BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0036.0097.p (530 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777092.1| AMP-binding enzyme family protein [Herbaspir... 1029 0.0 ref|YP_004752546.1| acyl-coenzyme A synthetases/AMP-(fatty) acid... 500 e-139 gb|ADU90654.1| putative AMP-dependent synthetase and ligase [Col... 480 e-133 ref|YP_586515.1| AMP-dependent synthetase and ligase [Cupriavidu... 354 2e-95 ref|YP_257619.1| AMP-binding domain-containing protein [Pseudomo... 351 2e-94 ref|ZP_07003149.1| acyl-coenzyme A synthetases/AMP-(fatty) acid ... 350 5e-94 ref|ZP_06458542.1| AMP-binding enzyme family protein [Pseudomona... 348 9e-94 ref|ZP_07266173.1| AMP-dependent synthetase and ligase [Pseudomo... 348 1e-93 gb|EGH82803.1| AMP-binding enzyme family protein [Pseudomonas sy... 348 1e-93 ref|YP_002030302.1| AMP-dependent synthetase and ligase [Stenotr... 347 2e-93 >ref|YP_003777092.1| AMP-binding enzyme family protein [Herbaspirillum seropedicae SmR1] gb|ADJ65184.1| AMP-binding enzyme family protein [Herbaspirillum seropedicae SmR1] Length = 586 Score = 1029 bits (2661), Expect = 0.0, Method: Compositional matrix adjust. Identities = 521/532 (97%), Positives = 522/532 (98%), Gaps = 2/532 (0%) Query: 1 MALFHHDTLQFAAALFAIWLAGKTAYLPSDALPDTCRQLQGEVDAFLGEFGAHCPALHPA 60 MALFHHDTLQFAAALFAIWLAGKTAYLPSDALPDTCRQLQGEVDAFLGEFGAHCPALHPA Sbjct: 55 MALFHHDTLQFAAALFAIWLAGKTAYLPSDALPDTCRQLQGEVDAFLGEFGAHCPALHPA 114 Query: 61 GDAAEGDTPDAWPALRADFAGLVVYTSGSTGLAQAIPKQLGQMANEVATLEALFGAIVGE 120 GDAAEGDTPDAWP LRADF GLVVYTSGSTGLAQAIPKQLGQMANEVATLEALFGAIVGE Sbjct: 115 GDAAEGDTPDAWPTLRADFGGLVVYTSGSTGLAQAIPKQLGQMANEVATLEALFGAIVGE 174 Query: 121 AEVIATVSHQHIYGLLFKVLWALCAGRPVHAGSAFFPEDLQRMAGARPWILLSSPAHLKR 180 AEVIATVSHQHIYGLLFKVLWALCAGRPVHAGSAFFPEDLQRMAGARPWILLSSPAHLKR Sbjct: 175 AEVIATVSHQHIYGLLFKVLWALCAGRPVHAGSAFFPEDLQRMAGARPWILLSSPAHLKR 234 Query: 181 LPEQSTQPDARQLRAIFSSGGPLPAQAAADSARLLGQRPLEIYGSSETGGIAWRQPQTDP 240 LPEQ QPDARQLRAIFSSGGPLPAQAAADSARLLGQRPLEIYGSSETGGIAWRQPQTDP Sbjct: 235 LPEQGAQPDARQLRAIFSSGGPLPAQAAADSARLLGQRPLEIYGSSETGGIAWRQPQTDP 294 Query: 241 LQRQEHWQAMPGVEVRLGAEGELEVRSPHLPDSAWFGMADRAALVPGQPGQFELRGRSDR 300 LQRQEHWQAMPGVEVRLGAEGELEVRSPHLPDSAWFGMADRAALVPGQPGQFELRGRSDR Sbjct: 295 LQRQEHWQAMPGVEVRLGAEGELEVRSPHLPDSAWFGMADRAALVPGQPGQFELRGRSDR 354 Query: 301 IVKLEEKRISLTRIEQLLNASPLVEDVRVIVHQGRRARQFIAAFVVPSAPAHTMLAAQGK 360 IVKLEEKRISLTRIEQLLNASPLVEDVRVIVHQGRRARQFIAAFVVPSAPAH MLAAQGK Sbjct: 355 IVKLEEKRISLTRIEQLLNASPLVEDVRVIVHQGRRARQFIAAFVVPSAPAHAMLAAQGK 414 Query: 361 LAL--PLKAVLAGAIESIAVPRLWRYLPALPVNPQGKVTLSALTALLESPAAVSVVSAPT 418 LAL LKAVLAGAIESIA+PRLWRYLPALPVNPQGKVTLSALTALLESPAA VVSAPT Sbjct: 415 LALNTALKAVLAGAIESIALPRLWRYLPALPVNPQGKVTLSALTALLESPAAAPVVSAPT 474 Query: 419 LPQVSELERSSEHVQLALDIPADLLYFRGHFPGSPILPGVVQTDWSLALGRRYFDLPPHF 478 LPQVSELERSSEHVQLALDIPADLLYFRGHFPGSPILPGVVQTDWSLALGRRYFDLPPHF Sbjct: 475 LPQVSELERSSEHVQLALDIPADLLYFRGHFPGSPILPGVVQTDWSLALGRRYFDLPPHF 534 Query: 479 LGLQALKFQRVITPGMRVLLDLQFEAGKSQLSFRLHSEGGQHASGRFLLGAA 530 LGLQALKFQRVITPGMRVLLDLQFEAGKSQLSFRLHSEGGQHASGRFLLGAA Sbjct: 535 LGLQALKFQRVITPGMRVLLDLQFEAGKSQLSFRLHSEGGQHASGRFLLGAA 586 >ref|YP_004752546.1| acyl-coenzyme A synthetases/AMP-(fatty) acid ligase [Collimonas fungivorans Ter331] gb|AEK61723.1| Acyl-coenzyme A synthetases/AMP-(fatty) acid ligase [Collimonas fungivorans Ter331] Length = 604 Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust. Identities = 289/536 (53%), Positives = 351/536 (65%), Gaps = 13/536 (2%) Query: 1 MALFHHDTLQFAAALFAIWLAGKTAYLPSDALPDTCRQLQGEVDAFLGEFG-AHCPALHP 59 AL+ D+ FA L W AGKT YLP D LP TC L VD +LG+F + P Sbjct: 70 FALYSSDSATFACILLGAWQAGKTVYLPGDVLPATCANLGKLVDGYLGDFPPQYAPLTEA 129 Query: 60 AGDAAEGDTPD-AWPALRADFAGLVVYTSGSTGLAQAIPKQLGQMANEVATLEALFGAIV 118 AAE D A+ AL DF LV+YTSGSTG QA+PK L Q+A EVA+LE LFG + Sbjct: 130 PLTAAEADGARPAFKALSPDFPALVIYTSGSTGEPQAVPKFLSQLAAEVASLEQLFGGRM 189 Query: 119 GEAEVIATVSHQHIYGLLFKVLWALCAGRPVHAGSAFFPEDLQRMAGARPWILLSSPAHL 178 G A+++ATVSHQHIYGLLFKVLW L AGR +HA + + Q ++G + +L+SSPAHL Sbjct: 190 GAADIVATVSHQHIYGLLFKVLWPLTAGRVIHARQLEYLNEFQPLSG-KQIVLVSSPAHL 248 Query: 179 KRLPEQSTQPDARQLRAIFSSGGPLPAQAAADSARLLGQRPLEIYGSSETGGIAWRQPQT 238 KRLP + A +R IFSSGGPLP++ AA + R LG P+E+YGSSETGG+AWRQ Sbjct: 249 KRLPAAFSSDQAAAIRVIFSSGGPLPSEVAAAAGRALGSIPIEVYGSSETGGVAWRQRVA 308 Query: 239 DPLQRQEHWQAMPGVEVRLGAEGE-LEVRSPHLPDSAWFGMADRAALVPGQPGQFELRGR 297 + WQAMP V R+ A E LE+ SPHLPD+ W +AD+ V Q +F L+GR Sbjct: 309 GA---DDSWQAMPAVAWRVAANDEVLEISSPHLPDAGWHALADQVQAVDRQ--RFRLKGR 363 Query: 298 SDRIVKLEEKRISLTRIEQLLNASPLVEDVRVIVHQG--RRARQFIAAFVVPSAPAHTML 355 DRIVK+EEKRISL +E+ L A LV D RV++ + + RQ IAAFVV SA ML Sbjct: 364 VDRIVKVEEKRISLDGLERYLKAITLVADARVVLVEQPELQQRQRIAAFVVLSASGSEML 423 Query: 356 AAQGKLALP--LKAVLAGAIESIAVPRLWRYLPALPVNPQGKVTLSALTALLESPAAVSV 413 AAQGKLAL L+ +A A+E+IA+PR WRYL ALPVN QGK T + L ALLE A Sbjct: 424 AAQGKLALNRLLREGIAHAVEAIALPRSWRYLDALPVNAQGKTTRADLLALLEPAAGAGP 483 Query: 414 VSAPTLPQVSELERSSEHVQLALDIPADLLYFRGHFPGSPILPGVVQTDWSLALGRRYFD 473 AP P LE+ + V L L +PADLLYF GHF G+PILPGVVQ DW+++ GRRYF Sbjct: 484 APAPRKPGERLLEQEPQRVLLELTVPADLLYFNGHFEGAPILPGVVQLDWAISYGRRYFA 543 Query: 474 LPPHFLGLQALKFQRVITPGMRVLLDLQFEAGKSQLSFRLHSEGGQHASGRFLLGA 529 L PHFLG+ LKFQR ITPGM V L+L + KS L+FRL S GQHASGR GA Sbjct: 544 LAPHFLGMLGLKFQRAITPGMVVQLELLHDLQKSSLAFRLFSVAGQHASGRITFGA 599 >gb|ADU90654.1| putative AMP-dependent synthetase and ligase [Collimonas sp. MPS11E8] Length = 616 Score = 480 bits (1235), Expect = e-133, Method: Compositional matrix adjust. Identities = 280/561 (49%), Positives = 349/561 (62%), Gaps = 37/561 (6%) Query: 1 MALFHHDTLQFAAALFAIWLAGKTAYLPSDALPDTCRQLQGEVDAFLGEFGAHCPALHPA 60 AL+ D+ FA L W A KT YL D LP TC L VD +LGEF A L Sbjct: 58 FALYSSDSATFACILLGAWQADKTIYLAGDVLPATCASLGTLVDGYLGEFPAQYAPLTID 117 Query: 61 GDAAEGDTPDAWPALRADFAGLVVYTSGSTGLAQAIPKQLGQMANEVATLEALFGAIVGE 120 D P+ + L DF GLV+YTSGS+G QA+PK L Q+ANEVA+LE LFG +G Sbjct: 118 SDDEIQARPE-FKTLLPDFPGLVIYTSGSSGEPQAVPKFLSQLANEVASLEQLFGDRIGN 176 Query: 121 AEVIATVSHQHIYGLLFKVLWALCAGRPVHAGSAFFPEDLQRMAGARPWILLSSPAHLKR 180 A+++ATVSHQHIYGLLFKVLW L GR +HA + E Q + P +L+SSPAHL+R Sbjct: 177 ADIVATVSHQHIYGLLFKVLWPLTQGRAIHARQISYLEQFQPPRDSHPVVLVSSPAHLRR 236 Query: 181 LPEQSTQPDARQLRAIFSSGGPLPAQAAADSARLLGQRPLEIYGSSETGGIAWRQPQTDP 240 LP + TQ A +R IFSSGGPLPA+AA + RLLG P+E+YGSSETGG+AWRQ Sbjct: 237 LPVEFTQSQAAAIRVIFSSGGPLPAEAAVAAGRLLGSIPIEVYGSSETGGVAWRQRIAGA 296 Query: 241 LQRQEHWQAMPGVEVRLGAEGE-LEVRSPHLPDSAWFGMADRAALVPGQPGQFELRGRSD 299 + WQ MP + R+ A E LE+RSPHL D+ W + D+ LV P +F L+GR D Sbjct: 297 ---DDSWQVMPAIAWRVAANDELLEIRSPHLADADWHALPDQVQLV--GPQRFCLKGRVD 351 Query: 300 RIVKLEEKRISLTRIEQLLNASPLVEDVRVIVHQ------------------GRRARQFI 341 RIVK+EEKRISL +E+ L V D RV++ + + RQ I Sbjct: 352 RIVKVEEKRISLDALERELKTMAQVADARVLLVEQPESQLNAQPNAQLDSQLKTQQRQRI 411 Query: 342 AAFVVPSAPAHTMLAAQGK--LALPLKAVLAGAIESIAVPRLWRYLPALPVNPQGKVTLS 399 AAFVV SA +LAAQGK L L+ +A A+E++A+PR+WRY+ ++PVN QGK T + Sbjct: 412 AAFVVLSAAGMEILAAQGKPILNSMLRDGMAHAVEAVALPRIWRYVESMPVNAQGKTTRA 471 Query: 400 ALTALLESPAAVS--VVSAPTLPQVSELERSSEHVQLALDIPADLLYFRGHFPGSPILPG 457 AL ALLESP + S + P V LE+ S V L L +PADLLYF GHF G+PILPG Sbjct: 472 ALLALLESPPSGSPDLAGLALKPAVRLLEQESHRVLLELTVPADLLYFNGHFDGAPILPG 531 Query: 458 VVQTDWSLALGRRYFDLPPHFLGLQALKFQRVITPGMRVLLDLQF--------EAGKSQL 509 VVQ DW+++ GR+YF L PHFLG+ LKFQRVI PGM V L+L E KS L Sbjct: 532 VVQLDWAISYGRQYFALAPHFLGVLGLKFQRVIIPGMVVQLELLHALKHDSVQEPPKSSL 591 Query: 510 SFRLHSEGGQHASGRFLLGAA 530 +FR+ S GQHASGR GA+ Sbjct: 592 AFRMFSTAGQHASGRITFGAS 612 >ref|YP_586515.1| AMP-dependent synthetase and ligase [Cupriavidus metallidurans CH34] gb|ABF11246.1| AMP-dependent synthetase and ligase [Cupriavidus metallidurans CH34] Length = 557 Score = 354 bits (909), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 227/534 (42%), Positives = 297/534 (55%), Gaps = 33/534 (6%) Query: 2 ALFHHDTLQFAAALFAIWLAGKTAYLPSDALPDTCRQLQGEVDAFLGEFGAHCPALHPAG 61 ALF +FAAALF W AGK LP DA DT L+ +VD G+ L P+ Sbjct: 44 ALFVDSPAEFAAALFGAWHAGKHVVLPGDARRDTLAALREQVDGMAGDLPQ---GLQPSA 100 Query: 62 DAAEGDTPDAWPALRADFAGLVVYTSGSTGLAQAIPKQLGQMANEVATLEALFGAIV-GE 120 ++P WP L A + ++TSGSTG +A PK+L Q+ EV LE FG + E Sbjct: 101 T----ESPLQWPRLDARETWITLFTSGSTGAPEAAPKRLAQLEAEVHALEQAFGPTMPRE 156 Query: 121 AEVIATVSHQHIYGLLFKVLWALCAGRPVHAGSAFFPEDLQRMAGA--RPWILLSSPAHL 178 ++ TVSHQHIYGLLF VLW L GR + F E+L P +L+SSPAHL Sbjct: 157 NRLLTTVSHQHIYGLLFTVLWPLAVGRSMPVARMAFHEELVAACAEDRTPVVLVSSPAHL 216 Query: 179 KRLPEQSTQPDARQL-RAIFSSGGPLPAQAAADSARLLGQRPLEIYGSSETGGIAWRQPQ 237 KR+PE R + RA+FSSGGPLP + A+D R G P+E++GSSETGG+AWRQ Sbjct: 217 KRMPEALDWAATRGVVRAVFSSGGPLPPEGASDVLRHTGVSPIEVFGSSETGGVAWRQRA 276 Query: 238 TDPLQRQEHWQAMPGVEVRLGAEGELEVRSPHLPDSAWFGMADRAALVPGQPGQFELRGR 297 + W +PGV RL EG L VRS HL D W ADR ++P G F L GR Sbjct: 277 AG----DDRWTPLPGVAWRL-QEGFLAVRSAHLADDDWQVCADR--VLPTGDGAFVLAGR 329 Query: 298 SDRIVKLEEKRISLTRIEQLLNASPLVEDVRVIVHQGRRARQFIAAFVVPSAPAHTMLAA 357 +DRIVK+EEKR+SL+ IEQ L ASPLV + RV++ + + AA V+ A +M Sbjct: 330 ADRIVKIEEKRVSLSAIEQRLQASPLVREARVLLIETAIGTRVGAAIVLQEA-GQSMHDG 388 Query: 358 QGKLAL--PLKAVLAGAIESIAVPRLWRYLPALPVNPQGKVTLSALTALLESPAAVSVVS 415 +G+ AL L+ LA ++ +A+PR W + ALP N QGK T + L LL Sbjct: 389 KGRHALIAALRRALADGVDRLALPRRWAFPQALPCNAQGKTTEAMLRELLRH-------- 440 Query: 416 APTLPQVSELERSSEHVQLALDIPADLLYFRGHFPGSPILPGVVQTDWSLALGRRYFDLP 475 ++P +E LDI DL F GHFPG+P++PGV Q DW +AL + +P Sbjct: 441 --SIPVARWVEADDTSATAELDIAEDLAIFDGHFPGAPVVPGVAQVDWVMALAPQRLAVP 498 Query: 476 P--HFLGLQALKFQRVITPGMRVLLDLQFEAGKSQLSFRLHSEGGQHASGRFLL 527 P F L LKFQ V+ PG V + L ++ L+FRL S+ G HASG+ + Sbjct: 499 PRQRFARLDVLKFQAVMRPGAAVRMALDWQPASCTLAFRLTSDAGSHASGKIVF 552 >ref|YP_257619.1| AMP-binding domain-containing protein [Pseudomonas fluorescens Pf-5] gb|AAY95884.1| AMP-binding domain protein [Pseudomonas fluorescens Pf-5] Length = 557 Score = 351 bits (900), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 227/535 (42%), Positives = 308/535 (57%), Gaps = 33/535 (6%) Query: 1 MALFHHDTLQFAAALFAIWLAGKTAYLPSDALPDTCRQLQGEVDAFLGEFGAHCPALHPA 60 +A+ D ++ A AL W AG + LP+D T ++ EVD +L + L Sbjct: 49 LAVHLEDAVELAVALLGAWRAGASVLLPADLQAQTRQRWSSEVDLWLTDQDTPLHQLQA- 107 Query: 61 GDAAEGDTPDAWPALRADFAGLVVYTSGSTGLAQAIPKQLGQMANEVATLEALFGAIVGE 120 +P A L D L + TSGS+G + I K L Q+ANEV LE L+GA +G+ Sbjct: 108 -------SPLAPAELDPDTCQLSLCTSGSSGEPKRIEKNLRQLANEVVALEHLWGADLGQ 160 Query: 121 AEVIATVSHQHIYGLLFKVLWALCAGRPVHAGSAFFPEDLQRMAGARP---WILLSSPAH 177 A +I +V+ QHIYGLLF+VLW LCAGRP FPEDLQR + P W+ +SPA Sbjct: 161 AWIIGSVATQHIYGLLFRVLWPLCAGRPFVRRQLPFPEDLQRASRECPAFAWV--ASPAL 218 Query: 178 LKRLPEQSTQPDARQLRAIFSSGGPLPAQAAADSARLLGQRPLEIYGSSETGGIAWRQPQ 237 LKR+ + P Q+R +FSSGG LPA+AA+ + L Q P EI GSSETGGIAWRQ Sbjct: 219 LKRMGDNLDWPALSQVRRVFSSGGALPAEAASGLHQRLQQWPTEILGSSETGGIAWRQGP 278 Query: 238 TDPLQRQEHWQAMPGVEVRLGAEGELEVRSPHLPDSAWFGMADRAALVPGQPGQFELRGR 297 WQ V + A+G L + SP+LP AD A + G+FEL GR Sbjct: 279 G-------LWQPFADVRLSQDADGALLIASPYLPAGHVEHTADAARIAAD--GRFELLGR 329 Query: 298 SDRIVKLEEKRISLTRIEQLLNASPLVEDVRVIVHQGRRARQFIAAFVVPSAPAHTMLAA 357 DRIVKLEEKRISL +EQ L + V + R+ V + RA ++ A +V S P L Sbjct: 330 LDRIVKLEEKRISLPMLEQALASHEWVAEARLGVIEDNRA--YLGALLVLSEPGLHALRN 387 Query: 358 QGK--LALPLKAVLAGAIESIAVPRLWRYLPALPVNPQGKVTLSALTALLESPAAVSVVS 415 QG+ L L+ LAG E++A+PR WR + LP+N QGK+ + + ALL +P Sbjct: 388 QGRRHLTQALRQHLAGHCEALALPRRWRLVRQLPLNSQGKLPQAQVQALLLAPR------ 441 Query: 416 APTLPQVSELERSSEHVQLALDIPADLLYFRGHFPGSPILPGVVQTDWSLALGRRYFDLP 475 P P+V E + E QL L IP DL YF GHFP +P+LPGVVQ DW+LALG++ +LP Sbjct: 442 -PQAPEVLEQRQHEEEWQLQLAIPPDLAYFSGHFPQTPVLPGVVQVDWALALGQQLLELP 500 Query: 476 PHFLGLQALKFQRVITPGMRVLLDLQFEAGKSQLSFRLHSEGGQHASGRFLLGAA 530 F G++ LKFQ+++ PG R+ L+L+F+A + +L F ++G + GR +L A+ Sbjct: 501 GRFAGMEVLKFQQLVRPGDRIQLNLRFDAQRQKLYFAYLNDGAPCSCGRIVLEAS 555 >ref|ZP_07003149.1| acyl-coenzyme A synthetases/AMP-(fatty) acid ligase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gb|EFI01486.1| acyl-coenzyme A synthetases/AMP-(fatty) acid ligase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 560 Score = 350 bits (897), Expect = 5e-94, Method: Compositional matrix adjust. Identities = 227/535 (42%), Positives = 301/535 (56%), Gaps = 36/535 (6%) Query: 1 MALFHHDTLQFAAALFAIWLAGKTAYLPSDALPDTCRQLQGEVDAFLGEF--GAHCPALH 58 +A+ D A ALF W AG LP+D T + +VD +L + H LH Sbjct: 49 LAVHLEDAADLAVALFGAWRAGVHVLLPADLQGQTRERWANQVDLWLTDLTQDTHLSDLH 108 Query: 59 PAGDAAEGDTPDAWPALRADFAGLVVYTSGSTGLAQAIPKQLGQMANEVATLEALFGAIV 118 A A AL D L + TSGS+G + I K+L Q+ANEV LE L+GA + Sbjct: 109 AAQLAP--------AALDLDQCRLSLCTSGSSGEPKLIEKRLRQLANEVCGLEQLWGAQI 160 Query: 119 GEAEVIATVSHQHIYGLLFKVLWALCAGRPVHAGSAFFPEDLQRMAGARP---WILLSSP 175 G A +I +V+ QHIYGLLF++LW LCA RP F EDLQR + P W+ +SP Sbjct: 161 GSACMIGSVATQHIYGLLFRLLWPLCAARPFVRRQLPFAEDLQRASREYPSFAWV--ASP 218 Query: 176 AHLKRLPEQSTQPDARQLRAIFSSGGPLPAQAAADSARLLGQRPLEIYGSSETGGIAWRQ 235 A LKR+ + +R +FSSGG LPA+AA + LGQ P EI GSSETGGIAWRQ Sbjct: 219 ALLKRMGDNLDWSSLSAVRRVFSSGGALPAEAAQSLQQRLGQWPTEILGSSETGGIAWRQ 278 Query: 236 PQTDPLQRQEHWQAMPGVEVRLGAEGELEVRSPHLPDSAWFGMADRAALVPGQPGQFELR 295 + +HWQA GVE+ EG L + SP+LP AD A+ G G+FEL Sbjct: 279 GE-------QHWQAFDGVELSQNNEGALRISSPYLPPGHVEQTAD--AVQIGNDGRFELL 329 Query: 296 GRSDRIVKLEEKRISLTRIEQLLNASPLVEDVRVIVHQGRRARQFIAAFVVPSAPAHTML 355 GR DRIVKLEEKR+SL IEQ L V + R+ V Q RA + A +V S L Sbjct: 330 GRLDRIVKLEEKRVSLPLIEQALTTHEWVNEARLGVVQENRAS--LGALLVLSDAGLLAL 387 Query: 356 AAQGKLALP--LKAVLAGAIESIAVPRLWRYLPALPVNPQGKVTLSALTALLESPAAVSV 413 QG+ AL L+ L E+IA+PR WR L +P+N QGK+ + LL + Sbjct: 388 RNQGRRALTEALRQYLRPHCETIALPRRWRLLRQMPLNAQGKLAQMDVRNLL-------M 440 Query: 414 VSAPTLPQVSELERSSEHVQLALDIPADLLYFRGHFPGSPILPGVVQTDWSLALGRRYFD 473 S P PQV + + + L L +P DL +F GHFP +P+LPGVVQ +W+++LG+R + Sbjct: 441 ASRPRQPQVLDQQTVDGELHLQLMVPPDLAFFSGHFPKAPVLPGVVQVEWAISLGQRLLN 500 Query: 474 LPPHFLGLQALKFQRVITPGMRVLLDLQFEAGKSQLSFRLH-SEGGQHASGRFLL 527 LP F G++ LKFQ+++ PG R+ L L+F+A +S+L F H SE +SGR +L Sbjct: 501 LPTDFAGMEVLKFQQLVRPGDRLKLTLRFDAARSKLHFAFHNSENAPCSSGRIVL 555 >ref|ZP_06458542.1| AMP-binding enzyme family protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] ref|ZP_06478796.1| AMP-binding enzyme family protein [Pseudomonas syringae pv. aesculi str. 2250] gb|EGH00459.1| AMP-binding enzyme family protein [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 560 Score = 348 bits (894), Expect = 9e-94, Method: Compositional matrix adjust. Identities = 227/535 (42%), Positives = 300/535 (56%), Gaps = 36/535 (6%) Query: 1 MALFHHDTLQFAAALFAIWLAGKTAYLPSDALPDTCRQLQGEVDAFLGEF--GAHCPALH 58 +A+ D A ALF W AG LP+D T + +VD +L + H LH Sbjct: 49 LAVHLEDAADLAVALFGAWRAGVHVLLPADLQGQTRERWANQVDLWLTDLTQDTHLSDLH 108 Query: 59 PAGDAAEGDTPDAWPALRADFAGLVVYTSGSTGLAQAIPKQLGQMANEVATLEALFGAIV 118 A A AL D L + TSGS+G + I K+L Q+ANEV LE L+GA + Sbjct: 109 AAQLAP--------AALDLDQCRLSLCTSGSSGEPKLIEKRLRQLANEVCGLEQLWGAQI 160 Query: 119 GEAEVIATVSHQHIYGLLFKVLWALCAGRPVHAGSAFFPEDLQRMAGARP---WILLSSP 175 G A +I +V+ QHIYGLLF++LW LCA RP F EDLQR + P W+ +SP Sbjct: 161 GSACMIGSVATQHIYGLLFRLLWPLCAARPFVRRQLPFAEDLQRASREYPSFAWV--ASP 218 Query: 176 AHLKRLPEQSTQPDARQLRAIFSSGGPLPAQAAADSARLLGQRPLEIYGSSETGGIAWRQ 235 A LKR+ + +R +FSSGG LPA+AA + LGQ P EI GSSETGGIAWRQ Sbjct: 219 ALLKRMGDNLDWSSLSAVRRVFSSGGALPAEAAQSLQQRLGQWPTEILGSSETGGIAWRQ 278 Query: 236 PQTDPLQRQEHWQAMPGVEVRLGAEGELEVRSPHLPDSAWFGMADRAALVPGQPGQFELR 295 + +HWQA GVE+ EG L + SP+LP AD A+ G G+FEL Sbjct: 279 GE-------QHWQAFDGVELSQNNEGALRISSPYLPPGHVEQTAD--AVQIGNDGRFELL 329 Query: 296 GRSDRIVKLEEKRISLTRIEQLLNASPLVEDVRVIVHQGRRARQFIAAFVVPSAPAHTML 355 GR DRIVKLEEKR+SL IEQ L V + R+ V Q RA + A +V S L Sbjct: 330 GRLDRIVKLEEKRVSLPLIEQALTTHEWVNEARLGVVQENRAS--LGALLVLSDAGLLAL 387 Query: 356 AAQGKLALP--LKAVLAGAIESIAVPRLWRYLPALPVNPQGKVTLSALTALLESPAAVSV 413 QG+ AL L+ L E+IA+PR WR L +P N QGK+ + LL + Sbjct: 388 RNQGRRALTEALRQYLRPHCETIALPRRWRLLRQMPFNAQGKLAQMDVQNLL-------M 440 Query: 414 VSAPTLPQVSELERSSEHVQLALDIPADLLYFRGHFPGSPILPGVVQTDWSLALGRRYFD 473 S P PQV + + + L L +P DL +F GHFP +P+LPGVVQ +W+++LG+R + Sbjct: 441 ASRPRQPQVLDQQTVDGELHLQLMVPPDLAFFSGHFPKAPVLPGVVQVEWAISLGQRLLN 500 Query: 474 LPPHFLGLQALKFQRVITPGMRVLLDLQFEAGKSQLSFRLH-SEGGQHASGRFLL 527 LP F G++ LKFQ+++ PG R+ L L+F+A +S+L F H SE +SGR +L Sbjct: 501 LPTDFAGMEVLKFQQLVRPGDRLKLTLRFDAARSKLHFAFHNSENAPCSSGRIVL 555 >ref|ZP_07266173.1| AMP-dependent synthetase and ligase [Pseudomonas syringae pv. syringae 642] Length = 560 Score = 348 bits (894), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 232/536 (43%), Positives = 306/536 (57%), Gaps = 38/536 (7%) Query: 1 MALFHHDTLQFAAALFAIWLAGKTAYLPSDALPDTCRQLQGEVDAFLGEFGAHCPALHPA 60 +A+ D A ALFA W AG LP+D T + +VD +L + Sbjct: 49 LAVHLEDAADLAIALFAAWRAGVHVLLPADLQGQTRERWANQVDLWLTDL---------P 99 Query: 61 GDAAEGD---TPDAWPALRADFAGLVVYTSGSTGLAQAIPKQLGQMANEVATLEALFGAI 117 GD D TP AL D L + TSGS+G + I K+L Q+ANEV LE L+GA Sbjct: 100 GDTHLSDLRATPLPAAALDLDQCRLSLCTSGSSGEPKLIEKRLRQLANEVCGLEQLWGAG 159 Query: 118 VGEAEVIATVSHQHIYGLLFKVLWALCAGRPVHAGSAFFPEDLQRMAGARP---WILLSS 174 +G A +I +V+ QHIYGLLF++LW LCA RP F EDLQR + P W+ +S Sbjct: 160 LGSACMIGSVATQHIYGLLFRLLWPLCAARPFVRRQLPFAEDLQRASREYPSFAWV--AS 217 Query: 175 PAHLKRLPEQSTQPDARQLRAIFSSGGPLPAQAAADSARLLGQRPLEIYGSSETGGIAWR 234 PA LKR+ + P +R +FSSGG LPA+AA + LGQ P EI GSSETGGIAWR Sbjct: 218 PALLKRMGDNLDWPGLAAVRRVFSSGGALPAEAAQSLQQRLGQWPTEILGSSETGGIAWR 277 Query: 235 QPQTDPLQRQEHWQAMPGVEVRLGAEGELEVRSPHLPDSAWFGMADRAALVPGQPGQFEL 294 Q + WQA GVE+ A+G L + SP+LP AD AAL+ G G+FEL Sbjct: 278 QGG-------QRWQAFDGVELSQDAQGALRISSPYLPPGHVEQTAD-AALI-GADGRFEL 328 Query: 295 RGRSDRIVKLEEKRISLTRIEQLLNASPLVEDVRVIVHQGRRARQFIAAFVVPSAPAHTM 354 GR DRIVKLEEKR+SL IEQ L P V + R+ V Q RA + A +V S Sbjct: 329 LGRLDRIVKLEEKRVSLPLIEQALTTHPWVSEARLGVVQANRAS--LGALLVLSEAGLQA 386 Query: 355 LAAQGKLALP--LKAVLAGAIESIAVPRLWRYLPALPVNPQGKVTLSALTALLESPAAVS 412 L QG+ AL L+ L E+IA+PR WR L +P+N QGK+ SA+ LL +P + Sbjct: 387 LRNQGRRALTETLRQHLQPHCETIALPRRWRLLRQMPLNAQGKLPQSAVETLLLAPRSKQ 446 Query: 413 VVSAPTLPQVSELERSSEHVQLALDIPADLLYFRGHFPGSPILPGVVQTDWSLALGRRYF 472 P+V E + + L L +P DL +F GHFP +PILPGVVQ DW+++LG+ Sbjct: 447 -------PEVLEQQSVEGELHLQLSVPPDLAFFSGHFPKAPILPGVVQVDWAISLGQSLL 499 Query: 473 DLPPHFLGLQALKFQRVITPGMRVLLDLQFEAGKSQLSFRL-HSEGGQHASGRFLL 527 DLP F G++ LKFQ+++ PG R+ L L+F+A +S+L F +++ +SGR LL Sbjct: 500 DLPSGFAGMEVLKFQQLVRPGDRLTLTLRFDAARSKLHFAFRNADNAPCSSGRILL 555 >gb|EGH82803.1| AMP-binding enzyme family protein [Pseudomonas syringae pv. lachrymans str. M301315] Length = 560 Score = 348 bits (894), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 227/535 (42%), Positives = 302/535 (56%), Gaps = 36/535 (6%) Query: 1 MALFHHDTLQFAAALFAIWLAGKTAYLPSDALPDTCRQLQGEVDAFLGEFG--AHCPALH 58 +A+ D A ALF W AG LP+D T + VD +L + H LH Sbjct: 49 LAVHLEDAADLAVALFGAWRAGVHVLLPADLQGQTRERWANRVDLWLTDLAHDTHLSDLH 108 Query: 59 PAGDAAEGDTPDAWPALRADFAGLVVYTSGSTGLAQAIPKQLGQMANEVATLEALFGAIV 118 A A AL D L + TSGS+G + I K+L Q+ANEV LE L+GA + Sbjct: 109 AAQLAP--------AALDLDQCRLSLCTSGSSGEPKLIEKRLRQLANEVCGLEQLWGAQL 160 Query: 119 GEAEVIATVSHQHIYGLLFKVLWALCAGRPVHAGSAFFPEDLQRMAGARP---WILLSSP 175 G A +I +V+ QHIYGLLF++LW LCA RP F EDLQR + P W+ +SP Sbjct: 161 GSACMIGSVATQHIYGLLFRLLWPLCAARPFMRRQLPFAEDLQRASREYPSFAWV--ASP 218 Query: 176 AHLKRLPEQSTQPDARQLRAIFSSGGPLPAQAAADSARLLGQRPLEIYGSSETGGIAWRQ 235 A LKR+ + +R +FSSGG LPA+AA + LGQ P EI GSSETGGIAWRQ Sbjct: 219 ALLKRMGDNLDWSSLSAVRRVFSSGGALPAEAAQSLQQRLGQWPTEILGSSETGGIAWRQ 278 Query: 236 PQTDPLQRQEHWQAMPGVEVRLGAEGELEVRSPHLPDSAWFGMADRAALVPGQPGQFELR 295 + +HWQA GVE+ EG L + SP+LP AD A+ G G+FEL Sbjct: 279 GK-------QHWQAFDGVELSQNNEGALRISSPYLPPGHVEQTAD--AVQIGNDGRFELL 329 Query: 296 GRSDRIVKLEEKRISLTRIEQLLNASPLVEDVRVIVHQGRRARQFIAAFVVPSAPAHTML 355 GR DRIVKLEEKR+SL IEQ L V + R+ V Q RA + A +V S L Sbjct: 330 GRLDRIVKLEEKRVSLPLIEQALTTHEWVNEARLGVVQENRAS--LGALLVLSDAGLLAL 387 Query: 356 AAQGKLALP--LKAVLAGAIESIAVPRLWRYLPALPVNPQGKVTLSALTALLESPAAVSV 413 QG+ AL L+ L E+IA+PR WR L +P+N QGK+ + + ALL +P + Sbjct: 388 RNQGRRALTEALRQHLRPHCETIALPRRWRLLRQVPLNAQGKLPQAEVEALLLAPRSKQ- 446 Query: 414 VSAPTLPQVSELERSSEHVQLALDIPADLLYFRGHFPGSPILPGVVQTDWSLALGRRYFD 473 P+V E + + L L +P DL +F GHFP +P+LPGVVQ +W+++LG+R + Sbjct: 447 ------PEVLEQQNIEGELHLQLSVPPDLAFFSGHFPKAPVLPGVVQVEWAISLGQRLLN 500 Query: 474 LPPHFLGLQALKFQRVITPGMRVLLDLQFEAGKSQLSFRLH-SEGGQHASGRFLL 527 LP F G++ LKFQ+++ PG R+ L L+F+A +S+L F H SE +SGR +L Sbjct: 501 LPTDFAGMEVLKFQQLVRPGDRLKLTLRFDAARSKLHFAFHNSENAPCSSGRIVL 555 >ref|YP_002030302.1| AMP-dependent synthetase and ligase [Stenotrophomonas maltophilia R551-3] gb|ACF53619.1| AMP-dependent synthetase and ligase [Stenotrophomonas maltophilia R551-3] Length = 561 Score = 347 bits (891), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 229/518 (44%), Positives = 299/518 (57%), Gaps = 33/518 (6%) Query: 19 WLAGKTAYLPSDALPDTCRQLQGEVDAFLGEFGAHCPALHPAGDAAEGDTPD-AWPALRA 77 W AGK +L +D LP T + LQ +V F G+ A L AA G T D AL Sbjct: 70 WHAGKRVFLAADNLPATLQALQPQVSGFAGDVSADYRPL-----AALGATSDEGLQALDE 124 Query: 78 DFAGLVVYTSGSTGLAQAIPKQLGQMANEVATLEALFGAIVGEAEVIATVSHQHIYGLLF 137 L V+TSGSTG AI K++ Q+ EV L+A FG + +V TVSHQHIYGLLF Sbjct: 125 RACELCVFTSGSTGQPSAINKRMDQLTREVDALQAAFGTQLEGVQVHGTVSHQHIYGLLF 184 Query: 138 KVLWALCAGRPVHAGSAFFPEDLQRMAGARPWILLSSPAHLKRLPEQSTQPDAR-QLRAI 196 +VLW L AGR +H FF EDL +L+++PAHLKRLPEQ +LRA+ Sbjct: 185 RVLWPLAAGRLIHP-RRFFHEDLVGALAGTDTVLVATPAHLKRLPEQLDWASLHGRLRAV 243 Query: 197 FSSGGPLPAQAAADSARLLGQRPLEIYGSSETGGIAWRQPQTDPLQRQEHWQAMPGVEVR 256 FSSGGPLP +AA + LG P E+YGSSETGGIAWR+ TD WQ +PGV+ R Sbjct: 244 FSSGGPLPEEAARQVRQWLGVAPTEVYGSSETGGIAWRRWDTD----LPPWQPLPGVQWR 299 Query: 257 LGAEGELEVRSPHLPDSAWFGMADRAALVPGQPGQFELRGRSDRIVKLEEKRISLTRIEQ 316 + EG L V S HL W+ DR + G+F L GR+DRIVK+EE+R+SL +E+ Sbjct: 300 I-EEGCLAVASAHLETPDWWRTQDRVEALAD--GRFRLLGRADRIVKIEERRVSLDALER 356 Query: 317 LLNASPLVEDVRVIVHQGRRARQFIAAFVVPSAPAHTML----AAQGKLALPLKAVLAGA 372 L V+DVRV+V G+R + +AA VVP+ P T+L AA+ L L A LA A Sbjct: 357 ALREDAEVDDVRVLVLPGQREQ--LAAVVVPADP--TLLEGGEAARRALGQRLGARLAQA 412 Query: 373 IESIAVPRLWRYLPALPVNPQGKVTLSALTALLESPAAVSVVSAPTLPQVSELERSSEHV 432 +++ PR WR +PALP+N QGKVT +AL AL + P +P R + Sbjct: 413 HDAVTRPRRWRLVPALPINAQGKVTQAALAALFQ----------PLMPVPVWDHRDAASA 462 Query: 433 QLALDIPADLLYFRGHFPGSPILPGVVQTDWSLALGRRYFDLPPHFLGLQALKFQRVITP 492 L + + L F+GHFP + ILPGV Q DW++ GR+ F +P FL + A+KFQ V P Sbjct: 463 TLRMTLDPALRPFQGHFPQAAILPGVAQLDWAVRFGRQVFAMPAAFLRMDAVKFQHVARP 522 Query: 493 GMRVLLDLQFEAGKSQLSFRLHSEGGQHASGRFLLGAA 530 G + L L ++A +S L+FR S G HASG+ + A Sbjct: 523 GEELTLQLDWDATRSVLAFRYTSSHGVHASGKVVFADA 560