BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0037.0046.p         (220 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003775272.1| hypothetical protein Hsero_1854 [Herbaspiril...   452   e-125
ref|YP_003050303.1| hypothetical protein Msip34_0528 [Methylovor...   131   8e-29
ref|YP_004038971.1| hypothetical protein MPQ_0553 [Methylovorus ...   130   2e-28

>ref|YP_003775272.1| hypothetical protein Hsero_1854 [Herbaspirillum seropedicae SmR1]
 gb|ADJ63364.1| hypothetical protein Hsero_1854 [Herbaspirillum seropedicae SmR1]
          Length = 220

 Score =  452 bits (1163), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 219/220 (99%), Positives = 220/220 (100%)

Query: 1   MKCKRFSGLLAGALSLLLVLPPPLAQAEAEGRLFQPTGENLMISPPAGWRLAYMDGDPEG 60
           MKCKRFSGLLAGALSLLLVLPPPLAQAEAEGRLFQPTGENLMISPPAGWRLAYMDGDPEG
Sbjct: 1   MKCKRFSGLLAGALSLLLVLPPPLAQAEAEGRLFQPTGENLMISPPAGWRLAYMDGDPEG 60

Query: 61  DYVVDFLPQNEAHDSWREGYMSVQRRTFPEAALRDNIRARNLTMPQVAISEVMQIAQRKC 120
           DYVVDFLPQNEAHDSWREGYMSVQRRTFPEAALRDNIRARNLTMPQVAISEVMQIAQRKC
Sbjct: 61  DYVVDFLPQNEAHDSWREGYMSVQRRTFPEAALRDNIRARNLTMPQVAISEVMQIAQRKC 120

Query: 121 PGRFVPMGQKDSLTNNIPTSVSGGFCDRLGPSAPFGEGSVMAVFEGKERLFVVQFSWRPS 180
           PGRFVPMGQKDSLTNNIPTSVSGGFCDRLGPSAP+GEGSVMAVFEGKERLFVVQFSWRPS
Sbjct: 121 PGRFVPMGQKDSLTNNIPTSVSGGFCDRLGPSAPYGEGSVMAVFEGKERLFVVQFSWRPS 180

Query: 181 TENELKQFAYRISPARLQQFLDLLNAATLCGGPDEGKCPN 220
           TENELKQFAYRISPARLQQFLDLLNAATLCGGPDEGKCPN
Sbjct: 181 TENELKQFAYRISPARLQQFLDLLNAATLCGGPDEGKCPN 220


>ref|YP_003050303.1| hypothetical protein Msip34_0528 [Methylovorus glucosetrophus
           SIP3-4]
 gb|ACT49776.1| hypothetical protein Msip34_0528 [Methylovorus glucosetrophus
           SIP3-4]
          Length = 220

 Score =  131 bits (329), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 116/209 (55%), Gaps = 5/209 (2%)

Query: 9   LLAGALSLLLVLPPPLAQAEAEGRLFQPTGENLMISPPAGWRLAYMDGDPEGDYVVDFLP 68
           L+A A   L    P  A+    G  F   GE L ++PPAGW++ +M+GDP+G+Y V++ P
Sbjct: 8   LMAAACISLQSALPAFAETVV-GMPFNVKGERLDVTPPAGWKIVWMEGDPKGEYFVEYAP 66

Query: 69  QNEAHDSWREGYMSVQRRTFPEAALRDNIRARNLTMPQVAISEVMQIAQRKCPGRFVPMG 128
             E  ++W+ G++S+ R+ +P A     IR   L +  VA+  +++     C G +  + 
Sbjct: 67  PGEDVETWKTGHLSIIRKPYPSAQTMKEIRDAKLKVADVALIGMVKRLSGSCAG-YEEIT 125

Query: 129 QKDSLTNNIPTSVSGGFCDRLGPSAPFGEGSVMAVFEGKERLFVVQFSWRPSTENELKQF 188
            + +  N + +++ GG+C +   +AP GEG+ +A +E K  ++ VQ+SWRP +E E +  
Sbjct: 126 MRTTTANGLYSALGGGYCGKPSENAPLGEGAFVAFYESKNFIYKVQYSWRPQSEAEKQSS 185

Query: 189 AYRISPARLQQFLDLLNAATLCGGPDEGK 217
            + I  A  + + + + +A LC   DE K
Sbjct: 186 LWAIDAAHAKLYRESMKSAALC---DESK 211


>ref|YP_004038971.1| hypothetical protein MPQ_0553 [Methylovorus sp. MP688]
 gb|ADQ83735.1| conserved hypothetical protein [Methylovorus sp. MP688]
          Length = 193

 Score =  130 bits (326), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 60/187 (32%), Positives = 108/187 (57%), Gaps = 4/187 (2%)

Query: 31  GRLFQPTGENLMISPPAGWRLAYMDGDPEGDYVVDFLPQNEAHDSWREGYMSVQRRTFPE 90
           G  F   GE L ++PPAGW++ +M+GDP+G+Y V++ P  E  ++W+ G++S+ R+ +P 
Sbjct: 2   GMPFNVKGERLDVTPPAGWKIVWMEGDPKGEYFVEYAPPGEDVETWKTGHLSIIRKPYPS 61

Query: 91  AALRDNIRARNLTMPQVAISEVMQIAQRKCPGRFVPMGQKDSLTNNIPTSVSGGFCDRLG 150
           A     IR   L +  VA+  +++     C G +  +  + +  N + +++ GG+C +  
Sbjct: 62  AQTMKEIRDAKLKVADVALIGMVKRLSGSCAG-YEEITMRTTTANGLYSALGGGYCGKPS 120

Query: 151 PSAPFGEGSVMAVFEGKERLFVVQFSWRPSTENELKQFAYRISPARLQQFLDLLNAATLC 210
            +AP GEG+ +A +E K  ++ VQ+SWRP +E E +   + I  A  + + + + +A LC
Sbjct: 121 ENAPLGEGAFVAFYESKNFIYKVQYSWRPQSEAEKQSSLWAIDAAHAKLYRESMKSAALC 180

Query: 211 GGPDEGK 217
              DE K
Sbjct: 181 ---DESK 184