BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0005.0194.p         (168 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc1050 [I] COG0332 3-oxoacyl-[acyl-carrier-protein] synthase II...   245   3e-65
NMB1916 [I] COG0332 3-oxoacyl-[acyl-carrier-protein] synthase II...   182   3e-46
NMA0538 [I] COG0332 3-oxoacyl-[acyl-carrier-protein] synthase II...   182   3e-46
fabH [I] COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III E...   174   6e-44
ZfabH [I] COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III ...   174   6e-44

>RSc1050 [I] COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III Rso
           Ralstonia solanacearum
          Length = 326

 Score =  245 bits (626), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 115/153 (75%), Positives = 133/153 (86%)

Query: 16  MSASQEPGVLATKLHADGSHGHILCVPGSVNNGAVAGSAYLYMDGPAVFKLAVSLLDKVA 75
           + AS EPG+L+T LHADGSH  ILCVPG+V  GA+ GSA+LYMDG AVFKLAV++LDKVA
Sbjct: 174 LQASDEPGILSTALHADGSHADILCVPGNVAGGAIKGSAFLYMDGQAVFKLAVNVLDKVA 233

Query: 76  REALEAANMQSTDVDWLVPHQANIRIMQGTAKKMGLPLEKMVVTVAEHGNTSAASIPLAL 135
           REAL  A ++S+ +DWL+PHQANIRIMQGTAKK+GLP E+MVVTV EHGNTSAASIPLAL
Sbjct: 234 REALALAEVESSQIDWLIPHQANIRIMQGTAKKLGLPGERMVVTVDEHGNTSAASIPLAL 293

Query: 136 DQAVRDGRIQPGHTVMMEGVGGGFTWGAVLVRM 168
           D AVRDGRIQ GH V++EGVGGGFTWGA L+R 
Sbjct: 294 DAAVRDGRIQKGHHVLLEGVGGGFTWGAALLRF 326


>NMB1916 [I] COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III Nme
           Neisseria meningitidis MC58
          Length = 320

 Score =  182 bits (462), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 81/152 (53%), Positives = 115/152 (75%)

Query: 16  MSASQEPGVLATKLHADGSHGHILCVPGSVNNGAVAGSAYLYMDGPAVFKLAVSLLDKVA 75
           +SAS  PG++ +KL ADG++  +L VPG +  G V+GS Y+ MDGP VFK AV +L K+A
Sbjct: 168 LSASDTPGIIHSKLKADGNYLKLLNVPGQIACGKVSGSPYISMDGPGVFKFAVKMLSKIA 227

Query: 76  REALEAANMQSTDVDWLVPHQANIRIMQGTAKKMGLPLEKMVVTVAEHGNTSAASIPLAL 135
            + +E A   +  +DW+VPHQAN RI++ TAK +GL ++K+V+TV +HGNTSAASIPLAL
Sbjct: 228 DDVIEEAGYTAAQIDWIVPHQANRRIIESTAKHLGLSMDKVVLTVQDHGNTSAASIPLAL 287

Query: 136 DQAVRDGRIQPGHTVMMEGVGGGFTWGAVLVR 167
           D  +R G+I+ G  +++EG+GGGF WGAVL++
Sbjct: 288 DTGIRSGQIKRGQNLLLEGIGGGFAWGAVLLQ 319


>NMA0538 [I] COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III NmA
           Neisseria meningitidis Z2491
          Length = 320

 Score =  182 bits (462), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 81/152 (53%), Positives = 115/152 (75%)

Query: 16  MSASQEPGVLATKLHADGSHGHILCVPGSVNNGAVAGSAYLYMDGPAVFKLAVSLLDKVA 75
           +SAS  PG++ +KL ADG++  +L VPG +  G V+GS Y+ MDGP VFK AV +L K+A
Sbjct: 168 LSASDTPGIIHSKLKADGNYLKLLNVPGQIACGKVSGSPYISMDGPGVFKFAVKMLSKIA 227

Query: 76  REALEAANMQSTDVDWLVPHQANIRIMQGTAKKMGLPLEKMVVTVAEHGNTSAASIPLAL 135
            + +E A   +  +DW+VPHQAN RI++ TAK +GL ++K+V+TV +HGNTSAASIPLAL
Sbjct: 228 DDVIEEAGYTAAQIDWIVPHQANRRIIESTAKHLGLSMDKVVLTVQDHGNTSAASIPLAL 287

Query: 136 DQAVRDGRIQPGHTVMMEGVGGGFTWGAVLVR 167
           D  +R G+I+ G  +++EG+GGGF WGAVL++
Sbjct: 288 DTGIRSGQIKRGQNLLLEGIGGGFAWGAVLLQ 319


>fabH [I] COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III Eco
           Escherichia coli K12
          Length = 317

 Score =  174 bits (442), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 83/155 (53%), Positives = 114/155 (73%), Gaps = 5/155 (3%)

Query: 16  MSASQEPGVLATKLHADGSHGHILCVPGS--VNNGAVAGSAYLYMDGPAVFKLAVSLLDK 73
           ++AS+EPG+++T LHADGS+G +L +P +  VN      S +L M G  VFK+AV+ L  
Sbjct: 166 LAASEEPGIISTHLHADGSYGELLTLPNADRVNP---ENSIHLTMAGNEVFKVAVTELAH 222

Query: 74  VAREALEAANMQSTDVDWLVPHQANIRIMQGTAKKMGLPLEKMVVTVAEHGNTSAASIPL 133
           +  E L A N+  + +DWLVPHQAN+RI+  TAKK+G+ ++ +VVT+  HGNTSAAS+P 
Sbjct: 223 IVDETLAANNLDRSQLDWLVPHQANLRIISATAKKLGMSMDNVVVTLDRHGNTSAASVPC 282

Query: 134 ALDQAVRDGRIQPGHTVMMEGVGGGFTWGAVLVRM 168
           ALD+AVRDGRI+PG  V++E  GGGFTWG+ LVR 
Sbjct: 283 ALDEAVRDGRIKPGQLVLLEAFGGGFTWGSALVRF 317


>ZfabH [I] COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III EcZ
           Escherichia coli O157:H7 EDL933
          Length = 317

 Score =  174 bits (442), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 83/155 (53%), Positives = 114/155 (73%), Gaps = 5/155 (3%)

Query: 16  MSASQEPGVLATKLHADGSHGHILCVPGS--VNNGAVAGSAYLYMDGPAVFKLAVSLLDK 73
           ++AS+EPG+++T LHADGS+G +L +P +  VN      S +L M G  VFK+AV+ L  
Sbjct: 166 LAASEEPGIISTHLHADGSYGELLTLPNADRVNP---ENSIHLTMAGNEVFKVAVTELAH 222

Query: 74  VAREALEAANMQSTDVDWLVPHQANIRIMQGTAKKMGLPLEKMVVTVAEHGNTSAASIPL 133
           +  E L A N+  + +DWLVPHQAN+RI+  TAKK+G+ ++ +VVT+  HGNTSAAS+P 
Sbjct: 223 IVDETLAANNLDRSQLDWLVPHQANLRIISATAKKLGMSMDNVVVTLDRHGNTSAASVPC 282

Query: 134 ALDQAVRDGRIQPGHTVMMEGVGGGFTWGAVLVRM 168
           ALD+AVRDGRI+PG  V++E  GGGFTWG+ LVR 
Sbjct: 283 ALDEAVRDGRIKPGQLVLLEAFGGGFTWGSALVRF 317