BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0004.0023.p         (323 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mlr4903 [Q] COG0412 Dienelactone hydrolase and related enzymes M...   137   4e-32
RSc0055 [Q] COG0412 Dienelactone hydrolase and related enzymes R...   124   2e-28
AGl2363 [Q] COG0412 Dienelactone hydrolase and related enzymes A...   117   3e-26
CC0087 Non COG                                                         65   2e-10

>mlr4903 [Q] COG0412 Dienelactone hydrolase and related enzymes Mlo
           Mesorhizobium loti
          Length = 287

 Score =  137 bits (344), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 93/231 (40%), Positives = 122/231 (52%), Gaps = 16/231 (6%)

Query: 54  KGPYPTVIALHGCGGLYSIVKDGRGEFTPRHLAMARVLTDAGYNVLFPDSFTPRGRRSTC 113
           +GP+P V+A+HGC GL+S       E +PRH    R L   GY V+FPDSF  R     C
Sbjct: 54  QGPFPAVVAMHGCSGLWS--SKNSAELSPRHADWGRRLAALGYVVIFPDSFGSRDLGPQC 111

Query: 114 QDTVAQREISAMNRRF-DVQAAMRWVTTQPDVDVKRIALLGWSHGASTVLASLNLAETDV 172
           ++    RE+     R  D  AA R++     V    IALLGWS+G STVL ++   +T  
Sbjct: 112 KN--GDREVEPYRERVEDANAARRYLQALAYVKPAAIALLGWSNGGSTVLYTVRPKDTP- 168

Query: 173 AVRKIQP--RAAVAFYPDCRPYAKPSEPFKPAAPLLILMGENDDWTPPQACEAIEQKMQG 230
             +   P  RAAVAFYP C   A+  + +    PLLI+MGE DDWTP + C+A+      
Sbjct: 169 --KPDSPDFRAAVAFYPGCTAPAEKGD-WATRVPLLIVMGEADDWTPAKPCKALADANPD 225

Query: 231 SDTELALRLYPDTYHDFDAPGLPVHVRMDVAGVGKRGEGVT-SGANPDAXA 280
           S   + L LYP  YHDFD     +H    +A     G+GV  +G NP A A
Sbjct: 226 S---VKLILYPGAYHDFDNEAQKLHELHGLAYTAN-GDGVAHAGLNPAARA 272


>RSc0055 [Q] COG0412 Dienelactone hydrolase and related enzymes Rso
           Ralstonia solanacearum
          Length = 325

 Score =  124 bits (312), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/220 (38%), Positives = 111/220 (50%), Gaps = 9/220 (4%)

Query: 63  LHGCGGLYSIVKDGRGEFTPRHLAMARVLTDAGYNVLFPDSFTPRGR-RSTCQDTVAQRE 121
           LHGCGGLY+           R+   A+ L   GY V+ PDSF PRG+    C +  A R 
Sbjct: 94  LHGCGGLYTPAGADAMALGERYRGYAQWLAARGYAVVLPDSFGPRGKPHGICTEPTAGRS 153

Query: 122 ISAMNRRFDVQAAMRWVTTQPDVDVKRIALLGWSHGASTVLASLNLAETDVAVRKIQPRA 181
           I    RR D+ A +RW+  QP +D + I LLGWS+GA  VL +++ + T  A      R 
Sbjct: 154 IDGAARRADILATLRWIAAQPGLDTRHIVLLGWSNGAQAVLDTVDASRTWPAGTPDVER- 212

Query: 182 AVAFYPDCRPYAKPSEP-FKPAAPLLILMGENDDWTPPQACEAIEQKMQGSDTE--LALR 238
           AVAF P C   A    P ++  APLL+L G  DDWTP   C+A++  +     +   AL 
Sbjct: 213 AVAFDPGC--LAALRRPAYRLNAPLLLLAGAYDDWTPADRCQALQSAVLARQPQARFALE 270

Query: 239 LYPDTYHDFDAPGLPVHVRMDVAGVGKRGEGVTSGANPDA 278
               T H FD    P+  R D+   G R   VT G +P A
Sbjct: 271 QLGGTDHGFDGTA-PLAPRKDIPD-GARHGTVTIGGDPAA 308


>AGl2363 [Q] COG0412 Dienelactone hydrolase and related enzymes Atu
           Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 288

 Score =  117 bits (294), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 99/199 (49%), Gaps = 22/199 (11%)

Query: 55  GPYPTVIALHGCGGLYSIVKDGRGEFTPRHLAMARVLTDAGYNVLFPDSFTPRGRRSTCQ 114
           GP+P ++ LHGCGGL   +KD           ++  L   GY VL  DSF  R  +STC 
Sbjct: 72  GPFPAIVILHGCGGLGPRLKDD----------VSGRLVSQGYVVLVVDSFATRQMKSTCA 121

Query: 115 DTVAQREISAMNRRFDVQAAMRWVTTQPDVDVKRIALLGWSHGASTVLASLNLAETDVAV 174
            T      +  +R +D   A+ +++ +P VD  R+AL+G+S G  T L     A     V
Sbjct: 122 TTERDVVFTISDRVYDAYGALDFLSKEPFVDASRVALMGFSAGGVTALT----ATKSGGV 177

Query: 175 RKIQP---RAAVAFYPDCRPYAKPSEPFKPAAPLLILMGENDDWTPPQACEAIEQKMQGS 231
            ++Q    +AA+A+YP C      +   +   P LI+ GE DDW PP  C      +   
Sbjct: 178 EQLQDKKFKAAIAYYPTCS-----ATDGEATVPTLIMAGELDDWGPPAKCRQRLANLSEK 232

Query: 232 DTELALRLYPDTYHDFDAP 250
            +E+ L +YP  +HDFD P
Sbjct: 233 GSEIRLIVYPGAFHDFDVP 251


>CC0087 Non COG
          Length = 252

 Score = 65.5 bits (158), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 54/118 (45%), Gaps = 13/118 (11%)

Query: 55  GPYPTVIALHGCGGLYSIVKDGRGEFTPRHLAMARVLTDAGYNVLFPDSFTPRGRRSTCQ 114
           GP+P  + LHGCGG            TP   A ARV   AG+  +  DS  PRG  +   
Sbjct: 25  GPFPVALILHGCGGK-----------TPFLEAYARVAVQAGWAAVVVDSLKPRGMSTLDA 73

Query: 115 DTVAQREIS--AMNRRFDVQAAMRWVTTQPDVDVKRIALLGWSHGASTVLASLNLAET 170
                  ++   + R  D+ A + W+ TQ   D  R+ L GWSHG  T++ S  +  +
Sbjct: 74  KLFVCTGVALHGLKRAADIFAMLTWLETQGWADANRVFLAGWSHGGWTIMDSYAVGRS 131