BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0036.0072.p (765 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777115.1| hypothetical protein Hsero_3729 [Herbaspiril... 1551 0.0 ref|ZP_08275168.1| multi-sensor hybrid histidine kinase [Oxaloba... 600 e-169 ref|YP_283461.1| response regulator receiver:ATP-binding region,... 425 e-116 ref|YP_568635.1| multi-sensor hybrid histidine kinase [Rhodopseu... 365 2e-98 ref|YP_533651.1| multi-sensor hybrid histidine kinase [Rhodopseu... 345 2e-92 ref|YP_003796498.1| putative hybrid histidine kinase [Candidatus... 339 9e-91 ref|YP_001208811.1| sensor histidine kinase [Bradyrhizobium sp. ... 334 4e-89 ref|YP_001236704.1| multi-sensor hybrid histidine kinase [Bradyr... 333 1e-88 ref|YP_423098.1| Signal transduction histidine kinase [Magnetosp... 332 2e-88 ref|YP_487456.1| multi-sensor hybrid histidine kinase [Rhodopseu... 328 2e-87 >ref|YP_003777115.1| hypothetical protein Hsero_3729 [Herbaspirillum seropedicae SmR1] gb|ADJ65207.1| hypothetical protein Hsero_3729 [Herbaspirillum seropedicae SmR1] Length = 765 Score = 1551 bits (4016), Expect = 0.0, Method: Compositional matrix adjust. Identities = 758/765 (99%), Positives = 761/765 (99%) Query: 1 MNEPLPTDQRKTPRMRISALTVGALLLILLTVTVIVSGTLLYRASLNDWRNDLSTLSTVL 60 MNEPLP DQRKTPRMRISALTVGALLLILLTVTVIVSGTLLYRASLNDWRNDLSTLSTVL Sbjct: 1 MNEPLPNDQRKTPRMRISALTVGALLLILLTVTVIVSGTLLYRASLNDWRNDLSTLSTVL 60 Query: 61 AENTAQTMSSARLVIDSIQADIEQANPADQQQLQRHVGSVEFSQIMREKIRGLPFISGIG 120 AENTAQTMSSARLVIDSIQADIEQANP DQQQLQRHVGSVEFSQIMREKIRGLPFISGIG Sbjct: 61 AENTAQTMSSARLVIDSIQADIEQANPTDQQQLQRHVGSVEFSQIMREKIRGLPFISGIG 120 Query: 121 VANAEGRILALSRVYPAPPIDLTDRDYYLYHRNSDSTADFVGETVLSRAGGVPTFYVSRR 180 VANAEGRILALSRVYPAPPIDLTDRDYYL+HR+SDSTADFVGETVLSRAGGVPTFYVSRR Sbjct: 121 VANAEGRILALSRVYPAPPIDLTDRDYYLHHRSSDSTADFVGETVLSRAGGVPTFYVSRR 180 Query: 181 VNDRQGRLLAIIVIGLPCAFFETFFDNVTRDKPFSIVLARKDGKTLTSTDLLPEQGQRRS 240 VNDRQGRLLAIIVIGLPCAFFETFFDNVTRDKPFSIVLARKDGKTLTSTDLLPEQGQRRS Sbjct: 181 VNDRQGRLLAIIVIGLPCAFFETFFDNVTRDKPFSIVLARKDGKTLTSTDLLPEQGQRRS 240 Query: 241 ITPLAQLHPSMPADDEGRQSHVFMQSHWLGIHRPVRNWPMYLEIGVTDEVYFGEWMESMY 300 ITPLAQLHPSMPADDEGRQSHVFMQSHWLGIHRPVRNWPMYLEIGVTDEVYFGEWMESMY Sbjct: 241 ITPLAQLHPSMPADDEGRQSHVFMQSHWLGIHRPVRNWPMYLEIGVTDEVYFGEWMESMY 300 Query: 301 PLMLVAAISLVGLIGGFVLTWRQVRRREEDALLATRLKEEADHANEAKSHFLAMVSHEIR 360 PLMLVAAISLVGLIGGFVLTWRQVRRREEDALLATRLKEEADHANEAKSHFLAMVSHEIR Sbjct: 301 PLMLVAAISLVGLIGGFVLTWRQVRRREEDALLATRLKEEADHANEAKSHFLAMVSHEIR 360 Query: 361 TPMNGILGLSELLMESGLSSKQRDYADSIHGATGGLVRIINDILDFSKIESGKLDLEMVA 420 TPMNGILGLSELLMESGLSSKQRDYADSIHGATGGLVRIINDILDFSKIESGKLDLEMVA Sbjct: 361 TPMNGILGLSELLMESGLSSKQRDYADSIHGATGGLVRIINDILDFSKIESGKLDLEMVA 420 Query: 421 FHPVRLVQELSDLYRPSLQRKDVQFDLHLDCPENLSVVGDPARLKQVLGNLLSNAIKFTQ 480 FHPVRLVQELSDLYRPSLQRKDVQFDLHLDCPENLSVVGDPARLKQVLGNLLSNAIKFTQ Sbjct: 421 FHPVRLVQELSDLYRPSLQRKDVQFDLHLDCPENLSVVGDPARLKQVLGNLLSNAIKFTQ 480 Query: 481 AGHVQLSMSARQDESGPSRWRLFFAITDTGIGISPEALQQLFRPFAQADSSISRRFGGTG 540 AGHVQLSMSARQDESGPSRWRLFFAITDTGIGISPEALQQLFRPFAQADSSISRRFGGTG Sbjct: 481 AGHVQLSMSARQDESGPSRWRLFFAITDTGIGISPEALQQLFRPFAQADSSISRRFGGTG 540 Query: 541 LGLAISKNLVELMGGTIACQSIPGESTRFSFELGCAEASTPAPEPVSEAAAPAPATALAT 600 LGLAISKNLVELMGGTIACQSIPGESTRFSFE+ C EASTPAPEPVSEAAAPAPATALAT Sbjct: 541 LGLAISKNLVELMGGTIACQSIPGESTRFSFEILCPEASTPAPEPVSEAAAPAPATALAT 600 Query: 601 TAPALPPAAEAPGTLMPPDNAPQPPSNVDASATVLPSLLAGARILMAEDTEINRQLLRIL 660 TAPALPPAAEAPGTLMPPDNAPQPPSNVDASATVLPSLLAGARILMAEDTEINRQLLRIL Sbjct: 601 TAPALPPAAEAPGTLMPPDNAPQPPSNVDASATVLPSLLAGARILMAEDTEINRQLLRIL 660 Query: 661 LARKGCILQEVENGLQAVEAIRTGHYDLVLMDCMMPIMDGYQATAEIRAHEAARGLPRTP 720 LARKGCILQEVENGLQAVEAIRTGHYDLVLMDCMMPIMDGYQATAEIRAHEAARGLPRTP Sbjct: 661 LARKGCILQEVENGLQAVEAIRTGHYDLVLMDCMMPIMDGYQATAEIRAHEAARGLPRTP 720 Query: 721 IIALTASAIEGDRQRCLDAGMDDYLSKPFTQVGLMQTVEKWLQKS 765 IIALTASAIEGDRQRCLDAGMDDYLSKPFTQVGLMQTVEKWLQKS Sbjct: 721 IIALTASAIEGDRQRCLDAGMDDYLSKPFTQVGLMQTVEKWLQKS 765 >ref|ZP_08275168.1| multi-sensor hybrid histidine kinase [Oxalobacteraceae bacterium IMCC9480] gb|EGF31363.1| multi-sensor hybrid histidine kinase [Oxalobacteraceae bacterium IMCC9480] Length = 732 Score = 600 bits (1547), Expect = e-169, Method: Compositional matrix adjust. Identities = 323/766 (42%), Positives = 465/766 (60%), Gaps = 59/766 (7%) Query: 10 RKTPRMRISALTVGALLLILLTVTVIVSGTLLYRASLNDWRNDLSTLSTVLAENTAQTMS 69 RK+ R + +G+LL++LL + S +L ++ DWR DL LS V+AENT+QTM+ Sbjct: 8 RKSSSARHATAIIGSLLIVLLIAATVASSWVLRDRAIEDWRRDLGNLSLVMAENTSQTMA 67 Query: 70 SARLVIDSIQADIEQANPADQQQLQRHVGSVEFSQIMREKIRGLPFISGIGVANAEGRIL 129 SA LV+DSI +E A ++Q L + + Q MR+K+ GLP I + + A G ++ Sbjct: 68 SAYLVLDSIGELVENAGISNQADLSKAFHNAATYQTMRDKVSGLPQIDVVTIVGANGDVI 127 Query: 130 ALSRVYPAPPIDLTDRDYYLYHRNSDSTADFVGETVLSRAGGVPTFYVSRRVNDRQGRLL 189 +R +PAP I+L +RDY+ +HR + A F+ V ++ G TFY+SRRVN +G+ L Sbjct: 128 NFTRAFPAPAINLANRDYFAHHRGNVDPAVFLSTPVKNKGNGKWTFYISRRVNSNEGQFL 187 Query: 190 AIIVIGLPCAFFETFFDNVTRDKPFSIVLARKD----------GKTLTSTDLLPEQGQRR 239 ++++G+ C FF FF NV+ + S+ L R+D K + + +LL G Sbjct: 188 GMVLVGISCDFFADFFKNVSLGEEASVSLLRRDYTLLARWPDADKLMGTRNLL---GATH 244 Query: 240 SITPLAQLH----PSMPADDEGRQSHVFMQSHWLGIHRPVRNWPMYLEIGVTDEVYFGEW 295 ++ + H + P +G Q Q+ +G R VR +P+ + I +T+++Y W Sbjct: 245 TVLEAGKTHDVILTNAPRPIDGMQ-----QTPRMGAVRLVRGYPLAVNITITEDLYLSSW 299 Query: 296 MESMYPLMLVAAISLVGLIGGFVLTWRQVRRREEDALLATRLKEEADHANEAKSHFLAMV 355 ++ L + +SL+ L G F+L ++RRE+DA A LK EA+ AN AKS FLAM+ Sbjct: 300 RSTVRLLGGIGLVSLLALCGAFILMAIILKRREQDAEQALTLKREAEEANTAKSSFLAMM 359 Query: 356 SHEIRTPMNGILGLSELLMESGLSSKQRDYADSIHGATGGLVRIINDILDFSKIESGKLD 415 SHEIRTPMNGILG++EL++++ L + QR YA +++ L+RIIN+ILDFSK+ESG ++ Sbjct: 360 SHEIRTPMNGILGMAELMLDTPLDASQRTYAGNVYNGAHHLMRIINEILDFSKVESGYME 419 Query: 416 LEMVAFHPVRLVQELSDLYRPSLQRKDVQFDLHLDCPENLSVVGDPARLKQVLGNLLSNA 475 +++ F P RL+ E+ L+R K +Q + L V D +R++QVLGNL++NA Sbjct: 420 IDLTTFDPTRLIGEVIGLHRNGATAKQLQIRTEIAPAAALLVSADASRIRQVLGNLINNA 479 Query: 476 IKFTQAGHVQLSMSARQDESGPSRWRLFFAITDTGIGISPEALQQLFRPFAQADSSISRR 535 IKFT AG + + A D + ++ +L F++ D+GIGIS EA Q+LF PF QAD++ISR+ Sbjct: 480 IKFTPAGAITVRFVALPDPADATQVQLEFSVADSGIGISAEAQQRLFEPFVQADNTISRK 539 Query: 536 FGGTGLGLAISKNLVELMGGTIACQSIPGESTRFSFELGCAEASTPAPEPVSEAAAPAPA 595 +GGTGLGLAI K LVELM G I C+S G TRFSF + + +PV+ A P P Sbjct: 540 YGGTGLGLAICKRLVELMRGDIRCESDIGAGTRFSFRI----PARMVEQPVTIAPLPVPV 595 Query: 596 TALATTAPALPPAAEAPGTLMPPDNAPQPPSNVDASATVLPSLLAGARILMAEDTEINRQ 655 T A PP E N+ Q R+L+ EDTE+NRQ Sbjct: 596 T-------AAPPTQE---------NSVQ-----------------ALRVLVVEDTEMNRQ 622 Query: 656 LLRILLARKGCILQEVENGLQAVEAIRTGHYDLVLMDCMMPIMDGYQATAEIRAHEAARG 715 L+RILL ++GCI++E NG A+EA+ YDLVLMDCMMP+MDGY+AT +R EA G Sbjct: 623 LVRILLGKRGCIVEEAVNGQLALEALALKRYDLVLMDCMMPVMDGYEATRRLREREAESG 682 Query: 716 LPRTPIIALTASAIEGDRQRCLDAGMDDYLSKPFTQVGLMQTVEKW 761 R P+IALTASAIEGDR+RCL+AGMDDYL+KPF+ L +EKW Sbjct: 683 AARMPVIALTASAIEGDRERCLEAGMDDYLAKPFSAAQLTAVIEKW 728 >ref|YP_283461.1| response regulator receiver:ATP-binding region, ATPase-like:histidine kinase A, N-terminal [Dechloromonas aromatica RCB] gb|AAZ44991.1| Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal [Dechloromonas aromatica RCB] Length = 738 Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust. Identities = 270/759 (35%), Positives = 404/759 (53%), Gaps = 69/759 (9%) Query: 23 GALLLILLTVTVIVSGTLLYRASLNDWRNDLSTLSTVLAENTAQTMSSARLVIDSIQADI 82 G ++LI + V V+ + ++DWR + +S +LAE+T+QT+ SA +V+DS+ + Sbjct: 18 GIVILIAMLAAVAVAVKAMRDQEIDDWRQQMGNMSLILAEHTSQTILSAYVVLDSVTERV 77 Query: 83 EQANPADQQQLQRHVGSVEFSQIMREKIRGLPFISGIGVANAEGRILALSRVYPAPPIDL 142 QA DQ + + + E Q++R++IRGLP + + A G + SR YP P I+L Sbjct: 78 RQAKVTDQASFRARLATPEMFQMLRDQIRGLPQVDVASIVAANGDNINFSRAYPIPAINL 137 Query: 143 TDRDYYLYHRNSDSTADFVGETVLSRAGGVPTFYVSRRVNDRQGRLLAIIVIGLPCAFFE 202 +RDY+ H ++ DF+ + V ++ G TFY+SRR+ND +G L ++++G+ F Sbjct: 138 AERDYFKAHLSNPGLGDFISQPVRNKGNGKWTFYISRRLNDAKGEFLGLVLVGISVEVFT 197 Query: 203 TFFDNVTRD--KPFSIVLARKDGKTLTSTDLLPEQGQRRSITPLAQLHPSMPADDEG--- 257 F+ V + + SI L R D LT E + + A ++ DEG Sbjct: 198 NFYQRVAHNLGEGASISLFRDDLTLLTRWPHRDEVIGTVNRSGTAYDVIAVLKQDEGVVL 257 Query: 258 RQSHVFMQSH---WLGIHRPVRNWPMYLEIGVTDEVYFGEWMESMYPLMLVAAISLVGLI 314 R + F + R + +P+ L I TD+++ W S + L+A +SLVG + Sbjct: 258 RDTPRFSTGKRELRVAAVRKIDRYPLVLAIVATDDLFLAGWRRSAW---LIAGVSLVGAM 314 Query: 315 G---GFVLTWRQVRRREEDALLATRLKEEADHANEAKSHFLAMVSHEIRTPMNGILGLSE 371 ++ R +R+RE D +LK A+ AN AKS FLA +SHEIRTPMNGILG+++ Sbjct: 315 SLLIVLLILVRNLRQREADMAEMEQLKLAAEAANLAKSSFLATMSHEIRTPMNGILGMAQ 374 Query: 372 LLMESGLSSKQR-DYADSIHGATGGLVRIINDILDFSKIESGKLDLEMVAFHPVRLVQEL 430 LL+ SG + +R +Y +I + L+ ++NDILD SK+E+GKL+L+ F P +++E+ Sbjct: 375 LLLMSGSAEDERHEYVRTILNSGQTLLSLLNDILDISKVEAGKLELKPAVFAPQGVIEEV 434 Query: 431 SDLYRPSLQRKDVQFDLHLDCPENLSVVGDPARLKQVLGNLLSNAIKFTQAGHVQLSMSA 490 L+ + K + P D RL+Q+L NLLSNA+KFT+ G +++ Sbjct: 435 VGLFFAQAEAKGLSITAQWHGPAVQRYRADQIRLRQILTNLLSNAVKFTKEGAIRIEARE 494 Query: 491 RQDESGPSRW-RLFFAITDTGIGISPEALQQLFRPFAQADSSISRRFGGTGLGLAISKNL 549 + E G W RL FA+ D+GIGI+PE LF+PF+Q DSS +R++GGTGLGL+I ++L Sbjct: 495 IEREDG---WARLEFAVIDSGIGIAPEKRALLFKPFSQLDSSATRQYGGTGLGLSIVRSL 551 Query: 550 VELMGGTIACQSIPGESTRFSFELGCA-----EASTPAPEPVSEAAAPAPATALATTAPA 604 ELMGG +S PG+ RF + E S PV APAP PA Sbjct: 552 AELMGGEAGVESQPGQGARFWVRIRAECLHENEESRSIERPV---VAPAP------VEPA 602 Query: 605 LPPAAEAPGTLMPPDNAPQPPSNVDASATVLPSLLAGARILMAEDTEINRQLLRILLARK 664 + +L+ ED NR+++ +L + Sbjct: 603 I-----------------------------------SGHVLVVEDNPTNRKVIEAMLRKL 627 Query: 665 GCILQEVENGLQAVEAIRTGHY-DLVLMDCMMPIMDGYQATAEIRAHEAARGLPRTPIIA 723 V+NG AV+ + G DLVLMD MP+MDG QAT IR EA GLPR PI+A Sbjct: 628 HIRSDSVDNGRAAVDTLEQGMRPDLVLMDVQMPVMDGIQATMLIRQREAETGLPRLPIVA 687 Query: 724 LTASAIEGDRQRCLDAGMDDYLSKPFTQVGLMQTVEKWL 762 LTA A + DRQ CL AGMDD++SKP L + + KW+ Sbjct: 688 LTAGAFDEDRQHCLVAGMDDFMSKPVNLNDLEKMLGKWM 726 >ref|YP_568635.1| multi-sensor hybrid histidine kinase [Rhodopseudomonas palustris BisB5] gb|ABE38734.1| Hpt sensor hybrid histidine kinase [Rhodopseudomonas palustris BisB5] Length = 880 Score = 365 bits (936), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 240/758 (31%), Positives = 395/758 (52%), Gaps = 75/758 (9%) Query: 14 RMRISALTVGALLLILLTVTVIVSGTLLYRASLNDWRNDLSTLSTVLAENTAQTMSSARL 73 R +I+ + A L++ + T ++ + L ++L +L + LAE ++ S L Sbjct: 14 RSQIALRLISAALIVSIVSTNLIFLSDLRESTLRTTEANLKRYNLTLAEEADRSFKSLDL 73 Query: 74 VIDSIQADIEQANPADQQQLQRHVGSVEFSQIMREKIRGLPFISGIGVANAEGRILALSR 133 V+ S+ + + D QR + E +++EK+ GLP I + + +A+G+++ SR Sbjct: 74 VLSSVSDYLARRGVTDSDSYQRTMSDQETHALLKEKVTGLPQIDAVTMIDAKGKLINFSR 133 Query: 134 VYPAPPIDLTDRDYYLYHRNSDSTADFVGETVLSRAGGVPTFYVSRRVNDRQGRLLAIIV 193 +P P I+++DRDY+ + ++ ++ +R G Y++RR+ND G + +++ Sbjct: 134 YWPIPDINVSDRDYFKALSSDENLETYISAPTQNRGNGTWNIYLARRLNDPDGNFMGLLL 193 Query: 194 IGLPCAFFETFFDNVTRDKPFSIVLARKDGKTLTS------TDLLPEQGQRRSITPLAQL 247 + +FE FF + I L R D L S T L G RR++ L Sbjct: 194 GAMSQRYFENFFAATAPESDTKISLVRSDDLVLASYPHSAKTGQLKADGGRRALQAGGSL 253 Query: 248 HPSMPADDEGRQSHVFMQSHWLGIHRPVRNWPMYLEIGVTDEVYFGEWMESMYPLMLVAA 307 + +++G +SH + L R + N+P+ + + + +E W L+ ++ Sbjct: 254 RET---NEDGHKSHKTI----LRSARMLPNYPVLVTVTLNEESELRNWHGMAKLLLAMSI 306 Query: 308 ISLVGLIGGFVLTWRQVRRREEDALLATRLKEEADHANEAKSHFLAMVSHEIRTPMNGIL 367 IS + ++ G V R ++ AL A + + +KS+FLAM+SHEIRTPMN +L Sbjct: 307 ISGLIILTGSVAIARWWNKQ---ALYAEAAEATS----ASKSNFLAMMSHEIRTPMNAVL 359 Query: 368 GLSELLMESGLSSKQRDYADSIHGATGGLVRIINDILDFSKIESGKLDLEMVAFHPVRLV 427 GL+ L+E+ L+ +QR + IH + GL++I++DIL++S++E+G+L +E++ F P+ +V Sbjct: 360 GLASNLLETKLAPEQRRAVEGIHSSGDGLLKILDDILEYSRLEAGRLSIELITFSPINVV 419 Query: 428 QELSDLYRPSLQRK--DVQFDLHLDCPENLSVVGDPARLKQVLGNLLSNAIKFTQAGHVQ 485 ++ D+ P K ++ DL + P+ L +GDP R++QVL NLLSNA+KFT +G + Sbjct: 420 KQSLDMIGPRAAAKGLTIRTDLSDNLPQAL--IGDPGRIRQVLLNLLSNAVKFTPSGTIV 477 Query: 486 LSMSARQDESGPSRWRLFFAITDTGIGISPEALQQLFRPFAQADSSISRRFGGTGLGLAI 545 ++++ D+ S R+ + +TDTGIGI P+ ++ LF F QAD+SI RRFGG+GLGLAI Sbjct: 478 VAVNCVSDDR--STARIQWTVTDTGIGIDPDKIESLFDDFVQADNSIRRRFGGSGLGLAI 535 Query: 546 SKNLVELMGGTIACQSIPGESTRFSFELGCAEASTPAPEPVSEAAAPAPATALATTAPAL 605 S+ L+E MGG+I S PG + F+F L A S AP+ S Sbjct: 536 SRRLIEQMGGSINVTSTPGVGSSFNFTLALAITSDVAPKEES------------------ 577 Query: 606 PPAAEAPGTLMPPDNAPQPPSNVDASATVLPSLLAGA---RILMAEDTEINRQLLRILLA 662 P D A + AG R+L+ +D NR + +L+ Sbjct: 578 ------------------PTGVTDLHARI----AAGGRPLRLLIVDDNPTNRAVAVQMLS 615 Query: 663 RKGCILQEVENGLQAVEAIRTGHYDLVLMDCMMPIMDGYQATAEIRAHEAARGLP--RTP 720 +G +AV A YD++LMD MP MDG +AT IR ARG P P Sbjct: 616 EFAIQCSTACDGTEAVTAATRFEYDVILMDMRMPEMDGLEATRSIR----ARGGPLATVP 671 Query: 721 IIALTASAIEGDRQRCLDAGMDDYLSKPFTQVGLMQTV 758 IIA TA+A D Q C DAGM+D+++KP + L+ + Sbjct: 672 IIAFTANAFAEDEQACRDAGMNDHVAKPVRKNALVSAI 709 >ref|YP_533651.1| multi-sensor hybrid histidine kinase [Rhodopseudomonas palustris BisB18] gb|ABD89332.1| Hpt sensor hybrid histidine kinase [Rhodopseudomonas palustris BisB18] Length = 864 Score = 345 bits (885), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 245/764 (32%), Positives = 384/764 (50%), Gaps = 60/764 (7%) Query: 9 QRKTPRMRISALTV-GALLLILLTVTVIVSGTLLY------RASLNDWRNDLSTLSTVLA 61 R P M+ S+ + G L L ++ + GT L+ ++L +L+ S LA Sbjct: 3 HRVDPAMKPSSKRLLGVLFLTSFSLIAAIVGTNLFVMNNLRESTLRTAEINLARYSLTLA 62 Query: 62 ENTAQTMSSARLVIDSIQADIEQANPADQQQLQRHVGSVEFSQIMREKIRGLPFISGIGV 121 E ++ S LV+ S+ + + D Q+ + E ++REKI GLP + + + Sbjct: 63 EEADRSFKSLDLVLSSVGDYLGRRGVTDSASYQQTMSDQETHLMLREKITGLPQVDAVTM 122 Query: 122 ANAEGRILALSRVYPAPPIDLTDRDYYLYHRNSDSTADFVGETVLSRAGGVPTFYVSRRV 181 N G+++ SR +P P +D++DRDY+ + + F+ V +R G Y++RR+ Sbjct: 123 INERGKLINFSRYWPIPDVDISDRDYFRALQADANLETFISAPVQNRGTGTWNIYIARRL 182 Query: 182 NDRQGRLLAIIVIGLPCAFFETFFDNVTRDKPFSIVLARKDGKTLTSTDLLPEQGQRRSI 241 ND G + +++ + +FE FF + ++ L R DG L P + I Sbjct: 183 NDPNGAFMGLLLGAMSLQYFENFFGATSPGVGTAVSLVRDDGLLLAR---YPASDRIGKI 239 Query: 242 TPLAQLHPSMPADDEGRQSHVFMQSHWLGIHRPVRNWPMYLEIGVTDEVYFGEWMESMYP 301 + A ++ A R++ Q L R + N+P+ + + T+ W Sbjct: 240 SSGAG-QRALAAGGSLREAGDTDQQMRLHAARMLPNYPVLIAVSQTEVSALQSWRSIAAL 298 Query: 302 LMLVAAISLVGLIGGFVLTWRQVRRREEDALLATRLKEEADHANEAKSHFLAMVSHEIRT 361 ++ +++++ + L+ V+ R R+++ L +A AN AKS F+AM+SHEIRT Sbjct: 299 IVAMSSLTAIVLLIVTVVIARWWIRQDQ-------LISDAQSANAAKSTFVAMMSHEIRT 351 Query: 362 PMNGILGLSELLMESGLSSKQRDYADSIHGATGGLVRIINDILDFSKIESGKLDLEMVAF 421 PMN +LGL+ L++S L ++QR IH A L+ I+NDILDFSK+E+G+L LE +AF Sbjct: 352 PMNAVLGLATNLLDSRLDAEQRRSVVGIHDAGDALLDILNDILDFSKLEAGRLSLESIAF 411 Query: 422 HPVRLVQELSDLYRPSLQRKDVQFDLHLDCPENLSVVGDPARLKQVLGNLLSNAIKFTQA 481 P LV+ + P + ++ +D +++ GD R++QVL NL+SNA+KFT + Sbjct: 412 SPEALVESALSIVLPRATARGLRVRNQIDPSLPIALQGDAGRIRQVLLNLMSNAVKFTPS 471 Query: 482 GHVQLSMSAR-QDESGPSRWRLFFAITDTGIGISPEALQQLFRPFAQADSSISRRFGGTG 540 G V ++ R DES + L + I DTGIGI+ + + LF FAQADSSISRRFGG+G Sbjct: 472 GEVVVTTKCRWADESFAA---LEWIIADTGIGIAEQDIGSLFTDFAQADSSISRRFGGSG 528 Query: 541 LGLAISKNLVELMGGTIACQSIPGESTRFSFELGCAEASTPAPEPVSEAAAPAPATALAT 600 LGLAI K LVE MGG I S G+ T F F L Sbjct: 529 LGLAICKRLVEQMGGEIQVSSAYGKGTTFRFSL--------------------------- 561 Query: 601 TAPALPPAAEAPGTLMPPDNAPQPPSNVDASATVLPSLLAGARILMAEDTEINRQLLRIL 660 LP A++ P +P + P S+ L L RIL+ +D NR + + Sbjct: 562 ---TLPLASQLP---VPDTDDPVVYSDFRQRIAALGRPL---RILIVDDNPTNRLVAAKM 612 Query: 661 LARKGCILQEVENGLQAVEAIRTGHYDLVLMDCMMPIMDGYQATAEIRAHEAARGLPRTP 720 L +G +AV A YD++LMD MP MDG +AT IRA + + + P Sbjct: 613 LQDFPTQTNTASDGNEAVTAATRFSYDVILMDVRMPEMDGLEATRAIRACDGS--MQGAP 670 Query: 721 IIALTASAIEGDRQRCLDAGMDDYLSKPFTQVGLMQTVEKWLQK 764 IIA TA+A D C +AGM+D++SKP + L++ + + L + Sbjct: 671 IIAFTANAFAEDAIACREAGMNDFVSKPVRKKALIEAILRVLPR 714 >ref|YP_003796498.1| putative hybrid histidine kinase [Candidatus Nitrospira defluvii] emb|CBK40572.1| putative Hybrid histidine kinase [Candidatus Nitrospira defluvii] Length = 1210 Score = 339 bits (870), Expect = 9e-91, Method: Compositional matrix adjust. Identities = 193/413 (46%), Positives = 257/413 (62%), Gaps = 20/413 (4%) Query: 351 FLAMVSHEIRTPMNGILGLSELLMESGLSSKQRDYADSIHGATGGLVRIINDILDFSKIE 410 FLA +SHEIRTPMNG+LG +ELL+ S L+ KQR A ++H + L+ IINDILDFSKIE Sbjct: 660 FLANMSHEIRTPMNGVLGTTELLLNSALTDKQRHLASTVHRSGRTLLAIINDILDFSKIE 719 Query: 411 SGKLDLEMVAFHPVRLVQELSDLYRPSLQRKDVQFDLHLDCPENLSVVGDPARLKQVLGN 470 +GKLDLE V F + +++E +L+ + +RK ++ H+ + GDP R +Q+L N Sbjct: 720 AGKLDLECVDFDLLPVLEESLELFGEAARRKQLRLSQHIADAVPRYLKGDPVRFRQILMN 779 Query: 471 LLSNAIKFTQAGHVQLSMSARQDESGPSRWRLFFAITDTGIGISPEALQQLFRPFAQADS 530 LLSNA+KFT+ G V S+SA E ++ L FA+TDTGIGI P A ++F F+QAD Sbjct: 780 LLSNAMKFTETGGV--SLSAEYVEGTTTQALLRFAVTDTGIGIPPAAKSRIFDAFSQADG 837 Query: 531 SISRRFGGTGLGLAISKNLVELMGGTIACQSIPGESTRFSFELGCAEASTPAPEPVSEAA 590 S +RR+GGTGLGL+I+K LV LMGGTI +S PG + F+F + +P+ Sbjct: 838 STTRRYGGTGLGLSIAKQLVGLMGGTITVESTPGSGSTFAF------TTRFDLQPL---- 887 Query: 591 APAPATALATTAPALPPAAEAPGTLMPPDNAPQPPS-NVDASATVLPSLLAGARILMAED 649 + L+T L P + L+ P PS V + S RIL+AED Sbjct: 888 ----GSGLST---KLAPYTQWADPLVSPGQTSDIPSPQVTEAGAAASSPKQSGRILLAED 940 Query: 650 TEINRQLLRILLARKGCILQEVENGLQAVEAIRTGHYDLVLMDCMMPIMDGYQATAEIRA 709 + +NR++ +L + G ++ ENG QA+ A H+D+VLMDC MP MDG AT EIR Sbjct: 941 SPVNREVAVGMLEQLGYEVEVAENGRQALAAAERDHFDIVLMDCQMPEMDGLTATGEIRR 1000 Query: 710 HEAARGLPRTPIIALTASAIEGDRQRCLDAGMDDYLSKPFTQVGLMQTVEKWL 762 E A G R PIIALTA A++GDR+ CL AGMDDYLSKPFTQ+ L V KWL Sbjct: 1001 RETASGRRRLPIIALTAHAMQGDREHCLTAGMDDYLSKPFTQMQLQGIVRKWL 1053 >ref|YP_001208811.1| sensor histidine kinase [Bradyrhizobium sp. ORS 278] emb|CAL80596.1| putative sensor histidine kinase with a response regulator receiver domain and a phosphotransferase (HPt) domain [Bradyrhizobium sp. ORS 278] Length = 850 Score = 334 bits (857), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 240/751 (31%), Positives = 374/751 (49%), Gaps = 76/751 (10%) Query: 27 LILLTVTVIVSGTLLYRASLND-----WRNDLSTLSTVLAENTAQTMSSARLVIDSIQAD 81 + L+ + VI L + +L + DLS S LAEN +++ S LV+ +++ Sbjct: 14 IALILICVIAGSNLFFLTNLRENALQHAEEDLSRHSLTLAENADRSVKSVDLVLTTVRDY 73 Query: 82 IEQANPADQQQLQRHVGSVEFSQIMREKIRGLPFISGIGVANAEGRILALSRVYPAPPID 141 + + D ++ + +++EKI GLP I + + +A G++L SR +P P ++ Sbjct: 74 LARGGAIDGDGYRKIASDYQTHLLLKEKIAGLPQIDAVTLIDARGKLLNFSRFWPIPDVN 133 Query: 142 LTDRDYYLYHRNSDSTADFVGETVLSRAGGVPTFYVSRRVNDRQGRLLAIIVIGLPCAFF 201 ++DRDY+ + + + V +R G Y +RR+ND +G + +++ + + Sbjct: 134 VSDRDYFKALKADPAMQTVLSTPVQNRGDGTWNIYFARRLNDAKGEFMGLMLGAMSVPYL 193 Query: 202 ETFFDNVTRDKPFSIVLARKDGKTLTSTDLLPEQGQ------RRSITPLAQLHPSMPADD 255 E FF + + ++ L R+DG L E G+ +R+++ L Sbjct: 194 ENFFGSTSLGLEAAVSLIREDGTLLAHFPPTSEIGKPTSGFGQRALSAGGVLREPSARSG 253 Query: 256 EGRQSHVFMQSHWLGIHRPVRNWPMYLEIGVTDEVYFGEWMESMYPLMLVAAISLVGLIG 315 E R L + + N+P + + V ++ W L++V+ +S + ++ Sbjct: 254 EMR----------LRAAKMLPNYPAMIVVSVPEQHVLTAWRGMATLLVIVSMVSALAVVA 303 Query: 316 GFVLTWRQVRRREEDALLATRLKEEADHANEAKSHFLAMVSHEIRTPMNGILGLSELLME 375 VL R +R E L E A+ AN AKS F+AM+SHEIRTPMN +LGL+ L+E Sbjct: 304 AAVLISRWWQRHEH-------LIEAAEAANAAKSTFVAMMSHEIRTPMNAVLGLATTLLE 356 Query: 376 SGLSSKQRDYADSIHGATGGLVRIINDILDFSKIESGKLDLEMVAFHPVRLVQELSDLYR 435 + L +QR +IH A L+ I+NDILDFSK+ESG+L LE +AF LV + Sbjct: 357 TNLDPEQRRSVVAIHNAGDNLLEILNDILDFSKLESGQLSLEDIAFSAEALVHNTLSIIG 416 Query: 436 PSLQRKDVQFDLHLDCPENLSVVGDPARLKQVLGNLLSNAIKFTQAGHVQLSMSARQDES 495 P KD++ D ++VGD R++Q+L NL+SNA+KFT AG V + + R E Sbjct: 417 PRASAKDLKLRNVSDPAVPPALVGDAGRIRQILLNLVSNAVKFTSAGEVVI--TTRCIEK 474 Query: 496 GPSRWRLFFAITDTGIGISPEALQQLFRPFAQADSSISRRFGGTGLGLAISKNLVELMGG 555 ++ + + +TDTGIGI+ + + LF F QAD+SISRRFGG+GLGLAI K L E MGG Sbjct: 475 DQAKATVEWTVTDTGIGIAADKIGSLFANFVQADNSISRRFGGSGLGLAICKRLTEQMGG 534 Query: 556 TIACQSIPGESTRFSFELGCAEASTPAPEPVSEAAAPAPATALATTAPALPPAAEAPGTL 615 I S G+ + FSF L P++EA A Sbjct: 535 EINVTSTLGKGSTFSFRLTL---------PIAEAVA------------------------ 561 Query: 616 MPPDNAPQPPSNVDASATVLPSLLAG----ARILMAEDTEINRQLLRILLARKGCILQEV 671 P N D+ +L S +A R+L+ +D NR + +L Sbjct: 562 -------VPEQNDDSIYAMLQSRIAAFGRPLRVLVVDDNPTNRLVATKMLKDFDIQTDTA 614 Query: 672 ENGLQAVEAIRTGHYDLVLMDCMMPIMDGYQATAEIRAHEAARGLPRTPIIALTASAIEG 731 +G +AV A +YDL+LMD MP MDG+QAT IRA R PIIA TA+A Sbjct: 615 CDGAEAVTAASRFNYDLILMDVRMPEMDGFQATRTIRARGERRS--NVPIIAFTANAFME 672 Query: 732 DRQRCLDAGMDDYLSKPFTQVGLMQTVEKWL 762 D + C +AGM+D++ KP + L++ + + L Sbjct: 673 DIRACREAGMNDFVVKPARKKALVEAILRVL 703 >ref|YP_001236704.1| multi-sensor hybrid histidine kinase [Bradyrhizobium sp. BTAi1] gb|ABQ32798.1| multi-sensor hybrid histidine kinase [Bradyrhizobium sp. BTAi1] Length = 850 Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 235/718 (32%), Positives = 358/718 (49%), Gaps = 65/718 (9%) Query: 52 DLSTLSTVLAENTAQTMSSARLVIDSIQADIEQANPADQQQLQRHVGSVEFSQIMREKIR 111 DLS S LAEN +++ S LV+ S++ + + D + + +++EKI Sbjct: 44 DLSRHSLTLAENADRSVKSVDLVLSSVRDYLVRGGAIDAATYGKVAADYQTHLLLKEKIA 103 Query: 112 GLPFISGIGVANAEGRILALSRVYPAPPIDLTDRDYYLYHRNSDSTADFVGETVLSRAGG 171 GLP I + + +A+GR+L SR +P P ++++DRDY+ + + +V V +R G Sbjct: 104 GLPQIDAVTLIDAQGRLLNFSRYWPIPDVNISDRDYFKALKGDSALRSYVSTPVQNRGDG 163 Query: 172 VPTFYVSRRVNDRQGRLLAIIVIGLPCAFFETFFDNVTRDKPFSIVLARKDGKTLTSTDL 231 Y +RR++D +G + +++ + + E FF + S+ L R+DG L Sbjct: 164 TWNIYFARRLDDGKGEFMGLLLGAMSVPYLENFFGSTALGLDASVSLIREDGILLAHFPP 223 Query: 232 LPEQGQRRS-ITPLAQLHPSMPADDEGRQSHVFMQSHWLGIHRPVRNWPMYLEIGVTDEV 290 E G+ S A + + GR + +++ + + ++P + + V ++ Sbjct: 224 TSEIGKSTSGFGQRALAAGGVLRELSGRTGEMRLRAAKM-----LPSYPAMIVVSVPEQH 278 Query: 291 YFGEWMESMYPLMLVAAISLVGLIGGFVLTWRQVRRREEDALLATRLKEEADHANEAKSH 350 W L++++ +S ++ VL R R E L + A+ AN AKS Sbjct: 279 VLKAWRAMATLLVIMSLVSATAVLAAAVLISRLWERHEH-------LIDAAEAANAAKST 331 Query: 351 FLAMVSHEIRTPMNGILGLSELLMESGLSSKQRDYADSIHGATGGLVRIINDILDFSKIE 410 F+AM+SHEIRTPMN +LGL+ L+E+ L +QR +IH A L+ I+NDILDFSK+E Sbjct: 332 FVAMMSHEIRTPMNAVLGLATTLLETNLDPEQRRSVVAIHNAGDNLLEILNDILDFSKLE 391 Query: 411 SGKLDLEMVAFHPVRLVQELSDLYRPSLQRKDVQFDLHLDCPENLSVVGDPARLKQVLGN 470 SG+L LE +AF LV + P KD++ D ++VGD R++Q+L N Sbjct: 392 SGQLSLEDIAFSAEALVHNTLSIIGPRASAKDLKLRSVNDPAVPPALVGDAGRIRQILLN 451 Query: 471 LLSNAIKFTQAGHVQLSMS--ARQDESGPSRWRLFFAITDTGIGISPEALQQLFRPFAQA 528 L+SNA+KFT AG V ++ A+ D W +TDTGIGI+ + + LF F QA Sbjct: 452 LVSNAVKFTAAGEVVITTRCLAKDDAKATVEW----TVTDTGIGIAADKIGSLFANFVQA 507 Query: 529 DSSISRRFGGTGLGLAISKNLVELMGGTIACQSIPGESTRFSFELGCAEASTPAPEPVSE 588 D+SISRRFGG+GLGLAI K L E MGG I S G + FSF L P++E Sbjct: 508 DNSISRRFGGSGLGLAICKRLTEQMGGEIDVTSTLGRGSTFSFRLTL---------PIAE 558 Query: 589 AAAPAPATALATTAPALPPAAEAPGTLMPPDNAPQPPSNVDASATVLPSLLAGA----RI 644 A A P N D+ L S +A R+ Sbjct: 559 AVA-------------------------------VPEQNDDSIYAALQSRIAAYGRPLRV 587 Query: 645 LMAEDTEINRQLLRILLARKGCILQEVENGLQAVEAIRTGHYDLVLMDCMMPIMDGYQAT 704 L+ +D NR + +L +G +AV A +YDL+LMD MP MDG+QAT Sbjct: 588 LVVDDNPTNRLVATKMLKDFDIQTDTACDGAEAVTAASRFNYDLILMDVRMPEMDGFQAT 647 Query: 705 AEIRAHEAARGLPRTPIIALTASAIEGDRQRCLDAGMDDYLSKPFTQVGLMQTVEKWL 762 IRA R PIIA TA+A D + C +AGM+D++ KP + L++ + + L Sbjct: 648 RTIRARGERRS--NVPIIAFTANAFMEDIRACREAGMNDFVVKPARKKALVEAILRVL 703 >ref|YP_423098.1| Signal transduction histidine kinase [Magnetospirillum magneticum AMB-1] dbj|BAE52539.1| Signal transduction histidine kinase [Magnetospirillum magneticum AMB-1] Length = 992 Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 232/709 (32%), Positives = 351/709 (49%), Gaps = 81/709 (11%) Query: 20 LTVGALLLILLTVTVIVSGTLLYRASLNDWRNDLSTLSTVLAENTAQTMSSARLVIDSIQ 79 L VG + + LL V+ + + S+ +WR++LS LS +LAE+ QT+++A LV SI Sbjct: 27 LVVGGVFIALLLAVTAVTVYVQRQQSIGEWRSNLSNLSRLLAEHARQTINAADLVQKSIG 86 Query: 80 ADIEQANPADQQQLQRHVGSVEFSQIMREKIRGLPFISGIGVANAEGRILALSRVYPAPP 139 + + + L+R +GS + +R+K+ G+P I V G ++ +R YP PP Sbjct: 87 DRVVELGIETEDDLRRMLGSRATFEALRDKVSGVPQIDVATVVATNGDVVNFTRSYPPPP 146 Query: 140 IDLTDRDYYLYHRNSDSTADFVGETVLSRAGGVPTFYVSRRVNDRQGRLLAIIVIGLPCA 199 I+L DRDY+ H F+ +R G TFY++R++ + G + +++ G+ A Sbjct: 147 INLADRDYFKAHFADPDLKFFLSLPAKNRGTGRWTFYLTRKIRNSHGATIGLVLTGIESA 206 Query: 200 FFETFFDNVTRDKPFSIVLARKDGKTLTST--------DLLPE---QGQRRSITPLAQLH 248 F ++ V + +I L R DG L +LP+ Q R + Sbjct: 207 FLSEYYKAVNFSEFSAISLYRDDGGLLARMPERDDSMGKVLPQPGIQALRDGVETFITSE 266 Query: 249 PSMPADDEGRQSHVFMQSHWLGIHRPVRNWPMYLEIGVTDEVYFGEWMESMYPLMLVAAI 308 P + D R+ + R V +P+ + + T+E+ +W LML A Sbjct: 267 PRL-VDQSDRRFRIVAP-------RAVAGYPLAVIVAATEELVLADWRRKA--LMLGAGS 316 Query: 309 SLVGLIGGFVLTW--RQVRRREEDALLATRLKEEADHANEAKSHFLAMVSHEIRTPMNGI 366 + L+ ++ W R + RE A + ++ A+ AN+AK+ FLA +SHEIRTPMNG+ Sbjct: 317 GGLSLLLLGLMVWIARLLDNRETAMATARQAQQVAERANQAKAAFLATMSHEIRTPMNGV 376 Query: 367 LGLSELLMESGLSSKQRDYADSIHGATGGLVRIINDILDFSKIESGKLDLEMVAFHPVRL 426 +G++ LL+++ L +QR +A +I + L+ +INDILDFSK+E+GKLDLE F V L Sbjct: 377 IGMTGLLLDTQLDPEQRHFATTIRDSAESLLTVINDILDFSKLEAGKLDLESTDFELVGL 436 Query: 427 VQELSDLYRPSLQRKDVQFDLHLDCPENLSVVGDPARLKQVLGNLLSNAIKFTQAGHVQL 486 V+ + D+ P K ++ +D V GDP RL+Q+L NL NAIKFT H + Sbjct: 437 VESIVDILAPRAHAKGIEIASMVDPDLPAWVRGDPGRLRQILMNLAGNAIKFTS--HGGI 494 Query: 487 SMSARQDESGPSRWRLFFAITDTGIGISPEALQQLFRPFAQADSSISRRFGGTGLGLAIS 546 S+ R + S RL F + DTGIGI +A+ +LF F Q D+S +RR+GGTGLGLAIS Sbjct: 495 SIEVRDETSPDGAGRLRFDVRDTGIGIPQDAIGRLFSMFMQVDASTARRYGGTGLGLAIS 554 Query: 547 KNLVELMGGTIACQSIPGESTRFSFELGCAEASTPAPEPVSEAAAPAPATALATTAPALP 606 K L E+MGGTI +S PG + F F L P + TAP Sbjct: 555 KRLTEMMGGTIGVESTPGAGSLFWFSL-----------PFQ----------MVETAP--- 590 Query: 607 PAAEAPGTLMPPDNAPQPPSNVDASATVLPSLLAGARILMAEDTEINRQLLRILLARKGC 666 PQ P LAG RIL+ +D+ INR +L L G Sbjct: 591 ---------------PQRPD------------LAGRRILVVDDSPINRDVLERQLRGFGV 623 Query: 667 ILQEVENGLQAV----EAIRTGH-YDLVLMDCMMPIMDGYQATAEIRAH 710 I+ + A+ A TG ++ ++D MP + G IRA Sbjct: 624 IVASCADAESALAELGRAAATGTPWEAAIIDARMPGVTGSDLIGRIRAE 672 Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 59/119 (49%), Positives = 80/119 (67%), Gaps = 2/119 (1%) Query: 643 RILMAEDTEINRQLLRILLARKGCILQEVENGLQAVEAIRTGHYDLVLMDCMMPIMDGYQ 702 RIL+AED +N+Q+ LL + G + +G +AVEA+R+ YDLVLMD MP MDG Q Sbjct: 745 RILVAEDNPVNQQVAVGLLRKLGHSVDVAADGAEAVEAVRSRPYDLVLMDVQMPEMDGLQ 804 Query: 703 ATAEIRAHEAARGLPRTPIIALTASAIEGDRQRCLDAGMDDYLSKPFTQVGLMQTVEKW 761 ATA IRA G R PI+A+TA+A+ GD + CLDAGMD Y+SKP + LM+ + ++ Sbjct: 805 ATAAIRALTG--GAERVPIVAMTANAMRGDDRMCLDAGMDRYISKPIDRRKLMEVLAQY 861 >ref|YP_487456.1| multi-sensor hybrid histidine kinase [Rhodopseudomonas palustris HaA2] gb|ABD08545.1| Hpt sensor hybrid histidine kinase [Rhodopseudomonas palustris HaA2] Length = 879 Score = 328 bits (841), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 231/748 (30%), Positives = 374/748 (50%), Gaps = 62/748 (8%) Query: 20 LTVGALLLILLTVTVIVSGTLLYRASLNDWRNDLSTLSTVLAENTAQTMSSARLVIDSIQ 79 LT AL+L + +I G L +L +L + L+E ++ S LV+ S+ Sbjct: 20 LTAVALILSIFGTNLIFLGNL-RETTLQTAEANLQRYNLTLSEEADRSFKSLDLVLSSVS 78 Query: 80 ADIEQANPADQQQLQRHVGSVEFSQIMREKIRGLPFISGIGVANAEGRILALSRVYPAPP 139 + + D +R V + +++EKI GLP I + + + +G+++ SR +P P Sbjct: 79 DYLARREVTDGHSYKRTVSGQDTHILLKEKITGLPQIDAVSLIDDQGKLINFSRYWPIPD 138 Query: 140 IDLTDRDYYLYHRNSDSTADFVGETVLSRAGGVPTFYVSRRVNDRQGRLLAIIVIGLPCA 199 +D++DRDY+ + + F+ V +R G T Y++RR++D G+ + +++ + Sbjct: 139 VDVSDRDYFKALSSDTNLETFISAPVRNRGNGTWTIYLARRLDDPNGKFMGMLLGAMSQR 198 Query: 200 FFETFFDNVTRDKPFSIVLARKDGKTLTSTDLLPEQGQRRSITPLAQLHPSMPADDEGRQ 259 + E FF I L R D L + G+ +S + ++ A + R+ Sbjct: 199 YVENFFAATAPGPDTEIALVRDDDLLLAAYPHSEAIGRLKS----SGGRSALEAGGKLRE 254 Query: 260 SHVFMQSHWLGIHRPVRNWPMYLEIGVTDEVYFGEWMESMYPLMLVAAISLVGLIGGFVL 319 + + + R + N+P+ + + ++ W E L+ ++ +S + ++ G + Sbjct: 255 AGSGIGKPLIRSARMLPNYPVLVTVAQHEDGLLRSWQEMATLLIAMSVVSALIILTGSIA 314 Query: 320 TWRQVRRREEDALLATRLKEEADHANEAKSHFLAMVSHEIRTPMNGILGLSELLMESGLS 379 R ++ E A+ A+ AKS F+AM+SHEIRTPMN +LGL+ L+E+ L Sbjct: 315 IARWWNKQ-------AVYTEAAEAASAAKSSFVAMMSHEIRTPMNAVLGLANNLLETRLD 367 Query: 380 SKQRDYADSIHGATGGLVRIINDILDFSKIESGKLDLEMVAFHPVRLVQELSDLYRPSLQ 439 + QR IH A L+ I++DILDFSK+E+G+L LE++ F P +V+ + P Sbjct: 368 ADQRRAVVGIHDAGDNLLEILDDILDFSKLEAGRLSLELIPFSPHNIVEHSLSMIGPRAI 427 Query: 440 RKDVQF--DLHLDCPENLSVVGDPARLKQVLGNLLSNAIKFTQAGHVQLSMSARQDESGP 497 K + D+ D P L +GDP R++QVL NLLSNA+KFT +G + +++ ++ Sbjct: 428 AKGLAIGTDISDDLPRAL--IGDPGRIRQVLLNLLSNAVKFTSSGKIVVALECLSNDG-- 483 Query: 498 SRWRLFFAITDTGIGISPEALQQLFRPFAQADSSISRRFGGTGLGLAISKNLVELMGGTI 557 S R+ + ++DTGIGI P+ ++ LF F QAD+SI RRFGG+GLGLAIS+ L+E MGG I Sbjct: 484 SAARIQWTVSDTGIGIDPDKIESLFSDFVQADNSIRRRFGGSGLGLAISRRLIEQMGGRI 543 Query: 558 ACQSIPGESTRFSFELGCAEASTPAPEPVSEAAAPAPATALATTAPALPPAAEAPGTLMP 617 S PG+ + F F L PV+ T +P Sbjct: 544 NVTSTPGQGSAFRFTLTL---------PVT--------------------------TDVP 568 Query: 618 PDNAPQPPSNVDASATVLPSLLAGA---RILMAEDTEINRQLLRILLARKGCILQEVENG 674 P VD A + AG R+L+ +D NR + +L+ +G Sbjct: 569 PKEEDHQLRYVDLKARI----AAGGRPLRLLIVDDNPTNRAVAGQMLSEFAIQCDTACDG 624 Query: 675 LQAVEAIRTGHYDLVLMDCMMPIMDGYQATAEIRAHEAARGLPRTPIIALTASAIEGDRQ 734 +AV A YD +LMD MP MDG +AT IRA A L PIIA TA+A D + Sbjct: 625 AEAVTAATRFSYDAILMDMRMPEMDGLEATRAIRAKGGA--LATVPIIAFTANAFAEDEK 682 Query: 735 RCLDAGMDDYLSKPFTQVGLMQTVEKWL 762 C +AGM+D+++KP + L+ + + L Sbjct: 683 ACREAGMNDHIAKPVRKNVLVGAILRAL 710