BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0158.p (169 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775379.1| 6,7-dimethyl-8-ribityllumazine synthase [Her... 344 2e-93 ref|YP_001100354.1| riboflavin synthase subunit beta [Herminiimo... 234 3e-60 ref|YP_001353035.1| riboflavin synthase subunit beta [Janthinoba... 234 4e-60 ref|YP_004754714.1| 6,7-dimethyl-8-ribityllumazine synthase [Col... 225 2e-57 ref|ZP_07777097.1| riboflavin synthase beta chain [Pseudomonas f... 223 6e-57 ref|YP_002874268.1| riboflavin synthase subunit beta [Pseudomona... 221 3e-56 ref|YP_004355724.1| riboflavin synthase [Pseudomonas brassicacea... 220 5e-56 ref|YP_261592.1| riboflavin synthase subunit beta [Pseudomonas f... 218 2e-55 ref|YP_004472758.1| 6,7-dimethyl-8-ribityllumazine synthase [Pse... 218 3e-55 ref|NP_791663.1| 6,7-dimethyl-8-ribityllumazine synthase [Pseudo... 217 5e-55 >ref|YP_003775379.1| 6,7-dimethyl-8-ribityllumazine synthase [Herbaspirillum seropedicae SmR1] gb|ADJ63471.1| 6,7-dimethyl-8-ribityllumazine synthase (riboflavin synthase beta chain) protein [Herbaspirillum seropedicae SmR1] Length = 169 Score = 344 bits (883), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 169/169 (100%), Positives = 169/169 (100%) Query: 1 MSQSHLSAVSSHHGQRIAFIQACWHKDIVDQCRIAFTEEMAKLGWPAASIDFFELPGAFE 60 MSQSHLSAVSSHHGQRIAFIQACWHKDIVDQCRIAFTEEMAKLGWPAASIDFFELPGAFE Sbjct: 1 MSQSHLSAVSSHHGQRIAFIQACWHKDIVDQCRIAFTEEMAKLGWPAASIDFFELPGAFE 60 Query: 61 IPLHAKVLAKTGRYAGIVASGLVVDGGIYRHDFVAQSVISALMQVQLDTEVPVFSAVLTP 120 IPLHAKVLAKTGRYAGIVASGLVVDGGIYRHDFVAQSVISALMQVQLDTEVPVFSAVLTP Sbjct: 61 IPLHAKVLAKTGRYAGIVASGLVVDGGIYRHDFVAQSVISALMQVQLDTEVPVFSAVLTP 120 Query: 121 HHFHSHSEHHDYFHQHFLVKGREAAQACATTVAKLAQVRAGAQASLNAA 169 HHFHSHSEHHDYFHQHFLVKGREAAQACATTVAKLAQVRAGAQASLNAA Sbjct: 121 HHFHSHSEHHDYFHQHFLVKGREAAQACATTVAKLAQVRAGAQASLNAA 169 >ref|YP_001100354.1| riboflavin synthase subunit beta [Herminiimonas arsenicoxydans] emb|CAL62231.1| 6,7-dimethyl-8-ribityllumazine synthase 2 (DMRL synthase 2) (Lumazine synthase 2) (Riboflavin synthase 2 beta chain) [Herminiimonas arsenicoxydans] Length = 167 Score = 234 bits (598), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 111/154 (72%), Positives = 128/154 (83%) Query: 15 QRIAFIQACWHKDIVDQCRIAFTEEMAKLGWPAASIDFFELPGAFEIPLHAKVLAKTGRY 74 +RIAFIQA WHK+IVDQCRIAF EEMA G+ A IDFFE+ GAFEIPLHAKVLAK+GRY Sbjct: 14 RRIAFIQASWHKEIVDQCRIAFVEEMAARGYSADVIDFFEVAGAFEIPLHAKVLAKSGRY 73 Query: 75 AGIVASGLVVDGGIYRHDFVAQSVISALMQVQLDTEVPVFSAVLTPHHFHSHSEHHDYFH 134 A IV +GLVVDGG+YRH+FV+Q+VIS LMQVQL+TEVPV SAVLTPHHFHSH EH +F Sbjct: 74 AAIVGTGLVVDGGVYRHEFVSQAVISGLMQVQLETEVPVISAVLTPHHFHSHDEHQGFFF 133 Query: 135 QHFLVKGREAAQACATTVAKLAQVRAGAQASLNA 168 QHFLVKG+EAA ACA T+ +L Q+ A Q + A Sbjct: 134 QHFLVKGKEAAHACADTIQRLQQIDAMTQERIAA 167 >ref|YP_001353035.1| riboflavin synthase subunit beta [Janthinobacterium sp. Marseille] gb|ABR88799.1| riboflavin synthase beta chain [Janthinobacterium sp. Marseille] Length = 167 Score = 234 bits (597), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 109/154 (70%), Positives = 130/154 (84%) Query: 15 QRIAFIQACWHKDIVDQCRIAFTEEMAKLGWPAASIDFFELPGAFEIPLHAKVLAKTGRY 74 +RIAFIQA WHK+IVDQCRIAF EMA+ G+ SIDFFE+ GAFEIPLHAKVLAK+GRY Sbjct: 14 RRIAFIQASWHKEIVDQCRIAFIAEMAERGYTEDSIDFFEVAGAFEIPLHAKVLAKSGRY 73 Query: 75 AGIVASGLVVDGGIYRHDFVAQSVISALMQVQLDTEVPVFSAVLTPHHFHSHSEHHDYFH 134 A +V +GLVVDGG+YRH+FV+Q+VIS LMQVQL+TEVPV SAVLTPHHFHSH EH ++F Sbjct: 74 AAVVGTGLVVDGGVYRHEFVSQAVISGLMQVQLETEVPVISAVLTPHHFHSHDEHQNFFF 133 Query: 135 QHFLVKGREAAQACATTVAKLAQVRAGAQASLNA 168 QHFLVKG+EAA ACA T+A+L ++ A Q + A Sbjct: 134 QHFLVKGKEAAHACADTIARLQKIEALTQERIAA 167 >ref|YP_004754714.1| 6,7-dimethyl-8-ribityllumazine synthase [Collimonas fungivorans Ter331] gb|AEK63891.1| 6,7-dimethyl-8-ribityllumazine synthase [Collimonas fungivorans Ter331] Length = 215 Score = 225 bits (573), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 111/167 (66%), Positives = 130/167 (77%), Gaps = 3/167 (1%) Query: 1 MSQSHLSAVSSHH---GQRIAFIQACWHKDIVDQCRIAFTEEMAKLGWPAASIDFFELPG 57 M Q H AV G+RIAFIQA WH+DIVDQCRIAF E+AK G+ IDFFE+ G Sbjct: 42 MQQQHNPAVDRSKTPCGERIAFIQAGWHRDIVDQCRIAFIAEIAKAGYSEQDIDFFEVAG 101 Query: 58 AFEIPLHAKVLAKTGRYAGIVASGLVVDGGIYRHDFVAQSVISALMQVQLDTEVPVFSAV 117 AFEIPLHAK+LA + RYA +VA+GLVVDGGIYRH+FVAQ+VIS LMQVQL+T VPV SAV Sbjct: 102 AFEIPLHAKLLANSSRYAAVVATGLVVDGGIYRHEFVAQAVISGLMQVQLETGVPVLSAV 161 Query: 118 LTPHHFHSHSEHHDYFHQHFLVKGREAAQACATTVAKLAQVRAGAQA 164 LTPHHFH+ EHH YF +HFLVKG EAA+ACA T+ KL +++G A Sbjct: 162 LTPHHFHAGEEHHKYFFEHFLVKGAEAARACADTIQKLRLLKSGQPA 208 >ref|ZP_07777097.1| riboflavin synthase beta chain [Pseudomonas fluorescens WH6] gb|EFQ61778.1| riboflavin synthase beta chain [Pseudomonas fluorescens WH6] Length = 169 Score = 223 bits (569), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 105/153 (68%), Positives = 125/153 (81%) Query: 7 SAVSSHHGQRIAFIQACWHKDIVDQCRIAFTEEMAKLGWPAASIDFFELPGAFEIPLHAK 66 S +HHG+R+AFIQACWHKDIVDQ R F EM G+ + IDFFE+ GAFE+PLHAK Sbjct: 8 SKSKNHHGERVAFIQACWHKDIVDQSRKGFLAEMLVQGYQESDIDFFEVGGAFEMPLHAK 67 Query: 67 VLAKTGRYAGIVASGLVVDGGIYRHDFVAQSVISALMQVQLDTEVPVFSAVLTPHHFHSH 126 +LAKTGRYAGIVA+ LVVDGGIYRH+FVAQSV+S LMQVQL+TEVPVFS LTPHHFH+ Sbjct: 68 LLAKTGRYAGIVAAALVVDGGIYRHEFVAQSVVSGLMQVQLETEVPVFSVSLTPHHFHAG 127 Query: 127 SEHHDYFHQHFLVKGREAAQACATTVAKLAQVR 159 SEHH +FH HF+ KG+EAA+ CA T+ K+ +R Sbjct: 128 SEHHAFFHDHFVHKGQEAARTCADTLHKVRAIR 160 >ref|YP_002874268.1| riboflavin synthase subunit beta [Pseudomonas fluorescens SBW25] emb|CAY51572.1| 6,7-dimethyl-8-ribityllumazine synthase [Pseudomonas fluorescens SBW25] Length = 169 Score = 221 bits (562), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 103/153 (67%), Positives = 125/153 (81%) Query: 7 SAVSSHHGQRIAFIQACWHKDIVDQCRIAFTEEMAKLGWPAASIDFFELPGAFEIPLHAK 66 S +HHG+R+AFIQACWHKDIVDQ R F EM G+ + IDFFE+ GAFE+PLHAK Sbjct: 8 SKSKNHHGERVAFIQACWHKDIVDQSRKGFLAEMIAQGYQESDIDFFEVGGAFEMPLHAK 67 Query: 67 VLAKTGRYAGIVASGLVVDGGIYRHDFVAQSVISALMQVQLDTEVPVFSAVLTPHHFHSH 126 +LAKTGRYAGIVA+ LVVDGGIYRH+FVAQSV+S LMQVQL+TEVPVFS LTPHHFH+ Sbjct: 68 LLAKTGRYAGIVAAALVVDGGIYRHEFVAQSVVSGLMQVQLETEVPVFSVSLTPHHFHAG 127 Query: 127 SEHHDYFHQHFLVKGREAAQACATTVAKLAQVR 159 SEH +F++HF+ KG+EAA+ CA T+ K+ +R Sbjct: 128 SEHTTFFYEHFVHKGQEAARTCADTLHKVRAIR 160 >ref|YP_004355724.1| riboflavin synthase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gb|AEA70720.1| Riboflavin synthase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 169 Score = 220 bits (561), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 105/160 (65%), Positives = 126/160 (78%) Query: 7 SAVSSHHGQRIAFIQACWHKDIVDQCRIAFTEEMAKLGWPAASIDFFELPGAFEIPLHAK 66 S SH G+R+AFIQACWHK+IVDQ R F EM G+ + IDFFE+ GAFEIPLHAK Sbjct: 8 SKSKSHPGERVAFIQACWHKEIVDQSRKGFVAEMITQGYQESDIDFFEVGGAFEIPLHAK 67 Query: 67 VLAKTGRYAGIVASGLVVDGGIYRHDFVAQSVISALMQVQLDTEVPVFSAVLTPHHFHSH 126 +LAK+GRYAGIVA+GLVVDGGIYRH+FVAQSVIS LMQVQL+TEVPVFS VLTPHHFH+ Sbjct: 68 LLAKSGRYAGIVAAGLVVDGGIYRHEFVAQSVISGLMQVQLETEVPVFSVVLTPHHFHAG 127 Query: 127 SEHHDYFHQHFLVKGREAAQACATTVAKLAQVRAGAQASL 166 EH +F +HF+ KG+EAA+ CA T+ K +R Q ++ Sbjct: 128 EEHQKFFFEHFVHKGQEAAKTCADTLHKTRALRRSEQRAV 167 >ref|YP_261592.1| riboflavin synthase subunit beta [Pseudomonas fluorescens Pf-5] gb|AAY93755.1| 6,7-dimethyl-8-ribityllumazine synthase [Pseudomonas fluorescens Pf-5] Length = 169 Score = 218 bits (556), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 104/167 (62%), Positives = 129/167 (77%), Gaps = 1/167 (0%) Query: 1 MSQSHLSAVSSHH-GQRIAFIQACWHKDIVDQCRIAFTEEMAKLGWPAASIDFFELPGAF 59 M + + + S HH +R+AFIQACWHK+IVDQ R F EM G+ + IDFFE+ GAF Sbjct: 1 MQPTAIDSKSKHHPNERVAFIQACWHKEIVDQSRQGFVTEMLAQGYQESDIDFFEVGGAF 60 Query: 60 EIPLHAKVLAKTGRYAGIVASGLVVDGGIYRHDFVAQSVISALMQVQLDTEVPVFSAVLT 119 EIPLHAK+LAK+GRY GIVA+GLVVDGGIYRH+FVAQSVIS LMQVQL+TEVPVFS VLT Sbjct: 61 EIPLHAKLLAKSGRYTGIVAAGLVVDGGIYRHEFVAQSVISGLMQVQLETEVPVFSVVLT 120 Query: 120 PHHFHSHSEHHDYFHQHFLVKGREAAQACATTVAKLAQVRAGAQASL 166 PHHFH+ EH +F +HF+ KG+EAA+ CA T+ K+ +R Q ++ Sbjct: 121 PHHFHAGEEHQKFFFEHFVHKGQEAARTCADTLQKVRALRRNEQRAV 167 >ref|YP_004472758.1| 6,7-dimethyl-8-ribityllumazine synthase [Pseudomonas fulva 12-X] gb|AEF20664.1| 6,7-dimethyl-8-ribityllumazine synthase [Pseudomonas fulva 12-X] Length = 153 Score = 218 bits (554), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 102/148 (68%), Positives = 124/148 (83%) Query: 11 SHHGQRIAFIQACWHKDIVDQCRIAFTEEMAKLGWPAASIDFFELPGAFEIPLHAKVLAK 70 S+ +R+AF+QACWH++IVDQ R AF EEM + G+ A+ ID FE+ GAFEIPLHAK LAK Sbjct: 4 SNSVRRVAFVQACWHREIVDQSRHAFIEEMQRQGYAASEIDCFEVGGAFEIPLHAKRLAK 63 Query: 71 TGRYAGIVASGLVVDGGIYRHDFVAQSVISALMQVQLDTEVPVFSAVLTPHHFHSHSEHH 130 +GRYAGIVA+GLVVDGGIYRH+FVAQ+VI LMQVQLDT+VPVFSAVLTPHHFH+ EH Sbjct: 64 SGRYAGIVAAGLVVDGGIYRHEFVAQAVIEGLMQVQLDTDVPVFSAVLTPHHFHAGEEHQ 123 Query: 131 DYFHQHFLVKGREAAQACATTVAKLAQV 158 +F +HFLVKG EAA+ CA T+ KL ++ Sbjct: 124 TFFREHFLVKGAEAARTCADTLRKLKEL 151 >ref|NP_791663.1| 6,7-dimethyl-8-ribityllumazine synthase [Pseudomonas syringae pv. tomato str. DC3000] ref|ZP_03396767.1| 6,7-dimethyl-8-ribityllumazine synthase [Pseudomonas syringae pv. tomato T1] ref|ZP_07233934.1| riboflavin synthase subunit beta [Pseudomonas syringae pv. tomato Max13] ref|ZP_07251365.1| riboflavin synthase subunit beta [Pseudomonas syringae pv. tomato K40] ref|ZP_07258475.1| riboflavin synthase subunit beta [Pseudomonas syringae pv. tomato NCPPB 1108] sp|Q885J3.1|RISB2_PSESM RecName: Full=6,7-dimethyl-8-ribityllumazine synthase 2; Short=DMRL synthase 2; Short=Lumazine synthase 2; AltName: Full=Riboflavin synthase 2 beta chain gb|AAO55358.1| 6,7-dimethyl-8-ribityllumazine synthase [Pseudomonas syringae pv. tomato str. DC3000] gb|EEB60111.1| 6,7-dimethyl-8-ribityllumazine synthase [Pseudomonas syringae pv. tomato T1] gb|EGH97515.1| riboflavin synthase subunit beta [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 170 Score = 217 bits (552), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 103/153 (67%), Positives = 119/153 (77%) Query: 7 SAVSSHHGQRIAFIQACWHKDIVDQCRIAFTEEMAKLGWPAASIDFFELPGAFEIPLHAK 66 S SH +R+AFIQACWHKDIVDQ R F EMAK G+ + ID FE+ GAFEIPLHAK Sbjct: 8 SKSKSHPNERVAFIQACWHKDIVDQSRKGFVAEMAKQGYAESDIDIFEVGGAFEIPLHAK 67 Query: 67 VLAKTGRYAGIVASGLVVDGGIYRHDFVAQSVISALMQVQLDTEVPVFSAVLTPHHFHSH 126 +LA TGRYAGIV + LVVDGGIYRH+FVAQSV+SALMQVQL+TEVPVFS VLTPHHFH+ Sbjct: 68 LLANTGRYAGIVGAALVVDGGIYRHEFVAQSVVSALMQVQLETEVPVFSVVLTPHHFHAG 127 Query: 127 SEHHDYFHQHFLVKGREAAQACATTVAKLAQVR 159 EH +F HF KG EAA+ CA T+ K+ +R Sbjct: 128 EEHQKFFFDHFSHKGEEAAKTCADTLNKVRSLR 160