BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0003.0115.p (214 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1558 [R] COG0655 Multimeric flavodoxin WrbA Rso Ralstonia sol... 288 8e-78 PA0949 [R] COG0655 Multimeric flavodoxin WrbA Pae Pseudomonas ae... 254 7e-68 XF1094 [R] COG0655 Multimeric flavodoxin WrbA Xfa Xylella fastid... 225 5e-59 VC2166 [R] COG0655 Multimeric flavodoxin WrbA Vch Vibrio cholerae 222 5e-58 SSO3155 [R] COG0655 Multimeric flavodoxin WrbA Sso Sulfolobus so... 135 6e-32 >RSc1558 [R] COG0655 Multimeric flavodoxin WrbA Rso Ralstonia solanacearum Length = 201 Score = 288 bits (736), Expect = 8e-78, Method: Compositional matrix adjust. Identities = 135/192 (70%), Positives = 159/192 (82%) Query: 19 ILVLYYSRHGATRKLAELIAQGVESVPGCDARLRTVPAVSTVAEAVEPDVPASGAPYVEA 78 ILVLYYSRHG+TR LAE IAQG+ESV G AR+RTVPA+STV EA +P+VP +G PY E Sbjct: 8 ILVLYYSRHGSTRALAEAIAQGIESVDGAQARVRTVPAISTVCEATQPEVPGNGPPYAEV 67 Query: 79 SDLEECDGLALGSPTRFGNMAAAMKYFWDGTAPQWLSGALTGKPACVFTSTGSLHGGQEA 138 DLE+C GLALGSPTRFGNMAA +KYF DGT PQWLSGAL GKPACVFTSTGS+HGGQE Sbjct: 68 RDLEDCIGLALGSPTRFGNMAAPLKYFLDGTTPQWLSGALAGKPACVFTSTGSMHGGQET 127 Query: 139 TLLSMMIPLLHHGMLLVGLPYSHPELMNTHSGGTPYGASHWAGVNGNQPLSDDSRTLAIA 198 TLLSMM+PLLHHGM+++GLPY H ELM+T +GGTPYG +H A PL+ RTLA+A Sbjct: 128 TLLSMMMPLLHHGMVMLGLPYQHSELMSTDAGGTPYGPTHVAHRGDTAPLTAIERTLAVA 187 Query: 199 LGKRLAENAIKL 210 +G+RLA+ A++L Sbjct: 188 MGRRLAQTALRL 199 >PA0949 [R] COG0655 Multimeric flavodoxin WrbA Pae Pseudomonas aeruginosa Length = 198 Score = 254 bits (650), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 128/196 (65%), Positives = 151/196 (77%), Gaps = 1/196 (0%) Query: 15 SNATILVLYYSRHGATRKLAELIAQGVESVPGCDARLRTVPAVSTVAEAVEPDVPASGAP 74 S+ ILVLYYSRHGAT ++A IA+GVE G +AR+RTVPAVST EAV PD+PA GA Sbjct: 2 SSPYILVLYYSRHGATAEMARQIARGVEQ-GGFEARVRTVPAVSTECEAVAPDIPAEGAL 60 Query: 75 YVEASDLEECDGLALGSPTRFGNMAAAMKYFWDGTAPQWLSGALTGKPACVFTSTGSLHG 134 Y DL+ C GLALGSPTRFGNMA+ +KYF DGT+ WL+G+L GKPA VFTST SLHG Sbjct: 61 YATLEDLKNCAGLALGSPTRFGNMASPLKYFLDGTSSLWLTGSLVGKPAAVFTSTASLHG 120 Query: 135 GQEATLLSMMIPLLHHGMLLVGLPYSHPELMNTHSGGTPYGASHWAGVNGNQPLSDDSRT 194 GQE T LSM++PLLHHGML++G+PYS P L+ T GGTPYGASH+AG +G + L + T Sbjct: 121 GQETTQLSMLLPLLHHGMLVLGIPYSEPALLETRGGGTPYGASHFAGADGKRSLDEHELT 180 Query: 195 LAIALGKRLAENAIKL 210 L ALGKRLAE A KL Sbjct: 181 LCRALGKRLAETAGKL 196 >XF1094 [R] COG0655 Multimeric flavodoxin WrbA Xfa Xylella fastidiosa 9a5c Length = 199 Score = 225 bits (574), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 113/192 (58%), Positives = 138/192 (71%) Query: 19 ILVLYYSRHGATRKLAELIAQGVESVPGCDARLRTVPAVSTVAEAVEPDVPASGAPYVEA 78 ILVLYYS G+ +LA IA+G+ VPG ARLRTVP V+ V +A+ P +P GAPYV Sbjct: 4 ILVLYYSHSGSVARLARQIARGIAEVPGMAARLRTVPPVTAVTQALAPVIPEDGAPYVIP 63 Query: 79 SDLEECDGLALGSPTRFGNMAAAMKYFWDGTAPQWLSGALTGKPACVFTSTGSLHGGQEA 138 +DL+EC GL LGSPT FGNMAA +KYF D W +G L GKPA VFTSTGS+HGGQEA Sbjct: 64 TDLDECAGLLLGSPTHFGNMAAPVKYFLDSLGIDWANGTLVGKPAGVFTSTGSMHGGQEA 123 Query: 139 TLLSMMIPLLHHGMLLVGLPYSHPELMNTHSGGTPYGASHWAGVNGNQPLSDDSRTLAIA 198 TLLSM +PLLHHG L+VG+P++ L +T SGGTPYGASH A N +D+ LA A Sbjct: 124 TLLSMHLPLLHHGCLIVGIPFTERALSHTRSGGTPYGASHVANATNNTQPTDEETLLARA 183 Query: 199 LGKRLAENAIKL 210 LG+R+A+ A +L Sbjct: 184 LGRRVADLAQRL 195 >VC2166 [R] COG0655 Multimeric flavodoxin WrbA Vch Vibrio cholerae Length = 186 Score = 222 bits (565), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 113/194 (58%), Positives = 138/194 (71%), Gaps = 11/194 (5%) Query: 18 TILVLYYSRHGATRKLAELIAQGVESVPGCDARLRTVPAVSTVAEAVEPDVPASGAPYVE 77 +I+VLYYSRHG+T+ LA IA+GVESV GC A LRTV + A ++ PY+ Sbjct: 3 SIVVLYYSRHGSTQALARQIARGVESVEGCQALLRTVAELDGTA--------SNSDPYLS 54 Query: 78 ASDLEECDGLALGSPTRFGNMAAAMKYFWDGTAPQWLSGALTGKPACVFTSTGSLHGGQE 137 +L++CDGLALGSP FGNMAA +K+FWD T P WLSGAL KPACVFTS+ +LHGGQE Sbjct: 55 LDELKQCDGLALGSPVWFGNMAAPLKHFWDQTTPLWLSGALIDKPACVFTSSSTLHGGQE 114 Query: 138 ATLLSMMIPLLHHGMLLVGLPYSHPELMNTHSGGTPYGASHWAGVNGNQPLSDDSRTLAI 197 T SMM+PLLHHGML++G+PYS P L T SGGTPYGASH V+ + LS + LA Sbjct: 115 TTQQSMMLPLLHHGMLILGIPYSEPALHTTQSGGTPYGASH---VHQQKTLSSEEAELAR 171 Query: 198 ALGKRLAENAIKLR 211 LGKRLA A +L+ Sbjct: 172 QLGKRLAHVAKQLK 185 >SSO3155 [R] COG0655 Multimeric flavodoxin WrbA Sso Sulfolobus solfataricus Length = 197 Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 77/195 (39%), Positives = 112/195 (57%), Gaps = 6/195 (3%) Query: 19 ILVLYYSRHGATRKLAELIAQGVESVPG--CDARLRTVPAVSTVAEAVEPDVPASGAPYV 76 ILVL+Y +G+ LA+ +A+G + + AR++ V + P P Sbjct: 6 ILVLFYG-YGSIVDLAKNVAEGAKEITKEVKLARVKEYFPQEIVNKFRIPIDTVKDIPEA 64 Query: 77 EASDLEECDGLALGSPTRFGNMAAAMKYFWDGTAPQWLSGALTGKPACVFTSTGSLHGGQ 136 SDLE DG+ +GSPTR+GNM +K F D TA W+ G+L GKP FT ++HGG Sbjct: 65 TLSDLEWADGIVMGSPTRYGNMTGQLKLFLDQTAELWIKGSLYGKPVGFFTEASTMHGGH 124 Query: 137 EATLLSMMIPLLHHGMLLVGLPYSHPELMNTHSGGTPYGASHWAGVNGNQPLSDDSRTLA 196 E+T+L+M HHGM++V + Y E+ +T +GG+PYGASH + + L ++ +A Sbjct: 125 ESTILAMANYAYHHGMIIVPVGYGIKEVSSTMTGGSPYGASH---LGNKKELDENEINIA 181 Query: 197 IALGKRLAENAIKLR 211 LGKR+AE A KLR Sbjct: 182 KFLGKRVAEVAKKLR 196