BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0037.0010.p         (74 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003775234.1| hypothetical protein Hsero_1816 [Herbaspiril...   149   1e-34
ref|ZP_05291604.1| Protein of unknown function DUF1778 [Acidithi...    67   9e-10
ref|YP_004750283.1| hypothetical protein Atc_m052 [Acidithiobaci...    67   9e-10

>ref|YP_003775234.1| hypothetical protein Hsero_1816 [Herbaspirillum seropedicae SmR1]
 gb|ADJ63326.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
          Length = 106

 Score =  149 bits (377), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 74/74 (100%), Positives = 74/74 (100%)

Query: 1   MNQFLVQAALEKANEVIDRERFIAVTPRDADFLLNLLDDPSPANAKLMRARERYHRARHE 60
           MNQFLVQAALEKANEVIDRERFIAVTPRDADFLLNLLDDPSPANAKLMRARERYHRARHE
Sbjct: 33  MNQFLVQAALEKANEVIDRERFIAVTPRDADFLLNLLDDPSPANAKLMRARERYHRARHE 92

Query: 61  RVLRSTTEQDAASD 74
           RVLRSTTEQDAASD
Sbjct: 93  RVLRSTTEQDAASD 106


>ref|ZP_05291604.1| Protein of unknown function DUF1778 [Acidithiobacillus caldus
          ATCC 51756]
 gb|EET28512.1| Protein of unknown function DUF1778 [Acidithiobacillus caldus
          ATCC 51756]
          Length = 103

 Score = 67.0 bits (162), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 32/60 (53%), Positives = 46/60 (76%)

Query: 1  MNQFLVQAALEKANEVIDRERFIAVTPRDADFLLNLLDDPSPANAKLMRARERYHRARHE 60
          +NQFLVQAAL++A EV++RE  I +TPRD ++LL+LL+ P   NAKL  A  R+H+++ E
Sbjct: 34 VNQFLVQAALKEAQEVLEREAVIRLTPRDWNWLLDLLESPPEPNAKLKAAMMRHHQSKRE 93


>ref|YP_004750283.1| hypothetical protein Atc_m052 [Acidithiobacillus caldus SM-1]
 gb|AEK59583.1| Protein of unknown function DUF1778 [Acidithiobacillus caldus
          SM-1]
          Length = 103

 Score = 67.0 bits (162), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 32/60 (53%), Positives = 46/60 (76%)

Query: 1  MNQFLVQAALEKANEVIDRERFIAVTPRDADFLLNLLDDPSPANAKLMRARERYHRARHE 60
          +NQFLVQAAL++A EV++RE  I +TPRD ++LL+LL+ P   NAKL  A  R+H+++ E
Sbjct: 34 VNQFLVQAALKEAQEVLEREAVIRLTPRDWNWLLDLLESPPEPNAKLKAAMMRHHQSKRE 93