BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0005.0108.p         (120 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PA2045 [S] COG0759 Uncharacterized conserved protein Pae Pseudom...    95   3e-20
RSc0003 [S] COG0759 Uncharacterized conserved protein Rso Ralsto...    90   1e-18
BS_ytjA [S] COG0759 Uncharacterized conserved protein Bsu Bacill...    87   8e-18
FN0003 [S] COG0759 Uncharacterized conserved protein Fnu Fusobac...    86   1e-17
lin1778 [S] COG0759 Uncharacterized conserved protein Lin Lister...    84   1e-16

>PA2045 [S] COG0759 Uncharacterized conserved protein Pae Pseudomonas
          aeruginosa
          Length = 86

 Score = 95.1 bits (235), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 42/73 (57%), Positives = 51/73 (69%)

Query: 1  MKTPLLLLLRAYKLGVSPFLGQNCRFYPSCSDYAAEAVRVHGALKGSLLAGKRLCKCHPW 60
          MK  L+ L+R Y+  +SP +G  CRFYPSCS Y  EA+RVHGAL+G  L  +RL +CHPW
Sbjct: 1  MKFLLIGLIRFYQYAISPLIGPRCRFYPSCSHYTLEAIRVHGALRGGYLGARRLLRCHPW 60

Query: 61 HPGGLDLVPGSPE 73
          HPGG D VP   E
Sbjct: 61 HPGGYDPVPERQE 73


>RSc0003 [S] COG0759 Uncharacterized conserved protein Rso Ralstonia
           solanacearum
          Length = 104

 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 48/100 (48%), Positives = 60/100 (60%), Gaps = 2/100 (2%)

Query: 1   MKTPLLLLLRAYKLGVSPFLGQNCRFYPSCSDYAAEAVRVHGALKGSLLAGKRLCKCHPW 60
           M   LL LLR YK+  SPF+G  CRF P+CSDYA +AV  HG   GS LA KRLC+CHP+
Sbjct: 1   MTRVLLFLLRVYKVAFSPFVGAQCRFLPTCSDYARDAVLTHGPAIGSYLAAKRLCRCHPF 60

Query: 61  HPGGLDLVPGSPEARAHAMAQFCGASSSDSSGSSNSPLPS 100
             GG D VP  P A   A+     AS+  ++  + +  PS
Sbjct: 61  AQGGYDPVP--PAAGDAALRSTDSASTETTAADAPAARPS 98


>BS_ytjA [S] COG0759 Uncharacterized conserved protein Bsu Bacillus
          subtilis
          Length = 75

 Score = 87.4 bits (215), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 38/69 (55%), Positives = 48/69 (69%)

Query: 1  MKTPLLLLLRAYKLGVSPFLGQNCRFYPSCSDYAAEAVRVHGALKGSLLAGKRLCKCHPW 60
          MKT  + L+R Y+  +SP     CRFYP+CS Y  EA++ HGALKG  L  KR+ KCHP+
Sbjct: 1  MKTLFIALIRGYQKFISPLTPPTCRFYPTCSQYGIEAIKTHGALKGGWLTIKRILKCHPF 60

Query: 61 HPGGLDLVP 69
          HPGG+D VP
Sbjct: 61 HPGGVDPVP 69


>FN0003 [S] COG0759 Uncharacterized conserved protein Fnu Fusobacterium
          nucleatum
          Length = 82

 Score = 86.3 bits (212), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 36/69 (52%), Positives = 48/69 (69%)

Query: 1  MKTPLLLLLRAYKLGVSPFLGQNCRFYPSCSDYAAEAVRVHGALKGSLLAGKRLCKCHPW 60
          MK  L+LL+R Y+  +SP     CRFYP+CS Y  EA++ HG +KG+ LA +R+ KCHP+
Sbjct: 1  MKKILILLIRFYQKFISPMFPAKCRFYPTCSQYTLEAIKEHGTIKGTYLAIRRILKCHPF 60

Query: 61 HPGGLDLVP 69
          H GG D VP
Sbjct: 61 HEGGYDPVP 69


>lin1778 [S] COG0759 Uncharacterized conserved protein Lin Listeria
          innocua
          Length = 88

 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 38/69 (55%), Positives = 47/69 (68%)

Query: 1  MKTPLLLLLRAYKLGVSPFLGQNCRFYPSCSDYAAEAVRVHGALKGSLLAGKRLCKCHPW 60
          MK  L+  +R Y+  +S F    CRFYP+CS Y  EA+  HGALKGS LA +R+ KCHP+
Sbjct: 1  MKKMLIGGIRLYQKYISRFTPATCRFYPTCSAYGIEAIETHGALKGSYLAIRRISKCHPF 60

Query: 61 HPGGLDLVP 69
          H GGLD VP
Sbjct: 61 HKGGLDFVP 69