BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0140.p (362 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775362.1| HlyD family membrane-fusion protein [Herbasp... 314 2e-83 ref|YP_001816194.1| secretion protein HlyD family protein [Burkh... 138 1e-30 ref|ZP_02376163.1| secretion protein HlyD family protein [Burkho... 134 2e-29 ref|YP_001115471.1| secretion protein HlyD family protein [Burkh... 134 2e-29 ref|YP_002232933.1| transporter system transport protein [Burkho... 132 1e-28 ref|YP_001585834.1| secretion protein HlyD family protein [Burkh... 129 9e-28 gb|EGD04185.1| HlyD family secretion protein [Burkholderia sp. T... 127 2e-27 ref|YP_986597.1| secretion protein HlyD family protein [Acidovor... 127 3e-27 ref|YP_001100835.1| putative ABC transport system, membrane prot... 126 4e-27 ref|YP_003279226.1| secretion protein HlyD [Comamonas testostero... 126 5e-27 >ref|YP_003775362.1| HlyD family membrane-fusion protein [Herbaspirillum seropedicae SmR1] emb|CAM32553.1| HlyD family membrane-fusion protein [Herbaspirillum seropedicae] gb|ADJ63454.1| HlyD family membrane-fusion protein [Herbaspirillum seropedicae SmR1] Length = 358 Score = 314 bits (804), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 159/163 (97%), Positives = 160/163 (98%) Query: 1 MNRSLQHPLFAGLLLVVLAAVGWTGWAWWRDADAPAGLVSSNGRLEATEVDIGSRLGGRI 60 MNRSLQHPLFAGLLLVVLAAVGWTGWAWWRDADAPAGLVSSNGRLEATEVDIGSRLGGRI Sbjct: 1 MNRSLQHPLFAGLLLVVLAAVGWTGWAWWRDADAPAGLVSSNGRLEATEVDIGSRLGGRI 60 Query: 61 RHMLVDEGEAVQAGQVLAYLQVDSLHAQLREARAQQQRASQGVTVAQAQLAMRRSEQRSA 120 RHMLVDEGEAVQAGQVLAYLQVDSLHAQLREARAQQQRASQGVTVAQAQLAMRRSEQR A Sbjct: 61 RHMLVDEGEAVQAGQVLAYLQVDSLHAQLREARAQQQRASQGVTVAQAQLAMRRSEQRIA 120 Query: 121 QALTIQRHKSLSAATRRVERSQPLGRMQALNAQEVDDEENALA 163 QALT+QRHKSLSAATRRVERSQPLGRMQAL AQEVDDEEN LA Sbjct: 121 QALTVQRHKSLSAATRRVERSQPLGRMQALTAQEVDDEENTLA 163 >ref|YP_001816194.1| secretion protein HlyD family protein [Burkholderia ambifaria MC40-6] gb|ACB68641.1| secretion protein HlyD family protein [Burkholderia ambifaria MC40-6] Length = 357 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 76/157 (48%), Positives = 105/157 (66%), Gaps = 1/157 (0%) Query: 3 RSLQHPLFAGLLLVVLAA-VGWTGWAWWRDADAPAGLVSSNGRLEATEVDIGSRLGGRIR 61 +++ PL G+ VLA V + GWA WRD AGLVS NGR+EATE+D+ ++L GR+ Sbjct: 2 KTIPRPLLIGIGAAVLAIGVAYYGWARWRDGQTDAGLVSGNGRIEATEIDVATKLPGRVT 61 Query: 62 HMLVDEGEAVQAGQVLAYLQVDSLHAQLREARAQQQRASQGVTVAQAQLAMRRSEQRSAQ 121 MLVDEG+ V AGQ LA + V L AQL EA+A++Q+A +AQ+A RRS++ +A Sbjct: 62 AMLVDEGDFVTAGQPLARMDVVVLQAQLDEAQAREQQAVNNAASIEAQVAQRRSDKTAAA 121 Query: 122 ALTIQRHKSLSAATRRVERSQPLGRMQALNAQEVDDE 158 A+ +QR L AATRR+ RS+ L R A + QE+DD+ Sbjct: 122 AVVVQRESELDAATRRLARSETLSRDGASSMQELDDD 158 >ref|ZP_02376163.1| secretion protein HlyD family protein [Burkholderia ubonensis Bu] Length = 357 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 75/151 (49%), Positives = 100/151 (66%) Query: 23 WTGWAWWRDADAPAGLVSSNGRLEATEVDIGSRLGGRIRHMLVDEGEAVQAGQVLAYLQV 82 W GW WRD A AGLVS NGR+EATE+D+ ++L GR+ MLVDEG+ V+AGQ LA + V Sbjct: 23 WYGWTLWRDGRADAGLVSGNGRIEATEIDVATKLPGRVGAMLVDEGDFVKAGQPLASMDV 82 Query: 83 DSLHAQLREARAQQQRASQGVTVAQAQLAMRRSEQRSAQALTIQRHKSLSAATRRVERSQ 142 LHAQL EARA++Q+A AQ+A RRS++ +A+A +QR L AA RR+ RS+ Sbjct: 83 LVLHAQLDEARAKEQQALNTAASVDAQVAQRRSDKAAAEAAVVQRESELDAARRRLARSE 142 Query: 143 PLGRMQALNAQEVDDEENALARLGRSARAAR 173 L R A + QE+DD+ + + RAAR Sbjct: 143 TLSREGASSMQELDDDRARARSMEATVRAAR 173 >ref|YP_001115471.1| secretion protein HlyD family protein [Burkholderia vietnamiensis G4] gb|ABO59216.1| secretion protein HlyD family protein [Burkholderia vietnamiensis G4] Length = 357 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 75/157 (47%), Positives = 104/157 (66%), Gaps = 1/157 (0%) Query: 3 RSLQHPLFAGLLLVVLAA-VGWTGWAWWRDADAPAGLVSSNGRLEATEVDIGSRLGGRIR 61 +++ PL G VLA V + GW+ WRD AGLVS NGR+EATE+D+ ++L GR+ Sbjct: 2 KTIPRPLLIGAGAAVLAVCVAYYGWSRWRDGQTDAGLVSGNGRIEATEIDVATKLPGRVT 61 Query: 62 HMLVDEGEAVQAGQVLAYLQVDSLHAQLREARAQQQRASQGVTVAQAQLAMRRSEQRSAQ 121 MLVDEG+ V+AGQ LA + V L AQL EA+A+ Q+A AQ+A RRS++ +A+ Sbjct: 62 AMLVDEGDFVKAGQPLARMDVVVLQAQLDEAQARAQQAVNTAASVDAQVAQRRSDKAAAE 121 Query: 122 ALTIQRHKSLSAATRRVERSQPLGRMQALNAQEVDDE 158 A+ +QR L AATRR+ RS+ L R A + QE+DD+ Sbjct: 122 AVVVQRESELDAATRRLARSETLSRDGASSLQELDDD 158 >ref|YP_002232933.1| transporter system transport protein [Burkholderia cenocepacia J2315] emb|CAR54163.1| transporter system transport protein [Burkholderia cenocepacia J2315] Length = 357 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 74/157 (47%), Positives = 103/157 (65%), Gaps = 1/157 (0%) Query: 3 RSLQHPLFAGLLLVVLAA-VGWTGWAWWRDADAPAGLVSSNGRLEATEVDIGSRLGGRIR 61 ++++ P+ G VLA + + GW WRDA AGLVS NGR+EA E+D+ ++L GR+ Sbjct: 2 KTIKRPILIGAGAAVLAIGLIYYGWTRWRDARTDAGLVSGNGRIEAIEIDVATKLPGRVT 61 Query: 62 HMLVDEGEAVQAGQVLAYLQVDSLHAQLREARAQQQRASQGVTVAQAQLAMRRSEQRSAQ 121 MLVDEG+ V AGQ LA + V L AQL EA+A++Q+A AQ+A RRS++ +A Sbjct: 62 AMLVDEGDFVSAGQPLARMDVVVLRAQLDEAQAREQQAVNTAASIDAQVAQRRSDKAAAD 121 Query: 122 ALTIQRHKSLSAATRRVERSQPLGRMQALNAQEVDDE 158 AL +QR L AATRR+ RS+ L R A + QE+DD+ Sbjct: 122 ALVVQRESELDAATRRLARSETLSRDGASSLQELDDD 158 >ref|YP_001585834.1| secretion protein HlyD family protein [Burkholderia multivorans ATCC 17616] ref|YP_001941460.1| HlyD family secretion protein [Burkholderia multivorans ATCC 17616] gb|ABX19542.1| secretion protein HlyD family protein [Burkholderia multivorans ATCC 17616] dbj|BAG47470.1| HlyD family secretion protein [Burkholderia multivorans ATCC 17616] Length = 357 Score = 129 bits (323), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 75/157 (47%), Positives = 103/157 (65%), Gaps = 1/157 (0%) Query: 3 RSLQHPLFAGLLLVVLAA-VGWTGWAWWRDADAPAGLVSSNGRLEATEVDIGSRLGGRIR 61 +++ PL G+ VLA + + GW WRD AGLVS NGR+EATE+D+ ++L GR+ Sbjct: 2 KTIPRPLLIGVGAAVLAIGLAYYGWTRWRDGQTDAGLVSGNGRIEATEIDVATKLPGRVT 61 Query: 62 HMLVDEGEAVQAGQVLAYLQVDSLHAQLREARAQQQRASQGVTVAQAQLAMRRSEQRSAQ 121 MLVDEG+ V AGQ LA + V L AQL EARA++Q+A AQ+A RRS++ +A Sbjct: 62 AMLVDEGDFVTAGQPLARMDVVVLQAQLDEARAREQQAVNTAASIDAQVAQRRSDKAAAA 121 Query: 122 ALTIQRHKSLSAATRRVERSQPLGRMQALNAQEVDDE 158 A+ +QR L AATRR+ RS+ L R A + QE+DD+ Sbjct: 122 AVVVQRESELDAATRRLARSETLSRDGASSLQELDDD 158 >gb|EGD04185.1| HlyD family secretion protein [Burkholderia sp. TJI49] Length = 171 Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 74/157 (47%), Positives = 103/157 (65%), Gaps = 1/157 (0%) Query: 3 RSLQHPLFAGLLLVVLAA-VGWTGWAWWRDADAPAGLVSSNGRLEATEVDIGSRLGGRIR 61 +++ PL G+ +LA + + GW WRD AGLVS NGR+EATE+D+ ++L GR+ Sbjct: 2 KTIPRPLLTGVGAALLAIGLAYYGWTRWRDGQTDAGLVSGNGRIEATEIDVATKLPGRVT 61 Query: 62 HMLVDEGEAVQAGQVLAYLQVDSLHAQLREARAQQQRASQGVTVAQAQLAMRRSEQRSAQ 121 MLVDEG+ V AGQ LA + V L AQL EARA++Q+A AQ+A RRS++ +A Sbjct: 62 AMLVDEGDFVTAGQPLARMDVVVLQAQLDEARAREQQAVNTAASIDAQVAQRRSDKAAAA 121 Query: 122 ALTIQRHKSLSAATRRVERSQPLGRMQALNAQEVDDE 158 A+ +QR L AATRR+ RS+ L R A + QE+DD+ Sbjct: 122 AVVVQRESELDAATRRLARSETLSRDGASSLQELDDD 158 >ref|YP_986597.1| secretion protein HlyD family protein [Acidovorax sp. JS42] ref|YP_002552959.1| secretion protein hlyd family protein [Acidovorax ebreus TPSY] gb|ABM42521.1| secretion protein HlyD family protein [Acidovorax sp. JS42] gb|ACM32959.1| secretion protein HlyD family protein [Acidovorax ebreus TPSY] Length = 356 Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 72/136 (52%), Positives = 92/136 (67%), Gaps = 2/136 (1%) Query: 25 GWAW--WRDADAPAGLVSSNGRLEATEVDIGSRLGGRIRHMLVDEGEAVQAGQVLAYLQV 82 G+AW W++ AGLV NGR+EATEVD+ ++ GR+ +LV EG+ VQAGQ LA +QV Sbjct: 22 GYAWLQWKETQQNAGLVGGNGRIEATEVDVATKYAGRVAEILVQEGDFVQAGQTLARMQV 81 Query: 83 DSLHAQLREARAQQQRASQGVTVAQAQLAMRRSEQRSAQALTIQRHKSLSAATRRVERSQ 142 DSL AQ REA A + RA Q V A+AQ+A+R SE +AQAL QR L AA RR RS+ Sbjct: 82 DSLLAQQREAEASRDRALQAVASARAQVALRESEHTAAQALIAQREADLDAAQRRAARSE 141 Query: 143 PLGRMQALNAQEVDDE 158 L R A + QE+DD+ Sbjct: 142 TLAREGASSEQELDDD 157 >ref|YP_001100835.1| putative ABC transport system, membrane protein [Herminiimonas arsenicoxydans] emb|CAL62714.1| putative secretion protein HlyD [Herminiimonas arsenicoxydans] Length = 355 Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 71/145 (48%), Positives = 103/145 (71%), Gaps = 2/145 (1%) Query: 16 VVLAAVGWTGWAWW--RDADAPAGLVSSNGRLEATEVDIGSRLGGRIRHMLVDEGEAVQA 73 +VL AV +AW+ RD AG +S NGR+EATEVD+ ++LGGR+ +LV EG+ V A Sbjct: 12 IVLIAVVAAAYAWFTLRDTGPGAGFISGNGRIEATEVDVSTKLGGRVLDILVKEGDFVSA 71 Query: 74 GQVLAYLQVDSLHAQLREARAQQQRASQGVTVAQAQLAMRRSEQRSAQALTIQRHKSLSA 133 GQ LA++Q+D+L A + EARA+QQ+A + A+A +AMR+S++++AQAL +QR L A Sbjct: 72 GQPLAHMQIDTLTAMVDEARARQQQAVAAIASAEALVAMRQSDKQAAQALVVQRQSELDA 131 Query: 134 ATRRVERSQPLGRMQALNAQEVDDE 158 A RR+ RSQ L + A + QE+DD+ Sbjct: 132 AQRRLTRSQTLAQEGASSQQELDDD 156 >ref|YP_003279226.1| secretion protein HlyD [Comamonas testosteroni CNB-2] ref|ZP_07045672.1| secretion protein HlyD [Comamonas testosteroni S44] gb|ACY33930.1| secretion protein HlyD [Comamonas testosteroni CNB-2] gb|EFI60651.1| secretion protein HlyD [Comamonas testosteroni S44] Length = 364 Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 69/134 (51%), Positives = 92/134 (68%) Query: 25 GWAWWRDADAPAGLVSSNGRLEATEVDIGSRLGGRIRHMLVDEGEAVQAGQVLAYLQVDS 84 GW WR A A GLVS NGR+EATE+D+ ++ GRI +LV EGE V+AGQ LA +Q++S Sbjct: 28 GWQQWRSAQASEGLVSGNGRIEATEIDVATKYAGRIAEILVQEGEFVKAGQPLARMQIES 87 Query: 85 LHAQLREARAQQQRASQGVTVAQAQLAMRRSEQRSAQALTIQRHKSLSAATRRVERSQPL 144 L AQ REA A ++RAS VT A+A++A+R S+ + A QR L AA RRV+RS+ L Sbjct: 88 LQAQQREAIAGRERASHAVTSARAEIALRESQYAATMATVAQREAELDAALRRVKRSETL 147 Query: 145 GRMQALNAQEVDDE 158 R A + QE+DD+ Sbjct: 148 AREGASSEQELDDD 161