BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0042.p (153 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775269.1| transcription regulator protein [Herbaspiril... 302 1e-80 ref|YP_001354616.1| MarR family transcriptional regulator [Janth... 197 3e-49 ref|YP_001631798.1| MarR family transcriptional regulator [Borde... 184 4e-45 emb|CBJ40785.1| Organic hydroperoxide resistance transcriptional... 174 4e-42 ref|YP_004210840.1| MarR family transcriptional regulator [Rahne... 173 7e-42 ref|YP_786960.1| MarR family transcriptional regulator [Bordetel... 172 1e-41 ref|NP_522667.1| putative transcription regulator protein [Ralst... 172 1e-41 ref|YP_003518413.1| OhrR [Pantoea ananatis LMG 20103] >gi|291150... 172 2e-41 ref|YP_003748421.1| organic hydroperoxide resistance transcripti... 171 3e-41 ref|YP_001909308.1| transcriptional regulator of organic hydrope... 171 3e-41 >ref|YP_003775269.1| transcription regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ63361.1| transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 153 Score = 302 bits (774), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 153/153 (100%), Positives = 153/153 (100%) Query: 1 MVSKTDKRKAAPLLDAQLCFALYSTSLSMSKLYRKLLRDLGITYSQYLVLMVLWEQDQLT 60 MVSKTDKRKAAPLLDAQLCFALYSTSLSMSKLYRKLLRDLGITYSQYLVLMVLWEQDQLT Sbjct: 1 MVSKTDKRKAAPLLDAQLCFALYSTSLSMSKLYRKLLRDLGITYSQYLVLMVLWEQDQLT 60 Query: 61 VSEIGERLVLDSATLTPLLKRMEAQGLVTRERAASDERQVVISLTAEGDTLREKAVELPR 120 VSEIGERLVLDSATLTPLLKRMEAQGLVTRERAASDERQVVISLTAEGDTLREKAVELPR Sbjct: 61 VSEIGERLVLDSATLTPLLKRMEAQGLVTRERAASDERQVVISLTAEGDTLREKAVELPR 120 Query: 121 EVLRATESTAAELAAIKEELMQLRARLHKNTGD 153 EVLRATESTAAELAAIKEELMQLRARLHKNTGD Sbjct: 121 EVLRATESTAAELAAIKEELMQLRARLHKNTGD 153 >ref|YP_001354616.1| MarR family transcriptional regulator [Janthinobacterium sp. Marseille] gb|ABR90503.1| transcriptional regulator, MarR family [Janthinobacterium sp. Marseille] Length = 163 Score = 197 bits (502), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 101/147 (68%), Positives = 121/147 (82%) Query: 1 MVSKTDKRKAAPLLDAQLCFALYSTSLSMSKLYRKLLRDLGITYSQYLVLMVLWEQDQLT 60 M SK+ K AP LD QLCFALYSTSL+MSK+YRKLL LG+TYSQYLV+MVLWEQD+LT Sbjct: 13 MKSKSTKPDNAPRLDNQLCFALYSTSLAMSKVYRKLLPRLGLTYSQYLVMMVLWEQDELT 72 Query: 61 VSEIGERLVLDSATLTPLLKRMEAQGLVTRERAASDERQVVISLTAEGDTLREKAVELPR 120 VS+IGERL LDSATLTPLLKRMEA L+TR RAA+DERQV+I+LT GD LR KA+E+ Sbjct: 73 VSDIGERLFLDSATLTPLLKRMEAAELITRVRAANDERQVIITLTKSGDALRSKALEMQG 132 Query: 121 EVLRATESTAAELAAIKEELMQLRARL 147 EVL AT + E+ A+KE+L+ LR++L Sbjct: 133 EVLCATACSLDEVVAMKEQLVTLRSKL 159 >ref|YP_001631798.1| MarR family transcriptional regulator [Bordetella petrii DSM 12804] emb|CAP43530.1| transcriptional regulator, MarR family [Bordetella petrii] Length = 157 Score = 184 bits (467), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 92/138 (66%), Positives = 111/138 (80%) Query: 13 LLDAQLCFALYSTSLSMSKLYRKLLRDLGITYSQYLVLMVLWEQDQLTVSEIGERLVLDS 72 LLD QLCFAL+ST+L+M+K+YRKLLR LG+TY QYLV+MVLWEQDQLT+S+IG +L LDS Sbjct: 19 LLDEQLCFALHSTTLAMNKVYRKLLRSLGLTYPQYLVMMVLWEQDQLTLSDIGRKLFLDS 78 Query: 73 ATLTPLLKRMEAQGLVTRERAASDERQVVISLTAEGDTLREKAVELPREVLRATESTAAE 132 ATLTPLLKRMEA GLVTR RA DERQV++SLT G L++KA ++P VL ATE + Sbjct: 79 ATLTPLLKRMEAAGLVTRLRAEQDERQVIVSLTRAGRDLKQKAAQVPVSVLCATECAPDD 138 Query: 133 LAAIKEELMQLRARLHKN 150 LAA+K +L LR RL N Sbjct: 139 LAALKAQLDHLRGRLMAN 156 >emb|CBJ40785.1| Organic hydroperoxide resistance transcriptional regulator, MarR family [Ralstonia solanacearum CMR15] Length = 153 Score = 174 bits (441), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 83/137 (60%), Positives = 108/137 (78%) Query: 14 LDAQLCFALYSTSLSMSKLYRKLLRDLGITYSQYLVLMVLWEQDQLTVSEIGERLVLDSA 73 LD QLCFALYST + ++K+YR LL+ LG+TY QYLV++VLWE+D LTVSEIGERL LDS Sbjct: 15 LDQQLCFALYSTMIGLNKVYRGLLKPLGLTYPQYLVMLVLWERDALTVSEIGERLFLDSP 74 Query: 74 TLTPLLKRMEAQGLVTRERAASDERQVVISLTAEGDTLREKAVELPREVLRATESTAAEL 133 TLTP+LKR+EA GL+ R+R+ +DERQV++SLTAEG L+ +A ++P V A E AEL Sbjct: 75 TLTPMLKRLEAAGLIARQRSDADERQVIVSLTAEGQRLKHRAKDVPGCVAAAMECVPAEL 134 Query: 134 AAIKEELMQLRARLHKN 150 A++ +L +RARL KN Sbjct: 135 EALRTQLTGMRARLFKN 151 >ref|YP_004210840.1| MarR family transcriptional regulator [Rahnella sp. Y9602] gb|ADW71713.1| transcriptional regulator, MarR family [Rahnella sp. Y9602] Length = 152 Score = 173 bits (439), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 83/135 (61%), Positives = 110/135 (81%) Query: 14 LDAQLCFALYSTSLSMSKLYRKLLRDLGITYSQYLVLMVLWEQDQLTVSEIGERLVLDSA 73 LD Q+CFALYS +L++ K+YRKLL +LG+TY QYLV++VLW++D++TVSEIGE+L LDSA Sbjct: 15 LDQQMCFALYSANLALHKVYRKLLGELGLTYPQYLVMLVLWQRDEVTVSEIGEKLFLDSA 74 Query: 74 TLTPLLKRMEAQGLVTRERAASDERQVVISLTAEGDTLREKAVELPREVLRATESTAAEL 133 TLTPLLKR+EA GL+ R+RA +DERQV+ISLT G LREKA ++P ++ ATE EL Sbjct: 75 TLTPLLKRLEAAGLLVRQRAKADERQVIISLTDAGKALREKAQDIPEAIVCATECDIGEL 134 Query: 134 AAIKEELMQLRARLH 148 A+K++L LRA+L Sbjct: 135 VALKQQLEVLRAKLQ 149 >ref|YP_786960.1| MarR family transcriptional regulator [Bordetella avium 197N] emb|CAJ50057.1| MarR-family transcriptional regulator [Bordetella avium 197N] Length = 156 Score = 172 bits (437), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 86/144 (59%), Positives = 108/144 (75%) Query: 1 MVSKTDKRKAAPLLDAQLCFALYSTSLSMSKLYRKLLRDLGITYSQYLVLMVLWEQDQLT 60 M +KT PLLD QLCFAL+STSL+MSK+YRKLL LG+TYSQYLV+MVLWEQD L Sbjct: 4 MKTKTSHSSRGPLLDKQLCFALHSTSLAMSKVYRKLLGPLGLTYSQYLVMMVLWEQDGLI 63 Query: 61 VSEIGERLVLDSATLTPLLKRMEAQGLVTRERAASDERQVVISLTAEGDTLREKAVELPR 120 +S+IG RL LDSATLTPLLKRME GL+ R+R SDERQV++SLT G L+E+A +P+ Sbjct: 64 LSDIGRRLFLDSATLTPLLKRMEGAGLLLRQRDPSDERQVIVSLTPRGRALQEQAQSVPQ 123 Query: 121 EVLRATESTAAELAAIKEELMQLR 144 + RA ++ E+ +K L +LR Sbjct: 124 GIARAAACSSEEVELLKAHLERLR 147 >ref|NP_522667.1| putative transcription regulator protein [Ralstonia solanacearum GMI1000] emb|CAD18257.1| putative transcription regulator protein [Ralstonia solanacearum GMI1000] Length = 153 Score = 172 bits (436), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 87/150 (58%), Positives = 113/150 (75%), Gaps = 5/150 (3%) Query: 6 DKRK-AAPL----LDAQLCFALYSTSLSMSKLYRKLLRDLGITYSQYLVLMVLWEQDQLT 60 D RK A+P LD QLCFALYST + ++K+YR LL+ LG+TY QYLV++VLWE+D LT Sbjct: 2 DTRKTASPYPNLALDQQLCFALYSTMIGLNKVYRGLLKPLGLTYPQYLVMLVLWERDALT 61 Query: 61 VSEIGERLVLDSATLTPLLKRMEAQGLVTRERAASDERQVVISLTAEGDTLREKAVELPR 120 VSEIGERL LDS TLTP+LKR+EA GL+ R+R+ +DERQV++SLTAEG L+ +A ++P Sbjct: 62 VSEIGERLFLDSPTLTPMLKRLEAAGLIGRQRSDADERQVIVSLTAEGQRLKHRAKDVPG 121 Query: 121 EVLRATESTAAELAAIKEELMQLRARLHKN 150 V A E AEL A++ +L +R RL KN Sbjct: 122 CVAAAMECVPAELEALRTQLTGMRTRLFKN 151 >ref|YP_003518413.1| OhrR [Pantoea ananatis LMG 20103] gb|ADD75285.1| OhrR [Pantoea ananatis LMG 20103] dbj|BAK13360.1| organic hydroperoxide resistance transcriptional regulator OhrR [Pantoea ananatis AJ13355] Length = 154 Score = 172 bits (435), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 87/147 (59%), Positives = 115/147 (78%), Gaps = 2/147 (1%) Query: 3 SKTDKR-KAAPLL-DAQLCFALYSTSLSMSKLYRKLLRDLGITYSQYLVLMVLWEQDQLT 60 ++ DK+ KAAPLL D QLCFALYS +L+M K+YRKLL + ITY QYLV++VLW+QD LT Sbjct: 4 NQNDKKVKAAPLLLDQQLCFALYSANLAMHKVYRKLLTQMDITYPQYLVMLVLWQQDSLT 63 Query: 61 VSEIGERLVLDSATLTPLLKRMEAQGLVTRERAASDERQVVISLTAEGDTLREKAVELPR 120 VSEIGERL LDSATLTPLLKR+E GL+ R+R+ DERQVV+SLT G +LR++A +P Sbjct: 64 VSEIGERLFLDSATLTPLLKRLENAGLLNRQRSRQDERQVVVSLTDAGRSLRQQAESIPD 123 Query: 121 EVLRATESTAAELAAIKEELMQLRARL 147 E+ A++ + E+ ++K +L QLR +L Sbjct: 124 EIQCASDCSEDEMNSLKLQLNQLRDKL 150 >ref|YP_003748421.1| organic hydroperoxide resistance transcriptional regulator, MarR family [Ralstonia solanacearum CFBP2957] emb|CBJ54034.1| Organic hydroperoxide resistance transcriptional regulator, MarR family [Ralstonia solanacearum CFBP2957] Length = 156 Score = 171 bits (433), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 83/137 (60%), Positives = 107/137 (78%) Query: 14 LDAQLCFALYSTSLSMSKLYRKLLRDLGITYSQYLVLMVLWEQDQLTVSEIGERLVLDSA 73 LD QLCFALYST + ++K+YR LL+ LG+TY QYLV++VLWE D LTVSEIGERL LDS Sbjct: 18 LDQQLCFALYSTMIGLNKVYRGLLKPLGLTYPQYLVMLVLWEGDALTVSEIGERLFLDSP 77 Query: 74 TLTPLLKRMEAQGLVTRERAASDERQVVISLTAEGDTLREKAVELPREVLRATESTAAEL 133 TLTP+LKR+EA GL+ R+R+ +DERQV++SLTAEG L+ +A ++P V A E AEL Sbjct: 78 TLTPMLKRLEAAGLLERQRSDADERQVIVSLTAEGKRLKHRAKDVPGCVGAAMECVPAEL 137 Query: 134 AAIKEELMQLRARLHKN 150 A++ +L +RARL KN Sbjct: 138 EALRTQLTGMRARLFKN 154 >ref|YP_001909308.1| transcriptional regulator of organic hydroperoxide resistance [Erwinia tasmaniensis Et1/99] emb|CAO98448.1| Transcriptional regulator of organic hydroperoxide resistance [Erwinia tasmaniensis Et1/99] Length = 153 Score = 171 bits (433), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 89/151 (58%), Positives = 111/151 (73%), Gaps = 3/151 (1%) Query: 1 MVSKTDKR--KAAPLL-DAQLCFALYSTSLSMSKLYRKLLRDLGITYSQYLVLMVLWEQD 57 M K DK+ A PLL D QLCFALYS +L++ KLYR+LL LGITY QYLV+MVLWEQD Sbjct: 2 MTDKDDKKASDALPLLLDQQLCFALYSANLALHKLYRQLLAPLGITYPQYLVMMVLWEQD 61 Query: 58 QLTVSEIGERLVLDSATLTPLLKRMEAQGLVTRERAASDERQVVISLTAEGDTLREKAVE 117 +TVSE+G RL LDSATLTPLLKR+E GL+ R R+ DERQVV++LT +G LRE+A++ Sbjct: 62 DVTVSEVGTRLYLDSATLTPLLKRLETAGLLNRHRSRKDERQVVVTLTEQGSALREQALD 121 Query: 118 LPREVLRATESTAAELAAIKEELMQLRARLH 148 LP V RA+ +L ++K EL LR L+ Sbjct: 122 LPASVCRASACELTQLQSLKSELEMLRDNLN 152