BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0036.0111.p (881 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777081.1| DNA gyrase subunit A protein [Herbaspirillum... 1807 0.0 ref|YP_004754403.1| topoisomerase type IIAa [Collimonas fungivor... 1668 0.0 ref|ZP_08272599.1| DNA gyrase subunit A [Oxalobacteraceae bacter... 1646 0.0 ref|YP_001100824.1| DNA gyrase subunit A [Herminiimonas arsenico... 1645 0.0 ref|YP_001354365.1| DNA gyrase subunit A [Janthinobacterium sp. ... 1644 0.0 ref|ZP_04578074.1| DNA gyrase subunit A [Oxalobacter formigenes ... 1548 0.0 ref|ZP_04577986.1| DNA gyrase subunit A [Oxalobacter formigenes ... 1532 0.0 ref|YP_003746361.1| DNA gyrase subunit A [Ralstonia solanacearum... 1460 0.0 gb|AEG69754.1| DNA gyrase subunit A [Ralstonia solanacearum Po82] 1457 0.0 ref|YP_003753116.1| DNA gyrase, subunit A, type II topoisomerase... 1455 0.0 >ref|YP_003777081.1| DNA gyrase subunit A protein [Herbaspirillum seropedicae SmR1] gb|ADJ65173.1| DNA gyrase subunit A protein [Herbaspirillum seropedicae SmR1] Length = 881 Score = 1807 bits (4680), Expect = 0.0, Method: Compositional matrix adjust. Identities = 881/881 (100%), Positives = 881/881 (100%) Query: 1 MDQFAKETIPISLEEEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHEMNNVWN 60 MDQFAKETIPISLEEEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHEMNNVWN Sbjct: 1 MDQFAKETIPISLEEEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHEMNNVWN 60 Query: 61 RPFVKCARVVGEVMGKYHPHGDASIYDTLVRMAQDFSLRYTLVDGQGNFGSIDGDGAAAM 120 RPFVKCARVVGEVMGKYHPHGDASIYDTLVRMAQDFSLRYTLVDGQGNFGSIDGDGAAAM Sbjct: 61 RPFVKCARVVGEVMGKYHPHGDASIYDTLVRMAQDFSLRYTLVDGQGNFGSIDGDGAAAM 120 Query: 121 RYTECRLDKISNELLADIEKETVDFVPNYDGKEKEPSVLPTRIPNLLVNGSSGIAVGMAT 180 RYTECRLDKISNELLADIEKETVDFVPNYDGKEKEPSVLPTRIPNLLVNGSSGIAVGMAT Sbjct: 121 RYTECRLDKISNELLADIEKETVDFVPNYDGKEKEPSVLPTRIPNLLVNGSSGIAVGMAT 180 Query: 181 NIPPHNITEVINGALHLLANEQCTIDELIELVPAPDFPTGGIIYGVSGVRDGYRTGRGRV 240 NIPPHNITEVINGALHLLANEQCTIDELIELVPAPDFPTGGIIYGVSGVRDGYRTGRGRV Sbjct: 181 NIPPHNITEVINGALHLLANEQCTIDELIELVPAPDFPTGGIIYGVSGVRDGYRTGRGRV 240 Query: 241 VMRAKTHFEEYGREGRIAIIVDELPYQVNKKALLERIAELVRDKKLEGISDLRDESDKSG 300 VMRAKTHFEEYGREGRIAIIVDELPYQVNKKALLERIAELVRDKKLEGISDLRDESDKSG Sbjct: 241 VMRAKTHFEEYGREGRIAIIVDELPYQVNKKALLERIAELVRDKKLEGISDLRDESDKSG 300 Query: 301 MRVVIELKRGEVPEVVLNNLYKQTQLQDTFGMNMVALVDGQPRLLNLKQLLECFLSHRRE 360 MRVVIELKRGEVPEVVLNNLYKQTQLQDTFGMNMVALVDGQPRLLNLKQLLECFLSHRRE Sbjct: 301 MRVVIELKRGEVPEVVLNNLYKQTQLQDTFGMNMVALVDGQPRLLNLKQLLECFLSHRRE 360 Query: 361 VVTRRTVFELRKARERGHVLEGLAVALANIDDFIAIIRAAPTPPIAKAELMSRAWDSSMV 420 VVTRRTVFELRKARERGHVLEGLAVALANIDDFIAIIRAAPTPPIAKAELMSRAWDSSMV Sbjct: 361 VVTRRTVFELRKARERGHVLEGLAVALANIDDFIAIIRAAPTPPIAKAELMSRAWDSSMV 420 Query: 421 REMLARAGEANEGGIEAFRPESLPAHYGIQSDGLYKLSDEQAQEILQMRLQRLTGLEQDK 480 REMLARAGEANEGGIEAFRPESLPAHYGIQSDGLYKLSDEQAQEILQMRLQRLTGLEQDK Sbjct: 421 REMLARAGEANEGGIEAFRPESLPAHYGIQSDGLYKLSDEQAQEILQMRLQRLTGLEQDK 480 Query: 481 IVNEYKDVMAQIADLLDILAKPARVTAIITDELNAAKNDFGIGAKDERRSTIEHNATDLA 540 IVNEYKDVMAQIADLLDILAKPARVTAIITDELNAAKNDFGIGAKDERRSTIEHNATDLA Sbjct: 481 IVNEYKDVMAQIADLLDILAKPARVTAIITDELNAAKNDFGIGAKDERRSTIEHNATDLA 540 Query: 541 TEDLITPQDMVVTLSHTGYMKSQPVSEYRAQKRGGRGKQAMATKDDDWIDQLFIANTHDY 600 TEDLITPQDMVVTLSHTGYMKSQPVSEYRAQKRGGRGKQAMATKDDDWIDQLFIANTHDY Sbjct: 541 TEDLITPQDMVVTLSHTGYMKSQPVSEYRAQKRGGRGKQAMATKDDDWIDQLFIANTHDY 600 Query: 601 ILCFSNRGRLYWLKVWEVPQGSRNSRGKPIVNMFPLQDGEKITVILPVSGANRSFPDDRY 660 ILCFSNRGRLYWLKVWEVPQGSRNSRGKPIVNMFPLQDGEKITVILPVSGANRSFPDDRY Sbjct: 601 ILCFSNRGRLYWLKVWEVPQGSRNSRGKPIVNMFPLQDGEKITVILPVSGANRSFPDDRY 660 Query: 661 VFMATSLGTVKKTPLSDFSNPRKAGIIAVDLDEGDFLIGAALTDGQHDVMLFSDGGKAVR 720 VFMATSLGTVKKTPLSDFSNPRKAGIIAVDLDEGDFLIGAALTDGQHDVMLFSDGGKAVR Sbjct: 661 VFMATSLGTVKKTPLSDFSNPRKAGIIAVDLDEGDFLIGAALTDGQHDVMLFSDGGKAVR 720 Query: 721 FDENDVRPMGRTARGVRGMNLEETQQVIALLVAENEQQSVLTATENGFGKRTPITEYTRH 780 FDENDVRPMGRTARGVRGMNLEETQQVIALLVAENEQQSVLTATENGFGKRTPITEYTRH Sbjct: 721 FDENDVRPMGRTARGVRGMNLEETQQVIALLVAENEQQSVLTATENGFGKRTPITEYTRH 780 Query: 781 GRGTKGMIAIQTSERNGKVVAATLVDSTDEIMLITTGGVLIRTRVSEIREMGRATQGVTL 840 GRGTKGMIAIQTSERNGKVVAATLVDSTDEIMLITTGGVLIRTRVSEIREMGRATQGVTL Sbjct: 781 GRGTKGMIAIQTSERNGKVVAATLVDSTDEIMLITTGGVLIRTRVSEIREMGRATQGVTL 840 Query: 841 IAVEDGTKLSGLQRVVESDVEDAVEGDNAEGAGSEAPAAGE 881 IAVEDGTKLSGLQRVVESDVEDAVEGDNAEGAGSEAPAAGE Sbjct: 841 IAVEDGTKLSGLQRVVESDVEDAVEGDNAEGAGSEAPAAGE 881 >ref|YP_004754403.1| topoisomerase type IIAa [Collimonas fungivorans Ter331] gb|AEK63580.1| topoisomerase type IIAa [Collimonas fungivorans Ter331] Length = 888 Score = 1668 bits (4320), Expect = 0.0, Method: Compositional matrix adjust. Identities = 803/887 (90%), Positives = 846/887 (95%), Gaps = 8/887 (0%) Query: 1 MDQFAKETIPISLEEEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHEMNNVWN 60 MDQFAKETIPISLEEEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHEMNNVWN Sbjct: 1 MDQFAKETIPISLEEEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNVWN 60 Query: 61 RPFVKCARVVGEVMGKYHPHGDASIYDTLVRMAQDFSLRYTLVDGQGNFGSIDGDGAAAM 120 RPFVKCARVVGE MGKYHPHGDASIYDTLVRMAQ FSLRY LVDGQGNFGSIDGDGAAAM Sbjct: 61 RPFVKCARVVGETMGKYHPHGDASIYDTLVRMAQPFSLRYMLVDGQGNFGSIDGDGAAAM 120 Query: 121 RYTECRLDKISNELLADIEKETVDFVPNYDGKEKEPSVLPTRIPNLLVNGSSGIAVGMAT 180 RYTECRLDKI+ ELLAD++KETVDFVPNYDGKEKEPSVLPTRIPNLL+NGSSGIAVGMAT Sbjct: 121 RYTECRLDKIAGELLADLDKETVDFVPNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180 Query: 181 NIPPHNITEVINGALHLLANEQCTIDELIELVPAPDFPTGGIIYGVSGVRDGYRTGRGRV 240 NIPPHN+TEVI+GALH+L N CTIDELIE++PAPDFPT GIIYGVSGVRDGYRTGRGRV Sbjct: 181 NIPPHNLTEVIDGALHVLRNADCTIDELIEIIPAPDFPTAGIIYGVSGVRDGYRTGRGRV 240 Query: 241 VMRAKTHFEEYGREGRIAIIVDELPYQVNKKALLERIAELVRDKKLEGISDLRDESDKSG 300 VMRAKTHFEE+GREGR AII+DELPYQVNKKALLERIAELVRDKKLEGISDLRDESDKSG Sbjct: 241 VMRAKTHFEEFGREGRTAIIIDELPYQVNKKALLERIAELVRDKKLEGISDLRDESDKSG 300 Query: 301 MRVVIELKRGEVPEVVLNNLYKQTQLQDTFGMNMVALVDGQPRLLNLKQLLECFLSHRRE 360 MRVVIELKRGEV EVVLNNLYKQTQLQDTFGMNMVALVDGQP+LLNLKQ+LECFLSHRRE Sbjct: 301 MRVVIELKRGEVAEVVLNNLYKQTQLQDTFGMNMVALVDGQPKLLNLKQMLECFLSHRRE 360 Query: 361 VVTRRTVFELRKARERGHVLEGLAVALANIDDFIAIIRAAPTPPIAKAELMSRAWDSSMV 420 VVTRRTVFELRKARERGHVLEGLAVALANIDDFIA+I+AAPTPP+AK+ELM+RAWDSSMV Sbjct: 361 VVTRRTVFELRKARERGHVLEGLAVALANIDDFIALIKAAPTPPVAKSELMARAWDSSMV 420 Query: 421 REMLARAGEANEGGIEAFRPESLPAHYGIQSDGLYKLSDEQAQEILQMRLQRLTGLEQDK 480 REMLAR GE N GG+EAFRPE+LP HYGIQ+DG+Y+LSD+QAQEILQMRLQRLTGLEQDK Sbjct: 421 REMLARTGEENLGGVEAFRPENLPKHYGIQADGMYRLSDDQAQEILQMRLQRLTGLEQDK 480 Query: 481 IVNEYKDVMAQIADLLDILAKPARVTAIITDELNAAKNDFGIGAKDERRSTIEHNATDLA 540 IVNEYK+VMAQIADLLDILAKP RVT IITDE+ AAKN++GIG KDERRS IEHN TDL Sbjct: 481 IVNEYKEVMAQIADLLDILAKPERVTVIITDEMTAAKNEYGIGNKDERRSQIEHNPTDLG 540 Query: 541 TEDLITPQDMVVTLSHTGYMKSQPVSEYRAQKRGGRGKQAMATKDDDWIDQLFIANTHDY 600 TEDLITPQDMVVTLSHTGYMK+QPVSEYRAQKRGGRGKQAMATK+DDWIDQLF+ NTHDY Sbjct: 541 TEDLITPQDMVVTLSHTGYMKAQPVSEYRAQKRGGRGKQAMATKEDDWIDQLFVGNTHDY 600 Query: 601 ILCFSNRGRLYWLKVWEVPQGSRNSRGKPIVNMFPLQDGEKITVILPVSGANRSFPDDRY 660 ILCFSNRGRLYWLK+WEVPQGSRNSRGKPIVNMFPLQDGEKITV+LP+SGANRSFP+DRY Sbjct: 601 ILCFSNRGRLYWLKIWEVPQGSRNSRGKPIVNMFPLQDGEKITVVLPLSGANRSFPEDRY 660 Query: 661 VFMATSLGTVKKTPLSDFSNPRKAGIIAVDLDEGDFLIGAALTDGQHDVMLFSDGGKAVR 720 VFM+TSLGTVKKTPLSDFSNPRKAGIIAVDLDEGDFLIGAALTDGQHDVMLFSD GKAVR Sbjct: 661 VFMSTSLGTVKKTPLSDFSNPRKAGIIAVDLDEGDFLIGAALTDGQHDVMLFSDSGKAVR 720 Query: 721 FDENDVRPMGRTARGVRGMNLEETQQVIALLVAENEQQSVLTATENGFGKRTPITEYTRH 780 FDENDVRPMGRTARGVRGMNLEE QQVIALLVAENEQQSVLTATENGFGKRTPITEYTRH Sbjct: 721 FDENDVRPMGRTARGVRGMNLEEGQQVIALLVAENEQQSVLTATENGFGKRTPITEYTRH 780 Query: 781 GRGTKGMIAIQTSERNGKVVAATLVDSTDEIMLITTGGVLIRTRVSEIREMGRATQGVTL 840 GRGTKGMIAIQTSERNGKVVAATLV+ +DEI+LITTGGVLIRTRV+EIREMGRATQGVTL Sbjct: 781 GRGTKGMIAIQTSERNGKVVAATLVEPSDEIILITTGGVLIRTRVAEIREMGRATQGVTL 840 Query: 841 IAVEDGTKLSGLQRVVESD------VEDAVEGDNAEGAGSEA--PAA 879 IAVEDGTKLSGLQRVVESD VE + EGD A +A PAA Sbjct: 841 IAVEDGTKLSGLQRVVESDAEVDAEVEASAEGDTGSTAAGDASEPAA 887 >ref|ZP_08272599.1| DNA gyrase subunit A [Oxalobacteraceae bacterium IMCC9480] gb|EGF33929.1| DNA gyrase subunit A [Oxalobacteraceae bacterium IMCC9480] Length = 884 Score = 1646 bits (4262), Expect = 0.0, Method: Compositional matrix adjust. Identities = 791/878 (90%), Positives = 840/878 (95%), Gaps = 4/878 (0%) Query: 1 MDQFAKETIPISLEEEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHEMNNVWN 60 MDQFAKETIPISLE+EMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHEMNNVWN Sbjct: 1 MDQFAKETIPISLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNVWN 60 Query: 61 RPFVKCARVVGEVMGKYHPHGDASIYDTLVRMAQDFSLRYTLVDGQGNFGSIDGDGAAAM 120 RP+VKCARVVGEVMGKYHPHGD SIYDTLVRMAQDFSLRYTLVDGQGNFGS+DGD AAAM Sbjct: 61 RPYVKCARVVGEVMGKYHPHGDQSIYDTLVRMAQDFSLRYTLVDGQGNFGSVDGDNAAAM 120 Query: 121 RYTECRLDKISNELLADIEKETVDFVPNYDGKEKEPSVLPTRIPNLLVNGSSGIAVGMAT 180 RYTECRLDKI+NE+LADI+K+TVDFVPNYDGKEKEP+VLPTRIPNLL+NG+SGIAVGMAT Sbjct: 121 RYTECRLDKIANEILADIDKDTVDFVPNYDGKEKEPTVLPTRIPNLLINGASGIAVGMAT 180 Query: 181 NIPPHNITEVINGALHLLANEQCTIDELIELVPAPDFPTGGIIYGVSGVRDGYRTGRGRV 240 NIPPHNITEVI+GALH+L N CTIDELIE++PAPDFPT GIIYGVSGVRDGYRTGRGR+ Sbjct: 181 NIPPHNITEVIDGALHVLRNADCTIDELIEIIPAPDFPTAGIIYGVSGVRDGYRTGRGRI 240 Query: 241 VMRAKTHFEEYGREGRIAIIVDELPYQVNKKALLERIAELVRDKKLEGISDLRDESDKSG 300 VMRAKTHFEEYG+E R AIIVDELPYQVNKK+LLERIAELVRDKKL+GISD+RDESDKSG Sbjct: 241 VMRAKTHFEEYGKESRTAIIVDELPYQVNKKSLLERIAELVRDKKLDGISDIRDESDKSG 300 Query: 301 MRVVIELKRGEVPEVVLNNLYKQTQLQDTFGMNMVALVDGQPRLLNLKQLLECFLSHRRE 360 MRVVIELKR EVPEVVLNNLYKQTQLQDTFGMNMVALVDGQP+LLNLKQ+L+CFLSHRRE Sbjct: 301 MRVVIELKRAEVPEVVLNNLYKQTQLQDTFGMNMVALVDGQPKLLNLKQMLQCFLSHRRE 360 Query: 361 VVTRRTVFELRKARERGHVLEGLAVALANIDDFIAIIRAAPTPPIAKAELMSRAWDSSMV 420 VVTRRT+FELR+ARERGHVLEGLAVALANIDDFIAII+AAPTPPIAK ELM+RAWDSS+V Sbjct: 361 VVTRRTIFELRRARERGHVLEGLAVALANIDDFIAIIKAAPTPPIAKVELMARAWDSSVV 420 Query: 421 REMLARAGEANEGGIEAFRPESLPAHYGIQSDGLYKLSDEQAQEILQMRLQRLTGLEQDK 480 REML R GE GGI AFRPE+LP HYGIQ DGLYKLSD+QAQEILQMRLQRLTGLEQDK Sbjct: 421 REMLVRTGEEALGGINAFRPENLPKHYGIQPDGLYKLSDDQAQEILQMRLQRLTGLEQDK 480 Query: 481 IVNEYKDVMAQIADLLDILAKPARVTAIITDELNAAKNDFGIGAKDERRSTIEHNATDLA 540 IVNEYK+VMAQIADLLDIL+KP RVT II DEL AAK ++GIG KDERRS IEHNATDL Sbjct: 481 IVNEYKEVMAQIADLLDILSKPERVTIIIVDELTAAKMEYGIGNKDERRSYIEHNATDLG 540 Query: 541 TEDLITPQDMVVTLSHTGYMKSQPVSEYRAQKRGGRGKQAMATKDDDWIDQLFIANTHDY 600 TEDLITPQDMVVTLSHTGYMKSQP+SEYR+QKRGGRGKQAMATKDDDWIDQLFIANTHDY Sbjct: 541 TEDLITPQDMVVTLSHTGYMKSQPISEYRSQKRGGRGKQAMATKDDDWIDQLFIANTHDY 600 Query: 601 ILCFSNRGRLYWLKVWEVPQGSRNSRGKPIVNMFPLQDGEKITVILPVSGANRSFPDDRY 660 ILCFSNRGRLYWLKVWEVPQGSRNSRGKPIVNMFPL DGEK+TVILPVSG NRSFP+DRY Sbjct: 601 ILCFSNRGRLYWLKVWEVPQGSRNSRGKPIVNMFPLLDGEKVTVILPVSGDNRSFPEDRY 660 Query: 661 VFMATSLGTVKKTPLSDFSNPRKAGIIAVDLDEGDFLIGAALTDGQHDVMLFSDGGKAVR 720 +FM+TSLGTVKKTPLSDFSNPRKAGIIAVDLDEGDFLIGAALTDGQHDVMLFSD GKAVR Sbjct: 661 IFMSTSLGTVKKTPLSDFSNPRKAGIIAVDLDEGDFLIGAALTDGQHDVMLFSDSGKAVR 720 Query: 721 FDENDVRPMGRTARGVRGMNLEETQQVIALLVAENEQQSVLTATENGFGKRTPITEYTRH 780 FDENDVRPMGRTARGVRGMNLEE QQVIALLVAENEQQSVLTATENG+GKRTPITEYTRH Sbjct: 721 FDENDVRPMGRTARGVRGMNLEEGQQVIALLVAENEQQSVLTATENGYGKRTPITEYTRH 780 Query: 781 GRGTKGMIAIQTSERNGKVVAATLVDSTDEIMLITTGGVLIRTRVSEIREMGRATQGVTL 840 GRGTKGMIAIQTSERNG+VVAATLV+ +DEIMLITTGGVLIRTRV+EIREMGRATQGVTL Sbjct: 781 GRGTKGMIAIQTSERNGRVVAATLVEPSDEIMLITTGGVLIRTRVAEIREMGRATQGVTL 840 Query: 841 IAVEDGTKLSGLQRVVESDVEDAVEGDNAEGAGSEAPA 878 IAVEDGTKLSGLQR+VE DVE EGD+A A ++APA Sbjct: 841 IAVEDGTKLSGLQRIVEPDVE---EGDDAVDA-TDAPA 874 >ref|YP_001100824.1| DNA gyrase subunit A [Herminiimonas arsenicoxydans] emb|CAL62703.1| DNA gyrase subunit A [Herminiimonas arsenicoxydans] Length = 871 Score = 1645 bits (4260), Expect = 0.0, Method: Compositional matrix adjust. Identities = 787/866 (90%), Positives = 832/866 (96%) Query: 1 MDQFAKETIPISLEEEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHEMNNVWN 60 MDQFAKETIPISLEEEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHEMNNVWN Sbjct: 1 MDQFAKETIPISLEEEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNVWN 60 Query: 61 RPFVKCARVVGEVMGKYHPHGDASIYDTLVRMAQDFSLRYTLVDGQGNFGSIDGDGAAAM 120 RPFVKCARVVGE MGKYHPHGDASIYDTLVRMAQ FSLRY LVDGQGNFGSIDGD AAAM Sbjct: 61 RPFVKCARVVGETMGKYHPHGDASIYDTLVRMAQPFSLRYMLVDGQGNFGSIDGDNAAAM 120 Query: 121 RYTECRLDKISNELLADIEKETVDFVPNYDGKEKEPSVLPTRIPNLLVNGSSGIAVGMAT 180 RYTECRLDKI+ ELLAD++KETVDFVPNYDGKE+EPSVLPTRIPNLL+NGSSGIAVGMAT Sbjct: 121 RYTECRLDKIAGELLADLDKETVDFVPNYDGKEREPSVLPTRIPNLLINGSSGIAVGMAT 180 Query: 181 NIPPHNITEVINGALHLLANEQCTIDELIELVPAPDFPTGGIIYGVSGVRDGYRTGRGRV 240 NIPPHNITEVI+GALH+L N + TIDELIE++PAPDFPTGGIIYGVSGVRDGYRTGRGRV Sbjct: 181 NIPPHNITEVIDGALHVLRNAEATIDELIEIIPAPDFPTGGIIYGVSGVRDGYRTGRGRV 240 Query: 241 VMRAKTHFEEYGREGRIAIIVDELPYQVNKKALLERIAELVRDKKLEGISDLRDESDKSG 300 VMRAKTHFEEYG+E R AIIVDELPYQVNKK+LLERIAELVRDKKLEGISD+RDESDKSG Sbjct: 241 VMRAKTHFEEYGKENRSAIIVDELPYQVNKKSLLERIAELVRDKKLEGISDIRDESDKSG 300 Query: 301 MRVVIELKRGEVPEVVLNNLYKQTQLQDTFGMNMVALVDGQPRLLNLKQLLECFLSHRRE 360 MRVVIELKR EVPEVVLNNLYKQTQLQDTFGMNMVALVDGQP+LLNLKQ+LECFLSHRRE Sbjct: 301 MRVVIELKRNEVPEVVLNNLYKQTQLQDTFGMNMVALVDGQPKLLNLKQMLECFLSHRRE 360 Query: 361 VVTRRTVFELRKARERGHVLEGLAVALANIDDFIAIIRAAPTPPIAKAELMSRAWDSSMV 420 VVTRRT+FELRKARERGHVLEGLAVALANIDDFIAII+AAPTPP+AK +LMSRAWDSS+V Sbjct: 361 VVTRRTIFELRKARERGHVLEGLAVALANIDDFIAIIKAAPTPPVAKVDLMSRAWDSSVV 420 Query: 421 REMLARAGEANEGGIEAFRPESLPAHYGIQSDGLYKLSDEQAQEILQMRLQRLTGLEQDK 480 REMLAR GE GG+ AFRPE+LP HYGIQ DGLYKLSD+QAQEILQMRLQRLTGLEQDK Sbjct: 421 REMLARTGEEGVGGVNAFRPENLPKHYGIQPDGLYKLSDDQAQEILQMRLQRLTGLEQDK 480 Query: 481 IVNEYKDVMAQIADLLDILAKPARVTAIITDELNAAKNDFGIGAKDERRSTIEHNATDLA 540 IVNEYK+VM+QIADLLDILAKP RVT IITDEL AKN++GIG KDERRS+IE NATDL Sbjct: 481 IVNEYKEVMSQIADLLDILAKPERVTVIITDELTVAKNEYGIGNKDERRSSIELNATDLG 540 Query: 541 TEDLITPQDMVVTLSHTGYMKSQPVSEYRAQKRGGRGKQAMATKDDDWIDQLFIANTHDY 600 TEDLITPQDMVVTLSHTGYMKSQP++EYRAQKRGGRGKQAMATK+DDWIDQLFIANTHDY Sbjct: 541 TEDLITPQDMVVTLSHTGYMKSQPITEYRAQKRGGRGKQAMATKEDDWIDQLFIANTHDY 600 Query: 601 ILCFSNRGRLYWLKVWEVPQGSRNSRGKPIVNMFPLQDGEKITVILPVSGANRSFPDDRY 660 ILCFSNRGR+YWLKVWEVPQGSRNSRGKPIVNMFPLQDGEKITVILPVSG NR+FP+DRY Sbjct: 601 ILCFSNRGRMYWLKVWEVPQGSRNSRGKPIVNMFPLQDGEKITVILPVSGENRTFPEDRY 660 Query: 661 VFMATSLGTVKKTPLSDFSNPRKAGIIAVDLDEGDFLIGAALTDGQHDVMLFSDGGKAVR 720 +FM+TSLGTVKKT LSDFSNPRKAGIIAVDLD+GDFLIGAALTDG+HDVMLFSD GKAVR Sbjct: 661 IFMSTSLGTVKKTSLSDFSNPRKAGIIAVDLDDGDFLIGAALTDGKHDVMLFSDSGKAVR 720 Query: 721 FDENDVRPMGRTARGVRGMNLEETQQVIALLVAENEQQSVLTATENGFGKRTPITEYTRH 780 FDENDVRPMGRTARGVRGMNLEE QQVIALLVAENEQQSVLTATENGFGKRTPITEYTRH Sbjct: 721 FDENDVRPMGRTARGVRGMNLEEGQQVIALLVAENEQQSVLTATENGFGKRTPITEYTRH 780 Query: 781 GRGTKGMIAIQTSERNGKVVAATLVDSTDEIMLITTGGVLIRTRVSEIREMGRATQGVTL 840 GRGTKGMIAIQTSERNGKVVAATLVD+ DEIMLITTGGVLIRTRV+EIREMGRATQGVTL Sbjct: 781 GRGTKGMIAIQTSERNGKVVAATLVDAADEIMLITTGGVLIRTRVAEIREMGRATQGVTL 840 Query: 841 IAVEDGTKLSGLQRVVESDVEDAVEG 866 IAVEDGTKLSGLQR++ESD+E+ G Sbjct: 841 IAVEDGTKLSGLQRILESDIEEDQSG 866 >ref|YP_001354365.1| DNA gyrase subunit A [Janthinobacterium sp. Marseille] gb|ABR89127.1| DNA gyrase subunit A [Janthinobacterium sp. Marseille] Length = 873 Score = 1644 bits (4258), Expect = 0.0, Method: Compositional matrix adjust. Identities = 787/861 (91%), Positives = 829/861 (96%) Query: 1 MDQFAKETIPISLEEEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHEMNNVWN 60 MDQFAKETIPISLEEEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHEMNNVWN Sbjct: 1 MDQFAKETIPISLEEEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNVWN 60 Query: 61 RPFVKCARVVGEVMGKYHPHGDASIYDTLVRMAQDFSLRYTLVDGQGNFGSIDGDGAAAM 120 RPFVKCARVVGE MGKYHPHGDASIYDTLVRMAQ FSLRY LVDGQGNFGSIDGD AAAM Sbjct: 61 RPFVKCARVVGETMGKYHPHGDASIYDTLVRMAQPFSLRYMLVDGQGNFGSIDGDNAAAM 120 Query: 121 RYTECRLDKISNELLADIEKETVDFVPNYDGKEKEPSVLPTRIPNLLVNGSSGIAVGMAT 180 RYTECRLDKI+ ELLAD++KETVDFVPNYDGKEKEPSVLPTRIPNLL+NGSSGIAVGMAT Sbjct: 121 RYTECRLDKIAGELLADLDKETVDFVPNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180 Query: 181 NIPPHNITEVINGALHLLANEQCTIDELIELVPAPDFPTGGIIYGVSGVRDGYRTGRGRV 240 NIPPHNITEVI+GALH+L N T+DELIE++PAPDFPTGGIIYGVSGVRDGYRTGRGRV Sbjct: 181 NIPPHNITEVIDGALHVLRNADATVDELIEIIPAPDFPTGGIIYGVSGVRDGYRTGRGRV 240 Query: 241 VMRAKTHFEEYGREGRIAIIVDELPYQVNKKALLERIAELVRDKKLEGISDLRDESDKSG 300 VMRAKTHFEE+G+E R AIIVDELPYQVNKK+LLERIAELVRDKKL+GISD+RDESDKSG Sbjct: 241 VMRAKTHFEEFGKENRAAIIVDELPYQVNKKSLLERIAELVRDKKLDGISDIRDESDKSG 300 Query: 301 MRVVIELKRGEVPEVVLNNLYKQTQLQDTFGMNMVALVDGQPRLLNLKQLLECFLSHRRE 360 MRVVIELKR EVPEVVLNNLYKQTQLQDTFGMNMVALVDGQP+LLNLKQ+LECFLSHRRE Sbjct: 301 MRVVIELKRNEVPEVVLNNLYKQTQLQDTFGMNMVALVDGQPKLLNLKQMLECFLSHRRE 360 Query: 361 VVTRRTVFELRKARERGHVLEGLAVALANIDDFIAIIRAAPTPPIAKAELMSRAWDSSMV 420 VVTRRT+FELRKARERGHVLEGLAVALANIDDFIAII+AAPTPP+AK +LMSRAWDSS+V Sbjct: 361 VVTRRTIFELRKARERGHVLEGLAVALANIDDFIAIIKAAPTPPVAKVDLMSRAWDSSVV 420 Query: 421 REMLARAGEANEGGIEAFRPESLPAHYGIQSDGLYKLSDEQAQEILQMRLQRLTGLEQDK 480 REMLAR GE GG+ AFRPE+LP HYGIQ+DGLYKLSD+QAQEILQMRLQRLTGLEQDK Sbjct: 421 REMLARTGEEGVGGVNAFRPENLPKHYGIQADGLYKLSDDQAQEILQMRLQRLTGLEQDK 480 Query: 481 IVNEYKDVMAQIADLLDILAKPARVTAIITDELNAAKNDFGIGAKDERRSTIEHNATDLA 540 IVNEYK+VM QIADLLDILAKP RVT IITDEL AKN++GIG KDERRSTIE NATDL Sbjct: 481 IVNEYKEVMEQIADLLDILAKPERVTVIITDELTVAKNEYGIGNKDERRSTIELNATDLG 540 Query: 541 TEDLITPQDMVVTLSHTGYMKSQPVSEYRAQKRGGRGKQAMATKDDDWIDQLFIANTHDY 600 TEDLITPQDMVVTLSHTGYMK+QP+SEYRAQKRGGRGKQAMATKDDDWIDQLFIANTHDY Sbjct: 541 TEDLITPQDMVVTLSHTGYMKAQPISEYRAQKRGGRGKQAMATKDDDWIDQLFIANTHDY 600 Query: 601 ILCFSNRGRLYWLKVWEVPQGSRNSRGKPIVNMFPLQDGEKITVILPVSGANRSFPDDRY 660 ILCFSNRGRLYWLKVWEVPQGSRNSRGKPIVNMFPLQDGEKITVILP+SG NR+FP+D Y Sbjct: 601 ILCFSNRGRLYWLKVWEVPQGSRNSRGKPIVNMFPLQDGEKITVILPISGENRTFPEDHY 660 Query: 661 VFMATSLGTVKKTPLSDFSNPRKAGIIAVDLDEGDFLIGAALTDGQHDVMLFSDGGKAVR 720 +FMATSLGTVKKT LSDFSNPRKAGIIAVDLD+GDFLIGAALTDG+HDVMLFSD GKAVR Sbjct: 661 IFMATSLGTVKKTSLSDFSNPRKAGIIAVDLDDGDFLIGAALTDGKHDVMLFSDSGKAVR 720 Query: 721 FDENDVRPMGRTARGVRGMNLEETQQVIALLVAENEQQSVLTATENGFGKRTPITEYTRH 780 FDENDVRPMGRTARGVRGMNLEE QQVIALLVAENEQQSVLTATENGFGKRTPITEYTRH Sbjct: 721 FDENDVRPMGRTARGVRGMNLEEGQQVIALLVAENEQQSVLTATENGFGKRTPITEYTRH 780 Query: 781 GRGTKGMIAIQTSERNGKVVAATLVDSTDEIMLITTGGVLIRTRVSEIREMGRATQGVTL 840 GRGTKGMIAIQTSERNGKVVAATLVD++DEIMLITTGGVLIRTRV+EIREMGRATQGVTL Sbjct: 781 GRGTKGMIAIQTSERNGKVVAATLVDASDEIMLITTGGVLIRTRVAEIREMGRATQGVTL 840 Query: 841 IAVEDGTKLSGLQRVVESDVE 861 IAVEDGTKLSGLQR++ESDVE Sbjct: 841 IAVEDGTKLSGLQRILESDVE 861 >ref|ZP_04578074.1| DNA gyrase subunit A [Oxalobacter formigenes OXCC13] gb|EEO29047.1| DNA gyrase subunit A [Oxalobacter formigenes OXCC13] Length = 877 Score = 1548 bits (4007), Expect = 0.0, Method: Compositional matrix adjust. Identities = 744/875 (85%), Positives = 804/875 (91%), Gaps = 2/875 (0%) Query: 1 MDQFAKETIPISLEEEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHEMNNVWN 60 MDQFAKETI ISLE+EMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+ MHEMNN WN Sbjct: 1 MDQFAKETISISLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFGMHEMNNAWN 60 Query: 61 RPFVKCARVVGEVMGKYHPHGDASIYDTLVRMAQDFSLRYTLVDGQGNFGSIDGDGAAAM 120 RP+VKCARVVGEVMGKYHPHGD SIYDTLVRMAQDFSLRYTLVDGQGNFGSIDGD AAAM Sbjct: 61 RPYVKCARVVGEVMGKYHPHGDQSIYDTLVRMAQDFSLRYTLVDGQGNFGSIDGDAAAAM 120 Query: 121 RYTECRLDKISNELLADIEKETVDFVPNYDGKEKEPSVLPTRIPNLLVNGSSGIAVGMAT 180 RYTECRLD+IS E+LADI+KET+DFVPNYDGKEKEPSVLPTRIPNLL+NGSSGIAVGMAT Sbjct: 121 RYTECRLDRISEEMLADIDKETIDFVPNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180 Query: 181 NIPPHNITEVINGALHLLANEQCTIDELIELVPAPDFPTGGIIYGVSGVRDGYRTGRGRV 240 NIPPHN+ EVINGAL LL CTIDELI+++PAPDFPTGGIIYGVSGVR+GYRTGRGRV Sbjct: 181 NIPPHNLVEVINGALQLLHQPDCTIDELIDIIPAPDFPTGGIIYGVSGVREGYRTGRGRV 240 Query: 241 VMRAKTHFEEYGREGRIAIIVDELPYQVNKKALLERIAELVRDKKLEGISDLRDESDKSG 300 VMRAKTHFEEYGREGR AIIVDELPYQVNKK LLERIAE VR+KKL+GISD+RDESDKSG Sbjct: 241 VMRAKTHFEEYGREGRQAIIVDELPYQVNKKNLLERIAESVREKKLDGISDIRDESDKSG 300 Query: 301 MRVVIELKRGEVPEVVLNNLYKQTQLQDTFGMNMVALVDGQPRLLNLKQLLECFLSHRRE 360 MRVVIELKR EVPEVVLNNL+KQTQLQDTFGMNMVALVDGQP+LLNLKQ+LECFL+HRRE Sbjct: 301 MRVVIELKRNEVPEVVLNNLFKQTQLQDTFGMNMVALVDGQPKLLNLKQMLECFLAHRRE 360 Query: 361 VVTRRTVFELRKARERGHVLEGLAVALANIDDFIAIIRAAPTPPIAKAELMSRAWDSSMV 420 VVTRRT+FELRKARERGH+LEGLAVALANIDDFIAIIRAAPTPPIA+ ELMSR+W+SS+V Sbjct: 361 VVTRRTIFELRKARERGHILEGLAVALANIDDFIAIIRAAPTPPIARQELMSRSWNSSLV 420 Query: 421 REMLARAGEANEGGIEAFRPESLPAHYGIQSDGLYKLSDEQAQEILQMRLQRLTGLEQDK 480 + ML R G + ++ FRPE LP +GIQSDGLYKLS+EQA EILQMRLQRLTGLEQDK Sbjct: 421 KSMLERTGADHANSVDDFRPEGLPKMFGIQSDGLYKLSEEQATEILQMRLQRLTGLEQDK 480 Query: 481 IVNEYKDVMAQIADLLDILAKPARVTAIITDELNAAKNDFGIGAKDERRSTIEHNATDLA 540 I+NEY DVMAQIA+LLDILAKP RV AII DEL ++G AKD RRS IE NA+DL Sbjct: 481 ILNEYGDVMAQIAELLDILAKPERVLAIIDDELKQVIGEYGEKAKDVRRSEIELNASDLE 540 Query: 541 TEDLITPQDMVVTLSHTGYMKSQPVSEYRAQKRGGRGKQAMATKDDDWIDQLFIANTHDY 600 TEDLITPQDMVVTLSHTGY KSQP+SEYRAQKRGGRG+ A ATK+DDW+DQLFIANTHDY Sbjct: 541 TEDLITPQDMVVTLSHTGYFKSQPLSEYRAQKRGGRGRMATATKEDDWVDQLFIANTHDY 600 Query: 601 ILCFSNRGRLYWLKVWEVPQGSRNSRGKPIVNMFPLQDGEKITVILPVSGANRSFPDDRY 660 ILCFS+RGR+YWLKVWEVPQGSRNSRGKPIVNMFPLQ EKITVILP+SG NR+FPD+ Y Sbjct: 601 ILCFSDRGRMYWLKVWEVPQGSRNSRGKPIVNMFPLQGDEKITVILPLSGENRNFPDNHY 660 Query: 661 VFMATSLGTVKKTPLSDFSNPRKAGIIAVDLDEGDFLIGAALTDGQHDVMLFSDGGKAVR 720 +FMATS GTVKKT L+DFSNPRKAGIIAV LDEGD+LIGAALTDG+HDVMLFSD GKAVR Sbjct: 661 IFMATSQGTVKKTSLTDFSNPRKAGIIAVGLDEGDYLIGAALTDGKHDVMLFSDAGKAVR 720 Query: 721 FDENDVRPMGRTARGVRGMNLEETQQVIALLVAENEQQSVLTATENGFGKRTPITEYTRH 780 FDENDVRPMGRTARGVRGMNLE+ Q+VIA+LVA +E QSVLTATENGFGKRTPI EYTRH Sbjct: 721 FDENDVRPMGRTARGVRGMNLEDDQKVIAMLVAGDESQSVLTATENGFGKRTPIAEYTRH 780 Query: 781 GRGTKGMIAIQTSERNGKVVAATLVDSTDEIMLITTGGVLIRTRVSEIREMGRATQGVTL 840 GRGTKGMIAIQTSERNGKVVAATLV+ DEIMLITTGGVLIRTRVSE+REMGRATQGVTL Sbjct: 781 GRGTKGMIAIQTSERNGKVVAATLVNENDEIMLITTGGVLIRTRVSEVREMGRATQGVTL 840 Query: 841 IAVEDGTKLSGLQRVVESDVEDAVEGDNAEGAGSE 875 IAVE+GT LSGLQR++ESD+ED E A GSE Sbjct: 841 IAVEEGTTLSGLQRILESDIED--ENPEASEEGSE 873 >ref|ZP_04577986.1| DNA gyrase subunit A [Oxalobacter formigenes HOxBLS] gb|EEO28948.1| DNA gyrase subunit A [Oxalobacter formigenes HOxBLS] Length = 872 Score = 1532 bits (3967), Expect = 0.0, Method: Compositional matrix adjust. Identities = 730/870 (83%), Positives = 801/870 (92%) Query: 1 MDQFAKETIPISLEEEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHEMNNVWN 60 MDQFAKETI ISLE+EMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+ MHEMNN WN Sbjct: 1 MDQFAKETISISLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFGMHEMNNTWN 60 Query: 61 RPFVKCARVVGEVMGKYHPHGDASIYDTLVRMAQDFSLRYTLVDGQGNFGSIDGDGAAAM 120 RP+VKCARVVGEVMGKYHPHGD SIYDTLVRMAQDFSLRYTLVDGQGNFGSIDGD AAAM Sbjct: 61 RPYVKCARVVGEVMGKYHPHGDQSIYDTLVRMAQDFSLRYTLVDGQGNFGSIDGDNAAAM 120 Query: 121 RYTECRLDKISNELLADIEKETVDFVPNYDGKEKEPSVLPTRIPNLLVNGSSGIAVGMAT 180 RYTECRLDKI++E+LADI+KET+DFVPNYDGKEKEPSVLPTRIPNLL+NGSSGIAVGMAT Sbjct: 121 RYTECRLDKIADEMLADIDKETIDFVPNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180 Query: 181 NIPPHNITEVINGALHLLANEQCTIDELIELVPAPDFPTGGIIYGVSGVRDGYRTGRGRV 240 NIPPHN+ EVI G+LHLL + CTIDELI+++PAPDFPTGG+IYGV+GVR+GYRTGRGRV Sbjct: 181 NIPPHNLAEVIRGSLHLLHHPDCTIDELIDIIPAPDFPTGGLIYGVTGVREGYRTGRGRV 240 Query: 241 VMRAKTHFEEYGREGRIAIIVDELPYQVNKKALLERIAELVRDKKLEGISDLRDESDKSG 300 VMRA+THFEE+GR+GR AII+DELPYQVNKK LLERIAE VR+KKL+GISD+RDESDKSG Sbjct: 241 VMRARTHFEEHGRDGRQAIIIDELPYQVNKKTLLERIAESVREKKLDGISDIRDESDKSG 300 Query: 301 MRVVIELKRGEVPEVVLNNLYKQTQLQDTFGMNMVALVDGQPRLLNLKQLLECFLSHRRE 360 MRVVIELKR EV EVVLNNL+KQTQLQDTFGMNMVALVDGQP+LLNLKQ+LECFL+HRRE Sbjct: 301 MRVVIELKRNEVAEVVLNNLFKQTQLQDTFGMNMVALVDGQPKLLNLKQMLECFLAHRRE 360 Query: 361 VVTRRTVFELRKARERGHVLEGLAVALANIDDFIAIIRAAPTPPIAKAELMSRAWDSSMV 420 VVTRRT+FELRKARERGHVLEGLAVALANIDDFIAIIRAAPTPPIA+ ELM+R+WDSS+V Sbjct: 361 VVTRRTIFELRKARERGHVLEGLAVALANIDDFIAIIRAAPTPPIARQELMARSWDSSLV 420 Query: 421 REMLARAGEANEGGIEAFRPESLPAHYGIQSDGLYKLSDEQAQEILQMRLQRLTGLEQDK 480 R ML R G + ++ FRPE LP YGIQSDGLYKLS+EQA EILQMRLQRLTGLEQD+ Sbjct: 421 RSMLERTGNEHTNSVDDFRPEGLPKIYGIQSDGLYKLSEEQATEILQMRLQRLTGLEQDR 480 Query: 481 IVNEYKDVMAQIADLLDILAKPARVTAIITDELNAAKNDFGIGAKDERRSTIEHNATDLA 540 I+NEY DVM QIA+LLDILA+P RV II EL A ++ AKD RRS IE NA+DL Sbjct: 481 ILNEYGDVMRQIAELLDILARPERVLEIIDTELTAVIGEYAEKAKDTRRSEIELNASDLE 540 Query: 541 TEDLITPQDMVVTLSHTGYMKSQPVSEYRAQKRGGRGKQAMATKDDDWIDQLFIANTHDY 600 TEDLITPQDMVVTLSH+GY+KSQP+SEYRAQKRGGRG+QA +TK+DDW+DQLFIANTHDY Sbjct: 541 TEDLITPQDMVVTLSHSGYIKSQPLSEYRAQKRGGRGRQATSTKEDDWVDQLFIANTHDY 600 Query: 601 ILCFSNRGRLYWLKVWEVPQGSRNSRGKPIVNMFPLQDGEKITVILPVSGANRSFPDDRY 660 ILCFS+RGR+YWLKVWEVPQGSRNSRGKPIVNMFPLQ EKITVILP+SG NR+FP++ Y Sbjct: 601 ILCFSDRGRMYWLKVWEVPQGSRNSRGKPIVNMFPLQGEEKITVILPLSGENRNFPENHY 660 Query: 661 VFMATSLGTVKKTPLSDFSNPRKAGIIAVDLDEGDFLIGAALTDGQHDVMLFSDGGKAVR 720 +FMATS GTVKKTPL+DFSNPRKAGIIAV LDEGD+LIGAALTDG HDVMLFSD GKAVR Sbjct: 661 IFMATSQGTVKKTPLTDFSNPRKAGIIAVGLDEGDYLIGAALTDGNHDVMLFSDAGKAVR 720 Query: 721 FDENDVRPMGRTARGVRGMNLEETQQVIALLVAENEQQSVLTATENGFGKRTPITEYTRH 780 FDENDVRPMGRTARGV+GMNLE+ Q+VIALLVA +E QSVLTATENGFGKRTPI EYTRH Sbjct: 721 FDENDVRPMGRTARGVKGMNLEDEQKVIALLVAGDENQSVLTATENGFGKRTPIAEYTRH 780 Query: 781 GRGTKGMIAIQTSERNGKVVAATLVDSTDEIMLITTGGVLIRTRVSEIREMGRATQGVTL 840 GRGTKGMIAIQTSERNGKVVAATLV DEIMLITTGGVLIRTRVSEIREMGRATQGVTL Sbjct: 781 GRGTKGMIAIQTSERNGKVVAATLVSENDEIMLITTGGVLIRTRVSEIREMGRATQGVTL 840 Query: 841 IAVEDGTKLSGLQRVVESDVEDAVEGDNAE 870 I++E+GT LSGLQR++ESD+ED EG E Sbjct: 841 ISIEEGTTLSGLQRILESDIEDVPEGSEEE 870 >ref|YP_003746361.1| DNA gyrase subunit A [Ralstonia solanacearum CFBP2957] emb|CBJ43767.1| DNA gyrase, subunit A, type II topoisomerase [Ralstonia solanacearum CFBP2957] Length = 885 Score = 1460 bits (3780), Expect = 0.0, Method: Compositional matrix adjust. Identities = 712/888 (80%), Positives = 784/888 (88%), Gaps = 17/888 (1%) Query: 1 MDQFAKETIPISLEEEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHEMNNVWN 60 MDQFAKET+P+SLEEEMR SYL YAMSVIVGRALPDVRDGLKPVHRRVLYAMHE+NN WN Sbjct: 1 MDQFAKETLPVSLEEEMRSSYLAYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELNNDWN 60 Query: 61 RPFVKCARVVGEVMGKYHPHGDASIYDTLVRMAQDFSLRYTLVDGQGNFGSIDGDGAAAM 120 RP+ K AR+VG+V+GKYHPHGD+++YDT+VRMAQDFSLRY LVDGQGNFGS+DGD AAAM Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM 120 Query: 121 RYTECRLDKISNELLADIEKETVDFVPNYDGKEKEPSVLPTRIPNLLVNGSSGIAVGMAT 180 RYTE RL KI++ELLADI+KETVDF PNYDG E EPS+LP RIPNLL+NGSSGIAVGMAT Sbjct: 121 RYTEIRLSKIAHELLADIDKETVDFEPNYDGSETEPSILPARIPNLLINGSSGIAVGMAT 180 Query: 181 NIPPHNITEVINGALHLLANEQCTIDELIELVPAPDFPTGGIIYGVSGVRDGYRTGRGRV 240 NIPPHN+ EV++G LHLL N + T+DELIEL+PAPDFPT GIIYG+SGVR+GYRTGRGRV Sbjct: 181 NIPPHNLREVVDGCLHLLRNPEATVDELIELIPAPDFPTAGIIYGISGVREGYRTGRGRV 240 Query: 241 VMRAKTHFEEYGREGRIAIIVDELPYQVNKKALLERIAELVRDKKLEGISDLRDESDKSG 300 VMRAKTHFE+ R R AIIVDELPYQVNK+ LLERIAELV +K++EGISD+RDESDKSG Sbjct: 241 VMRAKTHFEDIDRGQRQAIIVDELPYQVNKRTLLERIAELVTEKRVEGISDIRDESDKSG 300 Query: 301 MRVVIELKRGEVPEVVLNNLYKQTQLQDTFGMNMVALVDGQPRLLNLKQLLECFLSHRRE 360 MRVVIELKRGEVPEVVLNNLYK TQLQDTFGMNMVALVDGQPRLLNL+Q+LECFL HRRE Sbjct: 301 MRVVIELKRGEVPEVVLNNLYKNTQLQDTFGMNMVALVDGQPRLLNLRQMLECFLLHRRE 360 Query: 361 VVTRRTVFELRKARERGHVLEGLAVALANIDDFIAIIRAAPTPPIAKAELMSRAWDSSMV 420 VVTRRTVF+LRKARERGH+LEGLAVALANID+FIAII+AAPTPPIAK ELM R+WDS +V Sbjct: 361 VVTRRTVFDLRKARERGHILEGLAVALANIDEFIAIIKAAPTPPIAKQELMGRSWDSGLV 420 Query: 421 REMLARAGEANEGGIEAFRPESLPAHYGIQSDGLYKLSDEQAQEILQMRLQRLTGLEQDK 480 R+ML+RA GG A+RPE L +G+Q DGLYKLSD QAQEILQMRLQRLTGLEQDK Sbjct: 421 RDMLSRAESDTVGGRTAYRPEGLLPVFGMQGDGLYKLSDTQAQEILQMRLQRLTGLEQDK 480 Query: 481 IVNEYKDVMAQIADLLDILAKPARVTAIITDELNAAKNDFGIGAKDERRSTIEHNATDLA 540 IV EY++VMAQIADLLDILA+P R+TAII +EL +++FG DERRS IEHNAT+L Sbjct: 481 IVQEYREVMAQIADLLDILARPERITAIIVEELTLIRSEFG----DERRSQIEHNATELD 536 Query: 541 TEDLITPQDMVVTLSHTGYMKSQPVSEYRAQKRGGRGKQAMATKDDDWIDQLFIANTHDY 600 TEDLITPQD+VVTLSH+GYMKSQP+SEYRAQKRGGRGKQA ATK+DDWID LF+ANTHDY Sbjct: 537 TEDLITPQDLVVTLSHSGYMKSQPISEYRAQKRGGRGKQAAATKEDDWIDTLFVANTHDY 596 Query: 601 ILCFSNRGRLYWLKVWEVPQGSRNSRGKPIVNMFPLQDGEKITVILPVSGANRSFPDDRY 660 ILCFSNRGRLYWLKVWEVPQGSRNSRG+PIVNMFPL GEKI VILPV + F + + Sbjct: 597 ILCFSNRGRLYWLKVWEVPQGSRNSRGRPIVNMFPLSPGEKINVILPV----KQFDEQHF 652 Query: 661 VFMATSLGTVKKTPLSDFSNPRKAGIIAVDLDEGDFLIGAALTDGQHDVMLFSDGGKAVR 720 VFMATS GTVKKT L++FSNPRKAGIIAVDLDEGDFLIGA +TDGQHDVMLFSD GKAVR Sbjct: 653 VFMATSKGTVKKTALTEFSNPRKAGIIAVDLDEGDFLIGADITDGQHDVMLFSDAGKAVR 712 Query: 721 FDENDVRPMGRTARGVRGMNLEETQQVIALLVA------ENEQQ---SVLTATENGFGKR 771 FDENDVRPMGR ARGVRGMNLE+ QQVIA+LVA E EQ SVLTATENG+GKR Sbjct: 713 FDENDVRPMGRQARGVRGMNLEDGQQVIAMLVAPAETAGEGEQAVAGSVLTATENGYGKR 772 Query: 772 TPITEYTRHGRGTKGMIAIQTSERNGKVVAATLVDSTDEIMLITTGGVLIRTRVSEIREM 831 TPI+EYTRHGRGTKGMIAIQTSERNGKVVAA LV DEIMLITTGGVLIRTRV EIREM Sbjct: 773 TPISEYTRHGRGTKGMIAIQTSERNGKVVAAALVAPEDEIMLITTGGVLIRTRVDEIREM 832 Query: 832 GRATQGVTLIAVEDGTKLSGLQRVVESDVEDAVEGDNAEGAGSEAPAA 879 GRATQGVTLIAV +G KLSGLQRVVESD E D A + EAP+A Sbjct: 833 GRATQGVTLIAVGEGNKLSGLQRVVESDAEGEDAADGATESDGEAPSA 880 >gb|AEG69754.1| DNA gyrase subunit A [Ralstonia solanacearum Po82] Length = 1016 Score = 1457 bits (3773), Expect = 0.0, Method: Compositional matrix adjust. Identities = 713/888 (80%), Positives = 784/888 (88%), Gaps = 17/888 (1%) Query: 1 MDQFAKETIPISLEEEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHEMNNVWN 60 MDQFAKET+P+SLEEEMR SYL YAMSVIVGRALPDVRDGLKPVHRRVLYAMHE+NN WN Sbjct: 132 MDQFAKETLPVSLEEEMRSSYLAYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELNNDWN 191 Query: 61 RPFVKCARVVGEVMGKYHPHGDASIYDTLVRMAQDFSLRYTLVDGQGNFGSIDGDGAAAM 120 RP+ K AR+VG+V+GKYHPHGD+++YDT+VRMAQDFSLRY LVDGQGNFGS+DGD AAAM Sbjct: 192 RPYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM 251 Query: 121 RYTECRLDKISNELLADIEKETVDFVPNYDGKEKEPSVLPTRIPNLLVNGSSGIAVGMAT 180 RYTE RL KI++ELLADI+KETVDF PNYDG E EPS+LP RIPNLL+NGSSGIAVGMAT Sbjct: 252 RYTEIRLSKIAHELLADIDKETVDFEPNYDGSETEPSILPARIPNLLINGSSGIAVGMAT 311 Query: 181 NIPPHNITEVINGALHLLANEQCTIDELIELVPAPDFPTGGIIYGVSGVRDGYRTGRGRV 240 NIPPHN+ EV++G LHLL N + T+DELIEL+PAPDFPT GIIYG+SGVR+GYRTGRGRV Sbjct: 312 NIPPHNLREVVDGCLHLLRNPEVTVDELIELIPAPDFPTAGIIYGISGVREGYRTGRGRV 371 Query: 241 VMRAKTHFEEYGREGRIAIIVDELPYQVNKKALLERIAELVRDKKLEGISDLRDESDKSG 300 VMRAKTHFE+ R R AIIVDELPYQVNK+ LLERIAELV +K++EGISD+RDESDKSG Sbjct: 372 VMRAKTHFEDIDRGQRQAIIVDELPYQVNKRTLLERIAELVTEKRVEGISDIRDESDKSG 431 Query: 301 MRVVIELKRGEVPEVVLNNLYKQTQLQDTFGMNMVALVDGQPRLLNLKQLLECFLSHRRE 360 MRVVIELKRGEVPEVVLNNLYK TQLQDTFGMNMVALVDGQPRLLNL+Q+LECFL HRRE Sbjct: 432 MRVVIELKRGEVPEVVLNNLYKNTQLQDTFGMNMVALVDGQPRLLNLRQMLECFLLHRRE 491 Query: 361 VVTRRTVFELRKARERGHVLEGLAVALANIDDFIAIIRAAPTPPIAKAELMSRAWDSSMV 420 VVTRRTVF+LRKARERGH+LEGLAVALANID+FIAII+AAPTPPIAK ELM R+WDS +V Sbjct: 492 VVTRRTVFDLRKARERGHILEGLAVALANIDEFIAIIKAAPTPPIAKQELMGRSWDSGLV 551 Query: 421 REMLARAGEANEGGIEAFRPESLPAHYGIQSDGLYKLSDEQAQEILQMRLQRLTGLEQDK 480 R+ML+RA GG A+RPE L +G+Q DGLYKLSD QAQEILQMRLQRLTGLEQDK Sbjct: 552 RDMLSRAESDTVGGRTAYRPEGLLPVFGMQGDGLYKLSDTQAQEILQMRLQRLTGLEQDK 611 Query: 481 IVNEYKDVMAQIADLLDILAKPARVTAIITDELNAAKNDFGIGAKDERRSTIEHNATDLA 540 IV EY++VMAQIADLLDILA+P R+TAII +EL +++FG DERRS IEHNAT+L Sbjct: 612 IVQEYREVMAQIADLLDILARPERITAIIVEELTLIRSEFG----DERRSQIEHNATELD 667 Query: 541 TEDLITPQDMVVTLSHTGYMKSQPVSEYRAQKRGGRGKQAMATKDDDWIDQLFIANTHDY 600 TEDLITPQD+VVTLSH+GYMKSQP+SEYRAQKRGGRGKQA ATK+DDWID LF+ANTHDY Sbjct: 668 TEDLITPQDLVVTLSHSGYMKSQPISEYRAQKRGGRGKQAAATKEDDWIDTLFVANTHDY 727 Query: 601 ILCFSNRGRLYWLKVWEVPQGSRNSRGKPIVNMFPLQDGEKITVILPVSGANRSFPDDRY 660 ILCFSNRGRLYWLKVWEVPQGSRNSRG+PIVNMFPL GEKI VILPV + F + + Sbjct: 728 ILCFSNRGRLYWLKVWEVPQGSRNSRGRPIVNMFPLSPGEKINVILPV----KQFDELHF 783 Query: 661 VFMATSLGTVKKTPLSDFSNPRKAGIIAVDLDEGDFLIGAALTDGQHDVMLFSDGGKAVR 720 VFMATS GTVKKT L++FSNPRKAGIIAVDLDEGDFLIGA +TDGQHDVMLFSD GKAVR Sbjct: 784 VFMATSKGTVKKTALTEFSNPRKAGIIAVDLDEGDFLIGADITDGQHDVMLFSDAGKAVR 843 Query: 721 FDENDVRPMGRTARGVRGMNLEETQQVIALLVA------ENEQQ---SVLTATENGFGKR 771 FDENDVRPMGR ARGVRGMNLEE QQVIA+LVA E EQ SVLTATENG+GKR Sbjct: 844 FDENDVRPMGRQARGVRGMNLEEGQQVIAMLVAPAETAGEGEQAVAGSVLTATENGYGKR 903 Query: 772 TPITEYTRHGRGTKGMIAIQTSERNGKVVAATLVDSTDEIMLITTGGVLIRTRVSEIREM 831 TPI+EYTRHGRGTKGMIAIQTSERNGKVVAA LV DEIMLITTGGVLIRTRV EIREM Sbjct: 904 TPISEYTRHGRGTKGMIAIQTSERNGKVVAAALVAPEDEIMLITTGGVLIRTRVDEIREM 963 Query: 832 GRATQGVTLIAVEDGTKLSGLQRVVESDVEDAVEGDNAEGAGSEAPAA 879 GRATQGVTLIAV +G KLSGLQRVVESD E D A + EAP+A Sbjct: 964 GRATQGVTLIAVGEGNKLSGLQRVVESDAEGEDAADGATESDGEAPSA 1011 >ref|YP_003753116.1| DNA gyrase, subunit A, type II topoisomerase [Ralstonia solanacearum PSI07] emb|CBJ51849.1| DNA gyrase, subunit A, type II topoisomerase [Ralstonia solanacearum PSI07] Length = 885 Score = 1455 bits (3766), Expect = 0.0, Method: Compositional matrix adjust. Identities = 710/888 (79%), Positives = 780/888 (87%), Gaps = 17/888 (1%) Query: 1 MDQFAKETIPISLEEEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHEMNNVWN 60 MDQFAKET+P+SLEEEMR SYL YAMSVIVGRALPDVRDGLKPVHRRVLYAMHE+NN WN Sbjct: 1 MDQFAKETLPVSLEEEMRSSYLAYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELNNDWN 60 Query: 61 RPFVKCARVVGEVMGKYHPHGDASIYDTLVRMAQDFSLRYTLVDGQGNFGSIDGDGAAAM 120 RP+ K AR+VG+V+GKYHPHGD+++YDT+VRMAQDFSLRY LVDGQGNFGS+DGD AAAM Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM 120 Query: 121 RYTECRLDKISNELLADIEKETVDFVPNYDGKEKEPSVLPTRIPNLLVNGSSGIAVGMAT 180 RYTE RL KI++ELLADI+KETV+F PNYDG E EPS+LP RIPNLL+NGSSGIAVGMAT Sbjct: 121 RYTEIRLSKIAHELLADIDKETVNFEPNYDGSETEPSILPARIPNLLINGSSGIAVGMAT 180 Query: 181 NIPPHNITEVINGALHLLANEQCTIDELIELVPAPDFPTGGIIYGVSGVRDGYRTGRGRV 240 NIPPHN+ EV++G LHLL N T+DELIEL+PAPDFPT GIIYG+SGVR+GYRTGRGRV Sbjct: 181 NIPPHNLREVVDGCLHLLRNPDATVDELIELIPAPDFPTAGIIYGISGVREGYRTGRGRV 240 Query: 241 VMRAKTHFEEYGREGRIAIIVDELPYQVNKKALLERIAELVRDKKLEGISDLRDESDKSG 300 VMRAKTHFE+ R R AIIVDELPYQVNK+ LLERIAELV +K++EGISD+RDESDKSG Sbjct: 241 VMRAKTHFEDIDRGQRQAIIVDELPYQVNKRTLLERIAELVTEKRVEGISDIRDESDKSG 300 Query: 301 MRVVIELKRGEVPEVVLNNLYKQTQLQDTFGMNMVALVDGQPRLLNLKQLLECFLSHRRE 360 MRVVIELKRGEVPEVVLNNLYK TQLQDTFGMNMVALVDGQPRLLNL+Q+LECFL HRRE Sbjct: 301 MRVVIELKRGEVPEVVLNNLYKNTQLQDTFGMNMVALVDGQPRLLNLRQMLECFLLHRRE 360 Query: 361 VVTRRTVFELRKARERGHVLEGLAVALANIDDFIAIIRAAPTPPIAKAELMSRAWDSSMV 420 VVTRRTVF+LRKARERGH+LEGLAVALANID+FIAII+AAPTPPIAK ELM R+WDS +V Sbjct: 361 VVTRRTVFDLRKARERGHILEGLAVALANIDEFIAIIKAAPTPPIAKQELMGRSWDSGLV 420 Query: 421 REMLARAGEANEGGIEAFRPESLPAHYGIQSDGLYKLSDEQAQEILQMRLQRLTGLEQDK 480 REML+RA GG A+RPE L +G+Q DGLYKLSD QAQEILQMRLQRLTGLEQDK Sbjct: 421 REMLSRAESDTAGGRAAYRPEGLLPVFGMQDDGLYKLSDTQAQEILQMRLQRLTGLEQDK 480 Query: 481 IVNEYKDVMAQIADLLDILAKPARVTAIITDELNAAKNDFGIGAKDERRSTIEHNATDLA 540 IV EY++VM QIADLLDILA+P R+TAII +EL + +FG DERRS IEHNAT+L Sbjct: 481 IVQEYREVMEQIADLLDILARPERITAIIVEELTLIRAEFG----DERRSQIEHNATELD 536 Query: 541 TEDLITPQDMVVTLSHTGYMKSQPVSEYRAQKRGGRGKQAMATKDDDWIDQLFIANTHDY 600 TEDLITPQD+VVTLSH+GYMKSQP+SEYRAQKRGGRGKQA ATK+DDWID LF+ANTHDY Sbjct: 537 TEDLITPQDLVVTLSHSGYMKSQPISEYRAQKRGGRGKQAAATKEDDWIDTLFVANTHDY 596 Query: 601 ILCFSNRGRLYWLKVWEVPQGSRNSRGKPIVNMFPLQDGEKITVILPVSGANRSFPDDRY 660 ILCFSNRGRLYWLKVWEVPQGSRNSRG+PIVNMFPL GEKI VILPV + F + + Sbjct: 597 ILCFSNRGRLYWLKVWEVPQGSRNSRGRPIVNMFPLSPGEKINVILPV----KQFDEQHF 652 Query: 661 VFMATSLGTVKKTPLSDFSNPRKAGIIAVDLDEGDFLIGAALTDGQHDVMLFSDGGKAVR 720 VFMATS GTVKKT L++FSNPRKAGIIAVDLDEGDFLIGA +TDGQHDVMLFSD GKAVR Sbjct: 653 VFMATSKGTVKKTALTEFSNPRKAGIIAVDLDEGDFLIGADITDGQHDVMLFSDAGKAVR 712 Query: 721 FDENDVRPMGRTARGVRGMNLEETQQVIALLVA------ENEQQ---SVLTATENGFGKR 771 FDENDVRPMGR ARGVRGMNLEE QQVIA+LVA E EQ SVLTATENG+GKR Sbjct: 713 FDENDVRPMGRQARGVRGMNLEEGQQVIAMLVAPAETAGEGEQAVAGSVLTATENGYGKR 772 Query: 772 TPITEYTRHGRGTKGMIAIQTSERNGKVVAATLVDSTDEIMLITTGGVLIRTRVSEIREM 831 TPI+EYTRHGRGTKGMIAIQTSERNGKVVAA LV DEIMLITTGGVLIRTRV EIREM Sbjct: 773 TPISEYTRHGRGTKGMIAIQTSERNGKVVAAALVAPEDEIMLITTGGVLIRTRVDEIREM 832 Query: 832 GRATQGVTLIAVEDGTKLSGLQRVVESDVEDAVEGDNAEGAGSEAPAA 879 GRATQGVTLIAV +G KLSGLQRVVESD E D+ + +AP A Sbjct: 833 GRATQGVTLIAVGEGNKLSGLQRVVESDAEGEDAADSGAESDGDAPGA 880