BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0106.p (626 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775328.1| hypothetical protein Hsero_1911 [Herbaspiril... 1248 0.0 ref|YP_001352848.1| hypothetical protein mma_1158 [Janthinobacte... 814 0.0 ref|YP_001099332.1| hypothetical protein HEAR1023 [Herminiimonas... 814 0.0 ref|YP_004694380.1| diguanylate cyclase/phosphodiesterase with C... 707 0.0 ref|YP_004039747.1| diguanylate cyclase/phosphodiesterase [Methy... 692 0.0 ref|YP_003051048.1| diguanylate cyclase/phosphodiesterase [Methy... 692 0.0 ref|YP_003525074.1| diguanylate cyclase/phosphodiesterase [Sider... 682 0.0 ref|YP_003049090.1| diguanylate cyclase/phosphodiesterase [Methy... 680 0.0 ref|YP_003848538.1| diguanylate cyclase/phosphodiesterase [Galli... 665 0.0 gb|EGW61338.1| diguanylate cyclase/phosphodiesterase [Dechloroso... 648 0.0 >ref|YP_003775328.1| hypothetical protein Hsero_1911 [Herbaspirillum seropedicae SmR1] gb|ADJ63420.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 600 Score = 1248 bits (3228), Expect = 0.0, Method: Compositional matrix adjust. Identities = 600/600 (100%), Positives = 600/600 (100%) Query: 27 MSGTEDPMLSLLHEIIAQRKLTALFQPIVRMRNGEILGYEGLIRGPSNTPLHSPLALFKV 86 MSGTEDPMLSLLHEIIAQRKLTALFQPIVRMRNGEILGYEGLIRGPSNTPLHSPLALFKV Sbjct: 1 MSGTEDPMLSLLHEIIAQRKLTALFQPIVRMRNGEILGYEGLIRGPSNTPLHSPLALFKV 60 Query: 87 ARAHNMSVQMEYLCRHIVLTRFAQLGLPGNLFLNVSPGALMQPEAIQGETLRYLDTLGVN 146 ARAHNMSVQMEYLCRHIVLTRFAQLGLPGNLFLNVSPGALMQPEAIQGETLRYLDTLGVN Sbjct: 61 ARAHNMSVQMEYLCRHIVLTRFAQLGLPGNLFLNVSPGALMQPEAIQGETLRYLDTLGVN 120 Query: 147 PQRIIIELTENEPTYDYAQLRNAAMHYRDMGFQIAIDDLGEGFSSLRLWSELQPEYVKVD 206 PQRIIIELTENEPTYDYAQLRNAAMHYRDMGFQIAIDDLGEGFSSLRLWSELQPEYVKVD Sbjct: 121 PQRIIIELTENEPTYDYAQLRNAAMHYRDMGFQIAIDDLGEGFSSLRLWSELQPEYVKVD 180 Query: 207 MHFVQGINHDPMKLQFVRSIQEIAEKSGSIVIAEGIESQAELLTIRDLGIACGQGYHISR 266 MHFVQGINHDPMKLQFVRSIQEIAEKSGSIVIAEGIESQAELLTIRDLGIACGQGYHISR Sbjct: 181 MHFVQGINHDPMKLQFVRSIQEIAEKSGSIVIAEGIESQAELLTIRDLGIACGQGYHISR 240 Query: 267 PLPEPPVSISDDVTKTLRRDKVPLDAKKYGPGKHSTTVFKLLRETRYVSPEVSNDTVYDM 326 PLPEPPVSISDDVTKTLRRDKVPLDAKKYGPGKHSTTVFKLLRETRYVSPEVSNDTVYDM Sbjct: 241 PLPEPPVSISDDVTKTLRRDKVPLDAKKYGPGKHSTTVFKLLRETRYVSPEVSNDTVYDM 300 Query: 327 FVNDPQLQALPVVSNGLPIGLINRYSMVERFARLYGRELYGKKSCAFFMDPNPILTEQST 386 FVNDPQLQALPVVSNGLPIGLINRYSMVERFARLYGRELYGKKSCAFFMDPNPILTEQST Sbjct: 301 FVNDPQLQALPVVSNGLPIGLINRYSMVERFARLYGRELYGKKSCAFFMDPNPILTEQST 360 Query: 387 SLQDLSNLLVHAESHHLSNGFIITDRGQYMGLGTGHDLLREITQMQIDAARHANPLTQLP 446 SLQDLSNLLVHAESHHLSNGFIITDRGQYMGLGTGHDLLREITQMQIDAARHANPLTQLP Sbjct: 361 SLQDLSNLLVHAESHHLSNGFIITDRGQYMGLGTGHDLLREITQMQIDAARHANPLTQLP 420 Query: 447 GNVPINDHIEYLLQSGVEFCICYCDLDQFKPFNDVYGYRKGDDMIQATGRVLQQACDPEL 506 GNVPINDHIEYLLQSGVEFCICYCDLDQFKPFNDVYGYRKGDDMIQATGRVLQQACDPEL Sbjct: 421 GNVPINDHIEYLLQSGVEFCICYCDLDQFKPFNDVYGYRKGDDMIQATGRVLQQACDPEL 480 Query: 507 DFIGHIGGDDFLILFQSEDWEKRCRSMLDNFDAETRGFYYDEDVERGGYYTEDRQGNRVF 566 DFIGHIGGDDFLILFQSEDWEKRCRSMLDNFDAETRGFYYDEDVERGGYYTEDRQGNRVF Sbjct: 481 DFIGHIGGDDFLILFQSEDWEKRCRSMLDNFDAETRGFYYDEDVERGGYYTEDRQGNRVF 540 Query: 567 HKLVSVSLGAVKIEPSQYSSPHQIASAATRAKKQAKKIPGNSLFIERRIPATFSWALKDA 626 HKLVSVSLGAVKIEPSQYSSPHQIASAATRAKKQAKKIPGNSLFIERRIPATFSWALKDA Sbjct: 541 HKLVSVSLGAVKIEPSQYSSPHQIASAATRAKKQAKKIPGNSLFIERRIPATFSWALKDA 600 >ref|YP_001352848.1| hypothetical protein mma_1158 [Janthinobacterium sp. Marseille] gb|ABR91014.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 658 Score = 814 bits (2103), Expect = 0.0, Method: Compositional matrix adjust. Identities = 377/586 (64%), Positives = 472/586 (80%) Query: 30 TEDPMLSLLHEIIAQRKLTALFQPIVRMRNGEILGYEGLIRGPSNTPLHSPLALFKVARA 89 ED ++ L E+I R+LT LFQPI+RM++GEI+GYEGLIRGPS++PLHSPL LFKVAR+ Sbjct: 55 AEDHLVQRLKEVIEHRQLTPLFQPIIRMQSGEIIGYEGLIRGPSDSPLHSPLNLFKVARS 114 Query: 90 HNMSVQMEYLCRHIVLTRFAQLGLPGNLFLNVSPGALMQPEAIQGETLRYLDTLGVNPQR 149 N+SV++E+LCR I L +FA+L LPG LFLNVSP L+QP+ GETL Y+ +G+NP+R Sbjct: 115 CNLSVEVEHLCRRITLEKFAELRLPGKLFLNVSPECLIQPDVKHGETLGYIHEVGINPER 174 Query: 150 IIIELTENEPTYDYAQLRNAAMHYRDMGFQIAIDDLGEGFSSLRLWSELQPEYVKVDMHF 209 +IIELTE++PTYDY LR A HYR MGF+IAIDDLGEGFSSLRLWSEL+PEYVK+DMHF Sbjct: 175 VIIELTESQPTYDYDLLREAVTHYRAMGFRIAIDDLGEGFSSLRLWSELRPEYVKIDMHF 234 Query: 210 VQGINHDPMKLQFVRSIQEIAEKSGSIVIAEGIESQAELLTIRDLGIACGQGYHISRPLP 269 VQGIN DP+KLQFVRSIQEIAEKSG+IVIAEGIE+ AELL IRDLG+A GQGY I+RP Sbjct: 235 VQGINLDPIKLQFVRSIQEIAEKSGTIVIAEGIETDAELLMIRDLGVAYGQGYKIARPHA 294 Query: 270 EPPVSISDDVTKTLRRDKVPLDAKKYGPGKHSTTVFKLLRETRYVSPEVSNDTVYDMFVN 329 P ++S D+ LR + V + + G G T KLLR + V+PEV N+ +Y+MF N Sbjct: 295 NPATTLSTDLCNLLRHNGVAVYPHENGRGHKMLTAMKLLRSVKAVAPEVHNNRIYEMFNN 354 Query: 330 DPQLQALPVVSNGLPIGLINRYSMVERFARLYGRELYGKKSCAFFMDPNPILTEQSTSLQ 389 DP L+ +PVVSNG+P+GLI R ++++RFAR Y REL+GKKSC FMD NP++T+++T+L Sbjct: 355 DPTLEVIPVVSNGIPVGLITRANLIDRFARPYLRELHGKKSCTLFMDSNPLITDKNTALH 414 Query: 390 DLSNLLVHAESHHLSNGFIITDRGQYMGLGTGHDLLREITQMQIDAARHANPLTQLPGNV 449 LS ++V A+ HHL NGFIITD GQYMG+G HDL+REITQMQI+AAR+ANPLT LPGNV Sbjct: 415 ALSQIIVDADRHHLFNGFIITDNGQYMGMGNAHDLMREITQMQINAARYANPLTLLPGNV 474 Query: 450 PINDHIEYLLQSGVEFCICYCDLDQFKPFNDVYGYRKGDDMIQATGRVLQQACDPELDFI 509 PI++HI+ LL++G FC CY DLD FKP+NDVYGYRKGDDM++ TG++L CDP+ DF+ Sbjct: 475 PIDEHIDRLLENGTRFCACYVDLDHFKPYNDVYGYRKGDDMLRLTGKILSGHCDPQKDFV 534 Query: 510 GHIGGDDFLILFQSEDWEKRCRSMLDNFDAETRGFYYDEDVERGGYYTEDRQGNRVFHKL 569 GHIGGDDF+ILFQSEDWE+RCR+++D F A FY ED ++GGY +EDR+G +VFH L Sbjct: 535 GHIGGDDFIILFQSEDWEQRCRAIIDAFVAAVPDFYCVEDRKKGGYISEDRRGKQVFHTL 594 Query: 570 VSVSLGAVKIEPSQYSSPHQIASAATRAKKQAKKIPGNSLFIERRI 615 ++SLG VK+EP Y S HQIA+A AKKQAKKIPGNSLFI+RR+ Sbjct: 595 ATISLGLVKVEPGHYGSHHQIATATADAKKQAKKIPGNSLFIDRRL 640 >ref|YP_001099332.1| hypothetical protein HEAR1023 [Herminiimonas arsenicoxydans] emb|CAL61205.1| conserved hypothetical protein; putative EAL, GGDEF, CBS domains [Herminiimonas arsenicoxydans] Length = 611 Score = 814 bits (2102), Expect = 0.0, Method: Compositional matrix adjust. Identities = 380/587 (64%), Positives = 472/587 (80%) Query: 28 SGTEDPMLSLLHEIIAQRKLTALFQPIVRMRNGEILGYEGLIRGPSNTPLHSPLALFKVA 87 S +D + L EII R+LT LFQPI+RM++GEI+GYEGLIRGPS++PLHSPL LFKVA Sbjct: 6 SDADDYLAQRLREIILHRQLTPLFQPIIRMQSGEIIGYEGLIRGPSDSPLHSPLNLFKVA 65 Query: 88 RAHNMSVQMEYLCRHIVLTRFAQLGLPGNLFLNVSPGALMQPEAIQGETLRYLDTLGVNP 147 R+ N+SV++E+LCR I L +FA+L LPG LFLNVSP L+QP+ GETL Y+ +G+NP Sbjct: 66 RSCNLSVEVEHLCRRITLEKFAELQLPGRLFLNVSPECLVQPDVRHGETLGYIHEVGINP 125 Query: 148 QRIIIELTENEPTYDYAQLRNAAMHYRDMGFQIAIDDLGEGFSSLRLWSELQPEYVKVDM 207 +R+IIELTE+ PTYDY LR A HYR MGF+IAIDDLGEGFSSLRLWSEL+PEYVK+DM Sbjct: 126 ERVIIELTESHPTYDYELLREAVTHYRAMGFRIAIDDLGEGFSSLRLWSELRPEYVKIDM 185 Query: 208 HFVQGINHDPMKLQFVRSIQEIAEKSGSIVIAEGIESQAELLTIRDLGIACGQGYHISRP 267 HFVQGINHDP+KLQFVRSIQEIAEKSG+IVIAEGIE+ AELL IRDLG++ GQGY I+RP Sbjct: 186 HFVQGINHDPIKLQFVRSIQEIAEKSGTIVIAEGIETDAELLMIRDLGVSYGQGYKIARP 245 Query: 268 LPEPPVSISDDVTKTLRRDKVPLDAKKYGPGKHSTTVFKLLRETRYVSPEVSNDTVYDMF 327 P ++S D+ LR + V + + G G T KLLR + VSPEV N+ +Y+MF Sbjct: 246 HAHPATALSADLRNLLRHNGVAVYPHEAGRGHKILTALKLLRSVQSVSPEVHNNRIYEMF 305 Query: 328 VNDPQLQALPVVSNGLPIGLINRYSMVERFARLYGRELYGKKSCAFFMDPNPILTEQSTS 387 +DP L+ +PVVSNGLP+GLI R ++++RFAR Y REL+GKKSC FMD NP++T+++T+ Sbjct: 306 NSDPTLEVIPVVSNGLPVGLITRANLIDRFARPYLRELHGKKSCTLFMDSNPLITDKNTA 365 Query: 388 LQDLSNLLVHAESHHLSNGFIITDRGQYMGLGTGHDLLREITQMQIDAARHANPLTQLPG 447 L LS ++V A+ HHL NGFIITD GQYMG+G HDL+REITQMQI AAR+ANPLT LPG Sbjct: 366 LHALSQIIVDADRHHLFNGFIITDAGQYMGMGNAHDLMREITQMQISAARYANPLTLLPG 425 Query: 448 NVPINDHIEYLLQSGVEFCICYCDLDQFKPFNDVYGYRKGDDMIQATGRVLQQACDPELD 507 NVPI++HI+ LL++G FC CY DLD FKP+NDVYGYRKGDD+++ TG++L CDP+ D Sbjct: 426 NVPIDEHIDRLLENGTRFCACYVDLDHFKPYNDVYGYRKGDDILRVTGKILSGHCDPQRD 485 Query: 508 FIGHIGGDDFLILFQSEDWEKRCRSMLDNFDAETRGFYYDEDVERGGYYTEDRQGNRVFH 567 F+GHIGGDDF+ILFQSEDWE+RCR++LD F + FY +ED RGGY +EDR+G +VFH Sbjct: 486 FVGHIGGDDFIILFQSEDWEQRCRAILDAFASAAPDFYSEEDRLRGGYVSEDRRGEKVFH 545 Query: 568 KLVSVSLGAVKIEPSQYSSPHQIASAATRAKKQAKKIPGNSLFIERR 614 LVS+SLG VK+EP QY S H+IA+A AK+QAKKIPGNSLFI+RR Sbjct: 546 TLVSISLGLVKVEPGQYLSHHKIATATAEAKQQAKKIPGNSLFIDRR 592 >ref|YP_004694380.1| diguanylate cyclase/phosphodiesterase with CBS domains [Nitrosomonas sp. Is79A3] gb|AEJ00981.1| diguanylate cyclase/phosphodiesterase with CBS domains [Nitrosomonas sp. Is79A3] Length = 626 Score = 707 bits (1826), Expect = 0.0, Method: Compositional matrix adjust. Identities = 338/577 (58%), Positives = 427/577 (74%) Query: 38 LHEIIAQRKLTALFQPIVRMRNGEILGYEGLIRGPSNTPLHSPLALFKVARAHNMSVQME 97 L +II QR+LT FQPI+ M GEI YEGLIRGPSN+PLHSPL+LF+ A + +++E Sbjct: 31 LIQIIEQRQLTPNFQPIISMATGEIYAYEGLIRGPSNSPLHSPLSLFRAAGQFGLLLEVE 90 Query: 98 YLCRHIVLTRFAQLGLPGNLFLNVSPGALMQPEAIQGETLRYLDTLGVNPQRIIIELTEN 157 LCR + L F Q L G LFLNVSP L+ GETL Y+ +LG+ P R++IELTEN Sbjct: 91 RLCRQVTLEAFVQQKLMGKLFLNVSPECLLDANFKNGETLDYMRSLGLEPHRVVIELTEN 150 Query: 158 EPTYDYAQLRNAAMHYRDMGFQIAIDDLGEGFSSLRLWSELQPEYVKVDMHFVQGINHDP 217 +PTYDY+ L A HYR MG +IAIDDLGEGFSSLRLW EL+PEYVK+D HF+Q IN DP Sbjct: 151 QPTYDYSLLLEAVRHYRSMGLEIAIDDLGEGFSSLRLWFELRPEYVKIDQHFIQNINQDP 210 Query: 218 MKLQFVRSIQEIAEKSGSIVIAEGIESQAELLTIRDLGIACGQGYHISRPLPEPPVSISD 277 +KLQFVRSIQ+IAE S + +IAEGIE+ AE + ++DLGI GQGY I+RP P IS Sbjct: 211 IKLQFVRSIQQIAENSSTQIIAEGIETHAEFMIVKDLGILLGQGYFIARPNAIPATIIST 270 Query: 278 DVTKTLRRDKVPLDAKKYGPGKHSTTVFKLLRETRYVSPEVSNDTVYDMFVNDPQLQALP 337 D +L + + + +K + + + KLL V+PE+ ND VYD F L++LP Sbjct: 271 DAANSLNHNGIMVFPRKNTVIQKTLSTMKLLISVPPVTPEMDNDEVYDRFNAQLALESLP 330 Query: 338 VVSNGLPIGLINRYSMVERFARLYGRELYGKKSCAFFMDPNPILTEQSTSLQDLSNLLVH 397 VV G+PIG+I R +++ +AR Y RELYGKKSC FMD P++ +++ SLQ+LSN +V Sbjct: 331 VVEQGIPIGIITRNRLIDAYARPYWRELYGKKSCTLFMDSAPLVVDKNISLQELSNAVVA 390 Query: 398 AESHHLSNGFIITDRGQYMGLGTGHDLLREITQMQIDAARHANPLTQLPGNVPINDHIEY 457 A HLSNGFIITDRGQY+G+GTGHDL+REITQ+QI AAR+ANPLT LPGNVPI++HI+ Sbjct: 391 AGQRHLSNGFIITDRGQYLGVGTGHDLMREITQLQITAARYANPLTLLPGNVPIDEHIDR 450 Query: 458 LLQSGVEFCICYCDLDQFKPFNDVYGYRKGDDMIQATGRVLQQACDPELDFIGHIGGDDF 517 LL+S V FC+CYCDLD FKPFND+YGYRKGD++I+ TG +L QACD E DFIGHIGGDDF Sbjct: 451 LLESQVIFCVCYCDLDAFKPFNDIYGYRKGDEVIRVTGNMLSQACDLERDFIGHIGGDDF 510 Query: 518 LILFQSEDWEKRCRSMLDNFDAETRGFYYDEDVERGGYYTEDRQGNRVFHKLVSVSLGAV 577 +ILFQS DWE RCR +L +F E F+ E ++GGY + DR+G RVFH LV++S+GAV Sbjct: 511 IILFQSLDWEIRCRHVLASFTREIMHFFKPEHCDQGGYSSIDRKGQRVFHSLVTLSIGAV 570 Query: 578 KIEPSQYSSPHQIASAATRAKKQAKKIPGNSLFIERR 614 + P +SS H+I++ AT AK QAK+I GNSLFIERR Sbjct: 571 LVAPGIFSSHHEISTIATTAKHQAKRIAGNSLFIERR 607 >ref|YP_004039747.1| diguanylate cyclase/phosphodiesterase [Methylovorus sp. MP688] gb|ADQ84511.1| diguanylate cyclase/phosphodiesterase [Methylovorus sp. MP688] Length = 619 Score = 692 bits (1787), Expect = 0.0, Method: Compositional matrix adjust. Identities = 323/577 (55%), Positives = 434/577 (75%) Query: 38 LHEIIAQRKLTALFQPIVRMRNGEILGYEGLIRGPSNTPLHSPLALFKVARAHNMSVQME 97 LH+I+ R+LTA+FQPI +R+ I G+EGLIRGP++T LH PLALF+ A H++ +++E Sbjct: 41 LHKILKHRQLTAVFQPIADLRSASIFGHEGLIRGPADTRLHMPLALFEEAEQHHLLLEVE 100 Query: 98 YLCRHIVLTRFAQLGLPGNLFLNVSPGALMQPEAIQGETLRYLDTLGVNPQRIIIELTEN 157 +L R +VL FAQ G LFLNVSP +L+QP +G TL Y+ LG++P +IIELTEN Sbjct: 101 HLSRQVVLESFAQQGANVKLFLNVSPASLLQPHVARGATLSYIHQLGLDPHDVIIELTEN 160 Query: 158 EPTYDYAQLRNAAMHYRDMGFQIAIDDLGEGFSSLRLWSELQPEYVKVDMHFVQGINHDP 217 PT+DY LR+AA HYR MGF+IA+DDLGEGFSSLRLWSEL+P+YVK+D HF++ I+ D Sbjct: 161 SPTFDYDTLRHAAEHYRSMGFEIAMDDLGEGFSSLRLWSELRPDYVKIDKHFIRNIDRDQ 220 Query: 218 MKLQFVRSIQEIAEKSGSIVIAEGIESQAELLTIRDLGIACGQGYHISRPLPEPPVSISD 277 +KL FVRSIQ+IA SG+ VIAEGIE++AEL+ ++DL I GQGY I+RP ++S Sbjct: 221 VKLDFVRSIQQIALNSGTKVIAEGIETEAELMIVKDLKIPYGQGYLINRPQASLHTALSP 280 Query: 278 DVTKTLRRDKVPLDAKKYGPGKHSTTVFKLLRETRYVSPEVSNDTVYDMFVNDPQLQALP 337 + ++R+ V + P + + + KL+R VSP+ SND VY +F P L +LP Sbjct: 281 VAAELMQRNAVHVYQSAAVPVQARSNISKLIRYVSPVSPQTSNDDVYQIFEKQPSLYSLP 340 Query: 338 VVSNGLPIGLINRYSMVERFARLYGRELYGKKSCAFFMDPNPILTEQSTSLQDLSNLLVH 397 VV+ G P+GLI+RY+M++ AR Y RELYGK+ C+ FMD P++ + S SLQ LS+L+++ Sbjct: 341 VVAQGRPVGLISRYNMIDHLARPYTRELYGKRYCSIFMDNQPLIVDNSLSLQALSDLIIN 400 Query: 398 AESHHLSNGFIITDRGQYMGLGTGHDLLREITQMQIDAARHANPLTQLPGNVPINDHIEY 457 E HHLSNGFIIT+ G Y+G+G+GHDLLREITQMQI+AAR+ANPLT LPGNVPIN+H++ Sbjct: 401 MEPHHLSNGFIITESGNYLGMGSGHDLLREITQMQINAARYANPLTMLPGNVPINEHMDR 460 Query: 458 LLQSGVEFCICYCDLDQFKPFNDVYGYRKGDDMIQATGRVLQQACDPELDFIGHIGGDDF 517 LLQ+G+ F CYCDLD FKPFNDVYG+R+GD++IQ TG++L + ELDF+GH+GGDDF Sbjct: 461 LLQAGITFHACYCDLDSFKPFNDVYGFRRGDELIQYTGKLLNEQIANELDFVGHVGGDDF 520 Query: 518 LILFQSEDWEKRCRSMLDNFDAETRGFYYDEDVERGGYYTEDRQGNRVFHKLVSVSLGAV 577 +++FQSEDWE+RC +L+ FY + D +RGG EDRQGN +F+ VS+S+G+V Sbjct: 521 ILIFQSEDWEERCLHVLNTLAQAIPAFYDEADRQRGGIAAEDRQGNPLFYPFVSMSVGSV 580 Query: 578 KIEPSQYSSPHQIASAATRAKKQAKKIPGNSLFIERR 614 K +P + S H++A+A T AKKQAKKI GNSLF+ERR Sbjct: 581 KADPVGFRSHHEVAAAMTIAKKQAKKISGNSLFLERR 617 >ref|YP_003051048.1| diguanylate cyclase/phosphodiesterase [Methylovorus glucosetrophus SIP3-4] gb|ACT50521.1| diguanylate cyclase/phosphodiesterase [Methylovorus glucosetrophus SIP3-4] Length = 619 Score = 692 bits (1786), Expect = 0.0, Method: Compositional matrix adjust. Identities = 323/577 (55%), Positives = 434/577 (75%) Query: 38 LHEIIAQRKLTALFQPIVRMRNGEILGYEGLIRGPSNTPLHSPLALFKVARAHNMSVQME 97 LH+I+ R+LTA+FQPI +R+ I G+EGLIRGP++T LH PLALF+ A H++ +++E Sbjct: 41 LHKILKHRQLTAVFQPIADLRSASIFGHEGLIRGPADTRLHMPLALFEEAEQHHLLLEVE 100 Query: 98 YLCRHIVLTRFAQLGLPGNLFLNVSPGALMQPEAIQGETLRYLDTLGVNPQRIIIELTEN 157 +L R +VL FAQ G LFLNVSP +L+QP +G TL Y+ LG++P +IIELTEN Sbjct: 101 HLSRQVVLESFAQQGANAKLFLNVSPASLLQPHVARGATLSYIHQLGLDPHDVIIELTEN 160 Query: 158 EPTYDYAQLRNAAMHYRDMGFQIAIDDLGEGFSSLRLWSELQPEYVKVDMHFVQGINHDP 217 PT+DY LR+AA HYR MGF+IA+DDLGEGFSSLRLWSEL+P+YVK+D HF++ I+ D Sbjct: 161 SPTFDYDTLRHAAEHYRSMGFEIAMDDLGEGFSSLRLWSELRPDYVKIDKHFIRNIDRDQ 220 Query: 218 MKLQFVRSIQEIAEKSGSIVIAEGIESQAELLTIRDLGIACGQGYHISRPLPEPPVSISD 277 +KL FVRSIQ+IA SG+ VIAEGIE++AEL+ ++DL I GQGY I+RP ++S Sbjct: 221 VKLDFVRSIQQIALNSGTKVIAEGIETEAELMIVKDLKIPYGQGYLINRPQASLHTALSP 280 Query: 278 DVTKTLRRDKVPLDAKKYGPGKHSTTVFKLLRETRYVSPEVSNDTVYDMFVNDPQLQALP 337 + ++R+ V + P + + + KL+R VSP+ SND VY +F P L +LP Sbjct: 281 VAAELMQRNAVHVYQSAAVPVQARSNISKLIRYVSPVSPQTSNDDVYQIFEKQPSLYSLP 340 Query: 338 VVSNGLPIGLINRYSMVERFARLYGRELYGKKSCAFFMDPNPILTEQSTSLQDLSNLLVH 397 VV+ G P+GLI+RY+M++ AR Y RELYGK+ C+ FMD P++ + S SLQ LS+L+++ Sbjct: 341 VVAQGRPVGLISRYNMIDHLARPYTRELYGKRYCSIFMDNQPLVVDNSLSLQALSDLIIN 400 Query: 398 AESHHLSNGFIITDRGQYMGLGTGHDLLREITQMQIDAARHANPLTQLPGNVPINDHIEY 457 E HHLSNGFIIT+ G Y+G+G+GHDLLREITQMQI+AAR+ANPLT LPGNVPIN+H++ Sbjct: 401 MEPHHLSNGFIITESGNYLGMGSGHDLLREITQMQINAARYANPLTMLPGNVPINEHMDR 460 Query: 458 LLQSGVEFCICYCDLDQFKPFNDVYGYRKGDDMIQATGRVLQQACDPELDFIGHIGGDDF 517 LLQ+G+ F CYCDLD FKPFNDVYG+R+GD++IQ TG++L + ELDF+GH+GGDDF Sbjct: 461 LLQAGITFHACYCDLDSFKPFNDVYGFRRGDELIQYTGKLLNEQIANELDFVGHVGGDDF 520 Query: 518 LILFQSEDWEKRCRSMLDNFDAETRGFYYDEDVERGGYYTEDRQGNRVFHKLVSVSLGAV 577 +++FQSEDWE+RC +L+ FY + D +RGG EDRQGN +F+ VS+S+G+V Sbjct: 521 ILIFQSEDWEERCLRVLNILAQAIPAFYDEADRQRGGIAAEDRQGNPLFYPFVSMSVGSV 580 Query: 578 KIEPSQYSSPHQIASAATRAKKQAKKIPGNSLFIERR 614 K +P + S H++A+A T AKKQAKKI GNSLF+ERR Sbjct: 581 KADPVGFRSHHEVAAAMTIAKKQAKKISGNSLFLERR 617 >ref|YP_003525074.1| diguanylate cyclase/phosphodiesterase [Sideroxydans lithotrophicus ES-1] gb|ADE12687.1| diguanylate cyclase/phosphodiesterase [Sideroxydans lithotrophicus ES-1] Length = 615 Score = 682 bits (1760), Expect = 0.0, Method: Compositional matrix adjust. Identities = 320/598 (53%), Positives = 430/598 (71%), Gaps = 3/598 (0%) Query: 20 ARA---AGGTMSGTEDPMLSLLHEIIAQRKLTALFQPIVRMRNGEILGYEGLIRGPSNTP 76 ARA A ++ T++ ++ L EI+ QR+L+ALFQPI+ +++GE LG+EGLIRGP+++P Sbjct: 14 ARALFLATQALTRTKEQPMTPLREILEQRRLSALFQPILDLKSGEFLGFEGLIRGPADSP 73 Query: 77 LHSPLALFKVARAHNMSVQMEYLCRHIVLTRFAQLGLPGNLFLNVSPGALMQPEAIQGET 136 LHSP+ LF A + ++ME L R VL FA+L LPG LFLNVSP L P G+T Sbjct: 74 LHSPVNLFGAAEQQGLQLEMEMLSRQTVLETFAELKLPGYLFLNVSPETLTHPSFKNGQT 133 Query: 137 LRYLDTLGVNPQRIIIELTENEPTYDYAQLRNAAMHYRDMGFQIAIDDLGEGFSSLRLWS 196 L +L LG++P+R+IIE+TEN+PT+D+ +R+A +HYR MGF+IAIDDLGEGFSSLRLWS Sbjct: 134 LSFLHELGLDPERVIIEITENQPTFDFDGMRSALLHYRSMGFKIAIDDLGEGFSSLRLWS 193 Query: 197 ELQPEYVKVDMHFVQGINHDPMKLQFVRSIQEIAEKSGSIVIAEGIESQAELLTIRDLGI 256 EL+PE++K+DMHFVQG++ DP+KLQF++SIQ IAE G+ VIAEG+E++AEL ++D+GI Sbjct: 194 ELRPEFIKIDMHFVQGVDSDPIKLQFLKSIQHIAESCGTQVIAEGVETEAELRVVKDIGI 253 Query: 257 ACGQGYHISRPLPEPPVSISDDVTKTLRRDKVPLDAKKYGPGKHSTTVFKLLRETRYVSP 316 A GQGY I+RP P PP+ S + + + + K + TT KLL V P Sbjct: 254 ALGQGYFIARPNPTPPLLASAKTSSIINSSNIAIFPKAELNHRSQTTAHKLLTYVEPVHP 313 Query: 317 EVSNDTVYDMFVNDPQLQALPVVSNGLPIGLINRYSMVERFARLYGRELYGKKSCAFFMD 376 E ND V+ F +P L+ +PVV NG P GLINRY ++RFA+ Y REL GKK C + Sbjct: 314 ETLNDHVFQRFSVNPALRIIPVVKNGRPHGLINRYQFIDRFAKPYQRELLGKKPCDELVQ 373 Query: 377 PNPILTEQSTSLQDLSNLLVHAESHHLSNGFIITDRGQYMGLGTGHDLLREITQMQIDAA 436 P+L E++ +++LS+ L A+S H ++GFIIT+ G+Y+G+ +G DLLRE+TQMQ++AA Sbjct: 374 GEPLLVEKNMPIEELSHFLAEADSRHFADGFIITENGRYIGVASGQDLLRELTQMQLEAA 433 Query: 437 RHANPLTQLPGNVPINDHIEYLLQSGVEFCICYCDLDQFKPFNDVYGYRKGDDMIQATGR 496 R+ANPLT LPGNVPIN+HIE LLQ+ F CYCDLD FKPFND Y YRKGD+MIQ TGR Sbjct: 434 RYANPLTLLPGNVPINEHIERLLQANTPFVACYCDLDHFKPFNDTYSYRKGDEMIQLTGR 493 Query: 497 VLQQACDPELDFIGHIGGDDFLILFQSEDWEKRCRSMLDNFDAETRGFYYDEDVERGGYY 556 +L ACDP+LDFIGHIGGDDF++L QS DW+ RC L +F+ + +E + GGY Sbjct: 494 ILNWACDPKLDFIGHIGGDDFILLMQSRDWKTRCEQALRSFEQAAELMFKEEHLAAGGYS 553 Query: 557 TEDRQGNRVFHKLVSVSLGAVKIEPSQYSSPHQIASAATRAKKQAKKIPGNSLFIERR 614 +E R G FH L S+S+GA ++ P Q+ S H++++A T AKK AKK GNSLFIE+R Sbjct: 554 SEGRDGTVKFHPLTSLSIGATQVAPGQFISHHEVSAAMTDAKKMAKKTSGNSLFIEQR 611 >ref|YP_003049090.1| diguanylate cyclase/phosphodiesterase [Methylotenera mobilis JLW8] gb|ACT48563.1| diguanylate cyclase/phosphodiesterase [Methylotenera mobilis JLW8] Length = 607 Score = 680 bits (1755), Expect = 0.0, Method: Compositional matrix adjust. Identities = 320/579 (55%), Positives = 428/579 (73%), Gaps = 5/579 (0%) Query: 38 LHEIIAQRKLTALFQPIVRMRNGEILGYEGLIRGPSNTPLHSPLALFKVARAHNMSVQME 97 LH+II R+LTA+FQPI+ M+ G+ +GYEGLIRGP N+ LHSP+ALF +AR + ++E Sbjct: 25 LHDIIQNRQLTAVFQPILNMQQGKFIGYEGLIRGPINSVLHSPMALFAMARNCGLVTELE 84 Query: 98 YLCRHIVLTRFAQLGLPGNLFLNVSPGALMQPEAIQGETLRYLDTLGVNPQRIIIELTEN 157 YLCR VL F++ LPG +FLN+SP L+Q + GETL+Y+D LG+ P ++IIELTEN Sbjct: 85 YLCRQTVLESFSKQNLPGKIFLNISPDILLQKYSKSGETLKYMDALGLKPSQVIIELTEN 144 Query: 158 EPTYDYAQLRNAAMHYRDMGFQIAIDDLGEGFSSLRLWSELQPEYVKVDMHFVQGINHDP 217 T DY +R+A HYRDMGF+IAIDDLGEGFS LRLWSE++P+YVK+D HF Q I+ DP Sbjct: 145 AQTLDYQLMRDATHHYRDMGFEIAIDDLGEGFSGLRLWSEIRPDYVKIDKHFTQNIHQDP 204 Query: 218 MKLQFVRSIQEIAEKSGSIVIAEGIESQAELLTIRDLGIACGQGYHISRPLPEPPVSISD 277 +KLQF RSIQEIAEKSG+ VIAEGIES +L+ IRDLGIA QGYHI+RP P P + S Sbjct: 205 VKLQFARSIQEIAEKSGAQVIAEGIESHEQLMAIRDLGIAYSQGYHIARPHPTPILEASS 264 Query: 278 DVTKTLRRDKVPLDAKKYGPGKHSTTVFKLLRETRYVSPEVSNDTVYDMFVNDPQLQALP 337 D+ TL R ++++ ++ TV KLL+ + VSP N+ V+ MF + +L ++P Sbjct: 265 DIIHTLVR----FESERENLLQNRATVEKLLKHSTPVSPTCLNEDVFKMFDENQELYSIP 320 Query: 338 VVSNGLPIGLINRYSMVERFARLYGRELYGKKSCAFFMDPNPILTEQSTSLQDLSNLLVH 397 VV NG P+GLINR M+ +AR + RELYG++ C D + ++ ++ TSL++LS+L++ Sbjct: 321 VVENGRPLGLINRSIMINDYARPFRRELYGQRPCEIMTDKSALIVDKDTSLKNLSDLILQ 380 Query: 398 AESHHLSNGFIITDRGQYMGLGTGHDLLREITQMQIDAARHANPLTQLPGNVPINDHIEY 457 ++ HHLS GFI+T+ GQY G+ +GHDLLR IT+MQID AR+ANPLT LPGNVPI++ I+ Sbjct: 381 SKPHHLSAGFIVTENGQYAGMASGHDLLRLITKMQIDTARYANPLTLLPGNVPISEQIDS 440 Query: 458 LLQSGVEFCICYCDLDQFKPFNDVYGYRKGDDMIQATGRVLQQACDPELDFIGHIGGDDF 517 LLQSG +F CYCDLD FKP+NDVYGY+KGD++IQ TG++L AC P DF+GHIGGDDF Sbjct: 441 LLQSGTQFVACYCDLDCFKPYNDVYGYKKGDEVIQRTGQILADACGP-YDFVGHIGGDDF 499 Query: 518 LILFQSEDWEKRCRSMLDNFDAETRGFYYDEDVERGGYYTEDRQGNRVFHKLVSVSLGAV 577 +ILFQS++WE RC ++L + FY D + GG T+DRQG + FH +S+S+GA+ Sbjct: 500 IILFQSKNWESRCNTLLSQIEKVAPTFYSLADQKCGGIITQDRQGEQRFHPFISLSVGAL 559 Query: 578 KIEPSQYSSPHQIASAATRAKKQAKKIPGNSLFIERRIP 616 + + Y S H++++A AKKQAK+I GNSLFIERR P Sbjct: 560 IVNSALYHSHHEVSTACVNAKKQAKEIAGNSLFIERRSP 598 >ref|YP_003848538.1| diguanylate cyclase/phosphodiesterase [Gallionella capsiferriformans ES-2] gb|ADL56774.1| diguanylate cyclase/phosphodiesterase [Gallionella capsiferriformans ES-2] Length = 630 Score = 665 bits (1717), Expect = 0.0, Method: Compositional matrix adjust. Identities = 302/578 (52%), Positives = 424/578 (73%), Gaps = 1/578 (0%) Query: 38 LHEIIAQRKLTALFQPIVRMRNGEILGYEGLIRGPSNTPLHSPLALFKVARAHNMSVQME 97 L EIIAQRKL+ALFQPI+ +++G+ LG+EGLIRGP+++PLHSP+ LF A N+S+++E Sbjct: 47 LQEIIAQRKLSALFQPIIDLKSGDFLGFEGLIRGPADSPLHSPINLFGAALQQNLSLEVE 106 Query: 98 YLCRHIVLTRFAQLGLPGNLFLNVSPGALMQPEAIQGETLRYLDTLGVNPQRIIIELTEN 157 L R VL F++ LPG+LFLN+SP L P G+TL ++ TL ++P R+++E+TEN Sbjct: 107 MLARQTVLEAFSRQKLPGSLFLNISPDTLTHPSFKNGQTLEFMRTLNIDPARVVMEITEN 166 Query: 158 EPTYDYAQLRNAAMHYRDMGFQIAIDDLGEGFSSLRLWSELQPEYVKVDMHFVQGINHDP 217 +PT+D+ ++RNA +HYR+MGF+ AIDDLGEGFSSLRLWSEL+PEY+K+DMHFVQG++HDP Sbjct: 167 QPTFDFTEMRNALLHYRNMGFKTAIDDLGEGFSSLRLWSELRPEYIKIDMHFVQGVDHDP 226 Query: 218 MKLQFVRSIQEIAEKSGSIVIAEGIESQAELLTIRDLGIACGQGYHISRPLPEPPVSISD 277 +KLQF++SIQ+IAE G+ VIAEGIE++ EL ++D+GIA GQGY I+RP P PP+ S Sbjct: 227 IKLQFLKSIQQIAESCGTRVIAEGIETEGELRVVKDIGIALGQGYFIARPSPTPPLLASS 286 Query: 278 DVTKTLRRDKVPLDAKKYGPGKHSTTVFKLLRETRYVSPEVSNDTVYDMFVNDPQLQALP 337 + ++ + + + + + T KLL V P+ SN+ V++ F ++ L +P Sbjct: 287 ETSRIISSNNIAIFPMMEVSYRSQMTAQKLLSYIEPVHPDTSNEQVFERFSSNAALHMIP 346 Query: 338 VVSNGLPIGLINRYSMVERFARLYGRELYGKKSCAFFMDPN-PILTEQSTSLQDLSNLLV 396 VV NGLP+GLINRY ++ +++ + REL GKK+C F+ P+L E+S +++LS L Sbjct: 347 VVKNGLPVGLINRYQFIDSYSKPFQRELLGKKACNKFIPATAPLLVEKSMPIEELSYFLA 406 Query: 397 HAESHHLSNGFIITDRGQYMGLGTGHDLLREITQMQIDAARHANPLTQLPGNVPINDHIE 456 A++ + ++GFIIT+ +Y+G+ +G DLLRE+T+MQI++AR+ANPL+ LPGNVPIN+HIE Sbjct: 407 EADNRYFADGFIITENNRYIGVASGQDLLRELTRMQIESARYANPLSLLPGNVPINEHIE 466 Query: 457 YLLQSGVEFCICYCDLDQFKPFNDVYGYRKGDDMIQATGRVLQQACDPELDFIGHIGGDD 516 LL + F CYCDLD FKPFND Y YRKGD+MIQ TGR+L ACD + DFIGHIGGDD Sbjct: 467 RLLLANTSFVACYCDLDHFKPFNDTYSYRKGDEMIQLTGRLLNWACDHKQDFIGHIGGDD 526 Query: 517 FLILFQSEDWEKRCRSMLDNFDAETRGFYYDEDVERGGYYTEDRQGNRVFHKLVSVSLGA 576 F++L QS DW+ RC L +F+ + +E + GGY +E R G FH L S+S+GA Sbjct: 527 FILLMQSRDWKARCEQALRSFEQAASLLFKEEHLIAGGYTSEGRDGQMHFHPLTSLSIGA 586 Query: 577 VKIEPSQYSSPHQIASAATRAKKQAKKIPGNSLFIERR 614 + I P Q+ S H++++A + AKK AKKI GNSLFIE+R Sbjct: 587 ISIAPGQFISHHEVSAAMSSAKKMAKKISGNSLFIEQR 624 >gb|EGW61338.1| diguanylate cyclase/phosphodiesterase [Dechlorosoma suillum PS] Length = 643 Score = 648 bits (1671), Expect = 0.0, Method: Compositional matrix adjust. Identities = 310/598 (51%), Positives = 420/598 (70%), Gaps = 5/598 (0%) Query: 26 TMSGTEDPMLSLLHEIIAQRKLTALFQPIVRMRNGEILGYEGLIRGPSNTPLHSPLALFK 85 ++ G E+ +L E+I + +LT +FQPI+ R +G+EGLIRGP ++PLH+P ALF+ Sbjct: 48 SLPGAEEA--DILLELIREGRLTPVFQPILDYRGQSYMGFEGLIRGPIDSPLHTPAALFE 105 Query: 86 VARAHNMSVQMEYLCRHIVLTRFAQLGLPGNLFLNVSPGALMQPEAIQGETLRYLDTLGV 145 +AR ++++++E CR + FAQL LPGNLF+NVSPG L PE GET L LG+ Sbjct: 106 LARRLDLTMELERACRIAIFRAFAQLNLPGNLFVNVSPGCLKDPEFRNGETQGLLRELGL 165 Query: 146 NPQRIII-ELTENEPTYDYAQLRNAAMHYRDMGFQIAIDDLGEGFSSLRLWSELQPEYVK 204 +P RIII ELTEN+ D+A L +A MHYR G++IAIDDLGEGFS+LRLWSEL+PEYVK Sbjct: 166 SPSRIIIIELTENQQIEDFADLHDALMHYRGQGYRIAIDDLGEGFSNLRLWSELRPEYVK 225 Query: 205 VDMHFVQGINHDPMKLQFVRSIQEIAEKSGSIVIAEGIESQAELLTIRDLGIACGQGYHI 264 +D HF+QGI D +K + V S+ EIAE G+ +IAEGIE++A+ T+RDLGIACGQG+ I Sbjct: 226 IDRHFIQGIADDALKFKLVSSMHEIAETCGAYIIAEGIETEADFTTVRDLGIACGQGFFI 285 Query: 265 SRPLPEPPVSISDDVTKTLRRDKVPLDAKKYGPGKHSTTVFKLLRETRYVSPEVSNDTVY 324 +RP P P D L+ ++ + G G + E ++P+ ND VY Sbjct: 286 ARPAPTPRTLPESDTLAALKNRQIAIFPNAGGAGGSTARALSHFIEP--IAPDACNDMVY 343 Query: 325 DMFVNDPQLQALPVVSNGLPIGLINRYSMVERFARLYGRELYGKKSCAFFMDPNPILTEQ 384 F ++P+L LPVV G P+GLINR+++++RFAR + RELYGKK C FMDP P++ +Q Sbjct: 344 QRFEDNPELHVLPVVHQGQPLGLINRHNLIDRFARPFRRELYGKKPCTLFMDPAPLVVDQ 403 Query: 385 STSLQDLSNLLVHAESHHLSNGFIITDRGQYMGLGTGHDLLREITQMQIDAARHANPLTQ 444 + S+Q++ ++ A H+L +GF+ITD+G Y+G+G+G DL+ IT+MQI AAR+ANPLTQ Sbjct: 404 NLSVQEVGLMIARAAKHYLYDGFVITDQGSYVGVGSGQDLMAMITEMQISAARYANPLTQ 463 Query: 445 LPGNVPINDHIEYLLQSGVEFCICYCDLDQFKPFNDVYGYRKGDDMIQATGRVLQQACDP 504 LPGNVPIN+H E LL+S F CY D+D FKPFND YGYRKGDD+IQ G ++ + DP Sbjct: 464 LPGNVPINEHAERLLESQTAFAACYYDIDNFKPFNDAYGYRKGDDVIQMLGLLMAEVADP 523 Query: 505 ELDFIGHIGGDDFLILFQSEDWEKRCRSMLDNFDAETRGFYYDEDVERGGYYTEDRQGNR 564 LDFIGHIGGDDF+ILFQS DWE+RC L FD ED+ RGG+ EDR+G Sbjct: 524 RLDFIGHIGGDDFIILFQSPDWEERCARALRLFDQRMPALVAPEDLARGGFVGEDRKGRT 583 Query: 565 VFHKLVSVSLGAVKIEPSQYSSPHQIASAATRAKKQAKKIPGNSLFIERRIPATFSWA 622 VF+ L S+S+GA+++EP +SS H++A+AA+ AKKQAK+ G++LFIERR P + A Sbjct: 584 VFNPLPSLSIGALRVEPGLFSSHHEVAAAASMAKKQAKRQAGSTLFIERRRPGLTAAA 641