BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0005.0110.p         (49 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

yliC [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel transpo...    90   1e-18
Z1055 [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel transp...    90   1e-18
ECs0910 [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel tran...    90   1e-18
STM0850 [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel tran...    88   4e-18
RSc1381 [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel tran...    87   6e-18

>yliC [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel transport
           systems, permease components Eco Escherichia coli K12
          Length = 306

 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 43/49 (87%), Positives = 47/49 (95%)

Query: 1   MGRLLVDAVEMRDYPVIQAEILLFSLEFIFINLVVDVLYAVINPSIRFK 49
           +GRLLVD+VEMRDYPVIQAEILLFSLEFI INLVVDVLYA INP+IR+K
Sbjct: 258 LGRLLVDSVEMRDYPVIQAEILLFSLEFILINLVVDVLYAAINPAIRYK 306


>Z1055 [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel transport
           systems, permease components EcZ Escherichia coli
           O157:H7 EDL933
          Length = 306

 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 43/49 (87%), Positives = 47/49 (95%)

Query: 1   MGRLLVDAVEMRDYPVIQAEILLFSLEFIFINLVVDVLYAVINPSIRFK 49
           +GRLLVD+VEMRDYPVIQAEILLFSLEFI INLVVDVLYA INP+IR+K
Sbjct: 258 LGRLLVDSVEMRDYPVIQAEILLFSLEFILINLVVDVLYAAINPAIRYK 306


>ECs0910 [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel transport
           systems, permease components Ecs Escherichia coli
           O157:H7
          Length = 306

 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 43/49 (87%), Positives = 47/49 (95%)

Query: 1   MGRLLVDAVEMRDYPVIQAEILLFSLEFIFINLVVDVLYAVINPSIRFK 49
           +GRLLVD+VEMRDYPVIQAEILLFSLEFI INLVVDVLYA INP+IR+K
Sbjct: 258 LGRLLVDSVEMRDYPVIQAEILLFSLEFILINLVVDVLYAAINPAIRYK 306


>STM0850 [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel transport
           systems, permease components Sty Salmonella typhimurium
           LT2
          Length = 306

 Score = 88.2 bits (217), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 41/49 (83%), Positives = 47/49 (95%)

Query: 1   MGRLLVDAVEMRDYPVIQAEILLFSLEFIFINLVVDVLYAVINPSIRFK 49
           +GRLLVD+V+MRDYPVIQAE+LLFSLEFI INLVVDVLYA INP+IR+K
Sbjct: 258 LGRLLVDSVDMRDYPVIQAEVLLFSLEFILINLVVDVLYAAINPAIRYK 306


>RSc1381 [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel transport
           systems, permease components Rso Ralstonia solanacearum
          Length = 307

 Score = 87.4 bits (215), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 41/48 (85%), Positives = 46/48 (95%)

Query: 1   MGRLLVDAVEMRDYPVIQAEILLFSLEFIFINLVVDVLYAVINPSIRF 48
           +GRLLVDAVEMRDYPVIQAE+LLFSLEFI INLVVD+LY VINP+IR+
Sbjct: 258 LGRLLVDAVEMRDYPVIQAEVLLFSLEFILINLVVDILYTVINPTIRY 305