BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0036.0118.p (101 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777074.1| integration host factor subunit beta [Herbas... 204 4e-51 ref|YP_004754394.1| integration host factor subunit beta [Collim... 202 2e-50 ref|YP_001100816.1| integration host factor subunit beta [Hermin... 196 9e-49 ref|ZP_08274482.1| Integration host factor beta subunit [Oxaloba... 178 2e-43 ref|ZP_02467909.1| integration host factor subunit beta [Burkhol... 167 6e-40 ref|YP_001856982.1| integration host factor subunit beta [Burkho... 167 7e-40 ref|ZP_08505663.1| Integration host factor subunit beta [Methylo... 166 1e-39 ref|YP_109110.1| integration host factor subunit beta [Burkholde... 165 2e-39 ref|YP_442176.1| integration host factor subunit beta [Burkholde... 165 2e-39 ref|YP_004028378.1| integration host factor beta-subunit [Burkho... 165 3e-39 >ref|YP_003777074.1| integration host factor subunit beta [Herbaspirillum seropedicae SmR1] gb|ADJ65166.1| integration host factor beta-subunit (IHF-beta) protein [Herbaspirillum seropedicae SmR1] Length = 101 Score = 204 bits (519), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 101/101 (100%), Positives = 101/101 (100%) Query: 1 MTKSELIARLAERYPQLVAKDADYAVKTILDAMVDALATGQRIEIRGFGSFALNRRPPRI 60 MTKSELIARLAERYPQLVAKDADYAVKTILDAMVDALATGQRIEIRGFGSFALNRRPPRI Sbjct: 1 MTKSELIARLAERYPQLVAKDADYAVKTILDAMVDALATGQRIEIRGFGSFALNRRPPRI 60 Query: 61 GRNPKSGDKVMVPEKRVPHFKPGKELRERVDAMVGQPIRED 101 GRNPKSGDKVMVPEKRVPHFKPGKELRERVDAMVGQPIRED Sbjct: 61 GRNPKSGDKVMVPEKRVPHFKPGKELRERVDAMVGQPIRED 101 >ref|YP_004754394.1| integration host factor subunit beta [Collimonas fungivorans Ter331] gb|AEK63571.1| Integration host factor beta subunit [Collimonas fungivorans Ter331] Length = 101 Score = 202 bits (513), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 99/101 (98%), Positives = 100/101 (99%) Query: 1 MTKSELIARLAERYPQLVAKDADYAVKTILDAMVDALATGQRIEIRGFGSFALNRRPPRI 60 MTKSELIARLAERYPQLVAKDADYAVKTILDAM DAL+TGQRIEIRGFGSFALNRRPPRI Sbjct: 1 MTKSELIARLAERYPQLVAKDADYAVKTILDAMADALSTGQRIEIRGFGSFALNRRPPRI 60 Query: 61 GRNPKSGDKVMVPEKRVPHFKPGKELRERVDAMVGQPIRED 101 GRNPKSGDKVMVPEKRVPHFKPGKELRERVDAMVGQPIRED Sbjct: 61 GRNPKSGDKVMVPEKRVPHFKPGKELRERVDAMVGQPIRED 101 >ref|YP_001100816.1| integration host factor subunit beta [Herminiimonas arsenicoxydans] ref|YP_001354357.1| integration host factor subunit beta [Janthinobacterium sp. Marseille] sp|A4G858.1|IHFB_HERAR RecName: Full=Integration host factor subunit beta; Short=IHF-beta sp|A6T1G0.1|IHFB_JANMA RecName: Full=Integration host factor subunit beta; Short=IHF-beta emb|CAL62695.1| Integration host factor subunit beta (IHF-beta) [Herminiimonas arsenicoxydans] gb|ABR89250.1| integration host factor beta-subunit [Janthinobacterium sp. Marseille] Length = 101 Score = 196 bits (498), Expect = 9e-49, Method: Compositional matrix adjust. Identities = 97/101 (96%), Positives = 98/101 (97%) Query: 1 MTKSELIARLAERYPQLVAKDADYAVKTILDAMVDALATGQRIEIRGFGSFALNRRPPRI 60 MTKSELIARLAERYPQLVAKDADYAVKTILDAM DALATGQRIEIRGFGSFALN RPPRI Sbjct: 1 MTKSELIARLAERYPQLVAKDADYAVKTILDAMSDALATGQRIEIRGFGSFALNSRPPRI 60 Query: 61 GRNPKSGDKVMVPEKRVPHFKPGKELRERVDAMVGQPIRED 101 GRNPKSGDKVMVPEKRVPHFKPGK+LRERVDAMVGQPI ED Sbjct: 61 GRNPKSGDKVMVPEKRVPHFKPGKQLRERVDAMVGQPIIED 101 >ref|ZP_08274482.1| Integration host factor beta subunit [Oxalobacteraceae bacterium IMCC9480] gb|EGF32042.1| Integration host factor beta subunit [Oxalobacteraceae bacterium IMCC9480] Length = 92 Score = 178 bits (452), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 86/92 (93%), Positives = 90/92 (97%) Query: 10 LAERYPQLVAKDADYAVKTILDAMVDALATGQRIEIRGFGSFALNRRPPRIGRNPKSGDK 69 +AERYPQLVAKDADYAVKTILDAM+DALATGQRIEIRGFGSF+LN RPPRIGRNPKSG+K Sbjct: 1 MAERYPQLVAKDADYAVKTILDAMIDALATGQRIEIRGFGSFSLNSRPPRIGRNPKSGEK 60 Query: 70 VMVPEKRVPHFKPGKELRERVDAMVGQPIRED 101 VMVPEKRVPHFKPGKELRERVDAMVGQPI ED Sbjct: 61 VMVPEKRVPHFKPGKELRERVDAMVGQPIIED 92 >ref|ZP_02467909.1| integration host factor subunit beta [Burkholderia thailandensis MSMB43] Length = 107 Score = 167 bits (422), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 78/101 (77%), Positives = 89/101 (88%) Query: 1 MTKSELIARLAERYPQLVAKDADYAVKTILDAMVDALATGQRIEIRGFGSFALNRRPPRI 60 MTKSEL+A+LA R+PQLV KDAD+AVKT+LDAM DAL+ G RIEIRGFGSF LNRRP R+ Sbjct: 1 MTKSELVAQLASRFPQLVLKDADFAVKTMLDAMSDALSKGHRIEIRGFGSFGLNRRPARV 60 Query: 61 GRNPKSGDKVMVPEKRVPHFKPGKELRERVDAMVGQPIRED 101 GRNPKSG+KV VPEKRVPHFKPGKELRERVD G+P++ D Sbjct: 61 GRNPKSGEKVQVPEKRVPHFKPGKELRERVDGRAGEPLKND 101 >ref|YP_001856982.1| integration host factor subunit beta [Burkholderia phymatum STM815] sp|B2JF07.1|IHFB_BURP8 RecName: Full=Integration host factor subunit beta; Short=IHF-beta gb|ACC69936.1| integration host factor, beta subunit [Burkholderia phymatum STM815] Length = 107 Score = 167 bits (422), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 78/101 (77%), Positives = 89/101 (88%) Query: 1 MTKSELIARLAERYPQLVAKDADYAVKTILDAMVDALATGQRIEIRGFGSFALNRRPPRI 60 MTKSEL+A+LA R+PQLV KDAD+AVKT+LDAM DALA G RIEIRGFGSF LNRRP R+ Sbjct: 1 MTKSELVAQLATRFPQLVLKDADFAVKTMLDAMSDALANGHRIEIRGFGSFGLNRRPSRV 60 Query: 61 GRNPKSGDKVMVPEKRVPHFKPGKELRERVDAMVGQPIRED 101 GRNPKSG+KV+VPEK VPHFKPGKELRERVD G+P++ D Sbjct: 61 GRNPKSGEKVLVPEKHVPHFKPGKELRERVDRNAGEPLKAD 101 >ref|ZP_08505663.1| Integration host factor subunit beta [Methyloversatilis universalis FAM5] gb|EGK71339.1| Integration host factor subunit beta [Methyloversatilis universalis FAM5] Length = 101 Score = 166 bits (420), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 80/99 (80%), Positives = 87/99 (87%) Query: 1 MTKSELIARLAERYPQLVAKDADYAVKTILDAMVDALATGQRIEIRGFGSFALNRRPPRI 60 MTKSELIARLA R+PQLVAKDADYAVK ILD M +AL G RIEIRGFGSF+LN RPPR+ Sbjct: 1 MTKSELIARLATRFPQLVAKDADYAVKMILDEMTEALVRGDRIEIRGFGSFSLNHRPPRV 60 Query: 61 GRNPKSGDKVMVPEKRVPHFKPGKELRERVDAMVGQPIR 99 GRNPKSG+KVMVPEKRVPHFK GKELRERVD VG P++ Sbjct: 61 GRNPKSGEKVMVPEKRVPHFKAGKELRERVDNAVGTPVQ 99 >ref|YP_109110.1| integration host factor subunit beta [Burkholderia pseudomallei K96243] ref|YP_102240.1| integration host factor subunit beta [Burkholderia mallei ATCC 23344] ref|YP_334371.1| integration host factor subunit beta [Burkholderia pseudomallei 1710b] ref|YP_993873.1| integration host factor subunit beta [Burkholderia mallei SAVP1] ref|YP_001026936.1| integration host factor subunit beta [Burkholderia mallei NCTC 10229] ref|YP_001059900.1| integration host factor subunit beta [Burkholderia pseudomallei 668] ref|YP_001079777.1| integration host factor subunit beta [Burkholderia mallei NCTC 10247] ref|YP_001067189.1| integration host factor subunit beta [Burkholderia pseudomallei 1106a] ref|ZP_01763848.1| integration host factor, beta subunit [Burkholderia pseudomallei 305] ref|ZP_02265567.1| integration host factor, beta subunit [Burkholderia mallei PRL-20] ref|ZP_02403901.1| integration host factor subunit beta [Burkholderia pseudomallei DM98] ref|ZP_02412426.1| integration host factor subunit beta [Burkholderia pseudomallei 14] ref|ZP_02448537.1| integration host factor subunit beta [Burkholderia pseudomallei 91] ref|ZP_02456728.1| integration host factor subunit beta [Burkholderia pseudomallei 9] ref|ZP_02472269.1| integration host factor subunit beta [Burkholderia pseudomallei B7210] ref|ZP_02482751.1| integration host factor subunit beta [Burkholderia pseudomallei 7894] ref|ZP_02490940.1| integration host factor subunit beta [Burkholderia pseudomallei NCTC 13177] ref|ZP_02499075.1| integration host factor subunit beta [Burkholderia pseudomallei 112] ref|ZP_02507066.1| integration host factor subunit beta [Burkholderia pseudomallei BCC215] ref|ZP_03452031.1| integration host factor, beta subunit [Burkholderia pseudomallei 576] ref|YP_002897745.1| integration host factor, beta subunit [Burkholderia pseudomallei MSHR346] ref|ZP_00441665.2| integration host factor, beta subunit [Burkholderia mallei GB8 horse 4] ref|ZP_04816621.1| integration host factor, beta subunit [Burkholderia pseudomallei 1106b] ref|ZP_04883676.1| integration host factor, beta subunit [Burkholderia mallei ATCC 10399] ref|ZP_04887688.1| integration host factor, beta subunit [Burkholderia pseudomallei 1655] ref|ZP_04898494.1| integration host factor, beta subunit [Burkholderia pseudomallei Pasteur 52237] ref|ZP_04902018.1| integration host factor, beta subunit [Burkholderia pseudomallei S13] ref|ZP_04910284.1| integration host factor, beta subunit [Burkholderia mallei FMH] ref|ZP_04915252.1| integration host factor, beta subunit [Burkholderia mallei JHU] ref|ZP_04949316.1| integration host factor, beta subunit [Burkholderia pseudomallei 1710a] ref|ZP_04976311.1| integration host factor, beta subunit [Burkholderia mallei 2002721280] sp|Q62M28.1|IHFB_BURMA RecName: Full=Integration host factor subunit beta; Short=IHF-beta sp|Q63S07.1|IHFB_BURPS RecName: Full=Integration host factor subunit beta; Short=IHF-beta sp|Q3JPY2.1|IHFB_BURP1 RecName: Full=Integration host factor subunit beta; Short=IHF-beta sp|A3MHP1.1|IHFB_BURM7 RecName: Full=Integration host factor subunit beta; Short=IHF-beta sp|A2S4R7.1|IHFB_BURM9 RecName: Full=Integration host factor subunit beta; Short=IHF-beta sp|A1V6M0.1|IHFB_BURMS RecName: Full=Integration host factor subunit beta; Short=IHF-beta sp|A3NXW8.1|IHFB_BURP0 RecName: Full=Integration host factor subunit beta; Short=IHF-beta sp|A3NC29.1|IHFB_BURP6 RecName: Full=Integration host factor subunit beta; Short=IHF-beta emb|CAH36521.1| integration host factor beta-subunit [Burkholderia pseudomallei K96243] gb|AAU48802.1| integration host factor, beta subunit [Burkholderia mallei ATCC 23344] gb|ABA49756.1| integration host factor, beta subunit [Burkholderia pseudomallei 1710b] gb|ABM49863.1| integration host factor, beta subunit [Burkholderia mallei SAVP1] gb|ABN02307.1| integration host factor, beta subunit [Burkholderia mallei NCTC 10229] gb|ABN84394.1| integration host factor, beta subunit [Burkholderia pseudomallei 668] gb|ABN89373.1| integration host factor, beta subunit [Burkholderia pseudomallei 1106a] gb|ABO07345.1| integration host factor, beta subunit [Burkholderia mallei NCTC 10247] gb|EBA50862.1| integration host factor, beta subunit [Burkholderia pseudomallei 305] gb|EDK52516.1| integration host factor, beta subunit [Burkholderia mallei FMH] gb|EDK57849.1| integration host factor, beta subunit [Burkholderia mallei JHU] gb|EDK87186.1| integration host factor, beta subunit [Burkholderia mallei 2002721280] gb|EDO95581.1| integration host factor, beta subunit [Burkholderia pseudomallei Pasteur 52237] gb|EDP88030.1| integration host factor, beta subunit [Burkholderia mallei ATCC 10399] gb|EDS85030.1| integration host factor, beta subunit [Burkholderia pseudomallei S13] gb|EDU08672.1| integration host factor, beta subunit [Burkholderia pseudomallei 1655] gb|EEC35955.1| integration host factor, beta subunit [Burkholderia pseudomallei 576] gb|ACQ96862.1| integration host factor, beta subunit [Burkholderia pseudomallei MSHR346] gb|EEP87566.1| integration host factor, beta subunit [Burkholderia mallei GB8 horse 4] gb|EES27246.1| integration host factor, beta subunit [Burkholderia pseudomallei 1106b] gb|EES46412.1| integration host factor, beta subunit [Burkholderia mallei PRL-20] gb|EET06335.1| integration host factor, beta subunit [Burkholderia pseudomallei 1710a] Length = 107 Score = 165 bits (418), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 77/101 (76%), Positives = 88/101 (87%) Query: 1 MTKSELIARLAERYPQLVAKDADYAVKTILDAMVDALATGQRIEIRGFGSFALNRRPPRI 60 MTKSEL+A+LA R+PQLV KDAD+AVKT+LDAM DAL+ G RIEIRGFGSF LNRRP R+ Sbjct: 1 MTKSELVAQLASRFPQLVLKDADFAVKTMLDAMSDALSKGHRIEIRGFGSFGLNRRPARV 60 Query: 61 GRNPKSGDKVMVPEKRVPHFKPGKELRERVDAMVGQPIRED 101 GRNPKSG+KV VPEK VPHFKPGKELRERVD G+P++ D Sbjct: 61 GRNPKSGEKVQVPEKHVPHFKPGKELRERVDGRAGEPLKND 101 >ref|YP_442176.1| integration host factor subunit beta [Burkholderia thailandensis E264] ref|ZP_02373928.1| integration host factor subunit beta [Burkholderia thailandensis TXDOH] ref|ZP_02387763.1| integration host factor subunit beta [Burkholderia thailandensis Bt4] ref|ZP_05586627.1| integration host factor subunit beta [Burkholderia thailandensis E264] sp|Q2SY23.1|IHFB_BURTA RecName: Full=Integration host factor subunit beta; Short=IHF-beta gb|ABC38653.1| integration host factor, beta subunit [Burkholderia thailandensis E264] Length = 107 Score = 165 bits (418), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 77/101 (76%), Positives = 88/101 (87%) Query: 1 MTKSELIARLAERYPQLVAKDADYAVKTILDAMVDALATGQRIEIRGFGSFALNRRPPRI 60 MTKSEL+A+LA R+PQLV KDAD+AVKT+LDAM DAL+ G RIEIRGFGSF LNRRP R+ Sbjct: 1 MTKSELVAQLASRFPQLVLKDADFAVKTMLDAMSDALSKGHRIEIRGFGSFGLNRRPARV 60 Query: 61 GRNPKSGDKVMVPEKRVPHFKPGKELRERVDAMVGQPIRED 101 GRNPKSG+KV VPEK VPHFKPGKELRERVD G+P++ D Sbjct: 61 GRNPKSGEKVQVPEKHVPHFKPGKELRERVDGRAGEPLKND 101 >ref|YP_004028378.1| integration host factor beta-subunit [Burkholderia rhizoxinica HKI 454] emb|CBW74234.1| Integration host factor beta-subunit [Burkholderia rhizoxinica HKI 454] Length = 109 Score = 165 bits (417), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 78/101 (77%), Positives = 88/101 (87%) Query: 1 MTKSELIARLAERYPQLVAKDADYAVKTILDAMVDALATGQRIEIRGFGSFALNRRPPRI 60 MTKSEL+A+LA R+PQLV KDAD+AVK +LDAM DALA G RIEIRGFGSFALNRRP R+ Sbjct: 1 MTKSELVAQLALRFPQLVLKDADFAVKAMLDAMSDALANGHRIEIRGFGSFALNRRPARV 60 Query: 61 GRNPKSGDKVMVPEKRVPHFKPGKELRERVDAMVGQPIRED 101 GRNPKSG++V VPEK VPHFKPGKELRERVD GQP++ D Sbjct: 61 GRNPKSGERVQVPEKWVPHFKPGKELRERVDGKAGQPMKAD 101