BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0005.0113.p (280 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1384 [E] COG2362 D-aminopeptidase Rso Ralstonia solanacearum 325 5e-89 lin0201 [E] COG2362 D-aminopeptidase Lin Listeria innocua 119 9e-27 BS_dppA [E] COG2362 D-aminopeptidase Bsu Bacillus subtilis 118 1e-26 DR1843 [E] COG2362 D-aminopeptidase Dra Deinococcus radiodurans 112 8e-25 mll6661 Non COG 90 6e-18 >RSc1384 [E] COG2362 D-aminopeptidase Rso Ralstonia solanacearum Length = 271 Score = 325 bits (834), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 169/274 (61%), Positives = 198/274 (72%), Gaps = 5/274 (1%) Query: 7 ILVSVDIEGVAGVFHPEQTRAGNGEYERARRWMTEEANAVIRGALAAGATAIKVNDSHGG 66 IL+S DIEGVA VFHPEQTRAGN EYERARRWMT EA+A +RGA GAT + VNDSHGG Sbjct: 3 ILISADIEGVANVFHPEQTRAGNAEYERARRWMTAEADAAVRGAFEGGATEVIVNDSHGG 62 Query: 67 FRNLLPDLLHPQARMVLGKPRVLGMMGGVDHDIDAVMLVGYHSRAQGRGILAHTTNSFAF 126 FRNL+PD + +AR VLGKPR LGMM GV+ DAV ++GYH+RA RG LAHT NSFAF Sbjct: 63 FRNLVPDWMDARARFVLGKPRHLGMMAGVE-GCDAVCMIGYHARAGSRGTLAHTINSFAF 121 Query: 127 ARVWLDGQEMGEAGLYGALAAEHGAPVIFGSGDDAFIEENQPLFAHAVFAETKKAYGANS 186 ARVWL+ QE+GEAGLYGALA E G PV SGDD F+ E PL H F +TK+A G N+ Sbjct: 122 ARVWLNEQELGEAGLYGALAGERGVPVAVASGDDVFVNETLPLLPHTTFVQTKQAEGMNA 181 Query: 187 GDSLTPQQSCTLLEARAQQAVATWLAHPQAMPARPLRGPLRCRLQAQTVALADLFSQLPI 246 G SL+ +Q+C + A + AV H MP R ++ P+ CRLQ QT ALADLF Q P Sbjct: 182 GMSLSSEQACDAILAAVRSAVQR--GH-FGMPLR-IQPPIVCRLQTQTPALADLFCQWPA 237 Query: 247 LERCDNVSVEFDAPTAEYAVRVLNSLSAMSAMLR 280 LER D + F A + E+AVR+LNSLSAMS MLR Sbjct: 238 LERVDGTLLRFAADSVEHAVRMLNSLSAMSFMLR 271 >lin0201 [E] COG2362 D-aminopeptidase Lin Listeria innocua Length = 272 Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 83/272 (30%), Positives = 136/272 (50%), Gaps = 16/272 (5%) Query: 9 VSVDIEGVAGVFHPEQTRAGNG--EYERARRWMTEEANAVIRGALAAGATAIKVNDSHGG 66 +SVD+EG+ G+ P+ T + Y R ++ MTEE N V+ AL AG + VNDSH Sbjct: 5 ISVDMEGINGL--PDDTFVDSSMRNYTRGQKIMTEETNWVVEEALKAGYDDVIVNDSHSK 62 Query: 67 FRNLLPDLLHPQARMVLGKPRVLGMMGGVDHDIDAVMLVGYHSRAQGRGILAHTTNSFAF 126 N+L + LH +AR++ G + M+ G+D DA + +GYHSRA G+++H+ S Sbjct: 63 MNNILIEDLHEEARLITGDVKPFSMVQGLDSSADAAVFIGYHSRAGQPGVMSHSMIS-GV 121 Query: 127 ARVWLDGQEMGEAGLYGALAAEHGAPVIFGSGDDAFIEENQPLFAHAVFAETKKAYGANS 186 +++ +GE GL +A +G PVI SGDD E + L A K+A +S Sbjct: 122 RNFYINDVVIGEFGLNAYVAGAYGVPVILVSGDDYIAREAKELIPGIETAVVKEAVSRSS 181 Query: 187 GDSLTPQQSCTLLEARAQQAVATWLAHPQAMPARPLRGPLRCRLQAQTVALADLFSQLPI 246 + + ++ ++ ++ VA L H QA P + +++ A+ + +P Sbjct: 182 AVAFSKSKAEKII----REKVALSLNHKQAAVLVPPEKTV-LKIEFCNYGQAEWAALVPR 236 Query: 247 LERCDNVSVEFDAPTAEYAVRVLNSLSAMSAM 278 + D +V F+A +L + AM AM Sbjct: 237 TKIIDETTVVFEAED------ILEAYQAMVAM 262 >BS_dppA [E] COG2362 D-aminopeptidase Bsu Bacillus subtilis Length = 274 Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 67/218 (30%), Positives = 111/218 (50%), Gaps = 2/218 (0%) Query: 6 NILVSVDIEGVAGVFHPEQTRAGNGEYERARRWMTEEANAVIRGALAAGATAIKVNDSHG 65 + +SVD+EG++G+ +G YER R MTEEAN I A +G T + VNDSH Sbjct: 2 KLYMSVDMEGISGLPDDTFVDSGKRNYERGRLIMTEEANYCIAEAFNSGCTEVLVNDSHS 61 Query: 66 GFRNLLPDLLHPQARMVLGKPRVLGMMGGVDHDIDAVMLVGYHSRAQGRGILAHTTNSFA 125 NL+ + LHP+A ++ G + M+ G+D + +GYH+RA G+++H+ F Sbjct: 62 KMNNLMVEKLHPEADLISGDVKPFSMVEGLDDTFRGALFLGYHARASTPGVMSHSM-IFG 120 Query: 126 FARVWLDGQEMGEAGLYGALAAEHGAPVIFGSGDDAFIEENQPLFAHAVFAETKKAYGAN 185 +++ + +GE GL +A + PV+ +GDD +E + L + A K+ + Sbjct: 121 VRHFYINDRPVGELGLNAYVAGYYDVPVLMVAGDDRAAKEAEELIPNVTTAAVKQTISRS 180 Query: 186 SGDSLTPQQSCTLLEARAQQAVATW-LAHPQAMPARPL 222 + L+P + LL + A+ P P RP+ Sbjct: 181 AVKCLSPAKRGRLLTEKTAFALQNKDKVKPLTPPDRPV 218 >DR1843 [E] COG2362 D-aminopeptidase Dra Deinococcus radiodurans Length = 283 Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 99/281 (35%), Positives = 142/281 (50%), Gaps = 15/281 (5%) Query: 6 NILVSVDIEGVAGVFH------PEQTRAGNG-EYERARRWMTEEANAVIRGALAAGATAI 58 +++SVD+EGV GV PE NG EYE+AR MT EA A GA AAGA+ + Sbjct: 2 KVVISVDMEGVCGVASWVQVSPPEFGGLVNGAEYEKARVQMTREAAAAAEGAFAAGASDV 61 Query: 59 KVNDSHGGFRNLLPDLLHPQARMVLGKPRVLGMMGGVDHD-IDAVMLVGYHSRAQG-RGI 116 VNDSH RNLLP+LL + R G + L M+ GV + + A++LVG H+RA RG Sbjct: 62 LVNDSHDTMRNLLPELLPERVRYTTGNDKPLSMVQGVQEEGVGALLLVGSHARAGSMRGP 121 Query: 117 LAHTTNSFAFARVWLDGQEMGEAGLYGALAAEHGAPVIFGSGDDAFIEENQPLFAHAV-F 175 LAHT N F V + G + GE GL LA +G PV F SGDD + E + V Sbjct: 122 LAHTWNGF-IRNVRIGGVDTGEYGLNALLAGHYGVPVAFASGDDVAMGEIRAELGEGVET 180 Query: 176 AETKKAYGANSGDSLTPQQSCTLLEARAQQAVATWLAHPQAMPARPLRGPLRCRLQAQTV 235 K+ + + L P ++ + A A+ V ++ R P C+L Sbjct: 181 VAVKEGLSSFAAIHLHPAEAVRRIRAGAEAGV----RRAASLAPYTTRWPAPCQLSFDHQ 236 Query: 236 ALADLFSQLPILERCDNVSVEFDAPTAEYAVRVLNSLSAMS 276 A AD ++P + R D V+V +++ A + + L+ ++ Sbjct: 237 ARADACERVPGVTRVDAVTVGWESENAYHLFQTFRLLAKVA 277 >mll6661 Non COG Length = 265 Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 64/191 (33%), Positives = 94/191 (49%), Gaps = 8/191 (4%) Query: 6 NILVSVDIEGVAGVFHPEQTRAGNGEYERARRWMTEEANAVIRGALAAGATAIKVNDSHG 65 + +S DIEG AG+ + ++ + GN +Y R +MT+E A GA AAGAT + V D+H Sbjct: 2 KVFISADIEGTAGITNWDEAKKGNPDYAEFREYMTDELVAACEGARAAGATEVVVKDAHS 61 Query: 66 GFRNLLPDLLHPQARMV---LGKPRVLGMMGGVDHDIDAVMLVGYHSRA-QGRGILAHTT 121 RNL+ L R+V G P + MM G+D A + GYH++A LAHT Sbjct: 62 TARNLILSKLPDYVRIVRGWSGHPDM--MMFGIDISFAAALYTGYHNKAGTDTNPLAHTL 119 Query: 122 NSFAFARVWLDGQEMGEAGLYGALAAEHGAPVIFGSGDDAFIEENQPLFAHAVFAETKKA 181 +R+ ++G+ E L AA + P F SGD + + L T + Sbjct: 120 TG-TVSRLLINGEVASEYTLNALCAARYRVPSAFLSGDAGMCADAKVLVPAIGTVATSEG 178 Query: 182 YGANSGDSLTP 192 +G + SLTP Sbjct: 179 FGPATS-SLTP 188