BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0003.0091.p (257 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value MK0603 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transp... 214 2e-55 PA0184 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transp... 209 6e-54 MA0063 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transp... 205 7e-53 PAE1066 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate trans... 200 3e-51 MJ0412 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transp... 197 2e-50 >MK0603 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Mka Methanopyrus kandleri AV19 Length = 246 Score = 214 bits (545), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 111/241 (46%), Positives = 159/241 (65%), Gaps = 4/241 (1%) Query: 3 LSFNNVAKHFGDLHVIEEFTREIASGELVALVGPSGCGKSTLLHMAAGLEKPSSGSVAGD 62 L ++ K + DL V++ T E++ GE A+VGPSGCGK+TLL + AGLE +G V D Sbjct: 5 LKVEDLHKSYDDLKVLDGITFEVSEGEFFAIVGPSGCGKTTLLKIIAGLEDYDAGRVLVD 64 Query: 63 GQTIRGPHPERTLMFQENALYPWLTLQQNVALALEFQSVDKKKAAEQARVWLENVK-LKG 121 G+ +R P P+R L+FQE A++PW T+ +NV A Q D ++A AR L+ V L+G Sbjct: 65 GEEVREPGPDRALVFQEYAIFPWKTVLENVMFAPLMQGKDPEEAERIARECLKVVPGLEG 124 Query: 122 FEHYYPHQVSGGMRQRAALARAFISQPKALLLDEPFGALDALTRMTLQDALRDLIRQQGP 181 FE YP Q+SGGM+QR A+ARA ++P+ LL+DEPF A+DA TR +Q+ L + + G Sbjct: 125 FEDAYPKQLSGGMKQRVAIARALAAEPRILLMDEPFAAVDAQTRNKMQEELLKIWERTGQ 184 Query: 182 TVVLVTHDVDEALFLADRIFVFSPRPAKVLK--EFNLVHHEKTHDLSEFAAIRRDILCLL 239 T++LVTH+V+EA+FLADR+ V SPRPA+++ E +L D EF +R IL ++ Sbjct: 185 TILLVTHNVEEAVFLADRVMVLSPRPAEIVDIVEIDLPRPRDRTD-PEFVELRARILDMI 243 Query: 240 G 240 G Sbjct: 244 G 244 >PA0184 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Pae Pseudomonas aeruginosa Length = 279 Score = 209 bits (531), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 108/222 (48%), Positives = 145/222 (65%), Gaps = 6/222 (2%) Query: 3 LSFNNVAKHFG----DLHVIEEFTREIASGELVALVGPSGCGKSTLLHMAAGLEKPSSGS 58 +SF V KHF L I++F EI GE +A+VG SGCGKSTLL + GL++ G Sbjct: 14 VSFRQVRKHFAVDGRRLEAIQQFDLEIGEGEFIAIVGASGCGKSTLLRLLIGLDRDYDGE 73 Query: 59 VAGDGQTIRGPHPERTLMFQENALYPWLTLQQNVALALEFQSVDKKKAAEQARVWLENVK 118 + DG+ I G ER ++FQE+ L+PWLT+QQNVAL L +++ + A + ++ V Sbjct: 74 IRVDGRPIAGIGGERGIVFQEHRLFPWLTVQQNVALGLVNEALGETDKAARIDEYIRLVG 133 Query: 119 LKGFEHYYPHQVSGGMRQRAALARAFISQPKALLLDEPFGALDALTRMTLQDALRDLIRQ 178 L GFE YPHQ+SGGM QR A+AR ++ P+ LLLDEPF ALDALTR LQ+ L + R+ Sbjct: 134 LHGFERAYPHQLSGGMAQRVAIARGLVASPRLLLLDEPFSALDALTRQQLQEELLAIRRR 193 Query: 179 QGPTVVLVTHDVDEALFLADRIFVFSPRPAKVLK--EFNLVH 218 T +LVTHDV+EAL+LADR+ V PRP ++ + E L H Sbjct: 194 TRITTLLVTHDVEEALYLADRVVVMEPRPGRIRRVVEVGLAH 235 >MA0063 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Mac Methanosarcina acetivorans str.C2A Length = 268 Score = 205 bits (522), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 109/257 (42%), Positives = 160/257 (62%), Gaps = 13/257 (5%) Query: 2 KLSFNNVAKHFGD------LHVIEEFTREIASGELVALVGPSGCGKSTLLHMAAGLEKPS 55 ++S NV++ F + + ++ GE + L+GPSGCGK+TLL +AAGLE + Sbjct: 17 RVSVKNVSRVFSKKEDESGTEALHNISFDVQDGEFICLLGPSGCGKTTLLRIAAGLETLT 76 Query: 56 SGSVAGDGQTIRGPHPERTLMFQENALYPWLTLQQNVALALEFQSVDKKKAAEQARVWLE 115 SG + +G I GP P+R ++FQ+ +L+PW T+ N+ LE Q + K +A +Q +LE Sbjct: 77 SGEITLNGVPITGPDPKRGMVFQQYSLFPWRTVIDNITFGLEMQGIKKSEARKQVEKYLE 136 Query: 116 NVKLKGFEHYYPHQVSGGMRQRAALARAFISQPKALLLDEPFGALDALTRMTLQDALRDL 175 V L F++ YPH++SGGM+QRAA+ARA ++P+ LL+DEPFGALDA TR LQD L + Sbjct: 137 LVGLGQFKNSYPHELSGGMQQRAAIARALANEPEVLLMDEPFGALDAQTRNVLQDELLKI 196 Query: 176 IRQQGPTVVLVTHDVDEALFLADRIFVFSPRPAKVLKEFNLVH--HEKTHDLSEFAAIRR 233 Q+ T + VTH VDEA+FL+DRI V + RP +V KE V ++ E +R Sbjct: 197 WEQKHVTFLFVTHSVDEAVFLSDRIVVMTSRPGRV-KEIVSVELPRPRSRTSPEVNRLRD 255 Query: 234 DILCLLGIHAEQDEFAK 250 +L LL E++ F+K Sbjct: 256 HVLKLL----EEERFSK 268 >PAE1066 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Pya Pyrobaculum aerophilum Length = 254 Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 102/217 (47%), Positives = 140/217 (64%), Gaps = 3/217 (1%) Query: 3 LSFNNVAKHFGDLHVIEEFTREIASGELVALVGPSGCGKSTLLHMAAGLEKPSSGSVAGD 62 + N + K +G + V + + +I +GE VAL+GPSGCGKSTLL + AGLE+P SG V Sbjct: 14 IEVNKIKKRYGKVEVFNDLSIDIETGEFVALLGPSGCGKSTLLRIIAGLERPDSGEVRFR 73 Query: 63 GQTIRGPHPERTLMFQENALYPWLTLQQNVALALEFQSVDKKKAAEQARVWLENVKLKGF 122 G+ +RGP E LMFQ + PW T Q NVAL L + + ++A E A +L V L GF Sbjct: 74 GEPVRGPRREIALMFQSPTILPWKTAQDNVALPLVARGMGWREAREAAARYLALVGLSGF 133 Query: 123 EHYYPHQVSGGMRQRAALARAFISQPKALLLDEPFGALDALTRMTLQDALRDLIRQQGP- 181 E YP Q+SGGM+QR ALARA +P+ LLLDEPF ALD LT +L+ L + + Sbjct: 134 EEAYPKQLSGGMQQRVALARALAVEPEVLLLDEPFSALDPLTAESLRAELVRIWHENLST 193 Query: 182 --TVVLVTHDVDEALFLADRIFVFSPRPAKVLKEFNL 216 TV++VTH VDEA+++A+R+ V S RPAK++ + + Sbjct: 194 VHTVIMVTHAVDEAVYMANRVVVLSTRPAKIVADIKI 230 >MJ0412 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Mja Methanococcus jannaschii Length = 267 Score = 197 bits (502), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 101/259 (38%), Positives = 160/259 (61%), Gaps = 12/259 (4%) Query: 1 MKLSFNNVAKHF----GDLHVIEEFTREIASGELVALVGPSGCGKSTLLHMAAGLEKPSS 56 +KL N+ K F + ++ E+ E + ++GPSGCGK+TLL + AGL+ P+ Sbjct: 15 VKLKVENLTKIFEFNGNRVKALDNINLEVYENEFLTVMGPSGCGKTTLLRIIAGLDYPTE 74 Query: 57 GSVAGDGQTIRGPHPERTLMFQENALYPWLTLQQNVALALEFQSVDKKKAAEQARVWLEN 116 G V DG+ ++GP +R ++FQ+ L PW T+ +NV LE + + K + E A+ +++ Sbjct: 75 GKVLLDGKEVKGPGADRGVVFQQYTLMPWRTVLKNVTFGLELKGIPKNERIEIAKKFIKM 134 Query: 117 VKLKGFEHYYPHQVSGGMRQRAALARAFISQPKALLLDEPFGALDALTRMTLQDALRDLI 176 V L+GFE YP+Q+SGGM+QR A+AR + P+ +L+DEPF ALDA TR LQ+ L + Sbjct: 135 VGLEGFEDAYPYQLSGGMQQRVAIARTLANDPEIVLMDEPFAALDAQTRNILQNELLKIW 194 Query: 177 RQQGPTVVLVTHDVDEALFLADRIFVFSPRPAKVLKEFNLVHHEKTHDLS--EFAAIRRD 234 +++ TV VTH VDEA++L+DR+ V + RP ++ KE + E+ D + EF R+ Sbjct: 195 QKEKKTVFFVTHSVDEAVYLSDRVVVLTARPGRI-KEIVKIDLERPRDRTSIEFLEYRKK 253 Query: 235 ILCLLGIHAEQDEFAKNIE 253 IL +L +DE K+++ Sbjct: 254 ILNIL-----KDEVLKSLK 267