BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0005.0027.p         (195 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Cj1424c [G] COG0279 Phosphoheptose isomerase Cje Campylobacter j...   190   2e-48
CAC3054 [G] COG0279 Phosphoheptose isomerase Cac Clostridium ace...   184   1e-46
aq_908 [G] COG0279 Phosphoheptose isomerase Aae Aquifex aeolicus      171   6e-43
HP0857 [G] COG0279 Phosphoheptose isomerase Hpy Helicobacter pyl...   159   4e-39
Cj1149c [G] COG0279 Phosphoheptose isomerase Cje Campylobacter j...   158   8e-39

>Cj1424c [G] COG0279 Phosphoheptose isomerase Cje Campylobacter jejuni
          Length = 201

 Score =  190 bits (482), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 90/181 (49%), Positives = 121/181 (66%)

Query: 15  SIRAKQQLMQESATLAVFDAAVAATIAAYRNGRRIYIAGNGGSAADAQHLAAEFVSKLAR 74
           SI  K+Q++++   + +   A    I AY+NG +  +AGNGGSAADAQH+A EFVS+   
Sbjct: 15  SILVKEQILKDENLITLIKNASLEVIKAYKNGNKTLLAGNGGSAADAQHIAGEFVSRFYF 74

Query: 75  DRAPLPAEALTTDSSILTAIGNDYGYEQVFSRQLAGKAVAGDIFLGITTSGRSPNILRAL 134
           DR  + + ALTTD+SILTAIGNDYGYE +F+RQ+  + V GD+F+GI+TSG S NIL+AL
Sbjct: 75  DRPGIASIALTTDTSILTAIGNDYGYENLFARQVQAQGVKGDVFIGISTSGNSKNILKAL 134

Query: 135 EQCRAMGVPSILFTGRDGGPARPLADHAIVVPGEATSTIQELHIVLAHTLCESVEAALFG 194
           E C+   + SI  +G  GG    L D+ I VP   T  IQE HI++ H +C  VE  LFG
Sbjct: 135 EFCKQKEIISIGLSGASGGAMNELCDYCIKVPSTCTPRIQEAHILIGHIICAIVEEELFG 194

Query: 195 E 195
           +
Sbjct: 195 K 195


>CAC3054 [G] COG0279 Phosphoheptose isomerase Cac Clostridium acetobutylicum
          Length = 196

 Score =  184 bits (466), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 81/188 (43%), Positives = 125/188 (66%)

Query: 8   LQRNLDASIRAKQQLMQESATLAVFDAAVAATIAAYRNGRRIYIAGNGGSAADAQHLAAE 67
           ++  + +SI AK++++++   +    + V   I AY+ G+++ + GNGGSAAD+QH+AAE
Sbjct: 5   IEAQIKSSIEAKEKILKDGQYIEQIQSIVEIVIQAYKLGKKVLLCGNGGSAADSQHIAAE 64

Query: 68  FVSKLARDRAPLPAEALTTDSSILTAIGNDYGYEQVFSRQLAGKAVAGDIFLGITTSGRS 127
           FVSK   DR  LPA ALT ++S+LT+IGNDY Y+ +F RQ+      GD+ +GI+TSG S
Sbjct: 65  FVSKFRLDRKALPAIALTVNTSVLTSIGNDYSYKNIFERQVEAFGKEGDVLIGISTSGNS 124

Query: 128 PNILRALEQCRAMGVPSILFTGRDGGPARPLADHAIVVPGEATSTIQELHIVLAHTLCES 187
            NI  A ++ + +G+ +I F G+DGG  +   D  ++VP E T  +QE HI++ H +C+ 
Sbjct: 125 ENITLAFKKAKEIGITTIGFLGKDGGENKNYCDFPLIVPSEDTPRVQEAHIMIGHIVCDI 184

Query: 188 VEAALFGE 195
           VE  LFGE
Sbjct: 185 VEKELFGE 192


>aq_908 [G] COG0279 Phosphoheptose isomerase Aae Aquifex aeolicus
          Length = 191

 Score =  171 bits (434), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 81/155 (52%), Positives = 108/155 (69%), Gaps = 1/155 (0%)

Query: 36  VAATIA-AYRNGRRIYIAGNGGSAADAQHLAAEFVSKLARDRAPLPAEALTTDSSILTAI 94
           VA  IA A ++G ++ + GNGGSAADAQH+AAE V +  ++R PLPA ALTTD+SILTA+
Sbjct: 30  VAGIIATALKDGNKVLLFGNGGSAADAQHIAAELVGRFKKERRPLPAIALTTDTSILTAL 89

Query: 95  GNDYGYEQVFSRQLAGKAVAGDIFLGITTSGRSPNILRALEQCRAMGVPSILFTGRDGGP 154
           GNDYG+E +F RQ+    + GD+ +GITTSG S N++R L++   +G  +I FTGR+GG 
Sbjct: 90  GNDYGFETIFERQVEALCMPGDVAIGITTSGNSENVIRGLKKAHDLGATTIAFTGRNGGK 149

Query: 155 ARPLADHAIVVPGEATSTIQELHIVLAHTLCESVE 189
              +A +  +VP   T  IQE HI L H LCE VE
Sbjct: 150 VAQIAHYTFIVPSYETQRIQECHITLGHVLCELVE 184


>HP0857 [G] COG0279 Phosphoheptose isomerase Hpy Helicobacter pylori 26695
          Length = 192

 Score =  159 bits (402), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 76/178 (42%), Positives = 111/178 (62%), Gaps = 9/178 (5%)

Query: 12  LDASIRAKQQLMQESATLAVFDAAVAATIAAYRNGRRIYIAGNGGSAADAQHLAAEFVSK 71
           L+ S+   Q+ +++S  L          I    N  +I I GNGGSA+DAQH AAE   +
Sbjct: 17  LEKSLEGLQEALKQSVHL---------LIETLENQGKILICGNGGSASDAQHFAAELTGR 67

Query: 72  LARDRAPLPAEALTTDSSILTAIGNDYGYEQVFSRQLAGKAVAGDIFLGITTSGRSPNIL 131
              +R  L A +L TD S LTAI NDYGYE+VF+RQ+    V  D+ +GI+TSG S N+L
Sbjct: 68  YKLERKGLSAISLNTDISALTAIANDYGYEEVFARQVEALGVKNDVLIGISTSGNSKNVL 127

Query: 132 RALEQCRAMGVPSILFTGRDGGPARPLADHAIVVPGEATSTIQELHIVLAHTLCESVE 189
           +A E+ + + + ++   GRDGG  +PL+D A++VP + T  IQE+HI++ H LC+ +E
Sbjct: 128 KAYEKAKDLEMKTLSLAGRDGGKMKPLSDMALIVPSDDTPRIQEMHILMIHILCDCIE 185


>Cj1149c [G] COG0279 Phosphoheptose isomerase Cje Campylobacter jejuni
          Length = 186

 Score =  158 bits (399), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 76/182 (41%), Positives = 115/182 (63%), Gaps = 1/182 (0%)

Query: 12  LDASIRAKQQLMQESATLAVFDAAVAATIA-AYRNGRRIYIAGNGGSAADAQHLAAEFVS 70
           ++   +  Q+++Q S  L    A V   +    + G +I I GNGGSAADAQH AAE   
Sbjct: 5   VEKEWQEHQKIVQASEILKGQIAKVGELLCECLKKGGKILICGNGGSAADAQHFAAELSG 64

Query: 71  KLARDRAPLPAEALTTDSSILTAIGNDYGYEQVFSRQLAGKAVAGDIFLGITTSGRSPNI 130
           +  ++R  L   ALTTD+S L+AIGNDYG+E VFSRQ+       D+ +GI+TSG+SPN+
Sbjct: 65  RYKKERKALAGIALTTDTSALSAIGNDYGFEFVFSRQVEALGNEKDVLIGISTSGKSPNV 124

Query: 131 LRALEQCRAMGVPSILFTGRDGGPARPLADHAIVVPGEATSTIQELHIVLAHTLCESVEA 190
           L AL++ + + +  +  +G+ GG    L DH +VVP + T+ IQE+HI++ HTLC+ ++ 
Sbjct: 125 LEALKKAKELNMLCLGLSGKGGGMMNKLCDHNLVVPSDDTARIQEMHILIIHTLCQIIDE 184

Query: 191 AL 192
           + 
Sbjct: 185 SF 186