BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0028.p (662 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775253.1| DNA topoisomerase IV subunit B [Herbaspirill... 1350 0.0 ref|YP_001352397.1| DNA topoisomerase IV subunit B [Janthinobact... 1218 0.0 ref|ZP_08275558.1| Topoisomerase IV subunit B [Oxalobacteraceae ... 1212 0.0 ref|YP_001099110.1| DNA topoisomerase IV subunit B [Herminiimona... 1202 0.0 ref|YP_004753185.1| Topoisomerase type IIAb [Collimonas fungivor... 1194 0.0 ref|YP_001898411.1| DNA topoisomerase IV subunit B [Ralstonia pi... 1118 0.0 ref|ZP_07675833.1| DNA topoisomerase IV, B subunit [Ralstonia sp... 1117 0.0 ref|YP_002980873.1| DNA topoisomerase IV subunit B [Ralstonia pi... 1116 0.0 emb|CCA85879.1| DNA topoisomerase IV, subunit B [Ralstonia syzyg... 1114 0.0 ref|YP_003753056.1| DNA topoisomerase IV, subunit B [Ralstonia s... 1110 0.0 >ref|YP_003775253.1| DNA topoisomerase IV subunit B [Herbaspirillum seropedicae SmR1] gb|ADJ63345.1| DNA topoisomerase IV subunit B protein [Herbaspirillum seropedicae SmR1] Length = 662 Score = 1350 bits (3494), Expect = 0.0, Method: Compositional matrix adjust. Identities = 662/662 (100%), Positives = 662/662 (100%) Query: 1 MATKKTSPSDYSESSIRVLKGLEPVKQRPGMYTRTENPLHILQEVIDNASDEALGGYGKS 60 MATKKTSPSDYSESSIRVLKGLEPVKQRPGMYTRTENPLHILQEVIDNASDEALGGYGKS Sbjct: 1 MATKKTSPSDYSESSIRVLKGLEPVKQRPGMYTRTENPLHILQEVIDNASDEALGGYGKS 60 Query: 61 IIVTMNADGSVSVEDDGRGIPVGLHPEEKVPTVEIVFTRLHAGGKFDKGSGGAYAFSGGL 120 IIVTMNADGSVSVEDDGRGIPVGLHPEEKVPTVEIVFTRLHAGGKFDKGSGGAYAFSGGL Sbjct: 61 IIVTMNADGSVSVEDDGRGIPVGLHPEEKVPTVEIVFTRLHAGGKFDKGSGGAYAFSGGL 120 Query: 121 HGVGVSVTNALATRLEITVWREGGVHTLAFSGGDVIEKLKSRPATRDDKKSGTRVTVWPD 180 HGVGVSVTNALATRLEITVWREGGVHTLAFSGGDVIEKLKSRPATRDDKKSGTRVTVWPD Sbjct: 121 HGVGVSVTNALATRLEITVWREGGVHTLAFSGGDVIEKLKSRPATRDDKKSGTRVTVWPD 180 Query: 181 AKYFDSPTIPMGELQRLLRSKAVLLPGVKVTLTNGKTGDSQSWQYDQGLRGYLMEQLAQT 240 AKYFDSPTIPMGELQRLLRSKAVLLPGVKVTLTNGKTGDSQSWQYDQGLRGYLMEQLAQT Sbjct: 181 AKYFDSPTIPMGELQRLLRSKAVLLPGVKVTLTNGKTGDSQSWQYDQGLRGYLMEQLAQT 240 Query: 241 GSGETLIPLFEGEQFAGKDADGFAEGEGASWVVAWTEEGAVVRESYVNLIPTSNGGTHES 300 GSGETLIPLFEGEQFAGKDADGFAEGEGASWVVAWTEEGAVVRESYVNLIPTSNGGTHES Sbjct: 241 GSGETLIPLFEGEQFAGKDADGFAEGEGASWVVAWTEEGAVVRESYVNLIPTSNGGTHES 300 Query: 301 GLREGLFSAVKSFAEMHSLLPKGVKLLAEDVFARVSFVLSAKVLDPQFQGQIKERLNSRD 360 GLREGLFSAVKSFAEMHSLLPKGVKLLAEDVFARVSFVLSAKVLDPQFQGQIKERLNSRD Sbjct: 301 GLREGLFSAVKSFAEMHSLLPKGVKLLAEDVFARVSFVLSAKVLDPQFQGQIKERLNSRD 360 Query: 361 AVRLVAGFSRPALELWLNQHVDYGKKLAELVIKQAQSRLRSAQKVEKKKSSGVAVLPGKL 420 AVRLVAGFSRPALELWLNQHVDYGKKLAELVIKQAQSRLRSAQKVEKKKSSGVAVLPGKL Sbjct: 361 AVRLVAGFSRPALELWLNQHVDYGKKLAELVIKQAQSRLRSAQKVEKKKSSGVAVLPGKL 420 Query: 421 TDCESSDVSRNELFLVEGDSAGGSAKMGRDKEFQAILPLRGKVLNAWETERDRLFANNEI 480 TDCESSDVSRNELFLVEGDSAGGSAKMGRDKEFQAILPLRGKVLNAWETERDRLFANNEI Sbjct: 421 TDCESSDVSRNELFLVEGDSAGGSAKMGRDKEFQAILPLRGKVLNAWETERDRLFANNEI 480 Query: 481 HDIAVAIGVDPHGINDTPDLSGLRYGKICILSDADVDGSHIQVLLLTLFFRHFPKLIENG 540 HDIAVAIGVDPHGINDTPDLSGLRYGKICILSDADVDGSHIQVLLLTLFFRHFPKLIENG Sbjct: 481 HDIAVAIGVDPHGINDTPDLSGLRYGKICILSDADVDGSHIQVLLLTLFFRHFPKLIENG 540 Query: 541 NICVARPPLYRVDAPARGKKPVQKLYALDDGELEAIEDKLRKDGLKEGAWSISRFKGLGE 600 NICVARPPLYRVDAPARGKKPVQKLYALDDGELEAIEDKLRKDGLKEGAWSISRFKGLGE Sbjct: 541 NICVARPPLYRVDAPARGKKPVQKLYALDDGELEAIEDKLRKDGLKEGAWSISRFKGLGE 600 Query: 601 MNAEQLWETTMNPDTRRLLPISFGEPGVQTSEERFNMLMGKGEAASRRAWIEEHGNEAEA 660 MNAEQLWETTMNPDTRRLLPISFGEPGVQTSEERFNMLMGKGEAASRRAWIEEHGNEAEA Sbjct: 601 MNAEQLWETTMNPDTRRLLPISFGEPGVQTSEERFNMLMGKGEAASRRAWIEEHGNEAEA 660 Query: 661 DI 662 DI Sbjct: 661 DI 662 >ref|YP_001352397.1| DNA topoisomerase IV subunit B [Janthinobacterium sp. Marseille] gb|ABR88745.1| topoisomerase IV subunit B [Janthinobacterium sp. Marseille] Length = 661 Score = 1218 bits (3152), Expect = 0.0, Method: Compositional matrix adjust. Identities = 587/662 (88%), Positives = 627/662 (94%), Gaps = 1/662 (0%) Query: 1 MATKKTSPSDYSESSIRVLKGLEPVKQRPGMYTRTENPLHILQEVIDNASDEALGGYGKS 60 MATKK+S +DYSESSIRVLKGLEPVKQRPGMYTRTENPLHI+QEVIDNASDEALGGY K+ Sbjct: 1 MATKKSS-ADYSESSIRVLKGLEPVKQRPGMYTRTENPLHIIQEVIDNASDEALGGYCKN 59 Query: 61 IIVTMNADGSVSVEDDGRGIPVGLHPEEKVPTVEIVFTRLHAGGKFDKGSGGAYAFSGGL 120 I+VT+N DGSVSVEDDGRGIPVGLHPEEKVPTVEIVFTRLHAGGKFDKGSGGAYAFSGGL Sbjct: 60 IVVTLNTDGSVSVEDDGRGIPVGLHPEEKVPTVEIVFTRLHAGGKFDKGSGGAYAFSGGL 119 Query: 121 HGVGVSVTNALATRLEITVWREGGVHTLAFSGGDVIEKLKSRPATRDDKKSGTRVTVWPD 180 HGVGVSVTNAL+TRLEITVWRE GVH+LAF+GGDV+E LKSRP TRD+K+SGTRVT WPD Sbjct: 120 HGVGVSVTNALSTRLEITVWRENGVHSLAFAGGDVVEPLKSRPLTRDEKRSGTRVTAWPD 179 Query: 181 AKYFDSPTIPMGELQRLLRSKAVLLPGVKVTLTNGKTGDSQSWQYDQGLRGYLMEQLAQT 240 AKYFDS IP ELQRLLRSKAVLLPGVKVTL + K+G++Q+WQYDQGLRGYL E LAQ Sbjct: 180 AKYFDSSVIPQAELQRLLRSKAVLLPGVKVTLVHAKSGETQTWQYDQGLRGYLTESLAQA 239 Query: 241 GSGETLIPLFEGEQFAGKDADGFAEGEGASWVVAWTEEGAVVRESYVNLIPTSNGGTHES 300 + ETLIPLFEGEQ+AG DA+GFAEGEGA+WVVAWTE+GAVVRESYVNLIPTSNGGTHES Sbjct: 240 SNSETLIPLFEGEQYAGADAEGFAEGEGAAWVVAWTEDGAVVRESYVNLIPTSNGGTHES 299 Query: 301 GLREGLFSAVKSFAEMHSLLPKGVKLLAEDVFARVSFVLSAKVLDPQFQGQIKERLNSRD 360 GLREGLF AVKSF EMHSLLPKGVKLL EDVFARVSFVLSAKVLDPQFQGQIKERLNSRD Sbjct: 300 GLREGLFGAVKSFVEMHSLLPKGVKLLPEDVFARVSFVLSAKVLDPQFQGQIKERLNSRD 359 Query: 361 AVRLVAGFSRPALELWLNQHVDYGKKLAELVIKQAQSRLRSAQKVEKKKSSGVAVLPGKL 420 AVRLVA F+RP+LELWLNQHV+YGKKLAELVIKQAQSRLRSAQKVEKKKSSGVAVLPGKL Sbjct: 360 AVRLVASFTRPSLELWLNQHVEYGKKLAELVIKQAQSRLRSAQKVEKKKSSGVAVLPGKL 419 Query: 421 TDCESSDVSRNELFLVEGDSAGGSAKMGRDKEFQAILPLRGKVLNAWETERDRLFANNEI 480 TDCES+D+SRNELFLVEGDSAGGSAKMGRDKEFQAILPLRGKVLN+WETERDRLFANNEI Sbjct: 420 TDCESTDISRNELFLVEGDSAGGSAKMGRDKEFQAILPLRGKVLNSWETERDRLFANNEI 479 Query: 481 HDIAVAIGVDPHGINDTPDLSGLRYGKICILSDADVDGSHIQVLLLTLFFRHFPKLIENG 540 HDIAVAIGVDPHG NDT DLS LRYG+ICILSDADVDGSHIQVLLLTLFF+HFP+LI+ G Sbjct: 480 HDIAVAIGVDPHGKNDTVDLSNLRYGRICILSDADVDGSHIQVLLLTLFFKHFPQLIDRG 539 Query: 541 NICVARPPLYRVDAPARGKKPVQKLYALDDGELEAIEDKLRKDGLKEGAWSISRFKGLGE 600 +IC+ARPPLYRVDAPARGKKPVQK+YALDDGELEAIEDKLRKDG+KE AW+ISRFKGLGE Sbjct: 540 HICIARPPLYRVDAPARGKKPVQKIYALDDGELEAIEDKLRKDGVKENAWTISRFKGLGE 599 Query: 601 MNAEQLWETTMNPDTRRLLPISFGEPGVQTSEERFNMLMGKGEAASRRAWIEEHGNEAEA 660 MNAEQLWETTMNPDTRRLLP+S GE + SE RFNMLMGKGEAA+RR WIEEHGNEAEA Sbjct: 600 MNAEQLWETTMNPDTRRLLPVSLGEFDLDFSEARFNMLMGKGEAAARRTWIEEHGNEAEA 659 Query: 661 DI 662 DI Sbjct: 660 DI 661 >ref|ZP_08275558.1| Topoisomerase IV subunit B [Oxalobacteraceae bacterium IMCC9480] gb|EGF30975.1| Topoisomerase IV subunit B [Oxalobacteraceae bacterium IMCC9480] Length = 662 Score = 1212 bits (3136), Expect = 0.0, Method: Compositional matrix adjust. Identities = 582/662 (87%), Positives = 628/662 (94%) Query: 1 MATKKTSPSDYSESSIRVLKGLEPVKQRPGMYTRTENPLHILQEVIDNASDEALGGYGKS 60 MATKKT+PSDYSESSIRVLKGLEPVKQRPGMYTRTENPLHI+QEVIDNASDEALGGY K Sbjct: 1 MATKKTAPSDYSESSIRVLKGLEPVKQRPGMYTRTENPLHIIQEVIDNASDEALGGYCKH 60 Query: 61 IIVTMNADGSVSVEDDGRGIPVGLHPEEKVPTVEIVFTRLHAGGKFDKGSGGAYAFSGGL 120 I VT NADGSV+V+DDGRGIPVG+HPEE VPTVEIVFTRLHAGGKFDKGSGGAYAFSGGL Sbjct: 61 ITVTQNADGSVTVDDDGRGIPVGIHPEEGVPTVEIVFTRLHAGGKFDKGSGGAYAFSGGL 120 Query: 121 HGVGVSVTNALATRLEITVWREGGVHTLAFSGGDVIEKLKSRPATRDDKKSGTRVTVWPD 180 HGVGVSVTNAL+TRLEITVWREGGVH+LAF+ GD+IEK+ +RP TRDDKKSGTRVT WPD Sbjct: 121 HGVGVSVTNALSTRLEITVWREGGVHSLAFASGDLIEKISTRPITRDDKKSGTRVTAWPD 180 Query: 181 AKYFDSPTIPMGELQRLLRSKAVLLPGVKVTLTNGKTGDSQSWQYDQGLRGYLMEQLAQT 240 KYFDSP I ELQRLLRSKAVLLPGVKVTL NGKTG+SQ+WQY+QGLRGYL+E LAQ Sbjct: 181 PKYFDSPAISQSELQRLLRSKAVLLPGVKVTLVNGKTGESQTWQYEQGLRGYLVECLAQA 240 Query: 241 GSGETLIPLFEGEQFAGKDADGFAEGEGASWVVAWTEEGAVVRESYVNLIPTSNGGTHES 300 S + LIPLFEGEQ+AGKDA+GFAEGEGA+WVVAWTE+G VVRESYVNLIPTS GGTHES Sbjct: 241 TSSDPLIPLFEGEQYAGKDAEGFAEGEGAAWVVAWTEDGGVVRESYVNLIPTSAGGTHES 300 Query: 301 GLREGLFSAVKSFAEMHSLLPKGVKLLAEDVFARVSFVLSAKVLDPQFQGQIKERLNSRD 360 GLREGLF AVKSFAEMHSLLPKGVKLL+EDVFARVSFVLSAKVLDPQFQGQIKERLNSRD Sbjct: 301 GLREGLFGAVKSFAEMHSLLPKGVKLLSEDVFARVSFVLSAKVLDPQFQGQIKERLNSRD 360 Query: 361 AVRLVAGFSRPALELWLNQHVDYGKKLAELVIKQAQSRLRSAQKVEKKKSSGVAVLPGKL 420 AV+LV+ F RP+LELWL++HV+YGKKLA+LVIKQAQSRLRS+QKVEKKKSSGVAVLPGKL Sbjct: 361 AVKLVSTFVRPSLELWLSEHVEYGKKLADLVIKQAQSRLRSSQKVEKKKSSGVAVLPGKL 420 Query: 421 TDCESSDVSRNELFLVEGDSAGGSAKMGRDKEFQAILPLRGKVLNAWETERDRLFANNEI 480 TDCES+D+ RNE+FLVEGDSAGGSAKMGRDKEFQAILPLRGKVLNAWETERDRLFANNEI Sbjct: 421 TDCESNDIKRNEIFLVEGDSAGGSAKMGRDKEFQAILPLRGKVLNAWETERDRLFANNEI 480 Query: 481 HDIAVAIGVDPHGINDTPDLSGLRYGKICILSDADVDGSHIQVLLLTLFFRHFPKLIENG 540 HDIAVAIGVDPHG NDTPDLS LRYG+ICILSDADVDGSHIQVLLLTLFF+HFPKLI++G Sbjct: 481 HDIAVAIGVDPHGKNDTPDLSNLRYGRICILSDADVDGSHIQVLLLTLFFKHFPKLIDHG 540 Query: 541 NICVARPPLYRVDAPARGKKPVQKLYALDDGELEAIEDKLRKDGLKEGAWSISRFKGLGE 600 +IC+ARPPL+RVDAPARGKKP QK+YALD GEL AIEDKLRKDG+KEGAWSISRFKGLGE Sbjct: 541 HICIARPPLFRVDAPARGKKPAQKIYALDSGELVAIEDKLRKDGVKEGAWSISRFKGLGE 600 Query: 601 MNAEQLWETTMNPDTRRLLPISFGEPGVQTSEERFNMLMGKGEAASRRAWIEEHGNEAEA 660 MNAEQLWETTMNPDTRRLLP++FGE + +SEERFNMLMGKGEAA+RRAWIEEHGNEAEA Sbjct: 601 MNAEQLWETTMNPDTRRLLPVAFGEFDLVSSEERFNMLMGKGEAAARRAWIEEHGNEAEA 660 Query: 661 DI 662 DI Sbjct: 661 DI 662 >ref|YP_001099110.1| DNA topoisomerase IV subunit B [Herminiimonas arsenicoxydans] emb|CAL60983.1| DNA topoisomerase 4 subunit B (Topoisomerase IV subunit B) [Herminiimonas arsenicoxydans] Length = 661 Score = 1202 bits (3110), Expect = 0.0, Method: Compositional matrix adjust. Identities = 578/662 (87%), Positives = 616/662 (93%), Gaps = 1/662 (0%) Query: 1 MATKKTSPSDYSESSIRVLKGLEPVKQRPGMYTRTENPLHILQEVIDNASDEALGGYGKS 60 MATKK+S +DYSESSIRVLKGLEPVKQRPGMYTRTENPLHI+QEVIDNASDEALGGY K Sbjct: 1 MATKKSS-ADYSESSIRVLKGLEPVKQRPGMYTRTENPLHIIQEVIDNASDEALGGYCKH 59 Query: 61 IIVTMNADGSVSVEDDGRGIPVGLHPEEKVPTVEIVFTRLHAGGKFDKGSGGAYAFSGGL 120 I+VT+N DGSVSVEDDGRGIPVGLHPEEK+PTVEIVFTRLHAGGKFDK SGGAYAFSGGL Sbjct: 60 IVVTLNTDGSVSVEDDGRGIPVGLHPEEKIPTVEIVFTRLHAGGKFDKSSGGAYAFSGGL 119 Query: 121 HGVGVSVTNALATRLEITVWREGGVHTLAFSGGDVIEKLKSRPATRDDKKSGTRVTVWPD 180 HGVGVSVTNAL+TRLEITVWRE GVHTL FSGGDVIE LKSR RD+K+SGTRVT WPD Sbjct: 120 HGVGVSVTNALSTRLEITVWRESGVHTLTFSGGDVIEPLKSRAIARDEKRSGTRVTAWPD 179 Query: 181 AKYFDSPTIPMGELQRLLRSKAVLLPGVKVTLTNGKTGDSQSWQYDQGLRGYLMEQLAQT 240 KYFDS IP ELQRLLRSKAVLLPGVKVTL + K+G++Q+WQYDQGLRGYL E LAQ Sbjct: 180 PKYFDSSVIPQAELQRLLRSKAVLLPGVKVTLVHAKSGETQTWQYDQGLRGYLTESLAQA 239 Query: 241 GSGETLIPLFEGEQFAGKDADGFAEGEGASWVVAWTEEGAVVRESYVNLIPTSNGGTHES 300 + ET+IPLFEGEQ+A D +GFAEGEGA+WVVAWTE+GAVVRESYVNLIPTSNGGTHES Sbjct: 240 SNAETVIPLFEGEQYANADTEGFAEGEGAAWVVAWTEDGAVVRESYVNLIPTSNGGTHES 299 Query: 301 GLREGLFSAVKSFAEMHSLLPKGVKLLAEDVFARVSFVLSAKVLDPQFQGQIKERLNSRD 360 GLREGLF AVKSF EMHSLLPKGVKLL EDVFARVSFVLSAKVLDPQFQGQIKERLNSRD Sbjct: 300 GLREGLFGAVKSFVEMHSLLPKGVKLLPEDVFARVSFVLSAKVLDPQFQGQIKERLNSRD 359 Query: 361 AVRLVAGFSRPALELWLNQHVDYGKKLAELVIKQAQSRLRSAQKVEKKKSSGVAVLPGKL 420 AVRLVA ++RPALELWLNQHVDYGKKLAELVIKQAQSRLRSAQKVEKKKSSGVAVLPGKL Sbjct: 360 AVRLVATYTRPALELWLNQHVDYGKKLAELVIKQAQSRLRSAQKVEKKKSSGVAVLPGKL 419 Query: 421 TDCESSDVSRNELFLVEGDSAGGSAKMGRDKEFQAILPLRGKVLNAWETERDRLFANNEI 480 TDCESSD SRNE+FLVEGDSAGGSAKMGRDKEFQAILPLRGKVLN+WETERDRLFANNEI Sbjct: 420 TDCESSDTSRNEIFLVEGDSAGGSAKMGRDKEFQAILPLRGKVLNSWETERDRLFANNEI 479 Query: 481 HDIAVAIGVDPHGINDTPDLSGLRYGKICILSDADVDGSHIQVLLLTLFFRHFPKLIENG 540 HDIAVAIG+DPHG NDT D S LRYG+ICILSDADVDGSHIQVLLLTLFF+HFP+LIE G Sbjct: 480 HDIAVAIGIDPHGKNDTVDFSSLRYGRICILSDADVDGSHIQVLLLTLFFKHFPQLIERG 539 Query: 541 NICVARPPLYRVDAPARGKKPVQKLYALDDGELEAIEDKLRKDGLKEGAWSISRFKGLGE 600 +IC+ARPPLYRVDAPARGKKP+QK+YALDDGEL AIEDKLRKDG+KE AW+ISRFKGLGE Sbjct: 540 HICIARPPLYRVDAPARGKKPIQKIYALDDGELAAIEDKLRKDGVKESAWAISRFKGLGE 599 Query: 601 MNAEQLWETTMNPDTRRLLPISFGEPGVQTSEERFNMLMGKGEAASRRAWIEEHGNEAEA 660 MNAEQLWETTMNPDTRRLLP++ GE + SE RFNMLMGKGEAA+RR WIEEHGNEAEA Sbjct: 600 MNAEQLWETTMNPDTRRLLPVALGEFDLDFSEARFNMLMGKGEAAARRTWIEEHGNEAEA 659 Query: 661 DI 662 DI Sbjct: 660 DI 661 >ref|YP_004753185.1| Topoisomerase type IIAb [Collimonas fungivorans Ter331] gb|AEK62362.1| Topoisomerase type IIAb [Collimonas fungivorans Ter331] Length = 663 Score = 1194 bits (3088), Expect = 0.0, Method: Compositional matrix adjust. Identities = 577/663 (87%), Positives = 618/663 (93%), Gaps = 1/663 (0%) Query: 1 MATKKTSPSDYSESSIRVLKGLEPVKQRPGMYTRTENPLHILQEVIDNASDEALGGYGKS 60 MATKK+ SDYSESSIRVLKGLEPVKQRPGMYTRTENPLHI+QEVIDNASDEALGG+ K+ Sbjct: 1 MATKKSPQSDYSESSIRVLKGLEPVKQRPGMYTRTENPLHIIQEVIDNASDEALGGFCKN 60 Query: 61 IIVTMNADGSVSVEDDGRGIPVGLHPEEKVPTVEIVFTRLHAGGKFDKGSGGAYAFSGGL 120 I+VT+N DGSVSVEDDGRGIPVG+HPEEKVPTVEIVFTRLHAGGKFDKGSGGAY+FSGGL Sbjct: 61 ILVTLNTDGSVSVEDDGRGIPVGMHPEEKVPTVEIVFTRLHAGGKFDKGSGGAYSFSGGL 120 Query: 121 HGVGVSVTNALATRLEITVWREGGVHTLAFSGGDVIEKLKSRPATR-DDKKSGTRVTVWP 179 HGVGVSVTNAL++RLEITVWREGG H + F+ GDVIEKLKSR R D+KKSGTRVT WP Sbjct: 121 HGVGVSVTNALSSRLEITVWREGGEHHMVFADGDVIEKLKSRSLGREDNKKSGTRVTAWP 180 Query: 180 DAKYFDSPTIPMGELQRLLRSKAVLLPGVKVTLTNGKTGDSQSWQYDQGLRGYLMEQLAQ 239 + KYFDSP I ELQRLLRSKAVLLPGVKVTL N K+GDSQ+WQYDQGLRGYLME LAQ Sbjct: 181 NPKYFDSPAISQPELQRLLRSKAVLLPGVKVTLLNAKSGDSQTWQYDQGLRGYLMESLAQ 240 Query: 240 TGSGETLIPLFEGEQFAGKDADGFAEGEGASWVVAWTEEGAVVRESYVNLIPTSNGGTHE 299 + + E LIPLFEGEQ+A DA+GFAEGEGA+WVVAWTE+GA+VRESYVNLIPTS GGTHE Sbjct: 241 SSNAEPLIPLFEGEQYANADAEGFAEGEGAAWVVAWTEDGAIVRESYVNLIPTSAGGTHE 300 Query: 300 SGLREGLFSAVKSFAEMHSLLPKGVKLLAEDVFARVSFVLSAKVLDPQFQGQIKERLNSR 359 SGLREGLF AVKSF EMHSLLPKGVKLL EDVFARVSFVLSAKVLDPQFQGQIKERLNSR Sbjct: 301 SGLREGLFGAVKSFVEMHSLLPKGVKLLPEDVFARVSFVLSAKVLDPQFQGQIKERLNSR 360 Query: 360 DAVRLVAGFSRPALELWLNQHVDYGKKLAELVIKQAQSRLRSAQKVEKKKSSGVAVLPGK 419 DAVRLV+ ++RPALELWLNQHV+YGKKLA+LVIKQAQ+RLRSAQKVEKKKSSGVAVLPGK Sbjct: 361 DAVRLVSTYTRPALELWLNQHVEYGKKLADLVIKQAQNRLRSAQKVEKKKSSGVAVLPGK 420 Query: 420 LTDCESSDVSRNELFLVEGDSAGGSAKMGRDKEFQAILPLRGKVLNAWETERDRLFANNE 479 LTDCESSD+SRNELFLVEGDSAGGSAKMGRDKEFQAILPLRGKVLN+WETERDRLFANNE Sbjct: 421 LTDCESSDISRNELFLVEGDSAGGSAKMGRDKEFQAILPLRGKVLNSWETERDRLFANNE 480 Query: 480 IHDIAVAIGVDPHGINDTPDLSGLRYGKICILSDADVDGSHIQVLLLTLFFRHFPKLIEN 539 IHDIAVAIGVDPH DT D SGLRYGKICILSDADVDGSHIQVLLLTLFFRHFP+LI+ Sbjct: 481 IHDIAVAIGVDPHSKTDTIDFSGLRYGKICILSDADVDGSHIQVLLLTLFFRHFPQLIDR 540 Query: 540 GNICVARPPLYRVDAPARGKKPVQKLYALDDGELEAIEDKLRKDGLKEGAWSISRFKGLG 599 GNIC+ARPPLYRVDAPARGKKP QK+YALDDGELEAIEDKLRKDG+K+ AWSISRFKGLG Sbjct: 541 GNICIARPPLYRVDAPARGKKPAQKIYALDDGELEAIEDKLRKDGVKDSAWSISRFKGLG 600 Query: 600 EMNAEQLWETTMNPDTRRLLPISFGEPGVQTSEERFNMLMGKGEAASRRAWIEEHGNEAE 659 EMNAEQLWETTMNPDTRRLLP+S G ++ SE RFNMLMGKGEAA+RRAWIEEHGNEAE Sbjct: 601 EMNAEQLWETTMNPDTRRLLPVSLGNFDLEASENRFNMLMGKGEAAARRAWIEEHGNEAE 660 Query: 660 ADI 662 ADI Sbjct: 661 ADI 663 >ref|YP_001898411.1| DNA topoisomerase IV subunit B [Ralstonia pickettii 12J] gb|ACD25979.1| DNA topoisomerase (ATP-hydrolyzing) [Ralstonia pickettii 12J] Length = 661 Score = 1118 bits (2891), Expect = 0.0, Method: Compositional matrix adjust. Identities = 545/657 (82%), Positives = 588/657 (89%), Gaps = 3/657 (0%) Query: 9 SDYSESSIRVLKGLEPVKQRPGMYTRTENPLHILQEVIDNASDEALGGYGKSIIVTMNAD 68 S YSESSI+VLKGLEPVKQRPGMYTRT+NPLHI+QEVIDN++DEALGGYGK I VT++ D Sbjct: 5 SQYSESSIKVLKGLEPVKQRPGMYTRTDNPLHIVQEVIDNSADEALGGYGKLIAVTLHKD 64 Query: 69 GSVSVEDDGRGIPVGLHPEEKVPTVEIVFTRLHAGGKFDKGSGGAYAFSGGLHGVGVSVT 128 GSVSVEDD RGIPVG+HPEE VP VEIV+TRLHAGGKFDKG GGAYAFSGGLHGVGVSVT Sbjct: 65 GSVSVEDDARGIPVGIHPEEGVPVVEIVYTRLHAGGKFDKGRGGAYAFSGGLHGVGVSVT 124 Query: 129 NALATRLEITVWREGGVHTLAFSGGDVIEKLKSRPATRDDKKSGTRVTVWPDAKYFDSPT 188 NAL+TRLE+TVWR+G V TLAFSGGDVIE L +R A R +KKSGTRV WPDAKYFDS Sbjct: 125 NALSTRLEVTVWRDGNVSTLAFSGGDVIEPLTTRKAERGEKKSGTRVRAWPDAKYFDSEN 184 Query: 189 IPMGELQRLLRSKAVLLPGVKVTLTNGKTGDSQSWQYDQGLRGYLMEQLAQTGSGETLIP 248 IP ELQRLLRSKAVLLPGVKVTLT +TG++ WQYDQGLRGYL+E LAQ E +IP Sbjct: 185 IPQAELQRLLRSKAVLLPGVKVTLTLERTGETLEWQYDQGLRGYLVESLAQGSGAEPVIP 244 Query: 249 LFEGEQFAGKDA---DGFAEGEGASWVVAWTEEGAVVRESYVNLIPTSNGGTHESGLREG 305 LFEGE FA D +GFA GEGASWVVAWTEEG+ VRESYVNLIPT GGTHESGLREG Sbjct: 245 LFEGEHFADPDKPGEEGFAFGEGASWVVAWTEEGSPVRESYVNLIPTPAGGTHESGLREG 304 Query: 306 LFSAVKSFAEMHSLLPKGVKLLAEDVFARVSFVLSAKVLDPQFQGQIKERLNSRDAVRLV 365 LF AVKSF EMH+LLPKGVKL++EDVFAR SFVLSAKVLDPQFQGQIKERLNSRDAVRLV Sbjct: 305 LFQAVKSFVEMHALLPKGVKLMSEDVFARASFVLSAKVLDPQFQGQIKERLNSRDAVRLV 364 Query: 366 AGFSRPALELWLNQHVDYGKKLAELVIKQAQSRLRSAQKVEKKKSSGVAVLPGKLTDCES 425 + FSRPALELWLNQHV++GKKLAELVIKQAQ+R R+AQKVEKKK SGVAVLPGKLTDCES Sbjct: 365 STFSRPALELWLNQHVEHGKKLAELVIKQAQARTRAAQKVEKKKGSGVAVLPGKLTDCES 424 Query: 426 SDVSRNELFLVEGDSAGGSAKMGRDKEFQAILPLRGKVLNAWETERDRLFANNEIHDIAV 485 DV+RNELFLVEGDSAGGSAKMGRDKEFQAILPLRGKVLN WETERDRLFANNE+HDIAV Sbjct: 425 DDVTRNELFLVEGDSAGGSAKMGRDKEFQAILPLRGKVLNTWETERDRLFANNEVHDIAV 484 Query: 486 AIGVDPHGINDTPDLSGLRYGKICILSDADVDGSHIQVLLLTLFFRHFPKLIENGNICVA 545 AIGVDPHG NDT DLSGLRYGKICILSDADVDG+HIQVLLLTLFF+HFP+LI+ GN+CVA Sbjct: 485 AIGVDPHGPNDTVDLSGLRYGKICILSDADVDGAHIQVLLLTLFFKHFPQLIDRGNVCVA 544 Query: 546 RPPLYRVDAPARGKKPVQKLYALDDGELEAIEDKLRKDGLKEGAWSISRFKGLGEMNAEQ 605 RPPLYRVDAPARGKKP QKLYALDDGELEAIEDKLRKDG+KEGAW ISRFKGLGEM+AEQ Sbjct: 545 RPPLYRVDAPARGKKPAQKLYALDDGELEAIEDKLRKDGVKEGAWQISRFKGLGEMSAEQ 604 Query: 606 LWETTMNPDTRRLLPISFGEPGVQTSEERFNMLMGKGEAASRRAWIEEHGNEAEADI 662 LWETTMNPDTRRLLP++ GE G + NMLMGKGEA +RR W+E GNE EADI Sbjct: 605 LWETTMNPDTRRLLPVALGELGQDQTINMMNMLMGKGEAGARRTWLEARGNEVEADI 661 >ref|ZP_07675833.1| DNA topoisomerase IV, B subunit [Ralstonia sp. 5_7_47FAA] gb|EFP65820.1| DNA topoisomerase IV, B subunit [Ralstonia sp. 5_7_47FAA] Length = 661 Score = 1117 bits (2889), Expect = 0.0, Method: Compositional matrix adjust. Identities = 545/657 (82%), Positives = 589/657 (89%), Gaps = 3/657 (0%) Query: 9 SDYSESSIRVLKGLEPVKQRPGMYTRTENPLHILQEVIDNASDEALGGYGKSIIVTMNAD 68 S YSESSI+VLKGLEPVKQRPGMYTRT+NPLHI+QEVIDN++DEALGGYGK I VT++ D Sbjct: 5 SQYSESSIKVLKGLEPVKQRPGMYTRTDNPLHIVQEVIDNSADEALGGYGKLIAVTLHRD 64 Query: 69 GSVSVEDDGRGIPVGLHPEEKVPTVEIVFTRLHAGGKFDKGSGGAYAFSGGLHGVGVSVT 128 GSVSVEDD RGIPVG+HPEE VP VEIV+TRLHAGGKFDKG GGAYAFSGGLHGVGVSVT Sbjct: 65 GSVSVEDDARGIPVGIHPEEGVPVVEIVYTRLHAGGKFDKGRGGAYAFSGGLHGVGVSVT 124 Query: 129 NALATRLEITVWREGGVHTLAFSGGDVIEKLKSRPATRDDKKSGTRVTVWPDAKYFDSPT 188 NAL+TRLE+TVWR+G V TLAFSGGDVIE L +R A R +KKSGTRV WPDAKYFDS Sbjct: 125 NALSTRLEVTVWRDGNVSTLAFSGGDVIEPLTTRKAERGEKKSGTRVRAWPDAKYFDSEN 184 Query: 189 IPMGELQRLLRSKAVLLPGVKVTLTNGKTGDSQSWQYDQGLRGYLMEQLAQTGSGETLIP 248 IP+ ELQRLLRSKAVLLPGVKVTLT KTG++ WQYDQGLRGYL+E LAQ E +IP Sbjct: 185 IPLAELQRLLRSKAVLLPGVKVTLTLEKTGETLEWQYDQGLRGYLVESLAQGSGAEPVIP 244 Query: 249 LFEGEQFAGKDA---DGFAEGEGASWVVAWTEEGAVVRESYVNLIPTSNGGTHESGLREG 305 LFEGE FA D +GFA GEGASWVVAWTEEG+ VRESYVNLIPT GGTHESGLREG Sbjct: 245 LFEGEHFADPDKPGEEGFAFGEGASWVVAWTEEGSPVRESYVNLIPTPAGGTHESGLREG 304 Query: 306 LFSAVKSFAEMHSLLPKGVKLLAEDVFARVSFVLSAKVLDPQFQGQIKERLNSRDAVRLV 365 LF AVKSF EMH+LLPKGVKL++EDVFAR SFVLSAKVLDPQFQGQIKERLNSRDAVRLV Sbjct: 305 LFQAVKSFVEMHALLPKGVKLMSEDVFARASFVLSAKVLDPQFQGQIKERLNSRDAVRLV 364 Query: 366 AGFSRPALELWLNQHVDYGKKLAELVIKQAQSRLRSAQKVEKKKSSGVAVLPGKLTDCES 425 + FSRPALELWLNQHVD+GKKLAELVIKQAQ+R R+AQKVEKKK SGVAVLPGKLTDCES Sbjct: 365 STFSRPALELWLNQHVDHGKKLAELVIKQAQARTRAAQKVEKKKGSGVAVLPGKLTDCES 424 Query: 426 SDVSRNELFLVEGDSAGGSAKMGRDKEFQAILPLRGKVLNAWETERDRLFANNEIHDIAV 485 DV+RNELFLVEGDSAGGSAKMGRDKEFQAILPLRGKVLN WETERDRLFANNE+HDIAV Sbjct: 425 DDVTRNELFLVEGDSAGGSAKMGRDKEFQAILPLRGKVLNTWETERDRLFANNEVHDIAV 484 Query: 486 AIGVDPHGINDTPDLSGLRYGKICILSDADVDGSHIQVLLLTLFFRHFPKLIENGNICVA 545 AIGVDPHG NDT DLSGLRYGKICILSDADVDG+HIQVLLLTLFF+HFP+LI+ G++CVA Sbjct: 485 AIGVDPHGPNDTVDLSGLRYGKICILSDADVDGAHIQVLLLTLFFKHFPQLIDRGHVCVA 544 Query: 546 RPPLYRVDAPARGKKPVQKLYALDDGELEAIEDKLRKDGLKEGAWSISRFKGLGEMNAEQ 605 RPPLYRVDAPARGKKP QKLYALDDGELEAIEDKLRKDG+K+GAW ISRFKGLGEM+AEQ Sbjct: 545 RPPLYRVDAPARGKKPAQKLYALDDGELEAIEDKLRKDGVKDGAWQISRFKGLGEMSAEQ 604 Query: 606 LWETTMNPDTRRLLPISFGEPGVQTSEERFNMLMGKGEAASRRAWIEEHGNEAEADI 662 LWETTMNPDTRRLLP++ GE G + NMLMGKGEA +RR W+E GNE EADI Sbjct: 605 LWETTMNPDTRRLLPVALGELGQDQTINMMNMLMGKGEAGARRTWLEARGNEVEADI 661 >ref|YP_002980873.1| DNA topoisomerase IV subunit B [Ralstonia pickettii 12D] gb|ACS62201.1| DNA topoisomerase (ATP-hydrolyzing) [Ralstonia pickettii 12D] Length = 661 Score = 1116 bits (2887), Expect = 0.0, Method: Compositional matrix adjust. Identities = 545/657 (82%), Positives = 586/657 (89%), Gaps = 3/657 (0%) Query: 9 SDYSESSIRVLKGLEPVKQRPGMYTRTENPLHILQEVIDNASDEALGGYGKSIIVTMNAD 68 S YSESSI+VLKGLEPVKQRPGMYTRT+NPLHI+QEVIDN++DEALGGYGK I VT++ D Sbjct: 5 SQYSESSIKVLKGLEPVKQRPGMYTRTDNPLHIVQEVIDNSADEALGGYGKLIAVTLHKD 64 Query: 69 GSVSVEDDGRGIPVGLHPEEKVPTVEIVFTRLHAGGKFDKGSGGAYAFSGGLHGVGVSVT 128 GSVSVEDD RGIPVG+HPEE VP VEIV+TRLHAGGKFDKG GGAYAFSGGLHGVGVSVT Sbjct: 65 GSVSVEDDARGIPVGIHPEEGVPVVEIVYTRLHAGGKFDKGRGGAYAFSGGLHGVGVSVT 124 Query: 129 NALATRLEITVWREGGVHTLAFSGGDVIEKLKSRPATRDDKKSGTRVTVWPDAKYFDSPT 188 NAL+ RLE+TVWR+G V TLAFSGGDVIE L +R A R +KKSGTRV WPDAKYFDS Sbjct: 125 NALSKRLEVTVWRDGNVSTLAFSGGDVIEPLTTRKAERGEKKSGTRVRAWPDAKYFDSEN 184 Query: 189 IPMGELQRLLRSKAVLLPGVKVTLTNGKTGDSQSWQYDQGLRGYLMEQLAQTGSGETLIP 248 IP ELQRLLRSKAVLLPGVKVTLT KTG++ WQYDQGLRGYL+E LAQ E +IP Sbjct: 185 IPQAELQRLLRSKAVLLPGVKVTLTLEKTGETLEWQYDQGLRGYLVESLAQGSGAEPVIP 244 Query: 249 LFEGEQFAGKDA---DGFAEGEGASWVVAWTEEGAVVRESYVNLIPTSNGGTHESGLREG 305 LFEGE FA D +GFA GEGASWVVAWTEEG+ VRESYVNLIPT GGTHESGLREG Sbjct: 245 LFEGEHFADPDKPGEEGFAFGEGASWVVAWTEEGSPVRESYVNLIPTPAGGTHESGLREG 304 Query: 306 LFSAVKSFAEMHSLLPKGVKLLAEDVFARVSFVLSAKVLDPQFQGQIKERLNSRDAVRLV 365 LF AVKSF EMH+LLPKGVKL++EDVFAR SFVLSAKVLDPQFQGQIKERLNSRDAVRLV Sbjct: 305 LFQAVKSFVEMHALLPKGVKLMSEDVFARASFVLSAKVLDPQFQGQIKERLNSRDAVRLV 364 Query: 366 AGFSRPALELWLNQHVDYGKKLAELVIKQAQSRLRSAQKVEKKKSSGVAVLPGKLTDCES 425 + FSRPALELWLNQHVD+GKKLAELVIKQAQ+R R+AQKVEKKK SGVAVLPGKLTDCES Sbjct: 365 STFSRPALELWLNQHVDHGKKLAELVIKQAQARTRAAQKVEKKKGSGVAVLPGKLTDCES 424 Query: 426 SDVSRNELFLVEGDSAGGSAKMGRDKEFQAILPLRGKVLNAWETERDRLFANNEIHDIAV 485 DV+RNELFLVEGDSAGGSAKMGRDKEFQAILPLRGKVLN WETERDRLFANNE+HDIAV Sbjct: 425 DDVTRNELFLVEGDSAGGSAKMGRDKEFQAILPLRGKVLNTWETERDRLFANNEVHDIAV 484 Query: 486 AIGVDPHGINDTPDLSGLRYGKICILSDADVDGSHIQVLLLTLFFRHFPKLIENGNICVA 545 AIGVDPHG DT DLSGLRYGKICILSDADVDG+HIQVLLLTLFF+HFP+LI+ GN+CVA Sbjct: 485 AIGVDPHGPTDTVDLSGLRYGKICILSDADVDGAHIQVLLLTLFFKHFPQLIDRGNVCVA 544 Query: 546 RPPLYRVDAPARGKKPVQKLYALDDGELEAIEDKLRKDGLKEGAWSISRFKGLGEMNAEQ 605 RPPLYRVDAPARGKKP QKLYALDDGELEAIEDKLRKDG+KEGAW ISRFKGLGEM+AEQ Sbjct: 545 RPPLYRVDAPARGKKPAQKLYALDDGELEAIEDKLRKDGVKEGAWQISRFKGLGEMSAEQ 604 Query: 606 LWETTMNPDTRRLLPISFGEPGVQTSEERFNMLMGKGEAASRRAWIEEHGNEAEADI 662 LWETTMNPDTRRLLP++ GE G + NMLMGKGEA +RR W+E GNE EADI Sbjct: 605 LWETTMNPDTRRLLPVALGELGQDQTINMMNMLMGKGEAGARRTWLEARGNEVEADI 661 >emb|CCA85879.1| DNA topoisomerase IV, subunit B [Ralstonia syzygii R24] Length = 661 Score = 1114 bits (2881), Expect = 0.0, Method: Compositional matrix adjust. Identities = 543/655 (82%), Positives = 588/655 (89%), Gaps = 3/655 (0%) Query: 11 YSESSIRVLKGLEPVKQRPGMYTRTENPLHILQEVIDNASDEALGGYGKSIIVTMNADGS 70 YSE+SI+VLKGLEPVKQRPGMYTRT+NPLHI+QEVIDNA+DEALGGYGK I VT++ DGS Sbjct: 7 YSEASIKVLKGLEPVKQRPGMYTRTDNPLHIVQEVIDNAADEALGGYGKLIQVTLHKDGS 66 Query: 71 VSVEDDGRGIPVGLHPEEKVPTVEIVFTRLHAGGKFDKGSGGAYAFSGGLHGVGVSVTNA 130 VSVED+ RGIPVG+HPEE VP VEIVFTRLHAGGKFDKG GGAYAFSGGLHGVGVSVTNA Sbjct: 67 VSVEDEARGIPVGIHPEEGVPVVEIVFTRLHAGGKFDKGRGGAYAFSGGLHGVGVSVTNA 126 Query: 131 LATRLEITVWREGGVHTLAFSGGDVIEKLKSRPATRDDKKSGTRVTVWPDAKYFDSPTIP 190 L+TRLE+TVWR+GGV TLAFSGGDVIE L +R A R +KK+GTRV VWPD KYFDS IP Sbjct: 127 LSTRLEVTVWRDGGVSTLAFSGGDVIETLATRRAERGEKKNGTRVRVWPDGKYFDSENIP 186 Query: 191 MGELQRLLRSKAVLLPGVKVTLTNGKTGDSQSWQYDQGLRGYLMEQLAQTGSGETLIPLF 250 ELQRLLRSKAVLLPGVKV+LT K+G++ WQY+QGLRGYL+E LAQ + +IPLF Sbjct: 187 QAELQRLLRSKAVLLPGVKVSLTIEKSGETLEWQYEQGLRGYLIESLAQGSGADPVIPLF 246 Query: 251 EGEQFAGKD---ADGFAEGEGASWVVAWTEEGAVVRESYVNLIPTSNGGTHESGLREGLF 307 EGE FA D +GFA GEGASWVVAWTEEGA VRESYVNLIPT GGTHESGLREGLF Sbjct: 247 EGEHFADPDRPGEEGFAFGEGASWVVAWTEEGAPVRESYVNLIPTPAGGTHESGLREGLF 306 Query: 308 SAVKSFAEMHSLLPKGVKLLAEDVFARVSFVLSAKVLDPQFQGQIKERLNSRDAVRLVAG 367 AVKSF EMH+L PKGVKL++EDVFAR SFVLSAKVLDPQFQGQIKERLNSRDAVRLV+ Sbjct: 307 QAVKSFVEMHALCPKGVKLMSEDVFARASFVLSAKVLDPQFQGQIKERLNSRDAVRLVST 366 Query: 368 FSRPALELWLNQHVDYGKKLAELVIKQAQSRLRSAQKVEKKKSSGVAVLPGKLTDCESSD 427 FSRPALELWLNQHV+YGKKLAELVI+QAQ+R R+AQKVEKKK SGVAVLPGKLTDCES D Sbjct: 367 FSRPALELWLNQHVEYGKKLAELVIRQAQARTRAAQKVEKKKGSGVAVLPGKLTDCESDD 426 Query: 428 VSRNELFLVEGDSAGGSAKMGRDKEFQAILPLRGKVLNAWETERDRLFANNEIHDIAVAI 487 VSRNELFLVEGDSAGGSAKMGRDKEFQAILPLRGKVLN WETERDRLFANNE+HDIAVAI Sbjct: 427 VSRNELFLVEGDSAGGSAKMGRDKEFQAILPLRGKVLNTWETERDRLFANNEVHDIAVAI 486 Query: 488 GVDPHGINDTPDLSGLRYGKICILSDADVDGSHIQVLLLTLFFRHFPKLIENGNICVARP 547 GVDPHG ND+ DLSGLRYGKICILSDADVDG+HIQVLLLTLFF+HFP+LI GN+CVARP Sbjct: 487 GVDPHGPNDSVDLSGLRYGKICILSDADVDGAHIQVLLLTLFFKHFPQLIGRGNVCVARP 546 Query: 548 PLYRVDAPARGKKPVQKLYALDDGELEAIEDKLRKDGLKEGAWSISRFKGLGEMNAEQLW 607 PLYRVDAPARGKKP QKLYALDDGELEAIEDKLRKDGLKEG+W ISRFKGLGEM+AEQLW Sbjct: 547 PLYRVDAPARGKKPAQKLYALDDGELEAIEDKLRKDGLKEGSWQISRFKGLGEMSAEQLW 606 Query: 608 ETTMNPDTRRLLPISFGEPGVQTSEERFNMLMGKGEAASRRAWIEEHGNEAEADI 662 ETTMNPDTRRLLP+S GEPG + + NMLMGKGEA +RR W+E GNE EADI Sbjct: 607 ETTMNPDTRRLLPVSIGEPGPEQTVHMMNMLMGKGEAGARRTWLEARGNEVEADI 661 >ref|YP_003753056.1| DNA topoisomerase IV, subunit B [Ralstonia solanacearum PSI07] emb|CBJ51788.1| DNA topoisomerase IV, subunit B [Ralstonia solanacearum PSI07] emb|CCA83108.1| DNA topoisomerase IV, subunit B [blood disease bacterium R229] Length = 661 Score = 1110 bits (2870), Expect = 0.0, Method: Compositional matrix adjust. Identities = 540/655 (82%), Positives = 587/655 (89%), Gaps = 3/655 (0%) Query: 11 YSESSIRVLKGLEPVKQRPGMYTRTENPLHILQEVIDNASDEALGGYGKSIIVTMNADGS 70 YSE+SI+VLKGLEPVKQRPGMYTRT+NPLHI+QEVIDNA+DEALGGYGK I VT++ DGS Sbjct: 7 YSEASIKVLKGLEPVKQRPGMYTRTDNPLHIVQEVIDNAADEALGGYGKLIQVTLHKDGS 66 Query: 71 VSVEDDGRGIPVGLHPEEKVPTVEIVFTRLHAGGKFDKGSGGAYAFSGGLHGVGVSVTNA 130 VSVED+ RGIPVG+HPEE VP VEIVFTRLHAGGKFDKG GGAYAFSGGLHGVGVSVTNA Sbjct: 67 VSVEDEARGIPVGIHPEEGVPVVEIVFTRLHAGGKFDKGRGGAYAFSGGLHGVGVSVTNA 126 Query: 131 LATRLEITVWREGGVHTLAFSGGDVIEKLKSRPATRDDKKSGTRVTVWPDAKYFDSPTIP 190 L+TRLE+TVWR+GGV TL FSGGDVIE L +R A R +KK+GTRV VWPD KYFDS IP Sbjct: 127 LSTRLEVTVWRDGGVSTLTFSGGDVIETLATRRAERGEKKNGTRVRVWPDGKYFDSENIP 186 Query: 191 MGELQRLLRSKAVLLPGVKVTLTNGKTGDSQSWQYDQGLRGYLMEQLAQTGSGETLIPLF 250 ELQRLLRSKAVLLPGVKV+LT K+G++ WQY+QGLRGYL+E LAQ + +IPLF Sbjct: 187 QAELQRLLRSKAVLLPGVKVSLTIEKSGETLEWQYEQGLRGYLIESLAQGSGADPVIPLF 246 Query: 251 EGEQFAGKDA---DGFAEGEGASWVVAWTEEGAVVRESYVNLIPTSNGGTHESGLREGLF 307 EGE FA D +GFA GEGASWVVAWTEEGA VRESYVNLIPT GGTHESGLREGLF Sbjct: 247 EGEHFADPDKLGEEGFAFGEGASWVVAWTEEGAPVRESYVNLIPTPAGGTHESGLREGLF 306 Query: 308 SAVKSFAEMHSLLPKGVKLLAEDVFARVSFVLSAKVLDPQFQGQIKERLNSRDAVRLVAG 367 AVKSF EMH+L PKGVKL++EDVFAR SFVLSAKVLDPQFQGQIKERLNSRDAVRLV+ Sbjct: 307 QAVKSFVEMHALCPKGVKLMSEDVFARASFVLSAKVLDPQFQGQIKERLNSRDAVRLVST 366 Query: 368 FSRPALELWLNQHVDYGKKLAELVIKQAQSRLRSAQKVEKKKSSGVAVLPGKLTDCESSD 427 FSRPALELWLNQHV++GK+LAELVI+QAQ+R R+AQKVEKKK SGVAVLPGKLTDCES D Sbjct: 367 FSRPALELWLNQHVEHGKRLAELVIRQAQARTRAAQKVEKKKGSGVAVLPGKLTDCESDD 426 Query: 428 VSRNELFLVEGDSAGGSAKMGRDKEFQAILPLRGKVLNAWETERDRLFANNEIHDIAVAI 487 VSRNELFLVEGDSAGGSAKMGRDKEFQAILPLRGKVLN WETERDRLFANNE+HDIAVAI Sbjct: 427 VSRNELFLVEGDSAGGSAKMGRDKEFQAILPLRGKVLNTWETERDRLFANNEVHDIAVAI 486 Query: 488 GVDPHGINDTPDLSGLRYGKICILSDADVDGSHIQVLLLTLFFRHFPKLIENGNICVARP 547 GVDPHG ND+ DLSGLRYGKICILSDADVDG+HIQVLLLTLFF+HFP+LI GN+CVARP Sbjct: 487 GVDPHGPNDSVDLSGLRYGKICILSDADVDGAHIQVLLLTLFFKHFPQLIGRGNVCVARP 546 Query: 548 PLYRVDAPARGKKPVQKLYALDDGELEAIEDKLRKDGLKEGAWSISRFKGLGEMNAEQLW 607 PLYRVDAPARGKKP QKLYALDDGELEAIEDKLRKDGLKEG+W ISRFKGLGEM+AEQLW Sbjct: 547 PLYRVDAPARGKKPAQKLYALDDGELEAIEDKLRKDGLKEGSWQISRFKGLGEMSAEQLW 606 Query: 608 ETTMNPDTRRLLPISFGEPGVQTSEERFNMLMGKGEAASRRAWIEEHGNEAEADI 662 ETTMNPDTRRLLP+S GEPG + + NMLMGKGEA +RR W+E GNE EADI Sbjct: 607 ETTMNPDTRRLLPVSIGEPGPEQTVHVMNMLMGKGEAGARRTWLEARGNEVEADI 661