BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0005.0140.p (472 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1170 [D] COG0037 Predicted ATPase of the PP-loop superfamily ... 246 6e-65 PA3638 [D] COG0037 Predicted ATPase of the PP-loop superfamily i... 208 2e-53 HI0404 [D] COG0037 Predicted ATPase of the PP-loop superfamily i... 208 2e-53 STM0236 [D] COG0037 Predicted ATPase of the PP-loop superfamily ... 203 6e-52 mesJ [D] COG0037 Predicted ATPase of the PP-loop superfamily imp... 197 4e-50 >RSc1170 [D] COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control Rso Ralstonia solanacearum Length = 462 Score = 246 bits (629), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 188/449 (41%), Positives = 247/449 (55%), Gaps = 22/449 (4%) Query: 13 LVLLQQALQDSLSASGF--DAAHDTLAVAYSGGLDSTVLLWVAAQWARENGSTSRLAPLH 70 ++L+ + Q ++ + F T+AVA SGG DS LL A W G RL LH Sbjct: 1 MLLVDKVAQRVVACAAFVVSGGVPTVAVALSGGRDSAALLHAVAAWRDAAGVPVRLVALH 60 Query: 71 VHHGLSPHADAWLAHAQACCAQLGLVLQSERVQLEGVADSGVEEAARLARYAALGRLCRQ 130 +HHGL ADAW A A +G + RV++ A G+EEAAR ARYAAL LC + Sbjct: 61 IHHGLQADADAWEAACARMAAAVGAAFRVRRVRVSTDAGRGIEEAAREARYAALDALCAE 120 Query: 131 QGARMLLTAHHLDDQAETVLLQLLRGSGLAGLSGMDRCNTAPALLGDDRLVMARPFLGVT 190 GA +LLTAHHLDDQAETVLLQLLRG+GL GLS M + R+ + RP+L V Sbjct: 121 TGATLLLTAHHLDDQAETVLLQLLRGAGLDGLSAMPMAR-------ERRVTLLRPWLDVP 173 Query: 191 RAQLEAVADAMSLKWIEDESNSDPRYTRNALRHQVMPALGQVFPGYQQRLARAAGHAQGA 250 R +EA A A +L W+ED SN D RY RNALR ++ + FP Y+ LAR+A H A Sbjct: 174 RGDIEAYARAHALAWVEDPSNGDARYARNALR-PLLAGMAGHFPAYRASLARSAAHLAEA 232 Query: 251 QELLREVAEQDLAHCREDDHLRMPPLRELSEQRFLNLMRHWFGLRGMRMPSAAWMQEMRH 310 L+ EVA+ DLA L + L LS R +R W G+R S+ ++++R Sbjct: 233 AALIEEVAQTDLARIAPAGTLAVAGLAALSGPRQRAALRAWLAGAGLRAVSSRRLEDLRA 292 Query: 311 QLLQADVEAQLCVSHPDGEVHRYRERVFLAPRRMP---PDEGAVATLHWD-GQAQWR--- 363 QLL A + CV P +V RYR + ++ P P + +A +D +A+ + Sbjct: 293 QLLGARADGAPCVRLPGAQVRRYRGQAWIEAAGQPGAGPADCPIAVSRFDPARAEVQRVD 352 Query: 364 LPAWYGTLHFDRIGGDDARPGFDLAWLQGQSLLACGRSGGERIRLAANRPARSLKQQYQS 423 + AW G L F + G D LQ LA R GGERI L P+R+LKQ YQ Sbjct: 353 VAAWGGALLFSPAQAE----GIDARILQAPLSLAA-RRGGERIVLRPGGPSRALKQAYQE 407 Query: 424 ADVPAWERPYLPLVWAGESLLFAAGIGMD 452 A +PAW R LPL++AGE L+FAAG+G D Sbjct: 408 AGIPAWARARLPLLYAGERLVFAAGLGPD 436 >PA3638 [D] COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control Pae Pseudomonas aeruginosa Length = 442 Score = 208 bits (530), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 175/435 (40%), Positives = 222/435 (51%), Gaps = 58/435 (13%) Query: 38 VAYSGGLDSTVLLWVAAQWARENGSTSRLAPLHVHHGLSPHADAWLAHAQACCAQLGLVL 97 VA+SGGLDSTVLL + AQ AR + L+ LHVHHGL AD W AH QA C LG+ L Sbjct: 25 VAFSGGLDSTVLLHLLAQLARSEALPA-LSALHVHHGLQAAADGWPAHCQAVCRSLGIPL 83 Query: 98 QSERVQLEGVADSGVEEAARLARYAALGRLCRQQGARMLLTAHHLDDQAETVLLQLLRGS 157 + ERVQ+ +E+AAR ARY A ++LLTA HLDDQAET+L +LLRG+ Sbjct: 84 RVERVQV--AVGGSIEQAARDARYRAFQ--ANLGEGQVLLTAQHLDDQAETLLFRLLRGA 139 Query: 158 GLAGLSGMDRCNTAPALLGDDRLVMARPFLGVTRAQLEAVADAMSLKWIEDESNSDPRYT 217 GL GL+ M A LG RL RP LGV+RA+LEA A A L W+ED SN DPR++ Sbjct: 140 GLRGLAAM----PASRPLGGGRLC--RPLLGVSRAELEAYAQAHRLDWVEDPSNQDPRFS 193 Query: 218 RNALRHQVMPALGQVFPGYQQRLARAAGHAQGAQELLREVAEQDLAHCREDDHLRMP--- 274 RN LR ++MP L +P +AR A H + A++LL E+A DL CR+ L P Sbjct: 194 RNYLRREIMPRLASHWPQAVAGMARCAAHLREAEDLLAELAAIDLRACRQPSELDWPDWL 253 Query: 275 --------PLRELSEQRFLNLMRHWFGLRGMRMPS----AAWMQEMRHQLLQADVEAQLC 322 PLR LS R NL+R W G + R+P A W L A +A Sbjct: 254 DLPRIALEPLRRLSAARQRNLLRAWLG-QLTRLPDSDHWAGW-----ESLRDAGDDADPI 307 Query: 323 VSHPDGEVHRYRERVFLAPRRMPPDEGAVATLHWDGQAQWRLPAWYGTLHFDRIGGDDAR 382 GE+ R R++ P A WR A G ++R Sbjct: 308 WRLESGELRRGAGRIWWLP------------------ADWRAAA--GPFVWERPAHPLLL 347 Query: 383 PGFDLAWLQGQ----SLLACGRSGGERIRLAANRPARSLKQQYQSADVPAWERPYLPLVW 438 PG L G+ L R GGE + L A R R LK+ A VP++ R LPL++ Sbjct: 348 PGNGRLALLGEVPAGPLRVDYRRGGEVLAL-AGRGRRDLKRLLNEAGVPSFLRGRLPLLF 406 Query: 439 AGESLLFAAGI-GMD 452 + LL A I G+D Sbjct: 407 RADELLAVANIPGLD 421 >HI0404 [D] COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control Hin Haemophilus influenzae Length = 430 Score = 208 bits (530), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 141/429 (32%), Positives = 212/429 (49%), Gaps = 29/429 (6%) Query: 31 AAHDTLAVAYSGGLDSTVLLWVAAQWARENGSTSRLA--PLHVHHGLSPHADAWLAHAQA 88 A +A SGGLDSTVLL + A+ ++ L+ +H+HHGLSP+AD+W H Q Sbjct: 14 ATAQAFLIALSGGLDSTVLLSLFAKLCQKQPHLPPLSIRAIHIHHGLSPNADSWAKHCQD 73 Query: 89 CCAQLGLVLQSERVQLEGVADSGVEEAARLARYAALGRLCRQQGARMLLTAHHLDDQAET 148 C Q + L ERVQ++ +G+E AR ARY A+ + + Q ML+TAHHL+DQ ET Sbjct: 74 LCDQFQIPLIIERVQVDKT--NGIEAGAREARYQAIKKYLQTQ--EMLVTAHHLNDQTET 129 Query: 149 VLLQLLRGSGLAGLSGMDRCNTAPALLGDDRLVMARPFLGVTRAQLEAVADAMSLKWIED 208 L L RGSGL GL M + L G + + RP LG TR QLE A L WI D Sbjct: 130 FFLALKRGSGLKGLGAMQQ---QSVLFG---MPILRPLLGFTRTQLENYAQKEKLNWITD 183 Query: 209 ESNSDPRYTRNALRHQVMPALGQVFPGYQQRLARAAGHAQGAQELLRE-VAEQDLAHCRE 267 ESN D RY RN LR++++P L + + + + R+A H Q+L+ + ++E HC+ Sbjct: 184 ESNEDNRYDRNFLRNEILPELRERWAHFDLAVQRSAQHCFEQQQLINDLLSEIFTEHCQI 243 Query: 268 DDHLRMPPLRELSEQRFLNLMRHWFGLRGMRMPSAAWMQEMRHQLLQADVEAQLCVSHPD 327 + ++ R+ S + L+R W + MPS + ++ + ++ A EA + Sbjct: 244 KNQFKLCQFRQYSLAKQTALLRMWLAENQLEMPSKRQLTQLINDVIFAKEEANPQFQLVN 303 Query: 328 GEVHRYRERVFLAPRRMPPDEGAVATLHWDGQAQWRLPAWYGTLHFDRIGGDDARPGFDL 387 + RY++ ++L P + TL + Q LP G L + Sbjct: 304 KVIRRYQDSLYLTK---PFSDLTKCTLKLE-QNTLNLPDDLGNL-----TVQENEHNLIF 354 Query: 388 AW------LQGQSLLACGRSGGE-RIRLAANRPARSLKQQYQSADVPAWERPYLPLVWAG 440 W L+ +L R G +++ RP +K+ +Q VP WER +PL++ G Sbjct: 355 YWQDYSVTLEKTNLPISIRFGYSGKVKHYPKRPREDIKKIWQELGVPPWERNRIPLIFYG 414 Query: 441 ESLLFAAGI 449 L A G Sbjct: 415 NELKSAVGF 423 >STM0236 [D] COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control Sty Salmonella typhimurium LT2 Length = 430 Score = 203 bits (517), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 157/422 (37%), Positives = 211/422 (50%), Gaps = 35/422 (8%) Query: 36 LAVAYSGGLDSTVLLWVAAQWARENGSTSRLAPLHVHHGLSPHADAWLAHAQACCAQLGL 95 + A+SGGLDSTVLL W RE L +H+HHGLSPHAD+W+ H + C + + Sbjct: 16 ILAAFSGGLDSTVLLHQLVLW-RERHPDVTLRAIHIHHGLSPHADSWVRHCETVCERWQV 74 Query: 96 VLQSERVQLEGVADSG--VEEAARLARYAALGRLCRQQGARMLLTAHHLDDQAETVLLQL 153 L ERV L AD+G +E AR ARY A + +L TA HLDDQ ET LL L Sbjct: 75 PLVVERVTL---ADNGLGIEAHAREARYRAFAQTLLP--GEVLATAQHLDDQCETFLLAL 129 Query: 154 LRGSGLAGLSGM-DRCNTAPALLGDDRLVMARPFLGVTRAQLEAVADAMSLKWIEDESNS 212 RGSG AGLS M +R A LL RP L TR LE A L WIEDESN Sbjct: 130 KRGSGPAGLSAMGERSPFAGTLL-------LRPLLRETRKTLEQWAVRHGLCWIEDESNQ 182 Query: 213 DPRYTRNALRHQVMPALGQVFPGYQQRLARAAGHAQGAQELLREVAEQDLAHC-REDDHL 271 D Y RN LR + +P L Q +P + +AR+A + LL E+ DL C + L Sbjct: 183 DDAYDRNFLRLRALPLLQQRWPHFPAAVARSATLCAEQERLLDELLASDLTDCITAEGTL 242 Query: 272 RMPPLRELSEQRFLNLMRHWFGLRGMRMPSAAWMQEMRHQLLQADVEAQLCVSHPDGEVH 331 R+ PL +S+ R ++R W +R MPS ++ + ++ A +A C+ D E+ Sbjct: 243 RLSPLMSMSDVRRAAILRRWLAMRNAPMPSRDALERIWQEVALARDDASPCLRFGDHEIR 302 Query: 332 RYRERVFLAPRRMPPDEGAVATLHWDGQAQWRLPAWYGTLHFDRIGGDDARP----GFDL 387 RY+ +++ E VA W Q LPA GT+ GG+ RP + Sbjct: 303 RYQSQLWWIKSVAGQHETTVAWPVW--QTPLALPAGLGTVQLVP-GGELRRPREEESVSI 359 Query: 388 AWLQGQSLLACGRSGGERIRLAANRPARSLKQQYQSADVPAWERPYLPLVWAGESLLFAA 447 + L GR+GG R LK+ +Q +P W R PL++ GE+L+ AA Sbjct: 360 RFKAPGVLHIVGRNGG-----------RKLKKIWQEQGIPPWRRDTTPLLFYGETLIAAA 408 Query: 448 GI 449 G+ Sbjct: 409 GV 410 >mesJ [D] COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control Eco Escherichia coli K12 Length = 432 Score = 197 bits (502), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 159/421 (37%), Positives = 216/421 (51%), Gaps = 33/421 (7%) Query: 36 LAVAYSGGLDSTVLLWVAAQWARENGSTSRLAPLHVHHGLSPHADAWLAHAQACCAQLGL 95 + VA+SGGLDSTVLL QW EN + L +HVHHGLS +ADAW+ H + C Q + Sbjct: 15 ILVAFSGGLDSTVLLHQLVQWRTENPGVA-LRAIHVHHGLSANADAWVTHCENVCQQWQV 73 Query: 96 VLQSERVQL--EGVADSGVEEAARLARYAALGRLCRQQGARMLLTAHHLDDQAETVLLQL 153 L ERVQL EG+ G+E AR ARY A R +L+TA HLDDQ ET LL L Sbjct: 74 PLVVERVQLAQEGL---GIEAQARQARYQAFARTLLP--GEVLVTAQHLDDQCETFLLAL 128 Query: 154 LRGSGLAGLSGMDRCNTAPALLGDDRLVMARPFLGVTRAQLEAVADAMSLKWIEDESNSD 213 RGSG AGLS M + RL+ RP L TR +L A L+WIEDESN D Sbjct: 129 KRGSGPAGLSAMAEVSE----FAGTRLI--RPLLARTRGELVQWARQYDLRWIEDESNQD 182 Query: 214 PRYTRNALRHQVMPALGQVFPGYQQRLARAAGHAQGAQELLREVAEQDLAHCRE-DDHLR 272 Y RN LR +V+P L Q +P + + AR+A + LL E+ DLAHC+ L+ Sbjct: 183 DSYDRNFLRLRVVPLLQQRWPHFAEATARSAALCAEQESLLDELLADDLAHCQSPQGTLQ 242 Query: 273 MPPLRELSEQRFLNLMRHWFGLRGMRMPSAAWMQEMRHQLLQADVEAQLCVSHPDGEVHR 332 + P+ +S+ R ++R W + MPS + + ++ A +A C+ E+ R Sbjct: 243 IVPMLAMSDARRAAIIRRWLAGQNAPMPSRDALVRIWQEVALAREDASPCLRLGAFEIRR 302 Query: 333 YRERVFLAPRRMPPDEGAVATLHWDGQAQWRLPAWYGTLHFDRIGGDDARPGFDLAW--- 389 Y+ +++ E V W + LPA G++ + GGD P D A Sbjct: 303 YQSQLWWIKSVTGQSENIVPWQTWLQPLE--LPAGLGSVQLN-AGGDIRPPRADEAVSVR 359 Query: 390 LQGQSLL-ACGRSGGERIRLAANRPARSLKQQYQSADVPAWERPYLPLVWAGESLLFAAG 448 + LL GR+GG R LK+ +Q VP W R PL++ GE+L+ AAG Sbjct: 360 FKAPGLLHIVGRNGG-----------RKLKKIWQELGVPPWLRDTTPLLFYGETLIAAAG 408 Query: 449 I 449 + Sbjct: 409 V 409