BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0005.0070.p         (189 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mll1989_1 [T] COG2206 HD-GYP domain Mlo Mesorhizobium loti             62   7e-10

>mll1989_1 [T] COG2206 HD-GYP domain Mlo Mesorhizobium loti
          Length = 422

 Score = 62.0 bits (149), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 69/159 (43%), Gaps = 34/159 (21%)

Query: 25  LALAGDLSMGQPPDQSVRAARLAVRLAQLQGADESAARHAALVSLLRWSGCTANAAGFAT 84
           LA A DL+ G   D ++++  LA+R+A+L G  +   R+A   S+LR+ GC A+    + 
Sbjct: 15  LAYASDLATGHSRDFALKSCVLAMRIAELAGVSDEVRRNAYHQSMLRYVGCNADTDLLSA 74

Query: 85  LLGDDVGGREAMLRQGLPEGHPLNFANIA------------------------------- 113
             GD++  R+ ++  GL  G+      +                                
Sbjct: 75  TFGDEIALRQDLV--GLDMGNRAELGRVFVQAFKRFYYDLEPDAQARAIEAAMSQALAVA 132

Query: 114 -PLAHIHCEVAGEVAALLGLPGPVETGLRHVWEHYDGSG 151
            P+   HCEVA  + A LGL   +   L  ++E +DG G
Sbjct: 133 RPVLTAHCEVAQRIGARLGLSDEIRRNLGQIYERWDGKG 171