BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0003.0059.p (222 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA0045 [M] COG1462 Uncharacterized protein involved in formation... 333 1e-91 YPO2972 [M] COG1462 Uncharacterized protein involved in formatio... 328 8e-90 RSp0673 [M] COG1462 Uncharacterized protein involved in formatio... 316 3e-86 NMB1164 [M] COG1462 Uncharacterized protein involved in formatio... 301 7e-82 NMB1126 [M] COG1462 Uncharacterized protein involved in formatio... 301 7e-82 >PA0045 [M] COG1462 Uncharacterized protein involved in formation of curli polymers Pae Pseudomonas aeruginosa Length = 228 Score = 333 bits (855), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 156/212 (73%), Positives = 185/212 (87%) Query: 11 AVVMVSALAGCASEGSRSVAVVKVASAGQAYQGARSPIAVGKFENRSSYLRGIFSDGVDR 70 AV ++ LAGCA+E S ++ V +V S + Y G RSPIAVGKF+NRSSY+RGIFSDGVDR Sbjct: 14 AVATLAGLAGCATETSTALPVQQVESVNRPYSGVRSPIAVGKFDNRSSYMRGIFSDGVDR 73 Query: 71 LGNQAKTVLITHLQQSNRFSVMDRDSMSELAQEAKLNQQTQSIKGANYVVTGDVSEFGRK 130 LG QAKT+LITHLQQ+NRF+V+DRD+MSE+ QEA + Q Q +KGA+YVVTGDV+EFGRK Sbjct: 74 LGGQAKTILITHLQQTNRFNVLDRDNMSEIQQEAAIKGQAQRLKGADYVVTGDVTEFGRK 133 Query: 131 ETGDRQLFGILGRGKSQVAYAKVSLNIVDVNTSQVVYSAQGAGEYSLDNREIIGFGGTAS 190 E GDRQLFGILGRGKSQ+AYAKV+LNIV+++TS+VVYS QGAGEY+L NRE+IGFGGTAS Sbjct: 134 EVGDRQLFGILGRGKSQIAYAKVALNIVNISTSEVVYSTQGAGEYALSNREVIGFGGTAS 193 Query: 191 YDSTLNGKVLDLAIREAVQNLVTGIDSGAWKP 222 YDSTLNGKVLDLA+REAV LV +DSGAWKP Sbjct: 194 YDSTLNGKVLDLAMREAVNKLVNAVDSGAWKP 225 >YPO2972 [M] COG1462 Uncharacterized protein involved in formation of curli polymers Ype Yersinia pestis Length = 223 Score = 328 bits (840), Expect = 8e-90, Method: Compositional matrix adjust. Identities = 153/205 (74%), Positives = 183/205 (89%) Query: 18 LAGCASEGSRSVAVVKVASAGQAYQGARSPIAVGKFENRSSYLRGIFSDGVDRLGNQAKT 77 L+GCA+E SRS+ V KVAS G Y G RSPI+VGKF+NRSSY+ G+FSDGVDRLGNQ+KT Sbjct: 17 LSGCATESSRSLEVAKVASYGTQYNGPRSPISVGKFDNRSSYMSGLFSDGVDRLGNQSKT 76 Query: 78 VLITHLQQSNRFSVMDRDSMSELAQEAKLNQQTQSIKGANYVVTGDVSEFGRKETGDRQL 137 +L+THLQQ+ RF+V++R +M EL EA ++ ++Q +KGA YVVTGDV+EFGRKETGDRQL Sbjct: 77 ILVTHLQQTGRFNVLERTNMEELKNEAAISGKSQRLKGATYVVTGDVTEFGRKETGDRQL 136 Query: 138 FGILGRGKSQVAYAKVSLNIVDVNTSQVVYSAQGAGEYSLDNREIIGFGGTASYDSTLNG 197 +GILGRGKSQVAYAKV+LNIV+VNTS+VV+S+QGAGEY L NRE+IGFGGTASYDSTLNG Sbjct: 137 WGILGRGKSQVAYAKVNLNIVNVNTSEVVFSSQGAGEYELSNREVIGFGGTASYDSTLNG 196 Query: 198 KVLDLAIREAVQNLVTGIDSGAWKP 222 KVLDLAIREAV NLV GI+SGAW+P Sbjct: 197 KVLDLAIREAVNNLVAGIESGAWQP 221 >RSp0673 [M] COG1462 Uncharacterized protein involved in formation of curli polymers Rso Ralstonia solanacearum Length = 227 Score = 316 bits (809), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 145/205 (70%), Positives = 177/205 (86%) Query: 18 LAGCASEGSRSVAVVKVASAGQAYQGARSPIAVGKFENRSSYLRGIFSDGVDRLGNQAKT 77 L GCA+E S+++ V KV SA + Y G R+PIAVGKF+NRS+Y+RG+FSDGVDRLG QAKT Sbjct: 20 LGGCATETSQALPVQKVESASRPYAGVRTPIAVGKFDNRSAYMRGVFSDGVDRLGGQAKT 79 Query: 78 VLITHLQQSNRFSVMDRDSMSELAQEAKLNQQTQSIKGANYVVTGDVSEFGRKETGDRQL 137 +LITHLQQ+NRF+V+DRD+M E+ +EA L Q +KGA+YV+TGDV+EFGRKE GD+QL Sbjct: 80 ILITHLQQTNRFNVLDRDNMVEIKREATLKNTAQKLKGADYVITGDVTEFGRKEVGDQQL 139 Query: 138 FGILGRGKSQVAYAKVSLNIVDVNTSQVVYSAQGAGEYSLDNREIIGFGGTASYDSTLNG 197 FGILGRG+ Q+AYAKVSLN+V++ TS+VVYSA GAGEY L NRE++GFGGTASYDSTLNG Sbjct: 140 FGILGRGREQIAYAKVSLNVVNIATSEVVYSAGGAGEYKLSNREVVGFGGTASYDSTLNG 199 Query: 198 KVLDLAIREAVQNLVTGIDSGAWKP 222 KVLDLA+REAV LV I+SGAWKP Sbjct: 200 KVLDLAMREAVTTLVNAIESGAWKP 224 >NMB1164 [M] COG1462 Uncharacterized protein involved in formation of curli polymers Nme Neisseria meningitidis MC58 Length = 223 Score = 301 bits (771), Expect = 7e-82, Method: Compositional matrix adjust. Identities = 138/203 (67%), Positives = 177/203 (87%) Query: 20 GCASEGSRSVAVVKVASAGQAYQGARSPIAVGKFENRSSYLRGIFSDGVDRLGNQAKTVL 79 GCA+E SRS+ V KVAS Y G R+PI+VG F+NRSS+ +GIFSDG DRLG+QAKT+L Sbjct: 19 GCATESSRSLEVEKVASYNTQYHGVRTPISVGTFDNRSSFQKGIFSDGEDRLGSQAKTIL 78 Query: 80 ITHLQQSNRFSVMDRDSMSELAQEAKLNQQTQSIKGANYVVTGDVSEFGRKETGDRQLFG 139 +THLQQ+NRF+V++R +++ L QE+ ++ + ++KGA+YVVTGDV+EFGR++ GD QLFG Sbjct: 79 VTHLQQTNRFNVLNRTNLNALKQESGISGKAHNLKGADYVVTGDVTEFGRRDVGDHQLFG 138 Query: 140 ILGRGKSQVAYAKVSLNIVDVNTSQVVYSAQGAGEYSLDNREIIGFGGTASYDSTLNGKV 199 ILGRGKSQ+AYAKV+LNIV+VNTS++VYSAQGAGEY+L NREIIGFGGT+ YD+TLNGKV Sbjct: 139 ILGRGKSQIAYAKVALNIVNVNTSEIVYSAQGAGEYALSNREIIGFGGTSGYDATLNGKV 198 Query: 200 LDLAIREAVQNLVTGIDSGAWKP 222 LDLAIREAV +LV +D+GAW+P Sbjct: 199 LDLAIREAVNSLVQAVDNGAWQP 221 >NMB1126 [M] COG1462 Uncharacterized protein involved in formation of curli polymers Nme Neisseria meningitidis MC58 Length = 223 Score = 301 bits (771), Expect = 7e-82, Method: Compositional matrix adjust. Identities = 138/203 (67%), Positives = 177/203 (87%) Query: 20 GCASEGSRSVAVVKVASAGQAYQGARSPIAVGKFENRSSYLRGIFSDGVDRLGNQAKTVL 79 GCA+E SRS+ V KVAS Y G R+PI+VG F+NRSS+ +GIFSDG DRLG+QAKT+L Sbjct: 19 GCATESSRSLEVEKVASYNTQYHGVRTPISVGTFDNRSSFQKGIFSDGEDRLGSQAKTIL 78 Query: 80 ITHLQQSNRFSVMDRDSMSELAQEAKLNQQTQSIKGANYVVTGDVSEFGRKETGDRQLFG 139 +THLQQ+NRF+V++R +++ L QE+ ++ + ++KGA+YVVTGDV+EFGR++ GD QLFG Sbjct: 79 VTHLQQTNRFNVLNRTNLNALKQESGISGKAHNLKGADYVVTGDVTEFGRRDVGDHQLFG 138 Query: 140 ILGRGKSQVAYAKVSLNIVDVNTSQVVYSAQGAGEYSLDNREIIGFGGTASYDSTLNGKV 199 ILGRGKSQ+AYAKV+LNIV+VNTS++VYSAQGAGEY+L NREIIGFGGT+ YD+TLNGKV Sbjct: 139 ILGRGKSQIAYAKVALNIVNVNTSEIVYSAQGAGEYALSNREIIGFGGTSGYDATLNGKV 198 Query: 200 LDLAIREAVQNLVTGIDSGAWKP 222 LDLAIREAV +LV +D+GAW+P Sbjct: 199 LDLAIREAVNSLVQAVDNGAWQP 221