BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0037.0145.p         (205 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003775367.1| hypothetical protein Hsero_1955 [Herbaspiril...   416   e-114
ref|YP_004720024.1| hypothetical protein TPY_2104 [Sulfobacillus...    77   2e-12

>ref|YP_003775367.1| hypothetical protein Hsero_1955 [Herbaspirillum seropedicae SmR1]
 gb|ADJ63459.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
          Length = 365

 Score =  416 bits (1069), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 204/205 (99%), Positives = 205/205 (100%)

Query: 1   LQQADFAAFVASHPRGKHIRREIRSLEKAGYTVEIRRASALSLSEAQRLHQLWLQLFHKH 60
           LQQADFAAFVASHPRGKHIRREIRSLEKAGYTVEIRRASALSLSEAQRLHQLWLQLFHKH
Sbjct: 161 LQQADFAAFVASHPRGKHIRREIRSLEKAGYTVEIRRASALSLSEAQRLHQLWLQLFHKH 220

Query: 61  RSADQIEVSPAFFASMSRLPHALLLLLRREQQIDAFDLCFILGDELESTYCGVDLARTAR 120
           RSADQIEVSPAFFASMSRLPHALLLLLRREQQIDAFDLCFILGDELESTYCGVDLARTAR
Sbjct: 221 RSADQIEVSPAFFASMSRLPHALLLLLRREQQIDAFDLCFILGDELESTYCGVDLARTAR 280

Query: 121 LSVHRAMGYHIVRVAYEAGLRRINFGISNERQKQEMGCQFDGLYARITASPRWLGGPLRY 180
           LSVHRAMGYHIVRVAYEAGLRRINFGISNE+QKQEMGCQFDGLYARITASPRWLGGPLRY
Sbjct: 281 LSVHRAMGYHIVRVAYEAGLRRINFGISNEQQKQEMGCQFDGLYARITASPRWLGGPLRY 340

Query: 181 LLRRFVLTPTTADGASQQDSRKVAG 205
           LLRRFVLTPTTADGASQQDSRKVAG
Sbjct: 341 LLRRFVLTPTTADGASQQDSRKVAG 365


>ref|YP_004720024.1| hypothetical protein TPY_2104 [Sulfobacillus acidophilus TPY]
 gb|AEJ40281.1| hypothetical protein TPY_2104 [Sulfobacillus acidophilus TPY]
          Length = 358

 Score = 77.0 bits (188), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/171 (32%), Positives = 79/171 (46%), Gaps = 5/171 (2%)

Query: 22  EIRSLEKAGYTVEIRRASALSLSEAQRLHQLWLQLFHKHRSADQIEVSPAFFASMSRLPH 81
           ++R L +AGYT       ++  S A  L  LW  ++ +H+  DQ+ +  A+FA    L +
Sbjct: 181 DLRLLNEAGYTWTTLPTESVVRSAAH-LATLWRAVYDRHQDPDQLILPAAYFARFGSLSN 239

Query: 82  ALLLLLRREQQIDAFDLCFILGDELESTYCGVDLARTARLSVHRAMGYHIVRVAYEAGLR 141
             +L L     + AF   F     LE++YCGV+        V R++   IVR A +    
Sbjct: 240 CNVLALTHGTTLVAFAYLFSHERWLEASYCGVNYTYAVGKPVQRSLVMAIVRWALDHHYE 299

Query: 142 RINFGISNERQKQEMGCQFDGLYARITASPRWLGGPLRYLLRRFVLTPTTA 192
            +N GISNE  K   G QF  LYA +      L    R LL +F   P  A
Sbjct: 300 AVNLGISNELVKARTGAQFRPLYAYLKG----LTATARDLLDQFWGDPPNA 346