BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0005.0099.p         (172 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mll1685 [GEPR] COG0477 Permeases of the major facilitator superf...   233   1e-61
SMb20272 [GEPR] COG0477 Permeases of the major facilitator super...    71   1e-12
mlr2429 [GEPR] COG0477 Permeases of the major facilitator superf...    69   4e-12

>mll1685 [GEPR] COG0477 Permeases of the major facilitator superfamily Mlo
           Mesorhizobium loti
          Length = 469

 Score =  233 bits (595), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 117/161 (72%), Positives = 138/161 (85%), Gaps = 1/161 (0%)

Query: 1   MAMPQVHIVAYCGDLGYGPARGAQMLSLMLACGVVSRLVSGAICDRIGGLRTLLLGSMLQ 60
           M+MPQVHIVAYC DLGYG A GA MLS+M+A GVVSRL SG + DRIGG++TLL+GS+LQ
Sbjct: 298 MSMPQVHIVAYCMDLGYGMAHGADMLSIMMAAGVVSRLASGFVADRIGGVKTLLIGSVLQ 357

Query: 61  GLSLLLFIPFDSLASLYLISALFGLFQGGIVPSYAIIVREYFPAAEAGQRVGAVIMATMF 120
            LSLL +IPFD LASLY++S +FGL QGGIVP YAIIVREY PA EAGQR+G V+MAT+F
Sbjct: 358 CLSLLFYIPFDGLASLYVVSLVFGLSQGGIVPCYAIIVREYLPAKEAGQRIGIVMMATIF 417

Query: 121 GMALGGWVSGKIFDMTGSYHAAFANGIAWNLLNL-AIALFL 160
           GMA+GGW+SG I+D+TGSY  AF NGIAWNLLN+ AI LF+
Sbjct: 418 GMAIGGWMSGWIYDLTGSYAVAFLNGIAWNLLNIGAIGLFM 458


>SMb20272 [GEPR] COG0477 Permeases of the major facilitator superfamily Sme
           Sinorhizobium meliloti
          Length = 402

 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/136 (33%), Positives = 65/136 (47%)

Query: 4   PQVHIVAYCGDLGYGPARGAQMLSLMLACGVVSRLVSGAICDRIGGLRTLLLGSMLQGLS 63
           P  H V+Y    G        + SL    G+  R+  G + DR G  R L+ G +LQ   
Sbjct: 233 PIFHTVSYAVSCGIPMMAAVSIYSLEGLAGMGGRVAFGVLGDRYGAKRILVSGLLLQAFG 292

Query: 64  LLLFIPFDSLASLYLISALFGLFQGGIVPSYAIIVREYFPAAEAGQRVGAVIMATMFGMA 123
            L +     L + Y ++A+FG    G++P YA+I RE FP    G  +G   MA   GMA
Sbjct: 293 ALAYFFVRDLGAFYAVAAVFGFIYAGVMPLYAVIARENFPLRMMGTVIGGTAMAGSLGMA 352

Query: 124 LGGWVSGKIFDMTGSY 139
           +G    G I+D+  SY
Sbjct: 353 IGPVAGGLIYDVFASY 368


>mlr2429 [GEPR] COG0477 Permeases of the major facilitator superfamily Mlo
           Mesorhizobium loti
          Length = 400

 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 71/140 (50%)

Query: 4   PQVHIVAYCGDLGYGPARGAQMLSLMLACGVVSRLVSGAICDRIGGLRTLLLGSMLQGLS 63
           P  H+V+Y    G  P     + S+    G+  RL+ G + DR+G    L+ G ++Q + 
Sbjct: 233 PIFHMVSYAMLCGVAPMAAVTIYSVEGLAGLGGRLLYGVLADRLGVKPVLITGLVIQAVV 292

Query: 64  LLLFIPFDSLASLYLISALFGLFQGGIVPSYAIIVREYFPAAEAGQRVGAVIMATMFGMA 123
           +  ++    L   Y+++ +FG   GG++P YA++ REYF     G   GA  M +  GMA
Sbjct: 293 IAAYLSVSQLDQFYVLAVIFGATYGGVMPLYAVLAREYFGQRILGTVFGAATMLSSLGMA 352

Query: 124 LGGWVSGKIFDMTGSYHAAF 143
           LG    G +FD   SYH  F
Sbjct: 353 LGPLAGGMVFDAYASYHWLF 372