLFPEGGNALGEVIFLGSVPCRI 297 ++YFRV G+ M QG E + R AQ VVID N+ ++LFP + +G+VI +G++P + Sbjct: 121 DEYFRVFGMAMEQGAPITREQVERQAQTVVIDLNTQRRLFPHMKDVVGQVILVGNMPATV 180 Query: 298 IGVTQKRENGFGNNNALNVWVPYTTAMSRVIGQRHLSGITVRVNNQVPSAAAEQGIVELM 357 +GV ++++ FG+N AL VWVPY+T +R++G+ + IT+R+ S AEQ +V L+ Sbjct: 181 VGVVAEKKSMFGSNKALRVWVPYSTMANRLMGRSYFDSITIRIKEGYSSKEAEQQLVRLL 240 Query: 358 TLRHRTKDFYLFNTDSIRQTVEKATATLTLLVSMIALISLVVGGIGVMNIMLVSVTERTR 417 TLRH KD + +N DS+ QT EK T T+ L ++++A+ISLVVGGIGVMNIMLVSVTERTR Sbjct: 241 TLRHGKKDIFTYNMDSLLQTAEKTTQTMQLFLTLVAVISLVVGGIGVMNIMLVSVTERTR 300 Query: 418 EIGVRMAVGARQSDIMQQFLIEAVLVCLAGGLLGVLLALSFGALFSHFVSSFRMIYSTAS 477 EIG+RMAVGAR SD+MQQFLIEAVLVCL GG LG+ L+ + G + F+ ++R+ + + Sbjct: 301 EIGIRMAVGARSSDVMQQFLIEAVLVCLIGGALGISLSFAIGLIVEMFLPNWRIAFPPMA 360 Query: 478 IVSAFACSTLIGVVFGFLPARNAARLNPVDALARE 512 + SAF CST+IGVVFG+LPAR+AARLNP+DALARE Sbjct: 361 LFSAFLCSTVIGVVFGYLPARSAARLNPIDALARE 395 >STM0942_2 [V] COG0577 ABC-type antimicrobial peptide transport system, permease component Sty Salmonella typhimurium LT2 Length = 395 Score = 421 bits (1082), Expect = e-117, Method: Compositional matrix adjust. Identities = 212/395 (53%), Positives = 285/395 (72%) Query: 118 FKEALRMSLLAMNAHRLRSFLTMLGIIIGIASVVSVVALGSGSREQILADISAMGTNTID 177 F+EAL M+ LAM A+++R+ LTMLGIIIGIASVVS+V +G +++ +LADI AMGTNTID Sbjct: 1 FREALSMAWLAMAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRAMGTNTID 60 Query: 178 IFPGADFGDMKSASIRTLTPADAAALAEQNFVDSVTPSVATSSSARYGNISVTATINGVG 237 I PG DFGD + L D A+ +Q +V+S TPSV+ S RYGNI + NGV Sbjct: 61 IHPGKDFGDDNPQYRQALKYDDLVAIQKQPWVNSATPSVSKSLRLRYGNIDIAVNANGVS 120 Query: 238 EQYFRVRGLKMAQGKSFDTEGIRRYAQEVVIDANSYKKLFPEGGNALGEVIFLGSVPCRI 297 YF V G+ +G +F+ + AQ VV+DAN+ ++LFP N +GEV+ G++P + Sbjct: 121 GDYFNVYGMSFREGNTFNAVQQQDRAQVVVLDANTRRQLFPNKANVVGEVVLAGNMPVIV 180 Query: 298 IGVTQKRENGFGNNNALNVWVPYTTAMSRVIGQRHLSGITVRVNNQVPSAAAEQGIVELM 357 IGV +++ + +GN+N L VW+PY+T R++GQ L+ ITVRV + V S AEQ + L+ Sbjct: 181 IGVAEEKPSMYGNSNLLQVWLPYSTMSDRIMGQSWLNSITVRVKDGVDSDQAEQQLTRLL 240 Query: 358 TLRHRTKDFYLFNTDSIRQTVEKATATLTLLVSMIALISLVVGGIGVMNIMLVSVTERTR 417 TLRH KDF+ +N DS+ +T EK T TL L ++++A+ISLVVGGIGVMNIMLVSVTERTR Sbjct: 241 TLRHGKKDFFTWNMDSVLKTAEKTTYTLQLFLTLVAVISLVVGGIGVMNIMLVSVTERTR 300 Query: 418 EIGVRMAVGARQSDIMQQFLIEAVLVCLAGGLLGVLLALSFGALFSHFVSSFRMIYSTAS 477 EIG+RMAVGAR SD++QQFLIEAVLVCL GG LG+ L++ + F+ + + +S + Sbjct: 301 EIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGISLSMFIAFMLQLFLPGWEIGFSLTA 360 Query: 478 IVSAFACSTLIGVVFGFLPARNAARLNPVDALARE 512 + SAF CST G++FG+LPARNAARL+PVDALARE Sbjct: 361 LASAFLCSTFTGILFGWLPARNAARLDPVDALARE 395