BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0003.0048.p (290 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2773 [F] COG0284 Orotidine-5'-phosphate decarboxylase Rso Ral... 360 2e-99 VNG1673G [F] COG0284 Orotidine-5'-phosphate decarboxylase Hbs Ha... 195 9e-50 CAC2652 [F] COG0284 Orotidine-5'-phosphate decarboxylase Cac Clo... 151 2e-36 alr2945_1 [F] COG0284 Orotidine-5'-phosphate decarboxylase Nos N... 142 1e-33 Rv1385 [F] COG0284 Orotidine-5'-phosphate decarboxylase Mtu Myco... 114 2e-25 >RSc2773 [F] COG0284 Orotidine-5'-phosphate decarboxylase Rso Ralstonia solanacearum Length = 288 Score = 360 bits (923), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 173/254 (68%), Positives = 205/254 (80%), Gaps = 2/254 (0%) Query: 3 FIEKLNAAWTSRNSLLCVGLDPDLKKFPAELQGKPDAIFEFCRAIIDATAEAACAFKPQI 62 F E+L AAW NSLLCVGLDPD + PA L AIF FCRAI+DATA+ CAFKPQI Sbjct: 20 FTEQLAAAWQRNNSLLCVGLDPDPARLPASLTTSGGAIFSFCRAIVDATADLVCAFKPQI 79 Query: 63 AYFAALGAEEQLERICAYLRSNYPDIPLVLDAKRGDIGATAEQYAREAFERYDADVVTVS 122 AYFA+ AE+QLE++ AY+ YP IP++LDAKRGDIG+TAE YA+EAFERY AD VTVS Sbjct: 80 AYFASQRAEDQLEQLIAYIHEAYPGIPVILDAKRGDIGSTAEHYAKEAFERYQADAVTVS 139 Query: 123 PYMGWDSVSPYLEWKDRGVIVLCRTSNAGGSDLQFLEVDGKPLYQHVARLVAEKWNTNGQ 182 PYMG+DS+ PYL D+GVIVLCRTSNAGGSD+QFLE +G+P+YQ VA + WNT+GQ Sbjct: 140 PYMGFDSMQPYLVHPDKGVIVLCRTSNAGGSDVQFLETNGRPVYQVVAERARDAWNTSGQ 199 Query: 183 CGLVVGATFPQELAQVRAIIGDMPLLVPGVGAQGGDVQATVTAGKTAAGTGMMINSSRAI 242 GLVVGATFPQE+ +VR I+GDMPLL+PG+G QGGD++ATV AG+TA GTGMMINSSRAI Sbjct: 200 MGLVVGATFPQEIRRVREIVGDMPLLIPGIGVQGGDIEATVRAGRTADGTGMMINSSRAI 259 Query: 243 LYATPQAGEDFAAA 256 LYA+ + DFA A Sbjct: 260 LYASSDS--DFADA 271 >VNG1673G [F] COG0284 Orotidine-5'-phosphate decarboxylase Hbs Halobacterium sp. NRC-1 Length = 267 Score = 195 bits (496), Expect = 9e-50, Method: Compositional matrix adjust. Identities = 111/248 (44%), Positives = 153/248 (61%), Gaps = 10/248 (4%) Query: 1 VTFIEKLNAAWTSRNSLLCVGLDPDLKKFPAELQGKPDAIFEFCRAIIDATAEAACAFKP 60 ++F+E+L A + +S++ VGLDPD+++ P ++Q + F R IIDAT E A FKP Sbjct: 1 MSFVEELGARIEAADSVVSVGLDPDMERLPEDVQDAELPRWAFNRRIIDATHEHAAVFKP 60 Query: 61 QIAYFAALGAEEQLERICAYLRSNYPDIPLVLDAKRGDIGATAEQYAREAFERYDADVVT 120 A++ L AY ++ +P++LDAKR DIG TA QYA E DA +T Sbjct: 61 NAAFYEDSDGWRALRETVAY--AHGKGVPVLLDAKRADIGNTARQYA-EILAHVDA--IT 115 Query: 121 VSPYMGWDSVSPYLEWKDRGVIVLCRTSNAGGSDLQFLEVDG--KPLYQHVARLVAEKWN 178 V+PY+G D++ P+L + GV VLCRTSN GG D Q LE+ + LY+HVA AE WN Sbjct: 116 VNPYLGEDALQPFLTQDEAGVFVLCRTSNEGGMDFQHLELAAYDRRLYEHVAERAAE-WN 174 Query: 179 TN-GQCGLVVGATFPQELAQVRAIIGDMPLLVPGVGAQGGDVQATVTAGKTAAGTGMMIN 237 G GLVVGAT P EL +R + ++P LVPGVGAQGGD +A V G G G ++N Sbjct: 175 AQYGDVGLVVGATAPDELQAIRERVPELPFLVPGVGAQGGDAEAAVEYGLNDDGVG-LVN 233 Query: 238 SSRAILYA 245 S+R +++A Sbjct: 234 STRGVIFA 241 >CAC2652 [F] COG0284 Orotidine-5'-phosphate decarboxylase Cac Clostridium acetobutylicum Length = 286 Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 97/259 (37%), Positives = 135/259 (52%), Gaps = 23/259 (8%) Query: 12 TSRNSLLCVGLDPDLKKFPAELQGK----PDAIFEFCRAIIDATAEAACAFKPQIAYFAA 67 + +C+GLD D+ P E K DAIF F + IIDAT + +K QIAY+ A Sbjct: 10 VEKKGHVCLGLDTDITYVPEEFCKKFNSIEDAIFNFNKKIIDATLDVVSCYKVQIAYYEA 69 Query: 68 LGAEEQL--ERICAYLRSNYPDIPLVLDAKRGDIGATAEQYAREAFE-RYDADVVTVSPY 124 G + L +R YLR + D KRGDI TAE YA+ FE ++AD VT++PY Sbjct: 70 YGLKGLLAYKRTLEYLRE--KKAIAIADIKRGDIAKTAEMYAKAHFEGDFEADFVTLNPY 127 Query: 125 MGWDSVSPYL---EWKDRGVIVLCRTSNAGGSDLQFLEVD-GKPLYQHVARLV------A 174 MG D + PY+ E ++G+ +L RTSN G D+Q+++ GK +Y V + A Sbjct: 128 MGLDGIEPYMPYIEKMEKGLFILLRTSNKGAYDIQYIKTQGGKNVYDEVGEKIYDLGQKA 187 Query: 175 EKWNTNGQCGLVVGATFPQELAQVRAIIGDMPLLVPGVGAQGGDVQATVTAGKTAAGTGM 234 + G VVG T +E ++R +M L+PG GAQGG A + G G Sbjct: 188 TGRSKYSSIGAVVGCTHVEEGVEIRNKFKNMFFLIPGYGAQGG--TAKEVSLYLREGNGG 245 Query: 235 MINSSRAIL--YATPQAGE 251 ++NSSR IL Y + GE Sbjct: 246 VVNSSRGILLAYKKEENGE 264 >alr2945_1 [F] COG0284 Orotidine-5'-phosphate decarboxylase Nos Nostoc sp. PCC 7120 Length = 257 Score = 142 bits (358), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 80/239 (33%), Positives = 133/239 (55%), Gaps = 9/239 (3%) Query: 1 VTFIEKLNAAWTSRNSLLCVGLDPDLKKFPAELQGKP--DAIFEFCRAIIDATAEAACAF 58 + F +KL+ + SLL VGLDP+ + P + D ++++ + II TA+ CA+ Sbjct: 24 MIFFDKLHQNISQNQSLLFVGLDPNPEMMPGRYSSQDIIDGLWDWLQFIIAETADFVCAY 83 Query: 59 KPQIAYFAALGAE--EQLERICAYLRSNYPDIPLVLDAKRGDIGATAEQYAREAFERYDA 116 KP + ++ ALG E L++ A + S+ IP++LDAK D+ T+ +A+ F ++ Sbjct: 84 KPTLGFYEALGVPGLELLQKTLAAIPSH---IPIILDAKHSDLN-TSTIFAKTVFTQWGV 139 Query: 117 DVVTVSPYMGWDSVSPYLEWKDRGVIVLCRTSNAGGSDLQFLEVDGKPLYQHVARLVAEK 176 D +T+SPY G D V+P+L + D+ V +LC TSN G LQ PLY V + ++ Sbjct: 140 DAITLSPYTGQDHVAPFLVYPDKAVFILCSTSNPGAEALQQYPTRESPLYLQVVQ-ESKN 198 Query: 177 WNTNGQCGLVVGATFPQELAQVRAIIGDMPLLVPGVGAQGGDVQATVTAGKTAAGTGMM 235 W T Q GL VG T + LA++R + + ++V + A+GG++ + G G G++ Sbjct: 199 WGTPEQLGLEVGTTNAEVLARIRQVAPERMIMVRSIWAEGGNLNRILEVGLNTDGNGLL 257 >Rv1385 [F] COG0284 Orotidine-5'-phosphate decarboxylase Mtu Mycobacterium tuberculosis H37Rv Length = 274 Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 95/247 (38%), Positives = 126/247 (51%), Gaps = 19/247 (7%) Query: 13 SRNSLLCVGLDPDLKKFPA-ELQGKPDAIFEFCRAIIDATAEAACAFKPQIAYFAALGAE 71 +R LC+G+DP + +L D + FC + A A+ A KPQ+A+F + GA Sbjct: 13 ARRGPLCLGIDPHPELLRGWDLATTADGLAAFCDICVRAFADFAV-VKPQVAFFESYGAA 71 Query: 72 --EQLERICAYLRSNYPDIPLVLDAKRGDIGATAEQYARE--AFERYDADVVTVSPYMGW 127 LER A LR+ D+ ++ DAKRGDIGAT YA AD VT SPY+G+ Sbjct: 72 GFAVLERTIAELRAA--DVLVLADAKRGDIGATMSAYATAWVGDSPLAADAVTASPYLGF 129 Query: 128 DSVSPYLE---WKDRGVIVLCRTSNAGGSDLQFLEVDGKPLYQHVARLVAEKWNTN---- 180 S+ P LE RGV VL TSN G+ +Q DG+ + Q V V Sbjct: 130 GSLRPLLEVAAAHGRGVFVLAATSNPEGAAVQNAAADGRSVAQLVVDQVGAANEAAGPGP 189 Query: 181 GQCGLVVGATFPQELAQVRAIIGDMPLLVPGVGAQGGDVQATVTAGKTAAGTGMMINSSR 240 G G+VVGAT PQ + A G P+LVPGVG QGG +A G AA + ++ +R Sbjct: 190 GSIGVVVGATAPQA-PDLSAFTG--PVLVPGVGVQGGRPEALGGLGG-AASSQLLPAVAR 245 Query: 241 AILYATP 247 +L A P Sbjct: 246 EVLRAGP 252