BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0152.p (464 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775374.1| transmembrane sensor histidine kinase transc... 932 0.0 ref|YP_004754932.1| sensor histidine kinase [Collimonas fungivor... 592 e-167 ref|ZP_08274167.1| Sensor histidine kinase [Oxalobacteraceae bac... 505 e-141 ref|YP_585716.1| sensor signal transduction histidine kinase [Cu... 470 e-130 ref|YP_297620.1| sensor histidine kinase [Ralstonia eutropha JMP... 470 e-130 ref|YP_728133.1| signal transduction histidine kinase [Ralstonia... 469 e-130 ref|YP_004687433.1| signal transduction histidine kinase [Cupria... 466 e-129 ref|YP_001020224.1| putative transmembrane sensor histidine kina... 466 e-129 ref|YP_002007144.1| senson histidine kinase [Cupriavidus taiwane... 464 e-128 ref|YP_001862546.1| integral membrane sensor signal transduction... 463 e-128 >ref|YP_003775374.1| transmembrane sensor histidine kinase transcription regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ63466.1| transmembrane sensor histidine kinase transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 464 Score = 932 bits (2408), Expect = 0.0, Method: Compositional matrix adjust. Identities = 462/464 (99%), Positives = 463/464 (99%) Query: 1 MKLRQKIIFLAIVPLCLAFTAIALVVRYQAVELASQQRAAVEAAYLASKNTELRHYVDLA 60 MKLRQKIIFLAIVPLCLAFTAIALVVRYQAVELASQQRAAVEAAYLASKNTELRHYVDLA Sbjct: 1 MKLRQKIIFLAIVPLCLAFTAIALVVRYQAVELASQQRAAVEAAYLASKNTELRHYVDLA 60 Query: 61 QHALAHLYDTGRTDDAIKEEARHLLADLEFGDDGYFFVYDDTGRSIMHPRQPELVGSEMW 120 QHALAHLYDTGRTDDAIKEEARHLLADLEFGDDGYFFVYDDTGRSIMHPRQPELVGSEMW Sbjct: 61 QHALAHLYDTGRTDDAIKEEARHLLADLEFGDDGYFFVYDDTGRSIMHPRQPELVGSEMW 120 Query: 121 NWRDASGSFTIQHLIERARQGGGYERYLWRKPSSKTVAPKLGYVISLPRWGWVIGTGIYL 180 NWRDASGSFTIQHLIERARQGGGYERYLWRKPSSKTVAPKLGYVISLPRWGWVIGTGIYL Sbjct: 121 NWRDASGSFTIQHLIERARQGGGYERYLWRKPSSKTVAPKLGYVISLPRWGWVIGTGIYL 180 Query: 181 DDVEAALAQIDRQNSGYLHQTLLLIASIALASALAVGLAGLLLNLSEHRVADAKLRQLAQ 240 DDVEAALAQIDRQNSGYLHQTLLLIASIALASALAVGLAGLLLNLSEHRVADAKLRQLAQ Sbjct: 181 DDVEAALAQIDRQNSGYLHQTLLLIASIALASALAVGLAGLLLNLSEHRVADAKLRQLAQ 240 Query: 241 RVVRSQEEERARLSRDLHDGISQWLVSIKLQIEAALVRLNGTPEQAATGRSGFEKTATQI 300 RVVRSQEEERARLSRDLHDGISQWLVSIKLQIEAALVRLNGTPEQAAT R+GFEKTATQI Sbjct: 241 RVVRSQEEERARLSRDLHDGISQWLVSIKLQIEAALVRLNGTPEQAATARAGFEKTATQI 300 Query: 301 NGVLAEVRRISHDLRPAILDDLGLAAALEHLCGEWRDAAGAGVEIVFENQAQADDGATLP 360 NGVLAEVRRISHDLRPAILDDLGLAAALEHLCGEWRDAAGAGVEIVFENQAQADDGATLP Sbjct: 301 NGVLAEVRRISHDLRPAILDDLGLAAALEHLCGEWRDAAGAGVEIVFENQAQADDGATLP 360 Query: 361 DVVNTVLFRIAQEALTNIARHAGASRIKVRLYQGHNLLMLQVQDNGHGFDLGQVDDHSRH 420 DVVNTVLFRIAQEALTNIARHAGASRIKVRLYQGHNLLMLQVQDNGHGFDLGQVDDHSRH Sbjct: 361 DVVNTVLFRIAQEALTNIARHAGASRIKVRLYQGHNLLMLQVQDNGHGFDLGQVDDHSRH 420 Query: 421 GIGLRNMRERIEAVGGELGIDSSPAGTSISAVIARASLPSLIPA 464 GIGLRNMRERIEAVGGELGIDSSPAGTSISAVIARASLPSLIPA Sbjct: 421 GIGLRNMRERIEAVGGELGIDSSPAGTSISAVIARASLPSLIPA 464 >ref|YP_004754932.1| sensor histidine kinase [Collimonas fungivorans Ter331] gb|AEK64109.1| Sensor histidine kinase [Collimonas fungivorans Ter331] Length = 456 Score = 592 bits (1526), Expect = e-167, Method: Compositional matrix adjust. Identities = 293/453 (64%), Positives = 357/453 (78%), Gaps = 5/453 (1%) Query: 1 MKLRQKIIFLAIVPLCLAFTAIALVVRYQAVELASQQRAAVEAAYLASKNTELRHYVDLA 60 MKLRQKIIFLAIVPL LA AIAL VR+QA+ L QQR ++AAYLASK EL+HYV+LA Sbjct: 1 MKLRQKIIFLAIVPLILALCAIALAVRHQAIALGQQQRTTIQAAYLASKEAELKHYVELA 60 Query: 61 QHALAHLYDTGRTDDAIKEEARHLLADLEFGDDGYFFVYDDTGRSIMHPRQPELVGSEMW 120 ++AHLYD+GR D A +EA +L+ L +GDDGYFF+YD G+S+MHPRQPELVG ++W Sbjct: 61 TWSIAHLYDSGRKDQATLDEAMAILSKLSYGDDGYFFIYDMQGKSLMHPRQPELVGRDLW 120 Query: 121 NWRDASGSFTIQHLIERARQGGGYERYLWRKPSSKTVAPKLGYVISLPRWGWVIGTGIYL 180 + +DA G+ TIQHLIERAR GGG+ERY W KPSS VA KLGYV++LP WGW++GTGIY+ Sbjct: 121 DMKDAEGNLTIQHLIERARSGGGFERYQWEKPSSHHVASKLGYVVALPNWGWMLGTGIYM 180 Query: 181 DDVEAALAQIDRQNSGYLHQTLLLIASIALASALAVGLAGLLLNLSEHRVADAKLRQLAQ 240 DDV+AAL++ID Q SG + T+ IA IA+ SAL VG +GL+LN+SEHRVADAKL+ LAQ Sbjct: 181 DDVDAALSKIDTQVSGNIRNTMWWIAGIAILSALVVGASGLVLNISEHRVADAKLKVLAQ 240 Query: 241 RVVRSQEEERARLSRDLHDGISQWLVSIKLQIEAALVRLNGTPEQAATGRSGFEKTATQI 300 RVVRSQEEERARLSRDLHDGISQWLVSIKLQIEA + +L+ P+Q A R+ FE+TA Q+ Sbjct: 241 RVVRSQEEERARLSRDLHDGISQWLVSIKLQIEAGIAKLDNGPQQTAAARATFERTAGQL 300 Query: 301 NGVLAEVRRISHDLRPAILDDLGLAAALEHLCGEWRDAAGAGVEIVFENQAQADDGATLP 360 N VL EVRRISHDLRPAILDDLGLAAAL HL EW + AG+ I F++ D +P Sbjct: 301 NDVLGEVRRISHDLRPAILDDLGLAAALSHLTREWLEH--AGIPIDFQHSGNTDG---MP 355 Query: 361 DVVNTVLFRIAQEALTNIARHAGASRIKVRLYQGHNLLMLQVQDNGHGFDLGQVDDHSRH 420 V NTVLFRIAQEALTNIARH+ A++I++RL + L V DNG GFD+ Q+D + +H Sbjct: 356 AVANTVLFRIAQEALTNIARHSQATQIEIRLQGDAQAITLAVHDNGVGFDVDQIDGNPKH 415 Query: 421 GIGLRNMRERIEAVGGELGIDSSPAGTSISAVI 453 GIGLRNM ER+EAVGG+L I SS AGT++ A + Sbjct: 416 GIGLRNMVERLEAVGGQLKISSSAAGTTVLATV 448 >ref|ZP_08274167.1| Sensor histidine kinase [Oxalobacteraceae bacterium IMCC9480] gb|EGF32364.1| Sensor histidine kinase [Oxalobacteraceae bacterium IMCC9480] Length = 451 Score = 505 bits (1300), Expect = e-141, Method: Compositional matrix adjust. Identities = 263/453 (58%), Positives = 326/453 (71%), Gaps = 5/453 (1%) Query: 1 MKLRQKIIFLAIVPLCLAFTAIALVVRYQAVELASQQRAAVEAAYLASKNTELRHYVDLA 60 M LR KI LA+VPL A AIAL V+YQ+ LA QQR +VE+AYL+SK E+RHYV LA Sbjct: 1 MNLRHKIFLLAVVPLIAALCAIALAVQYQSALLAQQQRNSVESAYLSSKEAEMRHYVTLA 60 Query: 61 QHALAHLYDTGRTDDAIKEEARHLLADLEFGDDGYFFVYDDTGRSIMHPRQPELVGSEMW 120 ++ +YD+GR D +EA+ ++++L++GDDGYFFVYD G +++HPRQPELVG +W Sbjct: 61 TRSIKEIYDSGRQDTQALDEAKQIISNLDYGDDGYFFVYDMQGVNLVHPRQPELVGRNLW 120 Query: 121 NWRDASGSFTIQHLIERARQGGGYERYLWRKPSSKTVAPKLGYVISLPRWGWVIGTGIYL 180 RD G+ TIQ LI RA GGG ERYLW KPS++ V PKLGYVISLPRWGWVIGTGIYL Sbjct: 121 ELRDIKGNPTIQRLIFRASHGGGLERYLWEKPSTRKVVPKLGYVISLPRWGWVIGTGIYL 180 Query: 181 DDVEAALAQIDRQNSGYLHQTLLLIASIALASALAVGLAGLLLNLSEHRVADAKLRQLAQ 240 DDV+A + +ID Q S + T+L I IA+AS LA+ L GL LN SEHRVADAKLR LAQ Sbjct: 181 DDVDAVVNKIDGQISHNIQSTMLWITGIAIASVLAIALFGLALNFSEHRVADAKLRVLAQ 240 Query: 241 RVVRSQEEERARLSRDLHDGISQWLVSIKLQIEAALVRLNGTPEQAATGRSGFEKTATQI 300 RVV SQEEERARLSRDLHDGISQWLVSIKLQ+E+ + +L G+ QA + R F++ ATQ+ Sbjct: 241 RVVHSQEEERARLSRDLHDGISQWLVSIKLQVESGIAKLAGSHAQADSARHSFDRAATQL 300 Query: 301 NGVLAEVRRISHDLRPAILDDLGLAAALEHLCGEWRDAAGAGVEIVFENQAQADDGATLP 360 N VL EVRRISHDLRPA+LDDLGLAAALE+L E+ D AG + + + + L Sbjct: 301 NDVLGEVRRISHDLRPALLDDLGLAAALEYLTREFADHAGLDISLSVDGPIE-----NLS 355 Query: 361 DVVNTVLFRIAQEALTNIARHAGASRIKVRLYQGHNLLMLQVQDNGHGFDLGQVDDHSRH 420 V TVLFRIAQEALTNI RHA A+ + + L + + + DNG GFD+ V + + Sbjct: 356 AVRKTVLFRIAQEALTNIERHAHATNVCLTLSGDTATVRMAISDNGKGFDMPLVAESPKR 415 Query: 421 GIGLRNMRERIEAVGGELGIDSSPAGTSISAVI 453 GIGLRNM ER EAV G+L + SS GT + ++ Sbjct: 416 GIGLRNMHERAEAVDGKLILTSSAEGTQLITIL 448 >ref|YP_585716.1| sensor signal transduction histidine kinase [Cupriavidus metallidurans CH34] gb|ABF10447.1| sensor signal transduction histidine kinase [Cupriavidus metallidurans CH34] Length = 475 Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust. Identities = 246/459 (53%), Positives = 315/459 (68%), Gaps = 5/459 (1%) Query: 1 MKLRQKIIFLAIVPLCLAFTAIALVVRYQAVELASQQRAAVEAAYLASKNTELRHYVDLA 60 MKLRQKI+ LA+ PL +A IAL VR+QA L +R VEAAYL SK TELRHYV+LA Sbjct: 14 MKLRQKILLLAVAPLAVAMLGIALAVRFQATALVRHERMLVEAAYLQSKETELRHYVELA 73 Query: 61 QHALAHLYDTGRTDDAIKEEARHLLADLEFGDDGYFFVYDDTGRSIMHPRQPELVGSEMW 120 Q A+A + +GRTD+A ++ A LA L++G DGYFF+YD GR++MHPRQPELVG ++W Sbjct: 74 QSAIAPMVKSGRTDEATRQAAMDALARLDYGRDGYFFLYDLQGRNLMHPRQPELVGQDLW 133 Query: 121 NWRDASGSFTIQHLIERARQGGGYERYLWRKPSSKTVAPKLGYVISLPRWGWVIGTGIYL 180 RD G+ TIQ L+ A+ GGG RYLW+KPSS+ VAPKLGYV+++P W W++GTGIYL Sbjct: 134 LLRDPEGALTIQKLVAAAKAGGGSVRYLWKKPSSQQVAPKLGYVVAVPAWNWMLGTGIYL 193 Query: 181 DDVEAALAQIDRQNSGYLHQTLLLIASIALASALAVGLAGLLLNLSEHRVADAKLRQLAQ 240 DDVE L Q+D + + +T+ I IA S L V +GL LN+SEHR ADAKLRQLAQ Sbjct: 194 DDVEQTLRQLDARAETDIRETMAWIGVIAAISILLVAASGLALNVSEHREADAKLRQLAQ 253 Query: 241 RVVRSQEEERARLSRDLHDGISQWLVSIKLQIEAALVRLNGTPEQAATGRSGFEKTATQI 300 RVV+SQEEERARLSR+LHDGISQ LVS+KL +EAA R+ P + A+ ++ Sbjct: 254 RVVQSQEEERARLSRELHDGISQLLVSVKLVLEAATNRIRLAPTEGASVAPILGMALNRL 313 Query: 301 NGVLAEVRRISHDLRPAILDDLGLAAALEHLCGEWRDAAGAGVEIVFENQAQADDGATLP 360 + V EVRR++ +LRPA+LDDLGL AAL+HL E + AG+ + I N Q +L Sbjct: 314 DSVFNEVRRVARNLRPALLDDLGLYAALQHLAREMQ--AGSTLTI---NVTQTGKPRSLA 368 Query: 361 DVVNTVLFRIAQEALTNIARHAGASRIKVRLYQGHNLLMLQVQDNGHGFDLGQVDDHSRH 420 D T LFRIAQEALTN+ RHA A+R+ V L L V+DNG GFD+ ++ Sbjct: 369 DEPATALFRIAQEALTNVERHAHATRVDVTLDFADRATRLTVRDNGTGFDVARMQVDPSR 428 Query: 421 GIGLRNMRERIEAVGGELGIDSSPAGTSISAVIARASLP 459 GIGLRN+RER+ A+GG I S+P GT ++A + A P Sbjct: 429 GIGLRNLRERVAALGGSFEILSAPTGTLLTASLPTAPQP 467 >ref|YP_297620.1| sensor histidine kinase [Ralstonia eutropha JMP134] gb|AAZ62776.1| ATP-binding region, ATPase-like:Histidine kinase, dimerization and phosphoacceptor region [Ralstonia eutropha JMP134] Length = 481 Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust. Identities = 245/453 (54%), Positives = 315/453 (69%), Gaps = 5/453 (1%) Query: 1 MKLRQKIIFLAIVPLCLAFTAIALVVRYQAVELASQQRAAVEAAYLASKNTELRHYVDLA 60 MKLRQKI+ LA+ PL +A IAL VR+QA +LA +RA VEAAY+ SK TELRHYV+LA Sbjct: 14 MKLRQKILLLAVAPLAVAMLGIALAVRFQATQLARHERALVEAAYIQSKETELRHYVELA 73 Query: 61 QHALAHLYDTGRTDDAIKEEARHLLADLEFGDDGYFFVYDDTGRSIMHPRQPELVGSEMW 120 Q A+A + +G TD A ++ A LA L++G DGYFF+YD GR++MHPRQPELVG ++W Sbjct: 74 QSAIAPMVRSGHTDAATRQAAMEALARLDYGPDGYFFLYDMQGRNLMHPRQPELVGQDLW 133 Query: 121 NWRDASGSFTIQHLIERARQGGGYERYLWRKPSSKTVAPKLGYVISLPRWGWVIGTGIYL 180 RD G+ TIQ LI A+ GGG RYLW+KPSS+ +APKLGYV+++P WGW++GTGIYL Sbjct: 134 TLRDPQGALTIQKLIAAAKAGGGSVRYLWKKPSSQQLAPKLGYVVAVPEWGWMLGTGIYL 193 Query: 181 DDVEAALAQIDRQNSGYLHQTLLLIASIALASALAVGLAGLLLNLSEHRVADAKLRQLAQ 240 DDVE L Q+D + + +T+ I IA S L V +GL LN+SEHR ADAKLRQLAQ Sbjct: 194 DDVENTLRQLDARAETDIRETMAWIGVIAAVSILLVAASGLALNISEHREADAKLRQLAQ 253 Query: 241 RVVRSQEEERARLSRDLHDGISQWLVSIKLQIEAALVRLNGTPEQAATGRSGFEKTATQI 300 RVV+SQEEERARLSR+LHDGISQ LVS+KL +EAA RL P + A ++ Sbjct: 254 RVVQSQEEERARLSRELHDGISQLLVSVKLVLEAAANRLRLAPAEGAAVAPVLGMALNRL 313 Query: 301 NGVLAEVRRISHDLRPAILDDLGLAAALEHLCGEWRDAAGAGVEIVFENQAQADDGATLP 360 + V EVRR++ +LRPA+LDDLG+ AAL+HL E + G+ +EI AQ LP Sbjct: 314 DTVFNEVRRVARNLRPALLDDLGIFAALQHLAREMQ--GGSQLEITV---AQRGAPRELP 368 Query: 361 DVVNTVLFRIAQEALTNIARHAGASRIKVRLYQGHNLLMLQVQDNGHGFDLGQVDDHSRH 420 D T L+RIAQEALTN+ RHAGA ++ V L + L V+D+G GFD+ ++ + Sbjct: 369 DEQATALYRIAQEALTNVERHAGARQVTVALVFDPDATSLTVRDDGRGFDVARMQLDPQR 428 Query: 421 GIGLRNMRERIEAVGGELGIDSSPAGTSISAVI 453 GIGLRN+RERI A+GG+ GI S GT + A + Sbjct: 429 GIGLRNLRERIAALGGQFGIVSGIGGTELVATL 461 >ref|YP_728133.1| signal transduction histidine kinase [Ralstonia eutropha H16] emb|CAJ94765.1| signal transduction histidine kinase [Ralstonia eutropha H16] Length = 468 Score = 469 bits (1206), Expect = e-130, Method: Compositional matrix adjust. Identities = 256/464 (55%), Positives = 321/464 (69%), Gaps = 10/464 (2%) Query: 1 MKLRQKIIFLAIVPLCLAFTAIALVVRYQAVELASQQRAAVEAAYLASKNTELRHYVDLA 60 MKLRQKI+ LA+ PL +A IAL VR+QA +LA +RA VEAAYL SK TELRHYV+LA Sbjct: 1 MKLRQKILLLAVAPLAVAMLGIALAVRFQATQLAQHERALVEAAYLQSKETELRHYVELA 60 Query: 61 QHALAHLYDTGRTDDAIKEEARHLLADLEFGDDGYFFVYDDTGRSIMHPRQPELVGSEMW 120 Q A+A L +GRTD A ++ A LA L++G DGYFF+YD GR++MHPRQPELVG ++W Sbjct: 61 QSAIAPLVRSGRTDAATRQAAMEALARLDYGPDGYFFLYDLHGRNLMHPRQPELVGQDLW 120 Query: 121 NWRDASGSFTIQHLIERARQGGGYERYLWRKPSSKTVAPKLGYVISLPRWGWVIGTGIYL 180 RD G+ TIQ LI A+ GGG RYLWRKPSS+ +APKLGYV+++P WGW++GTGIYL Sbjct: 121 TLRDPQGALTIQQLIAAAKGGGGAVRYLWRKPSSQQLAPKLGYVVAVPEWGWMVGTGIYL 180 Query: 181 DDVEAALAQIDRQNSGYLHQTLLLIASIALASALAVGLAGLLLNLSEHRVADAKLRQLAQ 240 DDVE+ L Q+D + + QT+ I IA S L V +GL LN+SEHR ADAKLRQLAQ Sbjct: 181 DDVESTLRQLDARAETDIRQTMAWIGVIAGISILLVAASGLALNVSEHREADAKLRQLAQ 240 Query: 241 RVVRSQEEERARLSRDLHDGISQWLVSIKLQIEAALVRLNGTPEQAATGRSGFEKTATQI 300 RVV+SQEEERARLSR+LHDGISQ LVS+KL +E A RL P + A ++ Sbjct: 241 RVVQSQEEERARLSRELHDGISQLLVSVKLVLETATNRLRLAPAEGAAVAPVLGMALNRL 300 Query: 301 NGVLAEVRRISHDLRPAILDDLGLAAALEHLCGEWRDAAGAGVEIVFENQAQADDGATLP 360 + V EVRR++ +LRPA+LDDLGL AAL+HL E + G+G+EI Q+ LP Sbjct: 301 DTVFNEVRRVARNLRPALLDDLGLYAALQHLAREMQ--GGSGLEIAV---TQSGTPRELP 355 Query: 361 DVVNTVLFRIAQEALTNIARHAGASRIKVRLYQGHNLLMLQVQDNGHGFDLGQVDDHSRH 420 D T LFRIAQEALTN+ RHAGA R+ V L + L V+D+GHGFD+ ++ + + Sbjct: 356 DEQATALFRIAQEALTNVERHAGARRVVVALAFDADATRLTVRDDGHGFDVARMQEDPQR 415 Query: 421 GIGLRNMRERIEAVGGELGIDSSPAGTSISAVIARASLPSLIPA 464 GIGLRN+RERI A+ G+ I S GT + ASLP PA Sbjct: 416 GIGLRNLRERIAALCGQFDIVSGMGGTQLV-----ASLPLARPA 454 >ref|YP_004687433.1| signal transduction histidine kinase [Cupriavidus necator N-1] gb|AEI78952.1| signal transduction histidine kinase [Cupriavidus necator N-1] Length = 468 Score = 466 bits (1198), Expect = e-129, Method: Compositional matrix adjust. Identities = 254/464 (54%), Positives = 320/464 (68%), Gaps = 10/464 (2%) Query: 1 MKLRQKIIFLAIVPLCLAFTAIALVVRYQAVELASQQRAAVEAAYLASKNTELRHYVDLA 60 MKLRQKI+ LA+ PL +A IAL VR+QA +LA +RA VEAAYL SK TELRHYV+LA Sbjct: 1 MKLRQKILLLAVAPLAVAMLGIALAVRFQATQLAQHERALVEAAYLQSKETELRHYVELA 60 Query: 61 QHALAHLYDTGRTDDAIKEEARHLLADLEFGDDGYFFVYDDTGRSIMHPRQPELVGSEMW 120 Q A+A L +GR+D A ++ A LA L++G DGYFF+YD GR++MHPRQPELVG ++W Sbjct: 61 QSAIAPLVRSGRSDAATRQAAMEALARLDYGPDGYFFLYDLQGRNLMHPRQPELVGQDLW 120 Query: 121 NWRDASGSFTIQHLIERARQGGGYERYLWRKPSSKTVAPKLGYVISLPRWGWVIGTGIYL 180 RD G+ TIQ LI A+ GGG RYLWRKPSS+ +APKLGYV+++P WGW++GTGIYL Sbjct: 121 TLRDPQGALTIQQLIAAAKGGGGAVRYLWRKPSSQQLAPKLGYVVAVPEWGWMLGTGIYL 180 Query: 181 DDVEAALAQIDRQNSGYLHQTLLLIASIALASALAVGLAGLLLNLSEHRVADAKLRQLAQ 240 DDVE+ L Q+D + + T+ I IA S L V +GL LN+SEHR ADAKLRQLAQ Sbjct: 181 DDVESTLRQLDARAETDIRATMAWIGVIAGISILLVAASGLALNVSEHREADAKLRQLAQ 240 Query: 241 RVVRSQEEERARLSRDLHDGISQWLVSIKLQIEAALVRLNGTPEQAATGRSGFEKTATQI 300 RVV+SQEEERARLSR+LHDGISQ LVS+KL +E A RL P + A ++ Sbjct: 241 RVVQSQEEERARLSRELHDGISQLLVSVKLVLETATNRLRLAPAEGAAVAPVLGMALNRL 300 Query: 301 NGVLAEVRRISHDLRPAILDDLGLAAALEHLCGEWRDAAGAGVEIVFENQAQADDGATLP 360 + V EVRR++ +LRPA+LDDLGL AAL+HL E + G+G+EI Q+ LP Sbjct: 301 DTVFNEVRRVARNLRPALLDDLGLYAALQHLAREMQ--GGSGLEIAV---TQSGTPRELP 355 Query: 361 DVVNTVLFRIAQEALTNIARHAGASRIKVRLYQGHNLLMLQVQDNGHGFDLGQVDDHSRH 420 D T LFRIAQEALTN+ RHAGA R+ V L + L V+D+GHGFD+ ++ + + Sbjct: 356 DEQATALFRIAQEALTNVERHAGARRVAVALAFDADATRLTVRDDGHGFDVARMQEDPQR 415 Query: 421 GIGLRNMRERIEAVGGELGIDSSPAGTSISAVIARASLPSLIPA 464 GIGLRN+RERI A+ G+ I S GT + ASLP PA Sbjct: 416 GIGLRNLRERIAALCGQFDIVSGMGGTQLV-----ASLPLARPA 454 >ref|YP_001020224.1| putative transmembrane sensor histidine kinase transcription regulator protein [Methylibium petroleiphilum PM1] gb|ABM93989.1| putative transmembrane sensor histidine kinase transcription regulator protein [Methylibium petroleiphilum PM1] Length = 456 Score = 466 bits (1198), Expect = e-129, Method: Compositional matrix adjust. Identities = 243/461 (52%), Positives = 316/461 (68%), Gaps = 8/461 (1%) Query: 1 MKLRQKIIFLAIVPLCLAFTAIALVVRYQAVELASQQRAAVEAAYLASKNTELRHYVDLA 60 M+L+ KI+ LA+VPL + IAL VR+Q LA+++R VE+AY++SK TELRHYV+LA Sbjct: 1 MRLKSKIVLLAVVPLLASIVLIALAVRHQERALAARERELVESAYMSSKRTELRHYVELA 60 Query: 61 QHALAHLYDTGRTDDAIKEEARHLLADLEFGDDGYFFVYDDTGRSIMHPRQPELVGSEMW 120 + +A LYD+G +A ++ A LLA L++G DGYFF+YD GRS+MHPRQPELVG+++W Sbjct: 61 RSTIAPLYDSGDDSEATRQAAMKLLASLDYGTDGYFFLYDLQGRSLMHPRQPELVGNDLW 120 Query: 121 NWRDASGSFTIQHLIERARQGGGYERYLWRKPSSKTVAPKLGYVISLPRWGWVIGTGIYL 180 RD +G TIQ LI +A +GGG+ YLWRKPS++ PKLGYVI+LPRW W++GTG+YL Sbjct: 121 ELRDEAGHPTIQQLIAKASEGGGFIDYLWRKPSTRQTTPKLGYVIALPRWNWMLGTGLYL 180 Query: 181 DDVEAALAQIDRQNSGYLHQTLLLIASIALASALAVGLAGLLLNLSEHRVADAKLRQLAQ 240 DDV+A +AQ+D Q + + T L IA IAL+ + + GL LNLSEH+ ADAKLRQLAQ Sbjct: 181 DDVQATMAQLDHQVAANIETTFLWIAGIALSGIALITVCGLALNLSEHKEADAKLRQLAQ 240 Query: 241 RVVRSQEEERARLSRDLHDGISQWLVSIKLQIEAALVRLNGTPEQAATGRSGFEKTATQI 300 +VV+SQE ERA LSR+LHDG SQ LVSIKL IE+A+ ++ P QAA E+ A ++ Sbjct: 241 QVVQSQESERAHLSRELHDGTSQTLVSIKLLIESAIEQIEREPAQAAV---PLERAAVRL 297 Query: 301 NGVLAEVRRISHDLRPAILDDLGLAAALEHLCGEWRDAAGAGVEIVFENQAQADDGATLP 360 L EVRRISH LRPA+LD LGL AALEHL E+ D +G + + LP Sbjct: 298 ADALTEVRRISHRLRPAMLDVLGLPAALEHLGREFGDHSGLAFSMRMRGPS-----IELP 352 Query: 361 DVVNTVLFRIAQEALTNIARHAGASRIKVRLYQGHNLLMLQVQDNGHGFDLGQVDDHSRH 420 D V TVLFR+ QEALTNI +HA A +++RL + L L + D+G GFDL V R Sbjct: 353 DDVKTVLFRVTQEALTNIEKHAAAQSVRIRLAFRPSGLRLAILDDGRGFDLAAVQLDPRR 412 Query: 421 GIGLRNMRERIEAVGGELGIDSSPAGTSISAVIARASLPSL 461 GIGLRNMRER+ ++GG I S T + A + A L L Sbjct: 413 GIGLRNMRERLASIGGSFRIRSRSGLTELIADVPEAQLRRL 453 >ref|YP_002007144.1| senson histidine kinase [Cupriavidus taiwanensis LMG 19424] emb|CAQ71083.1| putative SENSOR HISTIDINE KINASE [Cupriavidus taiwanensis LMG 19424] Length = 484 Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust. Identities = 254/464 (54%), Positives = 319/464 (68%), Gaps = 10/464 (2%) Query: 1 MKLRQKIIFLAIVPLCLAFTAIALVVRYQAVELASQQRAAVEAAYLASKNTELRHYVDLA 60 MKLRQKI+ LA+ PL +A IAL VR+QA +LA +R VEAAYL SK TELRHYV+LA Sbjct: 17 MKLRQKILLLAVAPLAVAMLGIALAVRFQATQLAQHERELVEAAYLQSKETELRHYVELA 76 Query: 61 QHALAHLYDTGRTDDAIKEEARHLLADLEFGDDGYFFVYDDTGRSIMHPRQPELVGSEMW 120 Q A+A L +GR D A ++ A LA L++G DGYFF+YD GR++MHPRQPELVG ++W Sbjct: 77 QSAIAPLVRSGRNDAATRQAAMEALARLDYGPDGYFFLYDLQGRNLMHPRQPELVGQDLW 136 Query: 121 NWRDASGSFTIQHLIERARQGGGYERYLWRKPSSKTVAPKLGYVISLPRWGWVIGTGIYL 180 RD G+ TIQ LI A+ GGG RY WRKPSS+ +APKLGYV+++P WGW++GTGIYL Sbjct: 137 ALRDPQGAPTIQQLIAAAKGGGGAVRYQWRKPSSQQLAPKLGYVVAVPEWGWMLGTGIYL 196 Query: 181 DDVEAALAQIDRQNSGYLHQTLLLIASIALASALAVGLAGLLLNLSEHRVADAKLRQLAQ 240 DDVE+ L Q+D + + +T+ I IA S L V +GL LN+SEHR ADAKLRQLAQ Sbjct: 197 DDVESTLRQLDARAETDIRETMAWIGVIAGISILLVAASGLALNVSEHREADAKLRQLAQ 256 Query: 241 RVVRSQEEERARLSRDLHDGISQWLVSIKLQIEAALVRLNGTPEQAATGRSGFEKTATQI 300 RVV+SQEEERARLSR+LHDGISQ LVS+KL +E A RL P + A ++ Sbjct: 257 RVVQSQEEERARLSRELHDGISQLLVSVKLVLETAANRLRLAPSEGAAVAPVLGMALNRL 316 Query: 301 NGVLAEVRRISHDLRPAILDDLGLAAALEHLCGEWRDAAGAGVEIVFENQAQADDGATLP 360 + V EVRR++ +LRPA+LDDLGL AAL+HL E + G+G+EIV Q+ LP Sbjct: 317 DTVFNEVRRVARNLRPALLDDLGLFAALQHLAREMQ--GGSGLEIVV---TQSGTPRELP 371 Query: 361 DVVNTVLFRIAQEALTNIARHAGASRIKVRLYQGHNLLMLQVQDNGHGFDLGQVDDHSRH 420 D T LFRIAQEALTN+ RHAGA R+ V L + L V+D+GHGFD+ ++ + Sbjct: 372 DEQATALFRIAQEALTNVERHAGARRVSVSLAFDADATRLAVRDDGHGFDVARMQADPQR 431 Query: 421 GIGLRNMRERIEAVGGELGIDSSPAGTSISAVIARASLPSLIPA 464 GIGLRN+RERI A+ G+ I S GT I ASLP +PA Sbjct: 432 GIGLRNLRERIAALCGQFDIASGLGGTQII-----ASLPLALPA 470 >ref|YP_001862546.1| integral membrane sensor signal transduction histidine kinase [Burkholderia phymatum STM815] gb|ACC75500.1| integral membrane sensor signal transduction histidine kinase [Burkholderia phymatum STM815] Length = 471 Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust. Identities = 245/466 (52%), Positives = 314/466 (67%), Gaps = 10/466 (2%) Query: 1 MKLRQKIIFLAIVPLCLAFTAIALVVRYQAVELASQQRAAVEAAYLASKNTELRHYVDLA 60 MKL+ KI LAIVP A IA VR+QA LAS Q ++AYLASK ELRHYVDLA Sbjct: 1 MKLKAKIFLLAIVPFMAAIAGIAFGVRHQATALASAQHDTTQSAYLASKEIELRHYVDLA 60 Query: 61 QHALAHLYD----TGRTDDAIKEEARHLLADLEFGDDGYFFVYDDTGRSIMHPRQPELVG 116 A+ LYD R D ++ A +L ++FG DGYFFVYD GRS+MHPR+P+LVG Sbjct: 61 TSAIKPLYDEAGENARDDAILRSRALAMLEKMDFGQDGYFFVYDMHGRSLMHPREPDLVG 120 Query: 117 SEMWNWRDASGSFTIQHLIERARQGGGYERYLWRKPSSKTVAPKLGYVISLPRWGWVIGT 176 ++W RD +GS TIQ LI A QGGGY RY+W +PS+ +APKLGYV+ LPRWGW++GT Sbjct: 121 RDLWTLRDPAGSLTIQQLIAAAAQGGGYVRYVWHRPSTGKLAPKLGYVVPLPRWGWMVGT 180 Query: 177 GIYLDDVEAALAQIDRQNSGYLHQTLLLIASIALASALAVGLAGLLLNLSEHRVADAKLR 236 GIYLDDV+ LA+ID++ S + T+L I +IALA + + L+LN+SE+R ADAKL+ Sbjct: 181 GIYLDDVDTTLARIDQRASSDIEHTMLWIGAIALAGLCVIAVCALVLNVSEYRSADAKLK 240 Query: 237 QLAQRVVRSQEEERARLSRDLHDGISQWLVSIKLQIEAALVRLNGTPEQAATGRSGFEKT 296 +LAQ+VV SQE ERARLSR+LHDGISQ LVS+KL +E+AL R + + + Sbjct: 241 RLAQQVVESQENERARLSRELHDGISQMLVSVKLLLESALARFELSEPRVQPAEAALSTG 300 Query: 297 ATQINGVLAEVRRISHDLRPAILDDLGLAAALEHLCGEWRDAAGAGVEIVFENQAQADDG 356 ++ L EVRRISH LRP++LDDLGLAAALE L E +A + I F + D Sbjct: 301 IGRLGDALREVRRISHALRPSMLDDLGLAAALEQLTREL--SAQGHLAIGFTHVTH-DHA 357 Query: 357 ATLPDVVNTVLFRIAQEALTNIARHAGASRIKVRLYQGHNLLMLQVQDNGHGFDLGQVDD 416 A LPD V T LFRIAQEALTNI RHA A+ V L + + L + D+G GFD+ +V Sbjct: 358 AHLPDTVKTALFRIAQEALTNIFRHAHATEAAVSLDVSASRVTLSISDDGRGFDVERVQA 417 Query: 417 HSRHGIGLRNMRERIEAVGGELGIDSSPAGTSISA---VIARASLP 459 +R G+GLRNMRER+EA+GG+L +DS P T ++A + AR +LP Sbjct: 418 DARAGVGLRNMRERLEALGGDLRLDSRPGHTIVTASVPIFARKALP 463