BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0036.0116.p (222 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777076.1| cytidylate kinase [Herbaspirillum seropedica... 456 e-126 ref|YP_004754396.1| cytidylate kinase [Collimonas fungivorans Te... 367 e-100 ref|YP_001354359.1| cytidylate kinase [Janthinobacterium sp. Mar... 326 1e-87 ref|YP_001100818.1| cytidine monophosphate (CMP) kinase [Hermini... 326 2e-87 ref|ZP_08274480.1| Cytidylate kinase [Oxalobacteraceae bacterium... 323 1e-86 ref|YP_582876.1| cytidylate kinase [Cupriavidus metallidurans CH... 283 2e-74 ref|YP_725312.1| cytidylate kinase [Ralstonia eutropha H16] >gi|... 275 5e-72 ref|YP_004684652.1| cytidylate kinase Cmk [Cupriavidus necator N... 275 5e-72 ref|YP_296775.1| cytidylate kinase [Ralstonia eutropha JMP134] >... 273 1e-71 ref|YP_002004819.1| cytidylate kinase [Cupriavidus taiwanensis L... 273 1e-71 >ref|YP_003777076.1| cytidylate kinase [Herbaspirillum seropedicae SmR1] gb|ADJ65168.1| cytidylate kinase protein [Herbaspirillum seropedicae SmR1] Length = 222 Score = 456 bits (1172), Expect = e-126, Method: Compositional matrix adjust. Identities = 222/222 (100%), Positives = 222/222 (100%) Query: 1 MEKPKIPVITIDGPTASGKGTVAQKVAQQLGFHYLDSGALYRLTALSVLRRGIALNDEHA 60 MEKPKIPVITIDGPTASGKGTVAQKVAQQLGFHYLDSGALYRLTALSVLRRGIALNDEHA Sbjct: 1 MEKPKIPVITIDGPTASGKGTVAQKVAQQLGFHYLDSGALYRLTALSVLRRGIALNDEHA 60 Query: 61 LAKAAEHLHCHFDGAHIFLSNEDVTQAIRAEEVGNTASKIAALITVRQALYGLQLSFRKP 120 LAKAAEHLHCHFDGAHIFLSNEDVTQAIRAEEVGNTASKIAALITVRQALYGLQLSFRKP Sbjct: 61 LAKAAEHLHCHFDGAHIFLSNEDVTQAIRAEEVGNTASKIAALITVRQALYGLQLSFRKP 120 Query: 121 PGLVADGRDMGTVIFPGARLKVFLTASVEARATRRYKQLIDKGFSANIEDLSRDLKERDE 180 PGLVADGRDMGTVIFPGARLKVFLTASVEARATRRYKQLIDKGFSANIEDLSRDLKERDE Sbjct: 121 PGLVADGRDMGTVIFPGARLKVFLTASVEARATRRYKQLIDKGFSANIEDLSRDLKERDE 180 Query: 181 RDMSRSSAPLKPAEGAYHLDTSDMTADEAVQQVLSWYAALGH 222 RDMSRSSAPLKPAEGAYHLDTSDMTADEAVQQVLSWYAALGH Sbjct: 181 RDMSRSSAPLKPAEGAYHLDTSDMTADEAVQQVLSWYAALGH 222 >ref|YP_004754396.1| cytidylate kinase [Collimonas fungivorans Ter331] gb|AEK63573.1| Cytidylate kinase [Collimonas fungivorans Ter331] Length = 232 Score = 367 bits (941), Expect = e-100, Method: Compositional matrix adjust. Identities = 184/223 (82%), Positives = 195/223 (87%), Gaps = 4/223 (1%) Query: 1 MEKPKIPVITIDGPTASGKGTVAQKVAQQLGFHYLDSGALYRLTALSVLRRG----IALN 56 M P IPVITIDGPTASGKGTVAQ+VAQ LGFHYLDSGALYRLTALSV+RR I L+ Sbjct: 1 MSNPPIPVITIDGPTASGKGTVAQRVAQHLGFHYLDSGALYRLTALSVMRRANGNPIPLD 60 Query: 57 DEHALAKAAEHLHCHFDGAHIFLSNEDVTQAIRAEEVGNTASKIAALITVRQALYGLQLS 116 DEHALAKAAEHLHCHF GAHIFL+NEDV+ IRAE VGN ASKIAA+ TVRQALYGLQLS Sbjct: 61 DEHALAKAAEHLHCHFSGAHIFLANEDVSNDIRAEAVGNLASKIAAIPTVRQALYGLQLS 120 Query: 117 FRKPPGLVADGRDMGTVIFPGARLKVFLTASVEARATRRYKQLIDKGFSANIEDLSRDLK 176 FR+ PGLVADGRDMGTVIFP A LKVFLTASVEARA RRYKQLIDKGFSAN+EDLS+DL Sbjct: 121 FRQHPGLVADGRDMGTVIFPHAGLKVFLTASVEARALRRYKQLIDKGFSANMEDLSKDLT 180 Query: 177 ERDERDMSRSSAPLKPAEGAYHLDTSDMTADEAVQQVLSWYAA 219 ERD RD +RSSAPLK AEGAY LDTS MTAD+AV QVL WYAA Sbjct: 181 ERDARDSNRSSAPLKAAEGAYLLDTSAMTADQAVAQVLEWYAA 223 >ref|YP_001354359.1| cytidylate kinase [Janthinobacterium sp. Marseille] gb|ABR89225.1| cytidylate kinase [Janthinobacterium sp. Marseille] Length = 225 Score = 326 bits (836), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 161/217 (74%), Positives = 182/217 (83%) Query: 6 IPVITIDGPTASGKGTVAQKVAQQLGFHYLDSGALYRLTALSVLRRGIALNDEHALAKAA 65 IPVITIDGPTASGKGTVAQ VA +LGFHYLDSGALYRLTALS L RGIA++DE A+AK+ Sbjct: 9 IPVITIDGPTASGKGTVAQLVATELGFHYLDSGALYRLTALSALYRGIAIDDEQAVAKSV 68 Query: 66 EHLHCHFDGAHIFLSNEDVTQAIRAEEVGNTASKIAALITVRQALYGLQLSFRKPPGLVA 125 E L+C F IFL E+VT +IRAEEVGNTASKIAAL VR+AL LQL FR+ PGL+A Sbjct: 69 ETLNCGFKDGDIFLDRENVTMSIRAEEVGNTASKIAALPAVRKALVDLQLRFREAPGLIA 128 Query: 126 DGRDMGTVIFPGARLKVFLTASVEARATRRYKQLIDKGFSANIEDLSRDLKERDERDMSR 185 DGRDMGTVIFP A+LKVFLTAS EARA RRYKQLIDKGFSANIEDL +DL ERD RD +R Sbjct: 129 DGRDMGTVIFPDAKLKVFLTASAEARAERRYKQLIDKGFSANIEDLLKDLNERDARDANR 188 Query: 186 SSAPLKPAEGAYHLDTSDMTADEAVQQVLSWYAALGH 222 + APLKPAE AY LDTS++T +AV QVL+WYAA+ + Sbjct: 189 AIAPLKPAEEAYLLDTSNLTVQQAVDQVLAWYAAVKN 225 >ref|YP_001100818.1| cytidine monophosphate (CMP) kinase [Herminiimonas arsenicoxydans] emb|CAL62697.1| Cytidylate kinase (CK) (Cytidine monophosphate kinase) (CMP kinase) [Herminiimonas arsenicoxydans] Length = 229 Score = 326 bits (835), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 162/215 (75%), Positives = 176/215 (81%) Query: 4 PKIPVITIDGPTASGKGTVAQKVAQQLGFHYLDSGALYRLTALSVLRRGIALNDEHALAK 63 P IPVI IDGPTASGKGTVAQ VA QLGFHYLDSGALYRLTALS LR +ALNDE ALAK Sbjct: 9 PYIPVIAIDGPTASGKGTVAQLVATQLGFHYLDSGALYRLTALSALRNAVALNDEQALAK 68 Query: 64 AAEHLHCHFDGAHIFLSNEDVTQAIRAEEVGNTASKIAALITVRQALYGLQLSFRKPPGL 123 AE L C F IFL+ E+VT AIRAEEVGN ASKIAAL +RQAL LQL FR PGL Sbjct: 69 LAETLQCSFTNGDIFLAGENVTLAIRAEEVGNAASKIAALPALRQALVALQLRFRTAPGL 128 Query: 124 VADGRDMGTVIFPGARLKVFLTASVEARATRRYKQLIDKGFSANIEDLSRDLKERDERDM 183 +ADGRDMGTVIFP A LKVFLTAS EARA RRYKQLIDKGFSAN++DL +DL ERD RD Sbjct: 129 IADGRDMGTVIFPDADLKVFLTASPEARAQRRYKQLIDKGFSANMQDLLKDLNERDARDA 188 Query: 184 SRSSAPLKPAEGAYHLDTSDMTADEAVQQVLSWYA 218 +R+ APLKPAEGAY LDTS++T +AV+QVL WYA Sbjct: 189 NRAVAPLKPAEGAYLLDTSNLTVHQAVEQVLGWYA 223 >ref|ZP_08274480.1| Cytidylate kinase [Oxalobacteraceae bacterium IMCC9480] gb|EGF32040.1| Cytidylate kinase [Oxalobacteraceae bacterium IMCC9480] Length = 231 Score = 323 bits (827), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 161/219 (73%), Positives = 178/219 (81%) Query: 1 MEKPKIPVITIDGPTASGKGTVAQKVAQQLGFHYLDSGALYRLTALSVLRRGIALNDEHA 60 M IPVITIDGPTASGKGTVA VA +LG HYLDSGALYRLTALS +R+ I DEH Sbjct: 1 MPLTTIPVITIDGPTASGKGTVAHLVAVRLGLHYLDSGALYRLTALSAMRKHIEPTDEHG 60 Query: 61 LAKAAEHLHCHFDGAHIFLSNEDVTQAIRAEEVGNTASKIAALITVRQALYGLQLSFRKP 120 LAKAA L+CHF+G H+FLSNEDV+ AIRAEEVGN AS+IA L TVRQALY LQL FR P Sbjct: 61 LAKAAAGLNCHFNGEHVFLSNEDVSAAIRAEEVGNLASRIATLPTVRQALYALQLGFRSP 120 Query: 121 PGLVADGRDMGTVIFPGARLKVFLTASVEARATRRYKQLIDKGFSANIEDLSRDLKERDE 180 PGLVADGRDMGTVIFP A LKVFLTAS EARA RR+KQLI KG SA + DL +DL ERD Sbjct: 121 PGLVADGRDMGTVIFPRATLKVFLTASAEARAERRFKQLIAKGMSATMHDLLKDLNERDA 180 Query: 181 RDMSRSSAPLKPAEGAYHLDTSDMTADEAVQQVLSWYAA 219 RD +R+ APLKPAE AY L+TS+MTA+ AV QVL+WYAA Sbjct: 181 RDANRTIAPLKPAEDAYLLETSNMTAEAAVTQVLAWYAA 219 >ref|YP_582876.1| cytidylate kinase [Cupriavidus metallidurans CH34] sp|Q1LQG9.1|KCY_RALME RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine monophosphate kinase; Short=CMP kinase gb|ABF07607.1| cytidylate kinase [Cupriavidus metallidurans CH34] Length = 219 Score = 283 bits (723), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 146/215 (67%), Positives = 164/215 (76%) Query: 6 IPVITIDGPTASGKGTVAQKVAQQLGFHYLDSGALYRLTALSVLRRGIALNDEHALAKAA 65 + VITIDGPTASGKGTVA KVA LGFH LDSGALYRL AL+ R G+ + D LAK A Sbjct: 4 VDVITIDGPTASGKGTVAHKVADALGFHLLDSGALYRLVALASDRAGVGVQDVDTLAKMA 63 Query: 66 EHLHCHFDGAHIFLSNEDVTQAIRAEEVGNTASKIAALITVRQALYGLQLSFRKPPGLVA 125 L F ++LS E+V+Q IR E +GN AS IA VR AL LQ FRK PGLVA Sbjct: 64 ARLDVKFGPDRVWLSGEEVSQTIRLEAIGNRASAIAVHQPVRDALTALQRGFRKLPGLVA 123 Query: 126 DGRDMGTVIFPGARLKVFLTASVEARATRRYKQLIDKGFSANIEDLSRDLKERDERDMSR 185 DGRDMGTVIFP A LKVFLTASVEARA RRYKQLIDKG SANIEDL RDL+ERD RD +R Sbjct: 124 DGRDMGTVIFPDAPLKVFLTASVEARARRRYKQLIDKGISANIEDLLRDLEERDARDRTR 183 Query: 186 SSAPLKPAEGAYHLDTSDMTADEAVQQVLSWYAAL 220 ++APL+PAEGAY LDTS+MT +EAV QVL W+AA+ Sbjct: 184 AAAPLRPAEGAYRLDTSEMTVEEAVAQVLEWFAAV 218 >ref|YP_725312.1| cytidylate kinase [Ralstonia eutropha H16] sp|Q0KDH7.1|KCY_RALEH RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine monophosphate kinase; Short=CMP kinase emb|CAJ91944.1| cytidylate kinase [Ralstonia eutropha H16] Length = 222 Score = 275 bits (702), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 146/215 (67%), Positives = 162/215 (75%) Query: 6 IPVITIDGPTASGKGTVAQKVAQQLGFHYLDSGALYRLTALSVLRRGIALNDEHALAKAA 65 + VI IDGPTASGKGTVA KVA +GFH LDSGALYRL AL+ R GI L D ALAK A Sbjct: 4 VNVIAIDGPTASGKGTVAHKVADAVGFHLLDSGALYRLVALASDRAGIDLADVDALAKIA 63 Query: 66 EHLHCHFDGAHIFLSNEDVTQAIRAEEVGNTASKIAALITVRQALYGLQLSFRKPPGLVA 125 L F ++L E+V+ AIRAE +GN AS IA VR AL LQ SFRK PGLVA Sbjct: 64 SRLDVKFGPDRVWLQGEEVSLAIRAEAIGNRASAIAVHQPVRDALTQLQRSFRKLPGLVA 123 Query: 126 DGRDMGTVIFPGARLKVFLTASVEARATRRYKQLIDKGFSANIEDLSRDLKERDERDMSR 185 DGRDMGTVIFP A LKVFLTASVEARA RRYKQLIDKG SANIEDL RDL+ RD RD +R Sbjct: 124 DGRDMGTVIFPDAPLKVFLTASVEARARRRYKQLIDKGISANIEDLLRDLEARDVRDRTR 183 Query: 186 SSAPLKPAEGAYHLDTSDMTADEAVQQVLSWYAAL 220 ++APL+PAE A LDTSDMT D+AV QVL W+AA+ Sbjct: 184 TAAPLRPAEDAKLLDTSDMTVDQAVAQVLEWFAAV 218 >ref|YP_004684652.1| cytidylate kinase Cmk [Cupriavidus necator N-1] gb|AEI76171.1| cytidylate kinase Cmk [Cupriavidus necator N-1] Length = 222 Score = 275 bits (702), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 146/215 (67%), Positives = 162/215 (75%) Query: 6 IPVITIDGPTASGKGTVAQKVAQQLGFHYLDSGALYRLTALSVLRRGIALNDEHALAKAA 65 + VI IDGPTASGKGTVA KVA +GFH LDSGALYRL AL+ R GI L D ALAK A Sbjct: 4 VNVIAIDGPTASGKGTVAHKVADAVGFHLLDSGALYRLVALASDRAGIDLADVDALAKIA 63 Query: 66 EHLHCHFDGAHIFLSNEDVTQAIRAEEVGNTASKIAALITVRQALYGLQLSFRKPPGLVA 125 L F ++L E+V+ AIRAE +GN AS IA VR AL LQ SFRK PGLVA Sbjct: 64 SRLDVKFGPDRVWLQGEEVSLAIRAEAIGNRASAIAVHQPVRDALTQLQRSFRKLPGLVA 123 Query: 126 DGRDMGTVIFPGARLKVFLTASVEARATRRYKQLIDKGFSANIEDLSRDLKERDERDMSR 185 DGRDMGTVIFP A LKVFLTASVEARA RRYKQLIDKG SANIEDL RDL+ RD RD +R Sbjct: 124 DGRDMGTVIFPDAPLKVFLTASVEARARRRYKQLIDKGISANIEDLLRDLEARDVRDRTR 183 Query: 186 SSAPLKPAEGAYHLDTSDMTADEAVQQVLSWYAAL 220 ++APL+PAE A LDTSDMT D+AV QVL W+AA+ Sbjct: 184 TAAPLRPAEDAKLLDTSDMTVDQAVAQVLEWFAAV 218 >ref|YP_296775.1| cytidylate kinase [Ralstonia eutropha JMP134] sp|Q46Y52.1|KCY_RALEJ RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine monophosphate kinase; Short=CMP kinase gb|AAZ61931.1| cytidylate kinase [Ralstonia eutropha JMP134] Length = 221 Score = 273 bits (699), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 143/215 (66%), Positives = 163/215 (75%) Query: 6 IPVITIDGPTASGKGTVAQKVAQQLGFHYLDSGALYRLTALSVLRRGIALNDEHALAKAA 65 + VITIDGPTASGKGTVA KVA +G+H LDSGALYRL AL+ R G+ + D LAK A Sbjct: 4 VHVITIDGPTASGKGTVAHKVADAVGYHLLDSGALYRLVALASDRIGVDIEDVDGLAKTA 63 Query: 66 EHLHCHFDGAHIFLSNEDVTQAIRAEEVGNTASKIAALITVRQALYGLQLSFRKPPGLVA 125 L F ++LS E+V+ AIRAE +GN AS IA VR AL LQ FRK PGLVA Sbjct: 64 SRLDVKFGPDRVWLSGEEVSLAIRAEAIGNRASAIAVHQPVRDALTKLQRDFRKLPGLVA 123 Query: 126 DGRDMGTVIFPGARLKVFLTASVEARATRRYKQLIDKGFSANIEDLSRDLKERDERDMSR 185 DGRDMGTVIFP A+LKVFLTASVEARA RRYKQLIDKG SANIEDL RDL+ RD RD +R Sbjct: 124 DGRDMGTVIFPDAQLKVFLTASVEARARRRYKQLIDKGISANIEDLLRDLEARDARDRNR 183 Query: 186 SSAPLKPAEGAYHLDTSDMTADEAVQQVLSWYAAL 220 ++APL+PAE A LDTSDMT D+AV QVL W+AA+ Sbjct: 184 AAAPLRPAEDAKLLDTSDMTVDQAVAQVLEWFAAV 218 >ref|YP_002004819.1| cytidylate kinase [Cupriavidus taiwanensis LMG 19424] sp|B3R370.1|KCY_CUPTR RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine monophosphate kinase; Short=CMP kinase emb|CAQ68750.1| cytidine monophosphate (CMP) kinase [Cupriavidus taiwanensis LMG 19424] Length = 222 Score = 273 bits (699), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 143/215 (66%), Positives = 163/215 (75%) Query: 6 IPVITIDGPTASGKGTVAQKVAQQLGFHYLDSGALYRLTALSVLRRGIALNDEHALAKAA 65 + VITIDGPTASGKGTVA KVA +GFH LDSGALYRL AL+ R G+ L D +L + A Sbjct: 4 VNVITIDGPTASGKGTVAHKVADAVGFHLLDSGALYRLVALASDRAGVDLADIDSLTRIA 63 Query: 66 EHLHCHFDGAHIFLSNEDVTQAIRAEEVGNTASKIAALITVRQALYGLQLSFRKPPGLVA 125 L F ++L E+V+ AIRAE +GN AS IA VR AL LQ SFRK PGLVA Sbjct: 64 SRLDVKFGPDRVWLQGEEVSLAIRAEAIGNRASAIAVHQPVRDALTQLQRSFRKLPGLVA 123 Query: 126 DGRDMGTVIFPGARLKVFLTASVEARATRRYKQLIDKGFSANIEDLSRDLKERDERDMSR 185 DGRDMGTVIFP A+LKVFLTASVEARA RRYKQLIDKG SANIEDL RDL+ RD RD +R Sbjct: 124 DGRDMGTVIFPDAQLKVFLTASVEARARRRYKQLIDKGISANIEDLLRDLEARDARDRTR 183 Query: 186 SSAPLKPAEGAYHLDTSDMTADEAVQQVLSWYAAL 220 ++APL+PAE A LDTSDMT D+AV QVL W+AA+ Sbjct: 184 AAAPLRPAEDAKLLDTSDMTVDQAVAQVLEWFAAV 218