BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0003.0015.p         (99 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mlr7950 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate trans...   162   1e-40
mll6978 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate trans...   112   3e-25
RSc1199 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate trans...   111   3e-25
AGl1200 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate trans...   108   3e-24
SMc02346 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate tran...   105   3e-23

>mlr7950 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport
           system, ATPase component Mlo Mesorhizobium loti
          Length = 300

 Score =  162 bits (411), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 78/99 (78%), Positives = 86/99 (86%)

Query: 1   MDEPFSALDMQTRTLMQDELLRLWSAHSGSVVFVTHDLEEAIALADKVYVLTARPATLKS 60
           MDEPFSALD+QTR LM +ELLRLWS    SVVFVTHDLEEAIALADKVYVLTA PAT+KS
Sbjct: 196 MDEPFSALDVQTRVLMHEELLRLWSEAKASVVFVTHDLEEAIALADKVYVLTAGPATVKS 255

Query: 61  VYPIDLPRPRVMEEVRYEQRFIDISRRIWADLREEVHIA 99
           VYPIDLPRPRV+ ++RYEQ FID SR IWADL+EEV  +
Sbjct: 256 VYPIDLPRPRVVADIRYEQSFIDYSRTIWADLKEEVETS 294


>mll6978 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport
           system, ATPase component Mlo Mesorhizobium loti
          Length = 276

 Score =  112 bits (279), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 55/97 (56%), Positives = 71/97 (73%), Gaps = 1/97 (1%)

Query: 1   MDEPFSALDMQTRTLMQDELLRLWSAHSGSVVFVTHDLEEAIALADKVYVLTARP-ATLK 59
           MDEPFSALD+ TR LMQ+ELLRLW     +VV +THDLEEAIAL D+V VL A P + + 
Sbjct: 172 MDEPFSALDIHTRHLMQNELLRLWQEERRAVVMITHDLEEAIALGDRVVVLAAGPRSRVI 231

Query: 60  SVYPIDLPRPRVMEEVRYEQRFIDISRRIWADLREEV 96
             +P+DL RPR + E++ + RF+D+ R IW+ LR EV
Sbjct: 232 DSFPVDLQRPRDVAEIKLDPRFMDLYRNIWSSLRSEV 268


>RSc1199 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport
           system, ATPase component Rso Ralstonia solanacearum
          Length = 270

 Score =  111 bits (278), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 54/97 (55%), Positives = 73/97 (75%), Gaps = 1/97 (1%)

Query: 1   MDEPFSALDMQTRTLMQDELLRLWSAHSGSVVFVTHDLEEAIALADKVYVLTARPATLK- 59
           MDEPFSALD+QTR LM++E+L LW+A   +V+F+THDL+EAIA++D+V VL A P T   
Sbjct: 163 MDEPFSALDIQTRQLMENEVLDLWAAKRKAVLFITHDLDEAIAMSDRVVVLAAGPGTRPI 222

Query: 60  SVYPIDLPRPRVMEEVRYEQRFIDISRRIWADLREEV 96
             + IDLPRPR + E+R +  F+D+  RIW  LR+EV
Sbjct: 223 GEFAIDLPRPRDVAEIRDDAGFVDLHARIWGVLRDEV 259


>AGl1200 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport
           system, ATPase component Atu Agrobacterium tumefaciens
           strain C58 (Cereon)
          Length = 273

 Score =  108 bits (271), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 54/98 (55%), Positives = 70/98 (71%), Gaps = 1/98 (1%)

Query: 1   MDEPFSALDMQTRTLMQDELLRLWSAHSGSVVFVTHDLEEAIALADKVYVLTARPAT-LK 59
           MDEPFSALD+ TR LMQ+ELLRLW     +VV +THDLEEAIAL D+V VL A P + + 
Sbjct: 170 MDEPFSALDIHTRHLMQNELLRLWQEDRRAVVMITHDLEEAIALGDRVVVLAAGPKSRVI 229

Query: 60  SVYPIDLPRPRVMEEVRYEQRFIDISRRIWADLREEVH 97
             +P+DL RPR + E++ + +F+ + R IWA LR EV 
Sbjct: 230 ESFPVDLERPRNVAEIKLDPKFMTLYRDIWASLRGEVE 267


>SMc02346 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport
           system, ATPase component Sme Sinorhizobium meliloti
          Length = 278

 Score =  105 bits (261), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 53/99 (53%), Positives = 70/99 (70%), Gaps = 1/99 (1%)

Query: 1   MDEPFSALDMQTRTLMQDELLRLWSAHSGSVVFVTHDLEEAIALADKVYVLTARPATLKS 60
           MDEPF+ALD QTR ++Q ELLR+W     +VVFVTH ++EAI LAD+V V+TARPA +K 
Sbjct: 169 MDEPFAALDAQTRDILQSELLRIWEQIKTTVVFVTHSIDEAIYLADRVVVMTARPARVKE 228

Query: 61  VYPIDLPRPRVMEEVRYEQRFIDISRRIWADLREEVHIA 99
           +  IDLPRPR + ++R  + F     R+W  LR+EV  A
Sbjct: 229 IVEIDLPRPRDL-DIRNGEAFNAYRGRVWESLRDEVSKA 266