BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0003.0161.p (362 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2097 [O] COG1975 Xanthine and CO dehydrogenases maturation fa... 277 3e-74 PA1522 [O] COG1975 Xanthine and CO dehydrogenases maturation fac... 158 2e-38 CC2617 Non COG 157 4e-38 BMEI1574 [O] COG1975 Xanthine and CO dehydrogenases maturation f... 129 2e-29 SMb21288 [O] COG1975 Xanthine and CO dehydrogenases maturation f... 105 2e-22 >RSc2097 [O] COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family Rso Ralstonia solanacearum Length = 342 Score = 277 bits (708), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 160/326 (49%), Positives = 195/326 (59%), Gaps = 27/326 (8%) Query: 17 PAVLVTVAQIQGSTPRAPGARMLYTADTQFDTIGGGHLEWRAAQMARAMLQAPLGQLAGQ 76 P VLVTV +QGS PR PG ML AD F TIGGGHLEWRA +A+AM+ AP + Sbjct: 23 PCVLVTVVDVQGSAPREPGTLMLVCADAFFGTIGGGHLEWRAMAIAQAMMDAPQASGDAR 82 Query: 77 RRLERVALGPSLGQCCGGVVFLCFERIATDDEAMRTWQAL-EQSWSSGQDLWRAVPLDHA 135 R+ R+ LGP+LGQCCGGVV L ER+ D A W A+ +Q+ + + R VP D A Sbjct: 83 RQYVRIPLGPALGQCCGGVVRLSLERLDARDAA---WLAVADQAMRQRRSVRRFVPADAA 139 Query: 136 GAQLLIEGNIEDLPPDAYAHGLPPDTLGQRRQTRLLRDAQGRRWLLDWCHASRPQVVLFG 195 LP DA T+G ++ DA G L S +VL G Sbjct: 140 ------------LPVDA--------TIGDAAAAGVVIDANGFTQTLLPPDMS---IVLCG 176 Query: 196 AGHVGQAIVAVLSTLPCRVLWVDAREEMFPPGLPPQIRTEATDVPNAAVDMADPGAYFLV 255 AGHVG AIV L+ LPCRV WVD R+ MFP PP + EATD P A +D A G+YFLV Sbjct: 177 AGHVGHAIVRALAHLPCRVTWVDERDAMFPAEAPPNVAIEATDTPEAVIDAAPAGSYFLV 236 Query: 256 MTHSHALDQQLSERILKRQDLAWFGLIGSLTKRRQFEHRLAERGFSAAQLERITCPIGID 315 MTH+HALD L ERI++R D A+FGLIGS TKR +FEHR+ G A+L + CPIG+ Sbjct: 237 MTHNHALDLALCERIMRRTDFAYFGLIGSRTKRARFEHRMVAHGVDPARLPEMVCPIGVA 296 Query: 316 GIDGKEPASIAIAVVAQLLQLWEKRQ 341 GI K P IA++VVAQLLQ+ E Q Sbjct: 297 GIADKAPDIIAVSVVAQLLQVRELHQ 322 >PA1522 [O] COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family Pae Pseudomonas aeruginosa Length = 279 Score = 158 bits (399), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 71/149 (47%), Positives = 103/149 (69%) Query: 190 QVVLFGAGHVGQAIVAVLSTLPCRVLWVDAREEMFPPGLPPQIRTEATDVPNAAVDMADP 249 + +FGAGHVG+A+V +L++LPCRV W+D+RE FP LP + D V+ P Sbjct: 104 HIAVFGAGHVGRALVPLLASLPCRVRWIDSREHEFPALLPDGVEKVVNDEVLDEVERMPP 163 Query: 250 GAYFLVMTHSHALDQQLSERILKRQDLAWFGLIGSLTKRRQFEHRLAERGFSAAQLERIT 309 G++F+VMTH+H LD +L+ IL R D A+FGLIGS TKR +FEHRL ERG A +L+R+ Sbjct: 164 GSHFIVMTHNHPLDLELTAAILARNDFAYFGLIGSKTKRVKFEHRLRERGVDAERLQRMR 223 Query: 310 CPIGIDGIDGKEPASIAIAVVAQLLQLWE 338 CP+G++ + GK PA IAI++ +++ + Sbjct: 224 CPMGLEQVKGKLPAEIAISIAGEVIATYN 252 Score = 103 bits (257), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 51/99 (51%), Positives = 66/99 (66%), Gaps = 4/99 (4%) Query: 3 TWLAALRRMQRDATPAVLVTVAQIQGSTPRAPGARMLYTADTQFDTIGGGHLEWRAAQMA 62 W++AL +QR P VLVT+ + +GSTPR G++M+ +A+ +DTIGGGHLE+RA +A Sbjct: 2 NWISALAELQRSGEPCVLVTIIEERGSTPRNAGSKMVVSAERLYDTIGGGHLEYRAQAIA 61 Query: 63 RAMLQAPLGQLAGQRRLERVALGPSLGQCCGGVVFLCFE 101 R ML A RLER +LG SLGQCCGG L FE Sbjct: 62 REMLAA----RTQDTRLERFSLGASLGQCCGGATVLLFE 96 >CC2617 Non COG Length = 338 Score = 157 bits (396), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 128/359 (35%), Positives = 168/359 (46%), Gaps = 31/359 (8%) Query: 2 TTWLAALRRMQRDATPAVLVTVAQIQGSTPRAPGARMLYTADTQFDTIGGGHLEWRAAQM 61 + W A A LVTV +GS PR G +M+ Q TIGGG+LE+R A Sbjct: 3 SNWARAALARLDARDEAALVTVLATEGSAPREAGTKMVVWRAGQAGTIGGGNLEYRVADQ 62 Query: 62 ARAMLQAPLGQLAGQRRLERVALGPSLGQCCGGVVFLCFERIATDDEAMRTWQALEQSWS 121 AR ML A ++ LGP L QCCGG V L ER+ + T A + Sbjct: 63 ARRMLDGGQAHFA----IQDYPLGPLLAQCCGGRVRLFLERLNDNSRDWLTDAAKRMDAA 118 Query: 122 SGQDL-WRAVP--LDHAGAQLLIEGNIEDLPPDAYAHGLPPDTLGQRRQTRLLRDAQGRR 178 ++ R P L A +L + E P G P G R + L D Sbjct: 119 QPFEVRTRFEPGLLTKTIAPIL---STEADGPLVSLAGAPATARGARPE---LGDV---- 168 Query: 179 WLLDWCHASRPQVVLFGAGHVGQAIVAVLSTLPCRVLWVDAREEMFPPG-----LPPQIR 233 L++ A RP ++LFGAGHVGQAI LP R+ W D+R E G P ++ Sbjct: 169 -LVERADAPRPPLLLFGAGHVGQAIARAFEPLPFRLSWYDSRPETAEIGGVTVLEPAELA 227 Query: 234 TEATDVPNAAVDMADPGAYFLVMTHSHALDQQLSERILKRQDLAWFGLIGSLTKRRQFEH 293 +A A D AY LV+TH HALD L L ++FG+IGS TKR +F Sbjct: 228 AKAM---GAGAD-----AYGLVLTHDHALDYALVSAGLAGGGFSYFGVIGSKTKRARFMK 279 Query: 294 RLAERGFSAAQLERITCPIGIDGIDGKEPASIAIAVVAQLLQLWEKRQATPEQQPSPAV 352 RL + GFS A L R+TCPIG+ + K P IA++V A LL E + ++ S +V Sbjct: 280 RLRDDGFSEAVLTRLTCPIGLPHLKSKAPEVIAVSVAADLLMRQEAARIRNDEMSSASV 338 >BMEI1574 [O] COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family Bme Brucella melitensis Length = 290 Score = 129 bits (323), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 102/332 (30%), Positives = 138/332 (41%), Gaps = 90/332 (27%) Query: 9 RRMQRDATPAVLVTVAQIQGSTPRAPGARMLYTADTQFDTIGGGHLEWRAAQMARAMLQA 68 +R R+ VLV V ++GS PR GA ML DT F TIGGG LE+ A + AR +L Sbjct: 14 QRPARNGLDCVLVEVTDVKGSAPRDAGAWMLVARDTIFRTIGGGQLEYMAIEHARKILSG 73 Query: 69 PLGQLAGQRRLERVALGPSLGQCCGGVVFLCFERIATDDEAMRTWQALEQSWSSGQDLWR 128 G+ V LGP +GQC C R++ M Sbjct: 74 ------GRDTPLDVPLGPEIGQC-------CGGRVSLSFRLM------------------ 102 Query: 129 AVPLDHAGAQLLIEGNIEDLPPDAYAHGLPPDTLGQRRQTRLLRDAQGRRWLLDWCHASR 188 HGL + +G+ +D A R Sbjct: 103 -------------------------THGLADELVGK----------------VDTEIAMR 121 Query: 189 PQVVLFGAGHVGQAIVAVLSTLPCRVLWVDAREE-----------MFPPGLP-------P 230 P V +FGAGHVG A+ LS P RV+ VD RE +F PG P Sbjct: 122 PHVYIFGAGHVGGALARALSLTPVRVIMVDTREAELMKFQEKWEPVFRPGFHGNYICDVP 181 Query: 231 QIRTEATDVPNAAVDMADPGAYFLVMTHSHALDQQLSERILKRQDLAWFGLIGSLTKRRQ 290 + T + +P AV A P + F+++TH HALD ++ L+RQD A+ G+IGS TK+ Sbjct: 182 GVETCLSAIPEQAVRSAPPHSAFIILTHDHALDFLIAAEALQRQDAAYVGMIGSKTKKAT 241 Query: 291 FEHRLAERGFSAAQLERITCPIGIDGIDGKEP 322 F++ L E + CPIG + K P Sbjct: 242 FKNWLKREAGREDLFENLVCPIGGAVVKDKRP 273 >SMb21288 [O] COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family Sme Sinorhizobium meliloti Length = 288 Score = 105 bits (262), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 68/181 (37%), Positives = 93/181 (51%), Gaps = 4/181 (2%) Query: 173 DAQGRRWLLDWCH---ASRPQVVLFGAGHVGQAIVAVLSTLPCRVLWVDAREEMFPPGLP 229 DA R L++ A RP V +FGAGHVG A+ LS +P R + VD RE Sbjct: 101 DADTRAALIERSDDEIAHRPHVYIFGAGHVGNALAMALSHVPLRTVLVDTREHELSAADV 160 Query: 230 PQIRTEATDVPNAAVDMADPGAYFLVMTHSHALDQQLSERILKRQDLAWFGLIGSLTKRR 289 P I T T +P A V A P + F+V+TH HALD ++ L R+D ++ G+IGS TKR Sbjct: 161 PGIETCLTAMPEATVRDAPPDSAFVVLTHDHALDFLIATEALGREDASYVGMIGSKTKRA 220 Query: 290 QFEHRLAERGFSAAQLERITCPIGIDGIDGKEPASIAIAVVAQLLQLWEKRQATPEQQPS 349 F++ L+ R+ CPIG + K P IA A++L R P + P+ Sbjct: 221 TFKNWLSREVDRPELFGRLVCPIGGTAVKDKRPPVIAALAAAEILTAALNRHLQP-RAPT 279 Query: 350 P 350 P Sbjct: 280 P 280 Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 45/102 (44%), Positives = 55/102 (53%), Gaps = 5/102 (4%) Query: 8 LRRMQRDATPAVLVTVAQIQGSTPRAPGARMLYTADTQFDTIGGGHLEWRAAQMARAMLQ 67 +R T VLV VA GSTPR A ML + D F TIGGG LE+ A AR ++Q Sbjct: 10 IRDFLSRGTACVLVEVASAAGSTPRDADAWMLVSKDRTFSTIGGGQLEFMAIDHARKLVQ 69 Query: 68 APLGQLAGQRRLERVALGPSLGQCCGGVVFLCFERIATDDEA 109 L RL + LGP +GQCCGG V L F+++ D A Sbjct: 70 GANADL----RLA-IPLGPEIGQCCGGHVALSFKKVDADTRA 106