BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0005.0323.p (376 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSp0349 [N] COG1706 Flagellar basal-body P-ring protein Rso Rals... 429 e-120 YPO1806 [N] COG1706 Flagellar basal-body P-ring protein Ype Yers... 385 e-106 PA1084 [N] COG1706 Flagellar basal-body P-ring protein Pae Pseud... 372 e-103 flgI [N] COG1706 Flagellar basal-body P-ring protein Eco Escheri... 355 1e-97 ZflgI [N] COG1706 Flagellar basal-body P-ring protein EcZ Escher... 354 2e-97 >RSp0349 [N] COG1706 Flagellar basal-body P-ring protein Rso Ralstonia solanacearum Length = 369 Score = 429 bits (1102), Expect = e-120, Method: Compositional matrix adjust. Identities = 214/350 (61%), Positives = 273/350 (78%), Gaps = 2/350 (0%) Query: 27 AQAERLKDLASIQGVRQNQLVGYGLVVGLDGSGDQTTQTPFTVQSVISMLQQLGVNVPTG 86 A A+R+KDL +I GVR+N L+GYGLVVGLDGSGDQTTQTPFT+QS +ML Q G+NVP+G Sbjct: 22 AHADRIKDLTTIAGVRENALIGYGLVVGLDGSGDQTTQTPFTIQSFNNMLSQFGINVPSG 81 Query: 87 TSSNMQLKNVAAAMVTANLPAFAQPGQLIDVTVSSIGNAKSIRGGTLLMAPLKGADGQIY 146 S +QLKN AA +VTA+LPAF +PGQ IDVTVSSIGNAKS+RGGTLL+ PLKG DGQ+Y Sbjct: 82 AS--IQLKNTAAVVVTASLPAFVRPGQTIDVTVSSIGNAKSLRGGTLLLTPLKGVDGQLY 139 Query: 147 AIAQGNIVVGGAGGSAAGSSTIINQLSAGRISGGATVERAVPSSLGSSDMIVLELNDNDF 206 A+AQGN+V+GGAG SA GS INQL AGRI+ GATVER V +++G + I L+ DF Sbjct: 140 ALAQGNVVIGGAGASANGSKVQINQLGAGRIANGATVERTVQATVGEAGSIQLDTGTTDF 199 Query: 207 STASRVVDALNKRFGNETAVAQDGRVIRVRAPISSGDRVAFLGALENVDVTPGKLAAKVI 266 T +V+A+NK+FG +TA A DGR + VRAP + DRV F+ L+N++VTP + AA+V+ Sbjct: 200 GTVQNIVNAINKQFGADTAEAADGRTVNVRAPALAADRVGFVAKLQNIEVTPAQAAARVV 259 Query: 267 LNARTGSVVMNQSVMLDTCAVSHGNLSVVIQADNAVSQPNALAGGQTAGVQNAQISINKE 326 +NARTGSVVMNQ V L+ CAV+HGNLSV I + VSQP + GQT + I + ++ Sbjct: 260 VNARTGSVVMNQQVKLEPCAVAHGNLSVTISTEPVVSQPAPFSQGQTVAGARSNIEVKQQ 319 Query: 327 PGKVMLLKGGASLAEVVKALNAIGATPQDLLAILQAMKAAGSLRAELEVI 376 G ++ +KGG +LA+VVKA+NAIGA PQDL++ILQAMKAA +LRA+LE+I Sbjct: 320 GGSLINVKGGTNLADVVKAINAIGANPQDLISILQAMKAANALRADLEII 369 >YPO1806 [N] COG1706 Flagellar basal-body P-ring protein Ype Yersinia pestis Length = 369 Score = 385 bits (988), Expect = e-106, Method: Compositional matrix adjust. Identities = 207/355 (58%), Positives = 269/355 (75%), Gaps = 7/355 (1%) Query: 25 MPAQAERLKDLASIQGVRQNQLVGYGLVVGLDGSGDQTTQTPFTVQSVISMLQQLGVNVP 84 +PA AER++DL ++QGVR N L+GYGLVVGLDGSGDQT QTPFT QS+ +ML QLG+ VP Sbjct: 19 LPASAERIRDLVTVQGVRDNALIGYGLVVGLDGSGDQTMQTPFTTQSLSNMLSQLGITVP 78 Query: 85 TGTSSNMQLKNVAAAMVTANLPAFAQPGQLIDVTVSSIGNAKSIRGGTLLMAPLKGADGQ 144 GT NMQLKNVAA MVTA LPAF++ GQ IDV VSS+GNAKSIRGGTLLM PLKG D Q Sbjct: 79 PGT--NMQLKNVAAVMVTAKLPAFSRAGQTIDVVVSSMGNAKSIRGGTLLMTPLKGVDNQ 136 Query: 145 IYAIAQGNIVVGGAGGSAAGSSTIINQLSAGRISGGATVERAVPSSLGSSDMIVLELNDN 204 +YA+AQGN++VGGAG +A GSS +NQL+ GRIS GAT+ER +P++ G+ +I L+LN Sbjct: 137 VYALAQGNVLVGGAGAAAGGSSVQVNQLAGGRISNGATIERELPTTFGTDGIINLQLNSE 196 Query: 205 DFSTASRVVDALNKRFGNETAVAQDGRVIRVRAPISSGDRVAFLGALEN--VDVTPGKLA 262 DF+ A +V DA+N++ G +A A D R I+V P +V FL ++N ++V PG Sbjct: 197 DFTLAQQVSDAINRQRGFGSATAIDARTIQVLVPRGGSSQVRFLADIQNIPINVDPGD-- 254 Query: 263 AKVILNARTGSVVMNQSVMLDTCAVSHGNLSVVIQADNAVSQPNA-LAGGQTAGVQNAQI 321 AKVI+N+RTGSVVMN++V+LD+CAV+ GNLSVV+ N VSQP+ GGQT N QI Sbjct: 255 AKVIINSRTGSVVMNRNVVLDSCAVAQGNLSVVVDKQNIVSQPDTPFGGGQTVVTPNTQI 314 Query: 322 SINKEPGKVMLLKGGASLAEVVKALNAIGATPQDLLAILQAMKAAGSLRAELEVI 376 S+ ++ G + + +L VV+ALN++GATP DL++ILQAM++AG LRA+LE+I Sbjct: 315 SVQQQGGVLQRVNASPNLNNVVRALNSLGATPIDLMSILQAMESAGCLRAKLEII 369 >PA1084 [N] COG1706 Flagellar basal-body P-ring protein Pae Pseudomonas aeruginosa Length = 369 Score = 372 bits (956), Expect = e-103, Method: Compositional matrix adjust. Identities = 195/348 (56%), Positives = 250/348 (71%), Gaps = 2/348 (0%) Query: 30 ERLKDLASIQGVRQNQLVGYGLVVGLDGSGDQTTQTPFTVQSVISMLQQLGVNVPTGTSS 89 ERLKD+ASIQGVR NQL+GYGLVVGL GSGDQTTQTPFT+Q+ +ML Q G+ VP Sbjct: 23 ERLKDIASIQGVRTNQLIGYGLVVGLSGSGDQTTQTPFTLQTFNNMLAQFGIKVPANVG- 81 Query: 90 NMQLKNVAAAMVTANLPAFAQPGQLIDVTVSSIGNAKSIRGGTLLMAPLKGADGQIYAIA 149 N+QLKNVAA V A+LP FA+PGQ IDVTVSSIGNAKS+RGG+LLM PLKG DGQ+YA+A Sbjct: 82 NVQLKNVAAVSVHADLPPFAKPGQPIDVTVSSIGNAKSLRGGSLLMTPLKGIDGQVYAVA 141 Query: 150 QGNIVVGGAGGSAA-GSSTIINQLSAGRISGGATVERAVPSSLGSSDMIVLELNDNDFST 208 QGN+VVGG GS +N SAGRI GATVERAVPS + + L LN DF+T Sbjct: 142 QGNLVVGGFDAEGRDGSKITVNVPSAGRIPAGATVERAVPSGFDQGNSLTLNLNRPDFTT 201 Query: 209 ASRVVDALNKRFGNETAVAQDGRVIRVRAPISSGDRVAFLGALENVDVTPGKLAAKVILN 268 A R+VD +N+ G A A DG +RV AP+ RV +L LEN+DV PG+ AKVI+N Sbjct: 202 AKRIVDRINELLGPGVAHAVDGGSVRVSAPLDPNQRVDYLSILENLDVQPGEAVAKVIIN 261 Query: 269 ARTGSVVMNQSVMLDTCAVSHGNLSVVIQADNAVSQPNALAGGQTAGVQNAQISINKEPG 328 +RTG++V+ Q+V + AV+HG+L+V I D VSQP A + GQTA V ++++ +E Sbjct: 262 SRTGTIVIGQNVKVSPAAVTHGSLTVSITEDPIVSQPGAFSNGQTAVVPRSRVNAEEETK 321 Query: 329 KVMLLKGGASLAEVVKALNAIGATPQDLLAILQAMKAAGSLRAELEVI 376 + G +L ++V+A+N +GA P DL+AIL+A+K AG+L+A+L VI Sbjct: 322 PMFKFGPGTTLDDIVRAVNQVGAAPSDLMAILEALKQAGALQADLIVI 369 >flgI [N] COG1706 Flagellar basal-body P-ring protein Eco Escherichia coli K12 Length = 365 Score = 355 bits (910), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 208/363 (57%), Positives = 266/363 (73%), Gaps = 7/363 (1%) Query: 17 AALALAAAMPAQAERLKDLASIQGVRQNQLVGYGLVVGLDGSGDQTTQTPFTVQSVISML 76 A + L AQAER++DL S+QGVRQN L+GYGLVVGLDG+GDQTTQTPFT Q++ +ML Sbjct: 7 ALILLLVTTAAQAERIRDLTSVQGVRQNSLIGYGLVVGLDGTGDQTTQTPFTTQTLNNML 66 Query: 77 QQLGVNVPTGTSSNMQLKNVAAAMVTANLPAFAQPGQLIDVTVSSIGNAKSIRGGTLLMA 136 QLG+ VPTGT NMQLKNVAA MVTA+LP F + GQ IDV VSS+GNAKS+RGGTLLM Sbjct: 67 SQLGITVPTGT--NMQLKNVAAVMVTASLPPFGRQGQTIDVVVSSMGNAKSLRGGTLLMT 124 Query: 137 PLKGADGQIYAIAQGNIVVGGAGGSAAGSSTIINQLSAGRISGGATVERAVPSSLGSSDM 196 PLKG D Q+YA+AQGNI+VGGAG SA GSS +NQL+ GRI+ GA +ER +PS G + Sbjct: 125 PLKGVDSQVYALAQGNILVGGAGASAGGSSVQVNQLNGGRITNGAVIERELPSQFGVGNT 184 Query: 197 IVLELNDNDFSTASRVVDALNKRFGNETAVAQDGRVIRVRAPISSGDRVAFLGALEN--V 254 + L+LND DFS A ++ D +N+ G +A A D R I+VR P + +V FL ++N V Sbjct: 185 LNLQLNDEDFSMAQQIADTINRVRGYGSATALDARTIQVRVPSGNSSQVRFLADIQNMQV 244 Query: 255 DVTPGKLAAKVILNARTGSVVMNQSVMLDTCAVSHGNLSVVIQADNAVSQPNA-LAGGQT 313 +VTP AKV++N+RTGSVVMN+ V LD+CAV+ GNLSV + VSQP+ GGQT Sbjct: 245 NVTPQD--AKVVINSRTGSVVMNREVTLDSCAVAQGNLSVTVNRQANVSQPDTPFGGGQT 302 Query: 314 AGVQNAQISINKEPGKVMLLKGGASLAEVVKALNAIGATPQDLLAILQAMKAAGSLRAEL 373 QI + + G + ++ ASL VV+ALNA+GATP DL++ILQ+M++AG LRA+L Sbjct: 303 VVTPQTQIDLRQSGGSLQSVRSSASLNNVVRALNALGATPMDLMSILQSMQSAGCLRAKL 362 Query: 374 EVI 376 E+I Sbjct: 363 EII 365 >ZflgI [N] COG1706 Flagellar basal-body P-ring protein EcZ Escherichia coli O157:H7 EDL933 Length = 365 Score = 354 bits (909), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 207/363 (57%), Positives = 266/363 (73%), Gaps = 7/363 (1%) Query: 17 AALALAAAMPAQAERLKDLASIQGVRQNQLVGYGLVVGLDGSGDQTTQTPFTVQSVISML 76 A + L AQAER++DL S+QGVRQN L+GYGLVVGLDG+GDQTTQTPFT Q++ +ML Sbjct: 7 ALILLLVTTAAQAERIRDLTSVQGVRQNSLIGYGLVVGLDGTGDQTTQTPFTTQTLNNML 66 Query: 77 QQLGVNVPTGTSSNMQLKNVAAAMVTANLPAFAQPGQLIDVTVSSIGNAKSIRGGTLLMA 136 QLG+ VPTGT NMQLKNVAA MVTA+LP F + GQ IDV VSS+GNAKS+RGGTLLM Sbjct: 67 SQLGITVPTGT--NMQLKNVAAVMVTASLPPFGRQGQTIDVVVSSMGNAKSLRGGTLLMT 124 Query: 137 PLKGADGQIYAIAQGNIVVGGAGGSAAGSSTIINQLSAGRISGGATVERAVPSSLGSSDM 196 PLKG D Q+YA+AQGNI+VGGAG SA GSS +NQL+ GRI+ GA +ER +PS G + Sbjct: 125 PLKGVDSQVYALAQGNILVGGAGASAGGSSVQVNQLNGGRITNGAVIERELPSQFGVGNT 184 Query: 197 IVLELNDNDFSTASRVVDALNKRFGNETAVAQDGRVIRVRAPISSGDRVAFLGALEN--V 254 + L+LND DFS A ++ D +N+ G +A A D R I+VR P + +V FL ++N V Sbjct: 185 LNLQLNDEDFSMAQQIADTINRVRGYGSATALDARTIQVRVPSGNSSQVRFLADIQNMQV 244 Query: 255 DVTPGKLAAKVILNARTGSVVMNQSVMLDTCAVSHGNLSVVIQADNAVSQPNA-LAGGQT 313 +VTP AKV++N+RTGSVVMN+ V LD+CA++ GNLSV + VSQP+ GGQT Sbjct: 245 NVTPQD--AKVVINSRTGSVVMNREVTLDSCAIAQGNLSVTVNRQANVSQPDTPFGGGQT 302 Query: 314 AGVQNAQISINKEPGKVMLLKGGASLAEVVKALNAIGATPQDLLAILQAMKAAGSLRAEL 373 QI + + G + ++ ASL VV+ALNA+GATP DL++ILQ+M++AG LRA+L Sbjct: 303 VVTPQTQIDLRQSGGSLQSVRSSASLNNVVRALNALGATPMDLMSILQSMQSAGCLRAKL 362 Query: 374 EVI 376 E+I Sbjct: 363 EII 365