BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0036.0085.p (147 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777103.1| excinuclease ATPase subunit [Herbaspirillum ... 291 3e-77 ref|YP_004754207.1| excinuclease ATPase subunit [Collimonas fung... 157 5e-37 ref|YP_346154.1| hypothetical protein Pfl01_0421 [Pseudomonas fl... 144 7e-33 ref|YP_004229152.1| excinuclease, ATPase subunit [Burkholderia s... 143 7e-33 ref|ZP_02884834.1| putative excinuclease, ATPase subunit [Burkho... 141 3e-32 ref|YP_004351587.1| hypothetical protein PSEBR_a439 [Pseudomonas... 140 6e-32 ref|YP_003907889.1| putative excinuclease, ATPase subunit [Burkh... 137 7e-31 ref|ZP_06687145.1| excinuclease ATPase subunit [Achromobacter pi... 136 9e-31 ref|ZP_06842829.1| putative excinuclease, ATPase subunit [Burkho... 135 2e-30 ref|YP_560055.1| putative excinuclease, ATPase subunit [Burkhold... 135 2e-30 >ref|YP_003777103.1| excinuclease ATPase subunit [Herbaspirillum seropedicae SmR1] gb|ADJ65195.1| excinuclease ATPase subunit protein [Herbaspirillum seropedicae SmR1] Length = 147 Score = 291 bits (745), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 143/147 (97%), Positives = 143/147 (97%) Query: 1 MKISSLALAVTLALSAALPAQARDTKHLLPLDSASSMKDKEGVLDGSVKFYFAGQPHPAV 60 MK SSLALAVTLALSAALPAQARDTKHLLPLDSASSMKDKEGVLDGSVKFYFAGQPHPAV Sbjct: 1 MKTSSLALAVTLALSAALPAQARDTKHLLPLDSASSMKDKEGVLDGSVKFYFAGQPHPAV 60 Query: 61 LEKISTDVTNQKTNAFGKSDEEACKWVFLSALVQLHKKAKELGGNGVVNIVSYYKKNEMA 120 LEKISTDVTN KTNAFGKSDEEACKW FLS LVQLHKKAKELGGNGVVNIVSYYKKNEMA Sbjct: 61 LEKISTDVTNMKTNAFGKSDEEACKWAFLSGLVQLHKKAKELGGNGVVNIVSYYKKNEMA 120 Query: 121 SATEFECHAGATMAGVALKGDIVKLGK 147 SATEFECHAGATMAGVALKGDIVKLGK Sbjct: 121 SATEFECHAGATMAGVALKGDIVKLGK 147 >ref|YP_004754207.1| excinuclease ATPase subunit [Collimonas fungivorans Ter331] gb|AEK63384.1| excinuclease ATPase subunit [Collimonas fungivorans Ter331] Length = 171 Score = 157 bits (397), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 75/134 (55%), Positives = 96/134 (71%) Query: 14 LSAALPAQARDTKHLLPLDSASSMKDKEGVLDGSVKFYFAGQPHPAVLEKISTDVTNQKT 73 L +A+ AQA D +LP+ A ++ D +G L SV+FYF Q P VLEK + T+Q+T Sbjct: 38 LLSAVSAQAADRTLMLPVAGALAVNDAQGRLGDSVRFYFGDQRTPKVLEKFGGEKTSQRT 97 Query: 74 NAFGKSDEEACKWVFLSALVQLHKKAKELGGNGVVNIVSYYKKNEMASATEFECHAGATM 133 NAFGKSDE+AC WVFLSA++ L ++A++LG N VVNIVS Y E ASATEFECH GA M Sbjct: 98 NAFGKSDEKACNWVFLSAMLHLQQRAQDLGANAVVNIVSNYNNVEHASATEFECHVGAIM 157 Query: 134 AGVALKGDIVKLGK 147 AGVALKG+ ++ K Sbjct: 158 AGVALKGEFARIAK 171 >ref|YP_346154.1| hypothetical protein Pfl01_0421 [Pseudomonas fluorescens Pf0-1] gb|ABA72165.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1] Length = 146 Score = 144 bits (362), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 76/138 (55%), Positives = 92/138 (66%), Gaps = 4/138 (2%) Query: 8 LAVTLALSAALPA--QARDTKHLLPLDSASSMKDKEGVLDGSVKFYFAGQPHPAVLEKIS 65 LA TL L A+PA QARDT LP D A + + G +DGSVKFY AG + +S Sbjct: 6 LAATL-LICAMPAVSQARDTAVYLPFDKAVAEATRTGKIDGSVKFYLAGNAPAGKVTVVS 64 Query: 66 TD-VTNQKTNAFGKSDEEACKWVFLSALVQLHKKAKELGGNGVVNIVSYYKKNEMASATE 124 VTN+KTNAF K+D+EAC+WV SA++ LH+ AK G N V NIVS+YK NE A Sbjct: 65 PGAVTNKKTNAFNKTDQEACEWVVQSAIISLHQAAKNAGANAVTNIVSFYKSNERKDAKT 124 Query: 125 FECHAGATMAGVALKGDI 142 +ECHAGA MAGVALKGD+ Sbjct: 125 YECHAGAIMAGVALKGDL 142 >ref|YP_004229152.1| excinuclease, ATPase subunit [Burkholderia sp. CCGE1001] gb|ADX56092.1| putative excinuclease, ATPase subunit [Burkholderia sp. CCGE1001] Length = 150 Score = 143 bits (361), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 75/147 (51%), Positives = 99/147 (67%), Gaps = 2/147 (1%) Query: 1 MKISSLALAVTLALSAALPAQARDTKHLLPLDSASSMKDKEGVLDGSVKFYFAGQPHPAV 60 M ++S+A A +L L +A PA ARDT P++ A + + G + + YFAGQ HPAV Sbjct: 6 MFVTSIAFAASLTLLSAAPAFARDTVGNYPIEEA--LHSEPGKVGDDIALYFAGQHHPAV 63 Query: 61 LEKISTDVTNQKTNAFGKSDEEACKWVFLSALVQLHKKAKELGGNGVVNIVSYYKKNEMA 120 ++ I TN+KTNAFGKSD AC+ VFLSA+++L +A++ GGN V+NI S YK Sbjct: 64 VKTIGEFATNKKTNAFGKSDAAACQHVFLSAVIELQDRARKEGGNAVINIKSNYKNEVRE 123 Query: 121 SATEFECHAGATMAGVALKGDIVKLGK 147 SATEF C AGA +AGVALKGD+V L K Sbjct: 124 SATEFTCGAGAVIAGVALKGDVVTLRK 150 >ref|ZP_02884834.1| putative excinuclease, ATPase subunit [Burkholderia graminis C4D1M] gb|EDT09628.1| putative excinuclease, ATPase subunit [Burkholderia graminis C4D1M] Length = 147 Score = 141 bits (356), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 73/143 (51%), Positives = 96/143 (67%), Gaps = 2/143 (1%) Query: 5 SLALAVTLALSAALPAQARDTKHLLPLDSASSMKDKEGVLDGSVKFYFAGQPHPAVLEKI 64 S+ LA + + +A PA ARDT P++ A + + G + + YFAGQ HPAV +KI Sbjct: 7 SVTLAASFTMLSAAPAFARDTVENYPIEPA--LHSEPGKVSDDIALYFAGQRHPAVAKKI 64 Query: 65 STDVTNQKTNAFGKSDEEACKWVFLSALVQLHKKAKELGGNGVVNIVSYYKKNEMASATE 124 TN+KTNAFGKSD +AC+ VFLSA+++L +A++ GGN V+NI S YK SATE Sbjct: 65 GEFATNKKTNAFGKSDTDACQHVFLSAVIELQDRARKEGGNAVINIKSNYKNEVRESATE 124 Query: 125 FECHAGATMAGVALKGDIVKLGK 147 F C AGA +AGVALKGD+V L K Sbjct: 125 FTCGAGAVIAGVALKGDVVTLRK 147 >ref|YP_004351587.1| hypothetical protein PSEBR_a439 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gb|AEA66583.1| Conserved hypothetical protein; putative exported protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 148 Score = 140 bits (353), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 70/126 (55%), Positives = 83/126 (65%), Gaps = 1/126 (0%) Query: 21 QARDTKHLLPLDSASSMKDKEGVLDGSVKFYFAGQPHPAVLEKISTD-VTNQKTNAFGKS 79 QARDT LP D + + G +DGSVKFY AG + +S VTN+KTNAF KS Sbjct: 22 QARDTALFLPFDKVVAEAIRTGKIDGSVKFYLAGNKPAGNVTVVSPGAVTNKKTNAFNKS 81 Query: 80 DEEACKWVFLSALVQLHKKAKELGGNGVVNIVSYYKKNEMASATEFECHAGATMAGVALK 139 DE AC+WV SAL+ LH+ AK G N V NIVS+YK NE T +ECHAGA MAGVALK Sbjct: 82 DEVACEWVLQSALISLHQAAKNAGANAVTNIVSFYKSNERKDPTTYECHAGAIMAGVALK 141 Query: 140 GDIVKL 145 GD+ K+ Sbjct: 142 GDLAKV 147 >ref|YP_003907889.1| putative excinuclease, ATPase subunit [Burkholderia sp. CCGE1003] gb|ADN58598.1| putative excinuclease, ATPase subunit [Burkholderia sp. CCGE1003] Length = 147 Score = 137 bits (344), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 70/142 (49%), Positives = 95/142 (66%), Gaps = 2/142 (1%) Query: 6 LALAVTLALSAALPAQARDTKHLLPLDSASSMKDKEGVLDGSVKFYFAGQPHPAVLEKIS 65 + LA + ++ + PA ARDT P++ A + + G + + YFAGQ HPAV++ I Sbjct: 8 VTLAASFSMLSTAPALARDTVANYPIEQA--LHSEPGKVSDDIALYFAGQRHPAVVKSIG 65 Query: 66 TDVTNQKTNAFGKSDEEACKWVFLSALVQLHKKAKELGGNGVVNIVSYYKKNEMASATEF 125 TN+KTNAFGKSDE AC+ VFLSA+++L ++A++ GGN V+NI S YK SATEF Sbjct: 66 EFATNKKTNAFGKSDEAACQHVFLSAVIELQERARKEGGNAVINIKSNYKNEVRESATEF 125 Query: 126 ECHAGATMAGVALKGDIVKLGK 147 C AGA +AGVALKG +V L K Sbjct: 126 TCGAGAVIAGVALKGAVVTLRK 147 >ref|ZP_06687145.1| excinuclease ATPase subunit [Achromobacter piechaudii ATCC 43553] gb|EFF75995.1| excinuclease ATPase subunit [Achromobacter piechaudii ATCC 43553] Length = 146 Score = 136 bits (343), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 75/147 (51%), Positives = 97/147 (65%), Gaps = 4/147 (2%) Query: 1 MKISS-LALAVTLALSAALPAQARDTKHLLPLDSASSMKDKEGVLDGSVKFYFAGQ-PHP 58 MKI+ L A++L+L+ + A D LPL A G +DGSVKFY AG P Sbjct: 1 MKITCKLFGALSLSLACSTQVLAADRTVFLPLQPAIEAAQAAGKIDGSVKFYLAGTGPKG 60 Query: 59 AVLEKISTDVTNQKTNAFGKSDEEACKWVFLSALVQLHKKAKELGGNGVVNIVSYYKKNE 118 VLE + VTN+KTNAF K D EAC WV SA++ LH+ AK+ G N V NIVSYY+KNE Sbjct: 61 QVLE--AGVVTNRKTNAFAKKDPEACLWVAQSAVIALHEAAKKAGANAVTNIVSYYRKNE 118 Query: 119 MASATEFECHAGATMAGVALKGDIVKL 145 +S T++ECHAGA +AGVAL+GD+ ++ Sbjct: 119 YSSKTDYECHAGAMVAGVALRGDLARV 145 >ref|ZP_06842829.1| putative excinuclease, ATPase subunit [Burkholderia sp. Ch1-1] gb|EFG69553.1| putative excinuclease, ATPase subunit [Burkholderia sp. Ch1-1] Length = 147 Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 71/141 (50%), Positives = 95/141 (67%), Gaps = 2/141 (1%) Query: 7 ALAVTLALSAALPAQARDTKHLLPLDSASSMKDKEGVLDGSVKFYFAGQPHPAVLEKIST 66 AL + A +A PA ARDT + PLD A + + G + V YFAGQ HPAV++ + Sbjct: 9 ALFASFATLSAAPAFARDTVNYYPLDQA--LHSEPGKVSDDVALYFAGQHHPAVVKTMGE 66 Query: 67 DVTNQKTNAFGKSDEEACKWVFLSALVQLHKKAKELGGNGVVNIVSYYKKNEMASATEFE 126 TN+KTNAFGKSD +AC+ VFLSA+++L ++A++ GGN V+NI S YK SATE+ Sbjct: 67 FATNKKTNAFGKSDLQACQHVFLSAVIELQERARKEGGNAVINIKSNYKNELRESATEYT 126 Query: 127 CHAGATMAGVALKGDIVKLGK 147 C AGA +AGVAL G++V L K Sbjct: 127 CGAGAVIAGVALTGEVVTLRK 147 >ref|YP_560055.1| putative excinuclease, ATPase subunit [Burkholderia xenovorans LB400] gb|ABE32003.1| Putative excinuclease, ATPase subunit [Burkholderia xenovorans LB400] Length = 147 Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 70/141 (49%), Positives = 96/141 (68%), Gaps = 2/141 (1%) Query: 7 ALAVTLALSAALPAQARDTKHLLPLDSASSMKDKEGVLDGSVKFYFAGQPHPAVLEKIST 66 AL + A +A PA ARDT + P+D A ++ + G + V YFAGQ HPAV++ + Sbjct: 9 ALFASFATLSAAPAFARDTVNYYPVDQA--LQSEPGKVSDDVALYFAGQHHPAVVKTMGE 66 Query: 67 DVTNQKTNAFGKSDEEACKWVFLSALVQLHKKAKELGGNGVVNIVSYYKKNEMASATEFE 126 TN+KTNAFGKSD +AC+ VFLSA+++L ++A++ GGN V+NI S YK SATE+ Sbjct: 67 FATNKKTNAFGKSDLQACQHVFLSAVIELQERARKEGGNAVINIKSNYKNELRESATEYT 126 Query: 127 CHAGATMAGVALKGDIVKLGK 147 C AGA +AGVAL G++V L K Sbjct: 127 CGAGAVIAGVALTGEVVTLRK 147