BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0108.p (326 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775330.1| LacI family transcription regulator protein ... 653 0.0 ref|YP_550225.1| LacI family transcription regulator [Polaromona... 297 1e-78 ref|YP_001020165.1| LacI family transcription regulator [Methyli... 291 1e-76 ref|YP_981368.1| regulatory protein, LacI [Polaromonas naphthale... 285 6e-75 ref|YP_004415838.1| LacI family transcription regulator [Pusilli... 284 1e-74 ref|YP_004751404.1| putative transcription regulator transcripti... 283 2e-74 ref|YP_001861512.1| LacI family transcription regulator [Burkhol... 283 2e-74 ref|YP_004236008.1| LacI family transcriptional regulator [Acido... 281 7e-74 ref|YP_003450551.1| transcriptional regulator [Azospirillum sp. ... 280 2e-73 ref|YP_003774580.1| LacI family transcription regulator protein ... 279 4e-73 >ref|YP_003775330.1| LacI family transcription regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ63422.1| LacI family transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 340 Score = 653 bits (1685), Expect = 0.0, Method: Compositional matrix adjust. Identities = 323/326 (99%), Positives = 324/326 (99%) Query: 1 VTKEDVARAAGVSHITVSRVINTPEKVSPATRERVEAFIASMGYIPNLLAGGLASRRTRI 60 VTKEDVARAAGVSHITVSRVIN+PEKVSPATRERVEAFIASMGYIPNLLAGGLASRRTRI Sbjct: 15 VTKEDVARAAGVSHITVSRVINSPEKVSPATRERVEAFIASMGYIPNLLAGGLASRRTRI 74 Query: 61 VAAIVPTISHSIFAETLRGLSEQLCMQGYQLLLGQTNYSEEAETGLVEAFIGRRVDGLVL 120 VAAIVPTISHSIFAETLRGLSEQLCMQGYQLLLGQTNYSEEAETGLVE FIGRRVDGLVL Sbjct: 75 VAAIVPTISHSIFAETLRGLSEQLCMQGYQLLLGQTNYSEEAETGLVEVFIGRRVDGLVL 134 Query: 121 TGVQHSPMTRQRLKAAGIPVVETWDLTDTPIDMLAGFDNHAAGRAMGDYLYQKGYRRMAF 180 TGVQHSPMTRQRLKAAGIPVVETWDLTDTPIDMLAGFDNHAAGRAMGDYLYQKGYRRMAF Sbjct: 135 TGVQHSPMTRQRLKAAGIPVVETWDLTDTPIDMLAGFDNHAAGRAMGDYLYQKGYRRMAF 194 Query: 181 VGGDDPRGMARVAGLRESLRHHGAAEPVHLVMPMGAFLQAGREAIGRLLTQHPEVDAAFF 240 VGGDDPRGMARVAGLRESLRHHGAAEPVHLVMPMGAFLQAGREAIGRLLTQHPEVDAAFF Sbjct: 195 VGGDDPRGMARVAGLRESLRHHGAAEPVHLVMPMGAFLQAGREAIGRLLTQHPEVDAAFF 254 Query: 241 SNDVIAAGAALECARRSIAVPGRIALAGFANLEIATEVLPALTTVQISAHQIGLTAAEML 300 SNDVIAAGAALECARR IAVPGRIALAGFANLEIATEVLPALTTVQISAHQIGLTAAEML Sbjct: 255 SNDVIAAGAALECARRGIAVPGRIALAGFANLEIATEVLPALTTVQISAHQIGLTAAEML 314 Query: 301 LTRFDGDPLDQAVHDLGYSILERDST 326 LTRFDGDPLDQAVHDLGYSILERDST Sbjct: 315 LTRFDGDPLDQAVHDLGYSILERDST 340 >ref|YP_550225.1| LacI family transcription regulator [Polaromonas sp. JS666] gb|ABE45327.1| transcriptional regulator, LacI family [Polaromonas sp. JS666] Length = 347 Score = 297 bits (761), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 155/326 (47%), Positives = 217/326 (66%) Query: 1 VTKEDVARAAGVSHITVSRVINTPEKVSPATRERVEAFIASMGYIPNLLAGGLASRRTRI 60 VT DVA+ AGV+ IT SR +NTP +VS ++V + GY+PN LAGGLAS R+R+ Sbjct: 22 VTLHDVAKLAGVAPITASRALNTPTQVSAEVLKKVTDAVQRTGYVPNRLAGGLASSRSRL 81 Query: 61 VAAIVPTISHSIFAETLRGLSEQLCMQGYQLLLGQTNYSEEAETGLVEAFIGRRVDGLVL 120 VAA+VPT++ +F ET++ L++ L QGYQL+LGQ+ Y + E L+EA IGRR DG+VL Sbjct: 82 VAAVVPTLNGPVFLETVQALTDALAEQGYQLMLGQSGYVDSREDALLEAIIGRRPDGIVL 141 Query: 121 TGVQHSPMTRQRLKAAGIPVVETWDLTDTPIDMLAGFDNHAAGRAMGDYLYQKGYRRMAF 180 TG+ HSP R+RL AAGIPVVETWDLT TP+DML GF + GRA+ D+LY +G RR+A Sbjct: 142 TGIMHSPEGRKRLLAAGIPVVETWDLTPTPLDMLVGFSHVDVGRAVVDFLYARGRRRLAI 201 Query: 181 VGGDDPRGMARVAGLRESLRHHGAAEPVHLVMPMGAFLQAGREAIGRLLTQHPEVDAAFF 240 V GDD R R + + R G E + +P ++GR A+ L+ ++DA F Sbjct: 202 VAGDDERSTRRHQAFQAAARAAGLPEVRMVTVPAPTTAKSGRSALAELMRDAGDIDAVFC 261 Query: 241 SNDVIAAGAALECARRSIAVPGRIALAGFANLEIATEVLPALTTVQISAHQIGLTAAEML 300 S+D++A G ++ IAVPG++A+ GF +LE A ++ PALTTV+I IG AA + Sbjct: 262 SSDLLALGVLMQAQASGIAVPGQLAIVGFGDLEFAADLNPALTTVRIDGTAIGRQAARFI 321 Query: 301 LTRFDGDPLDQAVHDLGYSILERDST 326 + R +G P++ V D+G++I+ER ST Sbjct: 322 VERAEGRPVEPRVVDIGFTIVERGST 347 >ref|YP_001020165.1| LacI family transcription regulator [Methylibium petroleiphilum PM1] gb|ABM93930.1| transcriptional regulator, LacI family [Methylibium petroleiphilum PM1] Length = 347 Score = 291 bits (744), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 161/330 (48%), Positives = 217/330 (65%), Gaps = 4/330 (1%) Query: 1 VTKEDVARAAGVSHITVSRVINTPEKVSPATRERVEAFIASMGYIPNLLAGGLASRRTRI 60 +T DVAR AGVS IT SR +NTP++V+P RV +A GY+PN LAGGLAS R+R+ Sbjct: 18 ITLGDVARLAGVSPITASRALNTPDQVAPDKLARVREAVARTGYVPNRLAGGLASARSRL 77 Query: 61 VAAIVPTISHSIFAETLRGLSEQLCMQGYQLLLGQTNYSEEAETGLVEAFIGRRVDGLVL 120 VAA+VPTI+ +F E ++ L+ L GYQL+LGQ+ Y+E E L+EA IGRR DG+VL Sbjct: 78 VAAVVPTIAGPVFMEMVQSLTSALADAGYQLMLGQSGYTESREDALLEAIIGRRPDGIVL 137 Query: 121 TGVQHSPMTRQRLKAAGIPVVETWDLTDTPIDMLAGFDNHAAGRAMGDYLYQKGYRRMAF 180 TG+ HSP R+RL A+GIPVVETWDLT TPIDML GF + A A+ +L+ KG RR A Sbjct: 138 TGILHSPEGRRRLLASGIPVVETWDLTPTPIDMLVGFSHAEAAAAVARHLHAKGRRRPAL 197 Query: 181 VGGDDPRGMARVAG-LRESLRH---HGAAEPVHLVMPMGAFLQAGREAIGRLLTQHPEVD 236 + DD R + R G + E+LR AAE L +P L +GR + RLL + PEVD Sbjct: 198 LSADDERALRRNRGFVDEALRLGLVRDAAEIPALRVPAPTTLGSGRSGLARLLAERPEVD 257 Query: 237 AAFFSNDVIAAGAALECARRSIAVPGRIALAGFANLEIATEVLPALTTVQISAHQIGLTA 296 A F S+D++A G +E A R IAVP ++A+ GF +L A + PAL+TV+I IG A Sbjct: 258 AVFCSSDMLALGVLVEAAARGIAVPQQLAVVGFGDLGFAADTQPALSTVRIDGTGIGQRA 317 Query: 297 AEMLLTRFDGDPLDQAVHDLGYSILERDST 326 A ++ R DG + + + D+G+ ++ER S+ Sbjct: 318 ARFIVDRADGRTVGEKIVDVGFRVIERGSS 347 >ref|YP_981368.1| regulatory protein, LacI [Polaromonas naphthalenivorans CJ2] gb|ABM36447.1| transcriptional regulator, LacI family [Polaromonas naphthalenivorans CJ2] Length = 332 Score = 285 bits (730), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 149/325 (45%), Positives = 210/325 (64%), Gaps = 2/325 (0%) Query: 2 TKEDVARAAGVSHITVSRVINTPEKVSPATRERVEAFIASMGYIPNLLAGGLASRRTRIV 61 T D+AR AGVS +TVSR +N PEKVSPA RV +A G++PN +A GL S + R+V Sbjct: 8 TVHDIARLAGVSAMTVSRTLNHPEKVSPAVLARVREVVARTGFVPNGMARGLRSSKARLV 67 Query: 62 AAIVPTISHSIFAETLRGLSEQLCMQGYQLLLGQTNYSEEAETGLVEAFIGRRVDGLVLT 121 AA++PT+ +F ET+R L+E L QGYQL++GQ+ Y E L++A I RR DG+VLT Sbjct: 68 AAVLPTLVGPVFQETVRALNEALDEQGYQLMIGQSGYDASREDALLDAIIRRRPDGIVLT 127 Query: 122 GVQHSPMTRQRLKAAGIPVVETWDLTDTPIDMLAGFDNHAAGRAMGDYLYQKGYRRMAFV 181 G+ HSP R++L A+GIPVVETWDLT TPIDML GF + G+++ +LY +GYR A + Sbjct: 128 GIMHSPEGRRQLLASGIPVVETWDLTPTPIDMLVGFSHERIGQSVCHFLYSRGYRHPALI 187 Query: 182 GGDDPRGMARVAGLRESLRHHGA-AEPVHLVMPMGAFLQAGREAIGRLLTQHPEVDAAFF 240 DD R R+ G + R G A P HLV P L +GR + +L HP DA F Sbjct: 188 SADDDRARRRIEGFQGMSRTLGLDAAPTHLV-PAPTTLGSGRAGLAAVLAAHPHTDAVFC 246 Query: 241 SNDVIAAGAALECARRSIAVPGRIALAGFANLEIATEVLPALTTVQISAHQIGLTAAEML 300 S+D++A G +E R +AVP ++ + G +L++A + PALTTV+I +IG TAA+ + Sbjct: 247 SSDMLALGVLIEAQARGLAVPRQLGVVGLGDLDLAASLQPALTTVRIDGTRIGRTAAQYI 306 Query: 301 LTRFDGDPLDQAVHDLGYSILERDS 325 + R +G + + + D+G+ I+ER S Sbjct: 307 VERAEGRSVSEPIVDIGFEIIERAS 331 >ref|YP_004415838.1| LacI family transcription regulator [Pusillimonas sp. T7-7] gb|AEC19214.1| LacI family transcription regulator [Pusillimonas sp. T7-7] Length = 343 Score = 284 bits (727), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 146/326 (44%), Positives = 209/326 (64%) Query: 1 VTKEDVARAAGVSHITVSRVINTPEKVSPATRERVEAFIASMGYIPNLLAGGLASRRTRI 60 +T +VAR AGVS IT SRV+NTP++V+ TR++V + GY+PN +AGGLAS R+R+ Sbjct: 17 ITLREVARLAGVSPITASRVMNTPDQVAQETRQKVLDTVQRTGYVPNRMAGGLASSRSRL 76 Query: 61 VAAIVPTISHSIFAETLRGLSEQLCMQGYQLLLGQTNYSEEAETGLVEAFIGRRVDGLVL 120 +AA+VP+ S+F ET+ L+ L GYQL+LGQT+YS E L+EA IGRR DG+ L Sbjct: 77 IAAVVPSTVMSVFMETIESLNSTLFDAGYQLMLGQTDYSSHREELLLEAIIGRRPDGIFL 136 Query: 121 TGVQHSPMTRQRLKAAGIPVVETWDLTDTPIDMLAGFDNHAAGRAMGDYLYQKGYRRMAF 180 TG+ R RL A+GIP+VETWDLT PIDML GF + G + + +KG RR+ Sbjct: 137 TGIMPPGKDRTRLLASGIPIVETWDLTPKPIDMLVGFSHLEIGHEVAHFFIRKGRRRLGI 196 Query: 181 VGGDDPRGMARVAGLRESLRHHGAAEPVHLVMPMGAFLQAGREAIGRLLTQHPEVDAAFF 240 V +D R R E G A+ + + +++GREA+G++L + P+VDA F Sbjct: 197 VQANDERANRRSRAFTEVAAQSGLADVTIVDVGASRSIKSGREALGKMLAETPDVDAIFC 256 Query: 241 SNDVIAAGAALECARRSIAVPGRIALAGFANLEIATEVLPALTTVQISAHQIGLTAAEML 300 S+D++A G E R IA+P RIA+ GF ++ I +++PAL+TV I+ IG AA L Sbjct: 257 SSDLLALGVMTEARTRQIAIPERIAIMGFGDVAIVADMVPALSTVHINGGNIGKLAARCL 316 Query: 301 LTRFDGDPLDQAVHDLGYSILERDST 326 + R D +DQ + D+G+SI+ER++T Sbjct: 317 IDRADDQAVDQRIIDVGFSIIERETT 342 >ref|YP_004751404.1| putative transcription regulator transcription regulator protein [Collimonas fungivorans Ter331] gb|AEK60581.1| putative transcription regulator transcription regulator protein [Collimonas fungivorans Ter331] Length = 361 Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 145/329 (44%), Positives = 209/329 (63%), Gaps = 5/329 (1%) Query: 2 TKEDVARAAGVSHITVSRVINTPEKVSPATRERVEAFIASMGYIPNLLAGGLASRRTRIV 61 T DVA+ AGV+ IT SR +NTP+ VS ++V+A + GY+PNLLAG LAS+++R+V Sbjct: 32 TLRDVAKLAGVAPITASRALNTPDAVSAKVLQKVQAAVLQTGYVPNLLAGALASQKSRLV 91 Query: 62 AAIVPTISHSIFAETLRGLSEQLCMQGYQLLLGQTNYSEEAETGLVEAFIGRRVDGLVLT 121 AA+VPT+S +F +T+ L++ L GYQ++LGQ+ Y E L++A IGRR DG+VLT Sbjct: 92 AAVVPTLSGPMFLQTVEALTDTLAGAGYQVMLGQSGYENSREDALLDAIIGRRPDGIVLT 151 Query: 122 GVQHSPMTRQRLKAAGIPVVETWDLTDTPIDMLAGFDNHAAGRAMGDYLYQKGYRRMAFV 181 G+ SP R+RL A+GIPVVETWDLT TP+DML GF + G A+ YL+ KG RR+A + Sbjct: 152 GITRSPQARRRLLASGIPVVETWDLTPTPVDMLVGFSHEKIGAAVAQYLHSKGKRRVAAI 211 Query: 182 GGDDPRGMARVAGLRESLRHHGAAEPVHLVMPMG-----AFLQAGREAIGRLLTQHPEVD 236 GDD R R E+ G A P +P L GR + LL + P++D Sbjct: 212 SGDDERSRRRATAFSEAAVRLGMARPQESEVPACLVTAPTTLGNGRSGLRELLQRAPDID 271 Query: 237 AAFFSNDVIAAGAALECARRSIAVPGRIALAGFANLEIATEVLPALTTVQISAHQIGLTA 296 A F S+D++A G +E +IA+PG++A+ G +L + ++ P LTTV+I IG TA Sbjct: 272 AVFCSSDLLALGVMIEAQASAIAIPGQLAVIGLGDLSFSRDLHPPLTTVRIDGTAIGSTA 331 Query: 297 AEMLLTRFDGDPLDQAVHDLGYSILERDS 325 A ++ R +G + + + DLG++I+ER S Sbjct: 332 ARFIIDRSEGKSVAEPICDLGFTIIERAS 360 >ref|YP_001861512.1| LacI family transcription regulator [Burkholderia phymatum STM815] gb|ACC74466.1| transcriptional regulator, LacI family [Burkholderia phymatum STM815] Length = 355 Score = 283 bits (724), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 146/321 (45%), Positives = 209/321 (65%), Gaps = 1/321 (0%) Query: 5 DVARAAGVSHITVSRVINTPEKVSPATRERVEAFIASMGYIPNLLAGGLASRRTRIVAAI 64 DVA AGVS ITVSRV N+P V+P T ERV + +GY+PN LAGGL+S R+R++AAI Sbjct: 35 DVAAQAGVSPITVSRVFNSPASVAPETLERVRQVVQKLGYVPNRLAGGLSSARSRLIAAI 94 Query: 65 VPTISHSIFAETLRGLSEQLCMQGYQLLLGQTNYSEEAETGLVEAFIGRRVDGLVLTGVQ 124 VPTI+HS+F+ET++ SE + GY++LL + YS+ E L++ + RR +G++LTGV Sbjct: 95 VPTIAHSLFSETIQVFSETMSRAGYEVLLALSGYSDSNEENLLDTVLSRRPEGVLLTGVA 154 Query: 125 HSPMTRQRLKAAGIPVVETWDLTDTPIDMLAGFDNHAAGRAMGDYLYQKGYRRMAFVGGD 184 H+ R+RL+ GIPVVETWD+T TPIDML GF + G A+ + +G +R A + Sbjct: 155 HTDSLRERLRNVGIPVVETWDMTQTPIDMLVGFSHEQIGAAVAERFLARGAKRPALISAS 214 Query: 185 DPRGMARVAGLRESLRHHGAAEPVHLVMPMGAFLQAGREAIGRLLTQHPEVDAAFFSNDV 244 D R +AR AG RE L G + +++ + L G+ A+ RLL PEVDA F +D+ Sbjct: 215 DVRALARRAGFRERLAKAGMRDVAEVIVAPPSSLATGKAALPRLLDSAPEVDAVFCGSDL 274 Query: 245 IAAGAALECARRSIAVPGRIALAGFANLEIATEVLPALTTVQISAHQIGLTAAEMLLTRF 304 +A GA R I VP R+A+ GF +L+ ATE P LTTV++ +IG++AA LL R Sbjct: 275 LAIGALGAARRMGIDVPARLAICGFGDLDFATETTPQLTTVRVDGTRIGVSAARALLDRL 334 Query: 305 DGDPLDQAVHDLGYSILERDS 325 +G ++A D+G+S++ R+S Sbjct: 335 NGI-HERAFVDVGFSVVGRES 354 >ref|YP_004236008.1| LacI family transcriptional regulator [Acidovorax avenae subsp. avenae ATCC 19860] gb|ADX47441.1| transcriptional regulator, LacI family [Acidovorax avenae subsp. avenae ATCC 19860] Length = 351 Score = 281 bits (720), Expect = 7e-74, Method: Compositional matrix adjust. Identities = 150/325 (46%), Positives = 208/325 (64%) Query: 1 VTKEDVARAAGVSHITVSRVINTPEKVSPATRERVEAFIASMGYIPNLLAGGLASRRTRI 60 VT +VA AGVS ITVSRV+ TP +VS ATR RVE ++++GY+PNLLAGGL S R+ + Sbjct: 26 VTLREVADRAGVSMITVSRVLKTPRQVSEATRARVEEAVSALGYVPNLLAGGLRSARSHL 85 Query: 61 VAAIVPTISHSIFAETLRGLSEQLCMQGYQLLLGQTNYSEEAETGLVEAFIGRRVDGLVL 120 V A+VPTI +F E ++ L++ L +G+Q++ G+ Y+ E L+ A +GRR DG+VL Sbjct: 86 VMALVPTIRGQLFGEMIQSLTDALHARGFQVVFGEVGYAASREDELLRAIVGRRPDGIVL 145 Query: 121 TGVQHSPMTRQRLKAAGIPVVETWDLTDTPIDMLAGFDNHAAGRAMGDYLYQKGYRRMAF 180 TGV HSP R+ L A+GIPVVETWD T TPIDML G + G A+ YL+ +G RR+A Sbjct: 146 TGVMHSPEGRRLLLASGIPVVETWDTTPTPIDMLVGLSHERLGEAVCRYLHGRGRRRLAL 205 Query: 181 VGGDDPRGMARVAGLRESLRHHGAAEPVHLVMPMGAFLQAGREAIGRLLTQHPEVDAAFF 240 V GDD R R G E+ R G EPV +P GR+A+ L + P++DA F Sbjct: 206 VSGDDERAARRQRGFSEAARQLGLQEPVLRWVPAPTSHAQGRDALAALREEVPDIDAVFC 265 Query: 241 SNDVIAAGAALECARRSIAVPGRIALAGFANLEIATEVLPALTTVQISAHQIGLTAAEML 300 S+D++A G E R IAVP +A+ GF ++E A + P+LTTV+I +IG AA + Sbjct: 266 SSDMLALGVLTEARERGIAVPRDLAVVGFGDIEFAATLAPSLTTVRIDGTRIGRIAASFI 325 Query: 301 LTRFDGDPLDQAVHDLGYSILERDS 325 R +G + + D+G+SI+ER+S Sbjct: 326 ADRAEGSAVPEPRVDIGFSIVERES 350 >ref|YP_003450551.1| transcriptional regulator [Azospirillum sp. B510] dbj|BAI74007.1| transcriptional regulator [Azospirillum sp. B510] Length = 361 Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 148/325 (45%), Positives = 205/325 (63%) Query: 2 TKEDVARAAGVSHITVSRVINTPEKVSPATRERVEAFIASMGYIPNLLAGGLASRRTRIV 61 T E VA AGVS +TVSRVIN PE V+ +E V+ I GY+PNLLAGGLAS RT++V Sbjct: 37 TLETVATLAGVSRMTVSRVINHPETVTSELKEVVQKAIVETGYVPNLLAGGLASSRTKVV 96 Query: 62 AAIVPTISHSIFAETLRGLSEQLCMQGYQLLLGQTNYSEEAETGLVEAFIGRRVDGLVLT 121 AA+VPT++H +F+ ++ +++L + GYQ+LLG + Y E E GL++A + RR D L LT Sbjct: 97 AAVVPTLTHVLFSGAIQAFTDRLALDGYQMLLGLSGYPTEREGGLLQAILSRRPDALYLT 156 Query: 122 GVQHSPMTRQRLKAAGIPVVETWDLTDTPIDMLAGFDNHAAGRAMGDYLYQKGYRRMAFV 181 G H TR++L+AA IP+VETWDL+ +DM GF + A G+ + +YLY KGYR+ A + Sbjct: 157 GTSHLAQTRRQLRAAKIPIVETWDLSHKAVDMAVGFSHKAVGQGVANYLYGKGYRQFATI 216 Query: 182 GGDDPRGMARVAGLRESLRHHGAAEPVHLVMPMGAFLQAGREAIGRLLTQHPEVDAAFFS 241 G DD R R +L HG ++ + P + + GREA+G LL A S Sbjct: 217 GADDERATLRSREFIATLAGHGISDVACISTPAPSTMAMGREALGELLANGFRRGAIQCS 276 Query: 242 NDVIAAGAALECARRSIAVPGRIALAGFANLEIATEVLPALTTVQISAHQIGLTAAEMLL 301 +D +A G LE R +AVPG IA+ GF +L+ A + P L+TV+I IG AAE LL Sbjct: 277 SDAMAHGVVLEAQARGLAVPGDIAVVGFGDLDFAAYMSPPLSTVRIDRFAIGRLAAEALL 336 Query: 302 TRFDGDPLDQAVHDLGYSILERDST 326 TR G P+ + V D+G+ I+ER +T Sbjct: 337 TRLAGHPVARKVVDVGFGIVERATT 361 >ref|YP_003774580.1| LacI family transcription regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ62672.1| LacI family transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 365 Score = 279 bits (714), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 150/330 (45%), Positives = 207/330 (62%), Gaps = 6/330 (1%) Query: 1 VTKEDVARAAGVSHITVSRVINTPEKVSPATRERVEAFIASMGYIPNLLAGGLASRRTRI 60 VT DVA+ AGV+ IT SR +NTP VSP ++V + GY+PNLLAGGLAS ++R+ Sbjct: 36 VTLRDVAQLAGVAPITASRALNTPSAVSPKVLQKVREAVEKTGYVPNLLAGGLASNKSRL 95 Query: 61 VAAIVPTISHSIFAETLRGLSEQLCMQGYQLLLGQTNYSEEAETGLVEAFIGRRVDGLVL 120 VA +VPT+ +F E + L+E L GYQ++LGQ+ Y E L+EA IGRR DG+VL Sbjct: 96 VAVVVPTVIGPVFQEIVHTLTETLAAAGYQVMLGQSGYENSREDALLEAIIGRRPDGVVL 155 Query: 121 TGVQHSPMTRQRLKAAGIPVVETWDLTDTPIDMLAGFDNHAAGRAMGDYLYQKGYRRMAF 180 TG+ S R+RL A+GIPVVETWDLT TPIDML GF + A GR + YL+Q+G +++A Sbjct: 156 TGIMRSAEARKRLLASGIPVVETWDLTPTPIDMLVGFSHEAIGREVARYLHQRGRKKVAV 215 Query: 181 VGGDDPRGMARVAGLRESL----RHHGAAE-PVHLVMPMGAFLQAGREAIGRLLTQHPEV 235 VGG D R R+ + H G A P+H V Q GR+ + LL P++ Sbjct: 216 VGGRDERSQRRMNAFAQECVALGMHEGRAPLPMHHVTAPTTLGQ-GRQGLAELLQAQPDL 274 Query: 236 DAAFFSNDVIAAGAALECARRSIAVPGRIALAGFANLEIATEVLPALTTVQISAHQIGLT 295 DA F S+D++A G +E R IA+P ++A+ GF +LE + ++ P LTTV+I IG Sbjct: 275 DAIFCSSDLLALGVMIEAQSRGIAIPEQLAVVGFGDLEFSRDLQPRLTTVRIDGTGIGQR 334 Query: 296 AAEMLLTRFDGDPLDQAVHDLGYSILERDS 325 AA ++ R G + + V D+G+SI+ RDS Sbjct: 335 AARFIIDRAAGIEVAERVVDVGFSIIARDS 364