BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0003.0152.p         (180 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc1149 [O] COG1047 FKBP-type peptidyl-prolyl cis-trans isomeras...   236   2e-62
NMB1522 [O] COG1047 FKBP-type peptidyl-prolyl cis-trans isomeras...   155   3e-38
NMA1722 [O] COG1047 FKBP-type peptidyl-prolyl cis-trans isomeras...   155   3e-38
VC2604 [O] COG1047 FKBP-type peptidyl-prolyl cis-trans isomerase...   111   1e-24
PM1567 [O] COG1047 FKBP-type peptidyl-prolyl cis-trans isomerase...   108   4e-24

>RSc1149 [O] COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2 Rso
           Ralstonia solanacearum
          Length = 174

 Score =  236 bits (601), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 115/168 (68%), Positives = 139/168 (82%), Gaps = 1/168 (0%)

Query: 1   MKIAKNTVVSVNYKLSDAQNNLIEQSSEPMVYLHGGYHNTLPKIEEALDGKEAGYSTTIQ 60
           MKIAKNTVVSV YKLSDAQ N+IE+S EPMVYLHGGY  T PKIEEALDG E G+ T +Q
Sbjct: 1   MKIAKNTVVSVAYKLSDAQGNVIEESDEPMVYLHGGYDGTFPKIEEALDGHEQGFETKLQ 60

Query: 61  VEPEDAFGEYDSELVKIEPVERLPQPLEVGMQFEGSPDD-DSEESVIFTVTEVADGKAVL 119
           +EP+DAFGEYD EL+KIEP +R P+PLEVGMQFEG P+D D E+++I+TVT+VA+ K VL
Sbjct: 61  LEPDDAFGEYDQELIKIEPRDRFPEPLEVGMQFEGVPEDGDDEDAIIYTVTDVAEDKVVL 120

Query: 120 DGNHPLAGIALRFELAVTEVRAASEEEVSHGHVHGPHGHHHHHHDEDE 167
           DGNHPLAG+ALRF+L VT+VR A+ EE+ HGHVHG +G      D++E
Sbjct: 121 DGNHPLAGMALRFDLRVTDVREATAEEIEHGHVHGENGLEVADEDDEE 168


>NMB1522 [O] COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2 Nme
           Neisseria meningitidis MC58
          Length = 160

 Score =  155 bits (393), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 76/148 (51%), Positives = 107/148 (72%), Gaps = 1/148 (0%)

Query: 1   MKIAKNTVVSVNYKLSDAQNNLIEQSSEPMVYLHGGYHNTLPKIEEALDGKEAGYSTTIQ 60
           M I KN+VVS++Y++ DA N L++++ EP+ YLHGGY    P +EEAL GK+AG +  + 
Sbjct: 1   MAIVKNSVVSLHYEMYDANNQLLDKTEEPIAYLHGGYDGIFPLVEEALHGKDAGDTVDVA 60

Query: 61  VEPEDAFGEYDSELVKIEPVERLPQPLEVGMQFEGSPDDDSEESVIFTVTEVADGKAVLD 120
           + P+DAFGE D ELV+IE     P  +EVGM FE   D ++ + V++ VT+VADGKAV+D
Sbjct: 61  LSPDDAFGEQDPELVRIEDAGVFPVEVEVGMMFEAD-DPETGDVVVYRVTDVADGKAVVD 119

Query: 121 GNHPLAGIALRFELAVTEVRAASEEEVS 148
           GNHPLAG+ +RF+  V  VR AS+EE++
Sbjct: 120 GNHPLAGMKIRFKATVESVRDASDEEIA 147


>NMA1722 [O] COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2 NmA
           Neisseria meningitidis Z2491
          Length = 160

 Score =  155 bits (393), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 76/148 (51%), Positives = 107/148 (72%), Gaps = 1/148 (0%)

Query: 1   MKIAKNTVVSVNYKLSDAQNNLIEQSSEPMVYLHGGYHNTLPKIEEALDGKEAGYSTTIQ 60
           M I KN+VVS++Y++ DA N L++++ EP+ YLHGGY    P +EEAL GK+AG +  + 
Sbjct: 1   MAIVKNSVVSLHYEMYDANNQLLDKTEEPIAYLHGGYDGIFPLVEEALHGKDAGDTVDVA 60

Query: 61  VEPEDAFGEYDSELVKIEPVERLPQPLEVGMQFEGSPDDDSEESVIFTVTEVADGKAVLD 120
           + P+DAFGE D ELV+IE     P  +EVGM FE   D ++ + V++ VT+VADGKAV+D
Sbjct: 61  LSPDDAFGEQDPELVRIEDAGVFPVEVEVGMMFEAD-DPETGDVVVYRVTDVADGKAVVD 119

Query: 121 GNHPLAGIALRFELAVTEVRAASEEEVS 148
           GNHPLAG+ +RF+  V  VR AS+EE++
Sbjct: 120 GNHPLAGMKIRFKATVESVRDASDEEIA 147


>VC2604 [O] COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2 Vch
           Vibrio cholerae
          Length = 201

 Score =  111 bits (277), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 65/157 (41%), Positives = 99/157 (63%), Gaps = 8/157 (5%)

Query: 1   MKIAKNTVVSVNYKLSDAQNNLIEQSS--EPMVYLHGGYHNTLPKIEEALDGKEAGYSTT 58
           MKI KNTV S+ Y+L+     +++QS+   P+ YLHG ++N +  +E  L+GK AG   T
Sbjct: 1   MKIEKNTVASLAYQLTIEDGVVVDQSTVDAPLDYLHG-HNNLITGLERELEGKVAGDKFT 59

Query: 59  IQVEPEDAFGEYDSELVKIEPVERLP--QPLEVGMQFEGSPDDDSEESVIFTVTEVADGK 116
           + + PEDA+GE++ +LV+  P +       LEVGM+F    D   +  +   +TEV   +
Sbjct: 60  VTIAPEDAYGEHNEDLVQRVPADVFQGVDELEVGMRFLADTD---QGPIPVEITEVDGDE 116

Query: 117 AVLDGNHPLAGIALRFELAVTEVRAASEEEVSHGHVH 153
            V+DGNH LAG +L F + V  VRAA+E+E++HGH+H
Sbjct: 117 VVVDGNHMLAGQSLTFTVEVVAVRAATEDEIAHGHIH 153


>PM1567 [O] COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2 Pmu
           Pasteurella multocida
          Length = 199

 Score =  108 bits (271), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 70/173 (40%), Positives = 103/173 (59%), Gaps = 11/173 (6%)

Query: 1   MKIAKNTVVSVNYKLSDAQNNLIEQS--SEPMVYLHGGYHNTLPKIEEALDGKEAGYSTT 58
           MKIAKN VVS+ Y++      L++++  ++P+ YL G ++N +  +E AL+GK  G    
Sbjct: 1   MKIAKNVVVSIAYQVRTEDGVLVDEAPVNQPLEYLQG-HNNLVIGLENALEGKAVGDKFE 59

Query: 59  IQVEPEDAFGEYDSELVKIEP--VERLPQPLEVGMQFEGSPDDDSEESVIFTVTEVADGK 116
           ++V+PE+A+GEY+  +V+  P  V +    L VGM+F    D      VI   TEVA+  
Sbjct: 60  VRVKPEEAYGEYNENMVQRVPKDVFQGVDELVVGMRFIADTDIGPLPVVI---TEVAEND 116

Query: 117 AVLDGNHPLAGIALRFELAVTEVRAASEEEVSHGHVH---GPHGHHHHHHDED 166
            V+DGNH LAG  L F + V   R A+ EE++HGH+H   G  G HHH  DE+
Sbjct: 117 VVVDGNHMLAGQELLFSVEVVATREATLEEIAHGHIHQEGGCCGGHHHDSDEE 169