BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0165.p (116 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775383.1| endoribonuclease L-PSP protein [Herbaspirill... 238 2e-61 ref|YP_004752269.1| putative translation initiation inhibitor, y... 209 8e-53 ref|ZP_02379753.1| Endoribonuclease L-PSP [Burkholderia ubonensi... 190 5e-47 ref|ZP_04945878.1| hypothetical protein BDAG_01794 [Burkholderia... 189 1e-46 ref|YP_773249.1| endoribonuclease L-PSP [Burkholderia ambifaria ... 189 1e-46 ref|ZP_03570777.1| endoribonuclease L-PSP [Burkholderia multivor... 189 2e-46 ref|YP_620872.1| endoribonuclease L-PSP [Burkholderia cenocepaci... 189 2e-46 ref|YP_001579966.1| endoribonuclease L-PSP [Burkholderia multivo... 188 2e-46 ref|YP_001945926.1| yjgF family putative translation initiation ... 188 2e-46 ref|ZP_02892108.1| Endoribonuclease L-PSP [Burkholderia ambifari... 186 7e-46 >ref|YP_003775383.1| endoribonuclease L-PSP protein [Herbaspirillum seropedicae SmR1] gb|ADJ63475.1| endoribonuclease L-PSP protein [Herbaspirillum seropedicae SmR1] Length = 116 Score = 238 bits (607), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 116/116 (100%), Positives = 116/116 (100%) Query: 1 MSVQRLHVGNRLSEVAIHNGTVYLAGQIAEDTTQNIEGQTREVLGHIDRLLAEAGSDKSK 60 MSVQRLHVGNRLSEVAIHNGTVYLAGQIAEDTTQNIEGQTREVLGHIDRLLAEAGSDKSK Sbjct: 1 MSVQRLHVGNRLSEVAIHNGTVYLAGQIAEDTTQNIEGQTREVLGHIDRLLAEAGSDKSK 60 Query: 61 ILSCQIFLSDVKDFAGMNAVWDEWVAPGNAPPRATVEAKLARPELLVEIIIVAAQK 116 ILSCQIFLSDVKDFAGMNAVWDEWVAPGNAPPRATVEAKLARPELLVEIIIVAAQK Sbjct: 61 ILSCQIFLSDVKDFAGMNAVWDEWVAPGNAPPRATVEAKLARPELLVEIIIVAAQK 116 >ref|YP_004752269.1| putative translation initiation inhibitor, yjgF family [Collimonas fungivorans Ter331] gb|AEK61446.1| Putative translation initiation inhibitor, yjgF family [Collimonas fungivorans Ter331] Length = 116 Score = 209 bits (533), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 97/116 (83%), Positives = 107/116 (92%) Query: 1 MSVQRLHVGNRLSEVAIHNGTVYLAGQIAEDTTQNIEGQTREVLGHIDRLLAEAGSDKSK 60 M++QRLHVG RLSEVAIHNGT+YLAGQ+AEDTTQNIEGQTRE LGHIDRLL EAGSDK Sbjct: 1 MTIQRLHVGKRLSEVAIHNGTIYLAGQLAEDTTQNIEGQTRESLGHIDRLLVEAGSDKHH 60 Query: 61 ILSCQIFLSDVKDFAGMNAVWDEWVAPGNAPPRATVEAKLARPELLVEIIIVAAQK 116 ILSCQI+L+DVKDF GMNAVWD WV+ NAPPRATVEAKLARPE+L+EII+VAAQK Sbjct: 61 ILSCQIYLADVKDFDGMNAVWDSWVSASNAPPRATVEAKLARPEILIEIIVVAAQK 116 >ref|ZP_02379753.1| Endoribonuclease L-PSP [Burkholderia ubonensis Bu] Length = 117 Score = 190 bits (483), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 90/116 (77%), Positives = 102/116 (87%) Query: 1 MSVQRLHVGNRLSEVAIHNGTVYLAGQIAEDTTQNIEGQTREVLGHIDRLLAEAGSDKSK 60 M+V R HVG RLSE+AIHNGTVYLAGQIAEDTTQ I+GQTREVLGHIDRLLAEA SDK+ Sbjct: 1 MAVTRHHVGARLSEIAIHNGTVYLAGQIAEDTTQGIKGQTREVLGHIDRLLAEANSDKAH 60 Query: 61 ILSCQIFLSDVKDFAGMNAVWDEWVAPGNAPPRATVEAKLARPELLVEIIIVAAQK 116 +LS QI++SD+ +FAGMN WD WVAPGN PPRATVEAKLA P LLVEI++VAAQ+ Sbjct: 61 LLSVQIYISDLANFAGMNEEWDAWVAPGNTPPRATVEAKLADPALLVEIVVVAAQR 116 >ref|ZP_04945878.1| hypothetical protein BDAG_01794 [Burkholderia dolosa AUO158] gb|EAY69049.1| hypothetical protein BDAG_01794 [Burkholderia dolosa AUO158] Length = 117 Score = 189 bits (480), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 90/116 (77%), Positives = 102/116 (87%) Query: 1 MSVQRLHVGNRLSEVAIHNGTVYLAGQIAEDTTQNIEGQTREVLGHIDRLLAEAGSDKSK 60 M+V R HVG RLSE AIHNGTVYL+GQIAEDTTQ+I+GQTREVLGHIDRLLAEA SDK+ Sbjct: 1 MAVIRHHVGPRLSETAIHNGTVYLSGQIAEDTTQDIKGQTREVLGHIDRLLAEANSDKAH 60 Query: 61 ILSCQIFLSDVKDFAGMNAVWDEWVAPGNAPPRATVEAKLARPELLVEIIIVAAQK 116 +LS QI+LSD+ +F GMN VWD WVAPGN PPRATVEAKLA P LLVEI++VAAQ+ Sbjct: 61 LLSVQIYLSDLANFEGMNEVWDAWVAPGNTPPRATVEAKLADPALLVEIVVVAAQR 116 >ref|YP_773249.1| endoribonuclease L-PSP [Burkholderia ambifaria AMMD] ref|ZP_02907595.1| Endoribonuclease L-PSP [Burkholderia ambifaria MEX-5] gb|ABI86915.1| Endoribonuclease L-PSP [Burkholderia ambifaria AMMD] gb|EDT41256.1| Endoribonuclease L-PSP [Burkholderia ambifaria MEX-5] Length = 117 Score = 189 bits (480), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 90/116 (77%), Positives = 102/116 (87%) Query: 1 MSVQRLHVGNRLSEVAIHNGTVYLAGQIAEDTTQNIEGQTREVLGHIDRLLAEAGSDKSK 60 M+V R HVG RLSE AIHNGTVYLAGQIAEDTTQ+I+GQTREVLGHIDRLLAEA SDK+ Sbjct: 1 MAVIRHHVGARLSETAIHNGTVYLAGQIAEDTTQDIKGQTREVLGHIDRLLAEANSDKAH 60 Query: 61 ILSCQIFLSDVKDFAGMNAVWDEWVAPGNAPPRATVEAKLARPELLVEIIIVAAQK 116 +LS QI++SD+ +F GMNA WD WVAPGN PPRATVEAKLA P LLVEI++VAAQ+ Sbjct: 61 LLSVQIYISDLANFEGMNAEWDAWVAPGNTPPRATVEAKLADPALLVEIVVVAAQR 116 >ref|ZP_03570777.1| endoribonuclease L-PSP [Burkholderia multivorans CGD2M] ref|ZP_03577728.1| endoribonuclease L-PSP [Burkholderia multivorans CGD2] ref|ZP_03587874.1| endoribonuclease L-PSP [Burkholderia multivorans CGD1] gb|EED97611.1| endoribonuclease L-PSP [Burkholderia multivorans CGD1] gb|EEE07998.1| endoribonuclease L-PSP [Burkholderia multivorans CGD2] gb|EEE14064.1| endoribonuclease L-PSP [Burkholderia multivorans CGD2M] Length = 140 Score = 189 bits (479), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 90/116 (77%), Positives = 101/116 (87%) Query: 1 MSVQRLHVGNRLSEVAIHNGTVYLAGQIAEDTTQNIEGQTREVLGHIDRLLAEAGSDKSK 60 M+V R HVG RLSE AIHNGTVYL+GQIAEDTTQ+I GQTREVLGHIDRLLAEA SDK+ Sbjct: 24 MAVIRHHVGPRLSETAIHNGTVYLSGQIAEDTTQDIRGQTREVLGHIDRLLAEANSDKAH 83 Query: 61 ILSCQIFLSDVKDFAGMNAVWDEWVAPGNAPPRATVEAKLARPELLVEIIIVAAQK 116 +LS QI+LSD+ +F GMNA WD WVAPGN PPRATVEAKLA P LLVEI++VAAQ+ Sbjct: 84 LLSVQIYLSDLANFEGMNAEWDAWVAPGNTPPRATVEAKLADPALLVEIVVVAAQR 139 >ref|YP_620872.1| endoribonuclease L-PSP [Burkholderia cenocepacia AU 1054] ref|YP_835117.1| endoribonuclease L-PSP [Burkholderia cenocepacia HI2424] ref|YP_001764747.1| endoribonuclease L-PSP [Burkholderia cenocepacia MC0-3] ref|YP_001808101.1| endoribonuclease L-PSP [Burkholderia ambifaria MC40-6] ref|YP_002230610.1| endoribonuclease L-PSP family protein [Burkholderia cenocepacia J2315] gb|ABF75899.1| Endoribonuclease L-PSP [Burkholderia cenocepacia AU 1054] gb|ABK08224.1| Endoribonuclease L-PSP [Burkholderia cenocepacia HI2424] gb|ACA90625.1| Endoribonuclease L-PSP [Burkholderia cenocepacia MC0-3] gb|ACB63885.1| Endoribonuclease L-PSP [Burkholderia ambifaria MC40-6] emb|CAR51778.1| endoribonuclease L-PSP family protein [Burkholderia cenocepacia J2315] Length = 117 Score = 189 bits (479), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 90/116 (77%), Positives = 101/116 (87%) Query: 1 MSVQRLHVGNRLSEVAIHNGTVYLAGQIAEDTTQNIEGQTREVLGHIDRLLAEAGSDKSK 60 M+V R HVG RLSE AIHNGTVYLAGQIAEDTTQ+I GQTREVLGHIDRLLAEA SDK+ Sbjct: 1 MAVIRHHVGARLSETAIHNGTVYLAGQIAEDTTQDIRGQTREVLGHIDRLLAEANSDKAH 60 Query: 61 ILSCQIFLSDVKDFAGMNAVWDEWVAPGNAPPRATVEAKLARPELLVEIIIVAAQK 116 +LS QI++SD+ +F GMNA WD WVAPGN PPRATVEAKLA P LLVEI++VAAQ+ Sbjct: 61 LLSVQIYISDLANFEGMNAEWDAWVAPGNTPPRATVEAKLADPALLVEIVVVAAQR 116 >ref|YP_001579966.1| endoribonuclease L-PSP [Burkholderia multivorans ATCC 17616] gb|ABX15469.1| Endoribonuclease L-PSP [Burkholderia multivorans ATCC 17616] Length = 140 Score = 188 bits (478), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 90/116 (77%), Positives = 101/116 (87%) Query: 1 MSVQRLHVGNRLSEVAIHNGTVYLAGQIAEDTTQNIEGQTREVLGHIDRLLAEAGSDKSK 60 M+V R HVG RLSE AIHNGTVYL+GQIAEDTTQ+I GQTREVLGHIDRLLAEA SDK+ Sbjct: 24 MAVIRHHVGPRLSETAIHNGTVYLSGQIAEDTTQDIRGQTREVLGHIDRLLAEANSDKAH 83 Query: 61 ILSCQIFLSDVKDFAGMNAVWDEWVAPGNAPPRATVEAKLARPELLVEIIIVAAQK 116 +LS QI+LSD+ +F GMNA WD WVAPGN PPRATVEAKLA P LLVEI++VAAQ+ Sbjct: 84 LLSVQIYLSDLANFEGMNAEWDAWVAPGNTPPRATVEAKLADPALLVEIVVVAAQR 139 >ref|YP_001945926.1| yjgF family putative translation initiation inhibitor [Burkholderia multivorans ATCC 17616] dbj|BAG43390.1| yjgF family putative translation initiation inhibitor [Burkholderia multivorans ATCC 17616] Length = 117 Score = 188 bits (478), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 90/116 (77%), Positives = 101/116 (87%) Query: 1 MSVQRLHVGNRLSEVAIHNGTVYLAGQIAEDTTQNIEGQTREVLGHIDRLLAEAGSDKSK 60 M+V R HVG RLSE AIHNGTVYL+GQIAEDTTQ+I GQTREVLGHIDRLLAEA SDK+ Sbjct: 1 MAVIRHHVGPRLSETAIHNGTVYLSGQIAEDTTQDIRGQTREVLGHIDRLLAEANSDKAH 60 Query: 61 ILSCQIFLSDVKDFAGMNAVWDEWVAPGNAPPRATVEAKLARPELLVEIIIVAAQK 116 +LS QI+LSD+ +F GMNA WD WVAPGN PPRATVEAKLA P LLVEI++VAAQ+ Sbjct: 61 LLSVQIYLSDLANFEGMNAEWDAWVAPGNTPPRATVEAKLADPALLVEIVVVAAQR 116 >ref|ZP_02892108.1| Endoribonuclease L-PSP [Burkholderia ambifaria IOP40-10] gb|EDT02310.1| Endoribonuclease L-PSP [Burkholderia ambifaria IOP40-10] Length = 117 Score = 186 bits (473), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 89/116 (76%), Positives = 101/116 (87%) Query: 1 MSVQRLHVGNRLSEVAIHNGTVYLAGQIAEDTTQNIEGQTREVLGHIDRLLAEAGSDKSK 60 M+V R HVG RLSE AIHNGTVYLAGQIAEDTTQ+I GQTREVLGHIDRLLAEA SDK+ Sbjct: 1 MAVIRHHVGARLSETAIHNGTVYLAGQIAEDTTQDIRGQTREVLGHIDRLLAEANSDKAH 60 Query: 61 ILSCQIFLSDVKDFAGMNAVWDEWVAPGNAPPRATVEAKLARPELLVEIIIVAAQK 116 +LS QI++S++ +F GMNA WD WVAPGN PPRATVEAKLA P LLVEI++VAAQ+ Sbjct: 61 LLSVQIYISELANFDGMNAEWDAWVAPGNTPPRATVEAKLADPALLVEIVVVAAQR 116