BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0036.0047.p (490 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777138.1| RecA-superfamily ATPase [Herbaspirillum sero... 995 0.0 ref|XP_002535762.1| Circadian clock protein kinase kaiC, putativ... 589 e-166 ref|YP_002909431.1| Non-specific serine/threonine protein kinase... 412 e-113 ref|YP_004350403.1| Rad553 [Burkholderia gladioli BSR3] >gi|3273... 411 e-112 ref|ZP_06845506.1| Non-specific serine/threonine protein kinase ... 390 e-106 ref|YP_004231028.1| putative circadian clock protein, KaiC [Burk... 390 e-106 ref|YP_003608216.1| non-specific serine/threonine protein kinase... 390 e-106 ref|YP_554813.1| hypothetical protein Bxe_B0484 [Burkholderia xe... 389 e-106 ref|YP_003910132.1| Non-specific serine/threonine protein kinase... 389 e-106 ref|YP_001887773.1| Non-specific serine/threonine protein kinase... 385 e-105 >ref|YP_003777138.1| RecA-superfamily ATPase [Herbaspirillum seropedicae SmR1] gb|ADJ65230.1| RecA-superfamily ATPase protein [Herbaspirillum seropedicae SmR1] Length = 490 Score = 995 bits (2572), Expect = 0.0, Method: Compositional matrix adjust. Identities = 490/490 (100%), Positives = 490/490 (100%) Query: 1 MNEQPQSLPPAPTGGRPSRISLLSTGIAGFDEILGGGLPAGSLYLIQGLAGSGKTTLASQ 60 MNEQPQSLPPAPTGGRPSRISLLSTGIAGFDEILGGGLPAGSLYLIQGLAGSGKTTLASQ Sbjct: 1 MNEQPQSLPPAPTGGRPSRISLLSTGIAGFDEILGGGLPAGSLYLIQGLAGSGKTTLASQ 60 Query: 61 IGWAQARGGNQVMLLTLIAESHAKMLNHVSNFDFFDESLVGDRMQMLSGYAALASEGLRG 120 IGWAQARGGNQVMLLTLIAESHAKMLNHVSNFDFFDESLVGDRMQMLSGYAALASEGLRG Sbjct: 61 IGWAQARGGNQVMLLTLIAESHAKMLNHVSNFDFFDESLVGDRMQMLSGYAALASEGLRG 120 Query: 121 LLRMISAELSRHRPAMLIIDGFRSVRDSGPSDLNLSEFMHSLNALVFTMNCTTLLLSPVE 180 LLRMISAELSRHRPAMLIIDGFRSVRDSGPSDLNLSEFMHSLNALVFTMNCTTLLLSPVE Sbjct: 121 LLRMISAELSRHRPAMLIIDGFRSVRDSGPSDLNLSEFMHSLNALVFTMNCTTLLLSPVE 180 Query: 181 GNLPESENTLVDGVIELSQYESGMQLVREIKVFKLRGANHLLGKHVFEINQSGVEIFPRF 240 GNLPESENTLVDGVIELSQYESGMQLVREIKVFKLRGANHLLGKHVFEINQSGVEIFPRF Sbjct: 181 GNLPESENTLVDGVIELSQYESGMQLVREIKVFKLRGANHLLGKHVFEINQSGVEIFPRF 240 Query: 241 EATATRAGKVPGTSDRYVSVGIPSWDKCIGGGVVSGSLTCLLGSPGVGKTLMGLHFIEQG 300 EATATRAGKVPGTSDRYVSVGIPSWDKCIGGGVVSGSLTCLLGSPGVGKTLMGLHFIEQG Sbjct: 241 EATATRAGKVPGTSDRYVSVGIPSWDKCIGGGVVSGSLTCLLGSPGVGKTLMGLHFIEQG 300 Query: 301 LKDGQQCLILGFYESPERLLAKARKAGMQLDAHIDSGALQVMWQLPLEMLCDDLAKRMLD 360 LKDGQQCLILGFYESPERLLAKARKAGMQLDAHIDSGALQVMWQLPLEMLCDDLAKRMLD Sbjct: 301 LKDGQQCLILGFYESPERLLAKARKAGMQLDAHIDSGALQVMWQLPLEMLCDDLAKRMLD 360 Query: 361 DIARRGVTRLLIDGVDGLRSIVVQPQRMRPFLVALTNELRARGVTTFITEQLPYFRESRP 420 DIARRGVTRLLIDGVDGLRSIVVQPQRMRPFLVALTNELRARGVTTFITEQLPYFRESRP Sbjct: 361 DIARRGVTRLLIDGVDGLRSIVVQPQRMRPFLVALTNELRARGVTTFITEQLPYFRESRP 420 Query: 421 QVDPSSSQLYENMMLLEYVVKDDVNRRQIAVMKLRENGYDGAARLMNISDAGIEIDGLVS 480 QVDPSSSQLYENMMLLEYVVKDDVNRRQIAVMKLRENGYDGAARLMNISDAGIEIDGLVS Sbjct: 421 QVDPSSSQLYENMMLLEYVVKDDVNRRQIAVMKLRENGYDGAARLMNISDAGIEIDGLVS 480 Query: 481 PASTPLVDGR 490 PASTPLVDGR Sbjct: 481 PASTPLVDGR 490 >ref|XP_002535762.1| Circadian clock protein kinase kaiC, putative [Ricinus communis] gb|EEF26619.1| Circadian clock protein kinase kaiC, putative [Ricinus communis] Length = 287 Score = 589 bits (1518), Expect = e-166, Method: Compositional matrix adjust. Identities = 287/287 (100%), Positives = 287/287 (100%) Query: 204 MQLVREIKVFKLRGANHLLGKHVFEINQSGVEIFPRFEATATRAGKVPGTSDRYVSVGIP 263 MQLVREIKVFKLRGANHLLGKHVFEINQSGVEIFPRFEATATRAGKVPGTSDRYVSVGIP Sbjct: 1 MQLVREIKVFKLRGANHLLGKHVFEINQSGVEIFPRFEATATRAGKVPGTSDRYVSVGIP 60 Query: 264 SWDKCIGGGVVSGSLTCLLGSPGVGKTLMGLHFIEQGLKDGQQCLILGFYESPERLLAKA 323 SWDKCIGGGVVSGSLTCLLGSPGVGKTLMGLHFIEQGLKDGQQCLILGFYESPERLLAKA Sbjct: 61 SWDKCIGGGVVSGSLTCLLGSPGVGKTLMGLHFIEQGLKDGQQCLILGFYESPERLLAKA 120 Query: 324 RKAGMQLDAHIDSGALQVMWQLPLEMLCDDLAKRMLDDIARRGVTRLLIDGVDGLRSIVV 383 RKAGMQLDAHIDSGALQVMWQLPLEMLCDDLAKRMLDDIARRGVTRLLIDGVDGLRSIVV Sbjct: 121 RKAGMQLDAHIDSGALQVMWQLPLEMLCDDLAKRMLDDIARRGVTRLLIDGVDGLRSIVV 180 Query: 384 QPQRMRPFLVALTNELRARGVTTFITEQLPYFRESRPQVDPSSSQLYENMMLLEYVVKDD 443 QPQRMRPFLVALTNELRARGVTTFITEQLPYFRESRPQVDPSSSQLYENMMLLEYVVKDD Sbjct: 181 QPQRMRPFLVALTNELRARGVTTFITEQLPYFRESRPQVDPSSSQLYENMMLLEYVVKDD 240 Query: 444 VNRRQIAVMKLRENGYDGAARLMNISDAGIEIDGLVSPASTPLVDGR 490 VNRRQIAVMKLRENGYDGAARLMNISDAGIEIDGLVSPASTPLVDGR Sbjct: 241 VNRRQIAVMKLRENGYDGAARLMNISDAGIEIDGLVSPASTPLVDGR 287 >ref|YP_002909431.1| Non-specific serine/threonine protein kinase [Burkholderia glumae BGR1] gb|ACR32196.1| Non-specific serine/threonine protein kinase [Burkholderia glumae BGR1] Length = 499 Score = 412 bits (1058), Expect = e-113, Method: Compositional matrix adjust. Identities = 215/480 (44%), Positives = 305/480 (63%), Gaps = 17/480 (3%) Query: 4 QPQSLPPAPTGGRPSRISLLSTGIAGFDEILGGGLPAGSLYLIQGLAGSGKTTLASQIGW 63 Q S P AP + ++TG+ G DEILGGG G LYLI+G+AG+GKT L+SQIG+ Sbjct: 3 QDDSAPHAPALSDIEPLENVATGVPGLDEILGGGFVRGGLYLIEGMAGAGKTILSSQIGF 62 Query: 64 AQARGGNQVMLLTLIAESHAKMLNHVSNFDFFDESLVGDRMQMLSGYAALASEGLRGLLR 123 + R G +V+ +TLIAESH K+L H+ DFFD + V +M +SGY L +GL G LR Sbjct: 63 HRVRQGERVLYMTLIAESHDKLLGHLRELDFFDPAAVAQKMMFVSGYHELIEDGLDGFLR 122 Query: 124 MISAELSRHRPAMLIIDGFRSVRDSGPSDLNLSEFMHSLNALVFTMNCTTLLLSPVEGNL 183 +I+A L+ +RP +LI+DGFRS R+ ++L+LS+F+H LNALV M CTTLLL+P+ GN Sbjct: 123 LIAASLANYRPGLLIVDGFRSAREFSETELSLSKFIHELNALVAAMGCTTLLLAPLSGNE 182 Query: 184 PESENTLVDGVIELSQYESGMQLVREIKVFKLRGANHLLGKHVFEINQSGVEIFPRFEAT 243 P E+TLVDG+IEL++Y GM+ REI+V K+R NHLLG+H F I SG ++PR EA Sbjct: 183 PHPEHTLVDGLIELNRYTDGMRRAREIEVHKMRARNHLLGRHFFRITSSGHAMYPRLEA- 241 Query: 244 ATRAGKVPGTSD--RYVSVGIPSWDKCIGGGVVSGSLTCLLGSPGVGKTLMGLHFIEQGL 301 R + D + + G+P D+ +GGG V GS T ++G GVGKTL+ L F++ G+ Sbjct: 242 --RFANLEDERDLRQRLDTGLPHLDQLLGGGFVRGSTTTVMGPSGVGKTLLALQFLQAGV 299 Query: 302 KDGQQCLILGFYESPERLLAKARKAGMQLDAHIDSGALQVMWQLPLEMLCDDLAKRMLDD 361 G++ + LGFYESP+RL+ KA G++L G L + WQ +E+ D+LA L Sbjct: 300 ARGEKAVYLGFYESPQRLIGKAETVGIRLREAFADGRLAMQWQPAVELEVDELAANTLAL 359 Query: 362 IARRGVTRLLIDGVDGLRSIVVQPQRMRPFLVALTNELRARGVTTFITEQLPYFRESRPQ 421 I R G +RL+IDG++G R ++P R FL A + LR G+TT +TE+LP + Sbjct: 360 IQRLGASRLVIDGMEGFRDSALRPARFGLFLNAFNHALRDAGITTLLTEELPLY------ 413 Query: 422 VDPSS------SQLYENMMLLEYVVKDDVNRRQIAVMKLRENGYDGAARLMNISDAGIEI 475 DPS S L EN++LL Y D RR ++V+K RE+ +D + R + I+ G+++ Sbjct: 414 ADPSHGKGLRLSALTENLVLLRYAETDGRLRRMLSVVKQRESAHDTSLRELIITPEGLDV 473 >ref|YP_004350403.1| Rad553 [Burkholderia gladioli BSR3] gb|AEA64891.1| Rad553 [Burkholderia gladioli BSR3] Length = 507 Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust. Identities = 220/488 (45%), Positives = 305/488 (62%), Gaps = 30/488 (6%) Query: 23 LSTGIAGFDEILGGGLPAGSLYLIQGLAGSGKTTLASQIGWAQARGGNQVMLLTLIAESH 82 + TG+ G DEILGGG G LYLI+G+AG+GKT L+SQIG+ + R G +V+ +TLIAESH Sbjct: 29 VETGVPGLDEILGGGFVRGGLYLIEGMAGAGKTILSSQIGFHRVRQGERVLYMTLIAESH 88 Query: 83 AKMLNHVSNFDFFDESLVGDRMQMLSGYAALASEGLRGLLRMISAELSRHRPAMLIIDGF 142 K+L H+ +FFD+S V ++ SGY L +GL G L++I+A L+ HRP +LIIDGF Sbjct: 89 DKLLGHLRGLEFFDQSAVAQQLMFESGYHELMRDGLDGFLKLIAASLANHRPGLLIIDGF 148 Query: 143 RSVRDSGPSDLNLSEFMHSLNALVFTMNCTTLLLSPVEGNLPESENTLVDGVIELSQYES 202 RS R+ ++L+LS+F+H LNALV M+CTTLLL+P+ GN P E+TLVDG+IEL++Y Sbjct: 149 RSAREFSETELSLSKFIHELNALVAAMDCTTLLLAPLSGNEPHPEHTLVDGLIELNRYSD 208 Query: 203 GMQLVREIKVFKLRGANHLLGKHVFEINQSGVEIFPRFEATATRAGKVPGTSD--RYVSV 260 GM+ REI+V K+R NHLLGKH F I SG ++PR EA R + D + + Sbjct: 209 GMRRAREIEVHKMRARNHLLGKHFFRITASGHAMYPRLEA---RYANLEDERDLRQRLDT 265 Query: 261 GIPSWDKCIGGGVVSGSLTCLLGSPGVGKTLMGLHFIEQGLKDGQQCLILGFYESPERLL 320 G+P D IGGG V GS T ++G GVGKTL+ L F++ G+ G++ + LGFYESP+RL+ Sbjct: 266 GLPHLDHLIGGGFVRGSTTTVIGPAGVGKTLLALQFLQAGIARGEKVVYLGFYESPQRLI 325 Query: 321 AKARKAGMQLDAHIDSGALQVMWQLPLEMLCDDLAKRMLDDIARRGVTRLLIDGVDGLRS 380 KA G+ L G L + WQ +E+ D+LA L I R G +RL+IDG++G R Sbjct: 326 GKAEAVGILLREGFADGRLTMQWQPAVELEVDELAATTLALIRRLGASRLVIDGMEGFRD 385 Query: 381 IVVQPQRMRPFLVALTNELRARGVTTFITEQLPYFRESRPQVDPSS------SQLYENMM 434 ++P R FL A T+ LR GVTT +TE+LP + DPS S L EN++ Sbjct: 386 SALRPARFGLFLNAFTHALRDSGVTTMLTEELPLY------ADPSHGKGMRLSALTENLI 439 Query: 435 LLEYVVKDDVNRRQIAVMKLRENGYDGAARLMNISDAGIE-------------IDGLVSP 481 LL YV D RR ++V+K RE+ +D + R + I G++ + GL + Sbjct: 440 LLRYVEADGRLRRMVSVVKQRESAHDTSLRELVIKSDGLDVTPNAIGAAGLLSVQGLTTM 499 Query: 482 ASTPLVDG 489 P+ DG Sbjct: 500 LHRPMTDG 507 >ref|ZP_06845506.1| Non-specific serine/threonine protein kinase [Burkholderia sp. Ch1-1] gb|EFG66870.1| Non-specific serine/threonine protein kinase [Burkholderia sp. Ch1-1] Length = 491 Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust. Identities = 211/480 (43%), Positives = 310/480 (64%), Gaps = 10/480 (2%) Query: 7 SLPPAPTGGRPSRISLLSTGIAGFDEILGGGLPAGSLYLIQGLAGSGKTTLASQIGWAQA 66 ++ +PT R S + TG+ GFDEILGGGL G +YL++G+AG+GKT L+SQIG+ + Sbjct: 2 TIHESPTSSR----SNVETGVPGFDEILGGGLVRGGVYLLEGMAGAGKTILSSQIGFHRV 57 Query: 67 RGGNQVMLLTLIAESHAKMLNHVSNFDFFDESLVGDRMQMLSGYAALASEGLRGLLRMIS 126 G +V+ +TLIAESH K+L H+ FFDE+ V +M +SGY L +GL G L++I+ Sbjct: 58 SQGEKVLYMTLIAESHDKLLGHLKGLSFFDENAVAQQMLFVSGYHELMQDGLDGFLKLIA 117 Query: 127 AELSRHRPAMLIIDGFRSVRDSGPSDLNLSEFMHSLNALVFTMNCTTLLLSPVEGNLPES 186 + + +RP+++IIDGFRS R+ ++L+LS+F+H LNALV M+CTTLLL+P+ GN P Sbjct: 118 SSIYDYRPSLMIIDGFRSAREFSETELSLSKFIHELNALVAAMDCTTLLLAPLSGNEPHP 177 Query: 187 ENTLVDGVIELSQYESGMQLVREIKVFKLRGANHLLGKHVFEINQSGVEIFPRFEATATR 246 E+TLVDG+IEL++Y GM+ REI+V K+R NHL+GKH F I +SG+ +FPR EA + Sbjct: 178 EHTLVDGLIELNRYSDGMRRAREIEVHKMRARNHLMGKHFFRIAESGLLMFPRLEA---Q 234 Query: 247 AGKVPGTSD--RYVSVGIPSWDKCIGGGVVSGSLTCLLGSPGVGKTLMGLHFIEQGLKDG 304 PG D + G+P D +GGG GS T L+G GVGKTL+ L F+ G+ G Sbjct: 235 CAVQPGPVDLKTRLGFGLPHLDALLGGGFARGSTTTLIGPSGVGKTLLCLQFLAAGIARG 294 Query: 305 QQCLILGFYESPERLLAKARKAGMQLDAHIDSGALQVMWQLPLEMLCDDLAKRMLDDIAR 364 ++C+ LGFYE P+RL+ KA + L + G L + WQ +E+ D+L L + + Sbjct: 295 ERCVYLGFYEGPQRLIGKAEAVSIGLTEAHEDGRLVIQWQPAIELAVDELPATALATVRK 354 Query: 365 RGVTRLLIDGVDGLRSIVVQPQRMRPFLVALTNELRARGVTTFITEQLPYFRESRPQVDP 424 G +R++IDGV+G R ++ +R FL AL ++LR VTT +TE+LP + +S Sbjct: 355 IGASRIVIDGVEGFRDSALRTERFGLFLNALLHQLREACVTTLLTEELPLYADSSHAKSV 414 Query: 425 SSSQLYENMMLLEYVVKDDVNRRQIAVMKLRENGYDGAARLMNISDAGIE-IDGLVSPAS 483 S L EN++LL Y + RR I+V+K RE+ +D + R + IS G++ ++ L +PAS Sbjct: 415 RVSALTENLLLLRYAETEAGLRRMISVVKQRESAHDTSLRELVISSQGLDVVENLGNPAS 474 >ref|YP_004231028.1| putative circadian clock protein, KaiC [Burkholderia sp. CCGE1001] gb|ADX57968.1| putative circadian clock protein, KaiC [Burkholderia sp. CCGE1001] Length = 490 Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust. Identities = 209/462 (45%), Positives = 300/462 (64%), Gaps = 3/462 (0%) Query: 23 LSTGIAGFDEILGGGLPAGSLYLIQGLAGSGKTTLASQIGWAQARGGNQVMLLTLIAESH 82 + TG+ G DEILGGGL G +YL++G+AG+GKT L+SQIG+ + G +V+ +TLIAESH Sbjct: 14 VETGVPGLDEILGGGLVRGGVYLLEGMAGAGKTILSSQIGFHRVSRGEKVLYMTLIAESH 73 Query: 83 AKMLNHVSNFDFFDESLVGDRMQMLSGYAALASEGLRGLLRMISAELSRHRPAMLIIDGF 142 K+L H+ FFDE+ V +M +SGY L +GL G L++I++ + +RP+++IIDGF Sbjct: 74 DKLLAHLKRLTFFDENAVAQQMLFVSGYHELMQDGLDGFLKLIASSIYDYRPSLMIIDGF 133 Query: 143 RSVRDSGPSDLNLSEFMHSLNALVFTMNCTTLLLSPVEGNLPESENTLVDGVIELSQYES 202 RS R+ ++L+LS+F+H LNALV M+CTTLLL+P+ GN P E+TLVDG+IEL++Y Sbjct: 134 RSAREFSETELSLSKFIHELNALVAAMDCTTLLLAPLSGNEPHPEHTLVDGLIELNRYSD 193 Query: 203 GMQLVREIKVFKLRGANHLLGKHVFEINQSGVEIFPRFEATATRAGKVPGTSDRYVSVGI 262 GM+ REI+V K+R NHL+GKH F I +SG+ +FPR EA A P VS G+ Sbjct: 194 GMRRAREIEVHKMRARNHLMGKHYFRIAESGLLMFPRLEAQHA-APSGPVDLKTRVSFGL 252 Query: 263 PSWDKCIGGGVVSGSLTCLLGSPGVGKTLMGLHFIEQGLKDGQQCLILGFYESPERLLAK 322 P D GGG+ GS T L+G GVGKT++ L F+ G++ G++CL LGFYE P+RL+ K Sbjct: 253 PHLDTMFGGGLSQGSTTTLIGPSGVGKTMLCLQFLAAGVQRGERCLYLGFYEGPQRLIGK 312 Query: 323 ARKAGMQLDAHIDSGALQVMWQLPLEMLCDDLAKRMLDDIARRGVTRLLIDGVDGLRSIV 382 A ++LD G L + WQ +E+ D++A L + G TR++IDGV+G R Sbjct: 313 AEAVSIRLDEAHRDGRLAIQWQPAVELPVDEIAANALATARQMGATRMVIDGVEGFRDSA 372 Query: 383 VQPQRMRPFLVALTNELRARGVTTFITEQLPYFRESRPQVDPSSSQLYENMMLLEYVVKD 442 ++ +R FL AL ++LR G+TT +TE++P + + S L EN++LL Y D Sbjct: 373 LRVERFGLFLNALLHQLREAGMTTLVTEEVPLYPDYGHSRSTRVSALTENLVLLRYTETD 432 Query: 443 DVNRRQIAVMKLRENGYDGAARLMNISDAGIEIDGLVSPAST 484 RR I+V+K RE +D + + IS G+EI + SP ST Sbjct: 433 AGLRRAISVVKQREGAHDPSTHELVISSQGLEI--VESPLST 472 >ref|YP_003608216.1| non-specific serine/threonine protein kinase [Burkholderia sp. CCGE1002] gb|ADG18705.1| Non-specific serine/threonine protein kinase [Burkholderia sp. CCGE1002] Length = 511 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 207/469 (44%), Positives = 301/469 (64%), Gaps = 6/469 (1%) Query: 10 PAPTGGRPSRISL-LSTGIAGFDEILGGGLPAGSLYLIQGLAGSGKTTLASQIGWAQARG 68 P P RP + TG+ GFDEILGGGL +G +YL++G+AG+GKT L+SQIG+ + R Sbjct: 20 PRPDAARPDAARRNVETGVPGFDEILGGGLVSGGVYLLEGMAGAGKTILSSQIGFHRVRQ 79 Query: 69 GNQVMLLTLIAESHAKMLNHVSNFDFFDESLVGDRMQMLSGYAALASEGLRGLLRMISAE 128 G +V+ +TLIAESH K+L H+ FFDE+ V +M +SGY L +GL G L++I++ Sbjct: 80 GEKVLYMTLIAESHDKLLGHLKGLSFFDETAVAQQMLFVSGYHELMQDGLDGFLKLIASS 139 Query: 129 LSRHRPAMLIIDGFRSVRDSGPSDLNLSEFMHSLNALVFTMNCTTLLLSPVEGNLPESEN 188 + +RP+++IIDGFRS R+ ++L+LS+F+H LNALV M+CTTLLL+P+ GN P E+ Sbjct: 140 IYDYRPSLMIIDGFRSAREFSETELSLSKFIHELNALVAAMDCTTLLLAPLSGNEPHPEH 199 Query: 189 TLVDGVIELSQYESGMQLVREIKVFKLRGANHLLGKHVFEINQSGVEIFPRFEATATRAG 248 TLVDG+IEL++Y GM+ REI+V K+R +H +GKH F I SG+ +FPR EA Sbjct: 200 TLVDGLIELNRYHDGMRRAREIEVHKMRARDHQMGKHFFRIAGSGLLMFPRLEA---HCA 256 Query: 249 KVPGTSD--RYVSVGIPSWDKCIGGGVVSGSLTCLLGSPGVGKTLMGLHFIEQGLKDGQQ 306 + PG D + G+P D +GGG GS T L+G GVGKTL+ L F+ GL ++ Sbjct: 257 QQPGPVDLKARLGFGLPHLDNLLGGGFAQGSTTTLIGPSGVGKTLLCLQFLAAGLARSER 316 Query: 307 CLILGFYESPERLLAKARKAGMQLDAHIDSGALQVMWQLPLEMLCDDLAKRMLDDIARRG 366 C+ LGFYE P+RL+ KA + L G L V+WQ +E+ D++A + L + + G Sbjct: 317 CVYLGFYEGPQRLIGKAEAVSIPLADAWQDGRLVVLWQPAIELAIDEIAAKALVTVKQTG 376 Query: 367 VTRLLIDGVDGLRSIVVQPQRMRPFLVALTNELRARGVTTFITEQLPYFRESRPQVDPSS 426 TR++IDGV+G R ++ +R FL AL ++LR +TT ITE+LP + E Sbjct: 377 ATRIVIDGVEGFRDSALRTERFGLFLNALLHQLREAAITTLITEELPLYSEPGHAKAVRV 436 Query: 427 SQLYENMMLLEYVVKDDVNRRQIAVMKLRENGYDGAARLMNISDAGIEI 475 S L EN++LL Y + RR I+V+K RE+ +D + ++IS G+++ Sbjct: 437 SALTENLVLLRYAETEGGLRRMISVVKQRESAHDTSLHELSISSQGLDV 485 >ref|YP_554813.1| hypothetical protein Bxe_B0484 [Burkholderia xenovorans LB400] gb|ABE35463.1| RAD55 [Burkholderia xenovorans LB400] Length = 491 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 209/464 (45%), Positives = 307/464 (66%), Gaps = 6/464 (1%) Query: 21 SLLSTGIAGFDEILGGGLPAGSLYLIQGLAGSGKTTLASQIGWAQARGGNQVMLLTLIAE 80 S + TG+ GFDEILGGGL G +YL++G+AG+GKT L+SQIG+ + G +V+ +TLIAE Sbjct: 12 SNVETGVPGFDEILGGGLVRGGVYLLEGMAGAGKTILSSQIGFHRVSQGEKVLYMTLIAE 71 Query: 81 SHAKMLNHVSNFDFFDESLVGDRMQMLSGYAALASEGLRGLLRMISAELSRHRPAMLIID 140 SH K+L H+ FFDE+ V +M +SGY L +GL G L++I++ + +RP+++IID Sbjct: 72 SHDKLLGHLKGLSFFDENAVAQQMLFVSGYHELMQDGLDGFLKLIASSIYDYRPSLMIID 131 Query: 141 GFRSVRDSGPSDLNLSEFMHSLNALVFTMNCTTLLLSPVEGNLPESENTLVDGVIELSQY 200 GFRS R+ ++L+LS+F+H LNALV M+CTTLLL+P+ GN P E+TLVDG+IEL++Y Sbjct: 132 GFRSAREFSETELSLSKFIHELNALVAAMDCTTLLLAPLSGNEPHPEHTLVDGLIELNRY 191 Query: 201 ESGMQLVREIKVFKLRGANHLLGKHVFEINQSGVEIFPRFEATATRAGKVPGTSD--RYV 258 GM+ REI+V K+R NHL+GKH F I +SG+ +FPR EA + AG+ PG D + Sbjct: 192 SDGMRRAREIEVHKMRARNHLMGKHFFRIAESGLLMFPRIEAQS--AGQ-PGPVDLKTRL 248 Query: 259 SVGIPSWDKCIGGGVVSGSLTCLLGSPGVGKTLMGLHFIEQGLKDGQQCLILGFYESPER 318 G+P D +GGG GS T L+G GVGKTL+ L F+ G+ G++C+ LGFYE P+R Sbjct: 249 GFGLPHLDALLGGGFAQGSTTTLIGPSGVGKTLLCLQFLAAGIARGERCVYLGFYEGPQR 308 Query: 319 LLAKARKAGMQLDAHIDSGALQVMWQLPLEMLCDDLAKRMLDDIARRGVTRLLIDGVDGL 378 L+ KA ++L + G L + WQ +E+ D+LA +L + + G +R++IDGV+G Sbjct: 309 LIGKADAVSIRLAEAHEDGRLAIQWQPAIELAVDELAATVLATVRKIGASRIVIDGVEGF 368 Query: 379 RSIVVQPQRMRPFLVALTNELRARGVTTFITEQLPYFRESRPQVDPSSSQLYENMMLLEY 438 R ++ +R FL AL ++LR VTT +TE+LP + + S L EN++LL Y Sbjct: 369 RDSALRTERFGLFLNALLHQLREACVTTLLTEELPLYADPGHAKSVRVSALTENLLLLRY 428 Query: 439 VVKDDVNRRQIAVMKLRENGYDGAARLMNISDAGIE-IDGLVSP 481 + RR I+V+K RE+ +D + R + IS G++ ++ L SP Sbjct: 429 AETEAGLRRMISVVKQRESAHDTSLRELVISSHGLDVVENLGSP 472 >ref|YP_003910132.1| Non-specific serine/threonine protein kinase [Burkholderia sp. CCGE1003] gb|ADN60841.1| Non-specific serine/threonine protein kinase [Burkholderia sp. CCGE1003] Length = 488 Score = 389 bits (998), Expect = e-106, Method: Compositional matrix adjust. Identities = 205/465 (44%), Positives = 300/465 (64%), Gaps = 5/465 (1%) Query: 11 APTGGRPSRISLLSTGIAGFDEILGGGLPAGSLYLIQGLAGSGKTTLASQIGWAQARGGN 70 +PT R + + TG+ G DEILGGGL G +YL++G+AG+GKT L+SQIG+ + G Sbjct: 4 SPTSPRAN----VETGVPGLDEILGGGLVQGGVYLLEGMAGAGKTILSSQIGFHRVSRGE 59 Query: 71 QVMLLTLIAESHAKMLNHVSNFDFFDESLVGDRMQMLSGYAALASEGLRGLLRMISAELS 130 +V+ +TLIAESH K+L H+ FFDE V +M +SGY L +GL G L++I++ + Sbjct: 60 KVLYMTLIAESHDKLLAHLKGLSFFDEKAVAQQMLFVSGYHELMQDGLDGFLKLIASSIY 119 Query: 131 RHRPAMLIIDGFRSVRDSGPSDLNLSEFMHSLNALVFTMNCTTLLLSPVEGNLPESENTL 190 +RP+++IIDGFRS R+ ++L+LS+F+H LNALV MNCTTLLL+P+ GN P E+TL Sbjct: 120 DYRPSLMIIDGFRSAREFSETELSLSKFIHELNALVAAMNCTTLLLAPLSGNEPHPEHTL 179 Query: 191 VDGVIELSQYESGMQLVREIKVFKLRGANHLLGKHVFEINQSGVEIFPRFEATATRAGKV 250 VDG+IEL++Y GM+ REI+V K+R NHL+GKH F I +SG+ ++PR EA A + Sbjct: 180 VDGLIELNRYSDGMRRAREIEVHKMRARNHLMGKHFFRIAESGLLMYPRLEAQPA-AARG 238 Query: 251 PGTSDRYVSVGIPSWDKCIGGGVVSGSLTCLLGSPGVGKTLMGLHFIEQGLKDGQQCLIL 310 P VS G+P D GGG+ GS T ++G GVGKTL+ L F+ G++ G++CL L Sbjct: 239 PVDLKTRVSFGLPRLDAMFGGGLSLGSTTTMIGPSGVGKTLLCLQFLAAGIERGERCLYL 298 Query: 311 GFYESPERLLAKARKAGMQLDAHIDSGALQVMWQLPLEMLCDDLAKRMLDDIARRGVTRL 370 GFYE P+RL+ KA + LD G L + WQ +E+ D++A L + G TR+ Sbjct: 299 GFYEGPQRLIGKAEAVSIGLDEAYRDGRLVIQWQPAVELAIDEIAANALATAKQMGATRV 358 Query: 371 LIDGVDGLRSIVVQPQRMRPFLVALTNELRARGVTTFITEQLPYFRESRPQVDPSSSQLY 430 +IDGV+G R ++ +R FL A+ ++LR G+TT +TE++ + + S L Sbjct: 359 VIDGVEGFRDSALRIERFGLFLNAMLHQLREAGITTLVTEEVALYPDYGQSRSTRVSALT 418 Query: 431 ENMMLLEYVVKDDVNRRQIAVMKLRENGYDGAARLMNISDAGIEI 475 EN++LL Y D RR I+++K RE+ +D + R + IS G++I Sbjct: 419 ENLVLLRYAETDAGARRAISIVKQRESAHDPSTRELVISSQGLDI 463 >ref|YP_001887773.1| Non-specific serine/threonine protein kinase [Burkholderia phytofirmans PsJN] gb|ACD18403.1| Non-specific serine/threonine protein kinase [Burkholderia phytofirmans PsJN] Length = 491 Score = 385 bits (989), Expect = e-105, Method: Compositional matrix adjust. Identities = 207/464 (44%), Positives = 300/464 (64%), Gaps = 5/464 (1%) Query: 21 SLLSTGIAGFDEILGGGLPAGSLYLIQGLAGSGKTTLASQIGWAQARGGNQVMLLTLIAE 80 S + TG+ G DEILGGGL G +YL++G+AG+GKT L+SQIG+ + G +V+ +TLIAE Sbjct: 12 SNVETGVPGLDEILGGGLVRGGVYLLEGMAGAGKTILSSQIGFHRVSQGEKVLYMTLIAE 71 Query: 81 SHAKMLNHVSNFDFFDESLVGDRMQMLSGYAALASEGLRGLLRMISAELSRHRPAMLIID 140 SH K+L H+ FFDE V +M +SGY L +GL G L++I++ + +RP+++IID Sbjct: 72 SHDKLLGHLKGLSFFDEKAVAQQMLFVSGYHELMKDGLDGFLKLIASSIYDYRPSLMIID 131 Query: 141 GFRSVRDSGPSDLNLSEFMHSLNALVFTMNCTTLLLSPVEGNLPESENTLVDGVIELSQY 200 GFRS R+ ++L+LS+F+H LNALV M+CTTLLL+P+ GN P E+TLVDG+IEL++Y Sbjct: 132 GFRSAREFSETELSLSKFIHELNALVAAMDCTTLLLAPLSGNEPHPEHTLVDGLIELNRY 191 Query: 201 ESGMQLVREIKVFKLRGANHLLGKHVFEINQSGVEIFPRFEA-TATRAGKVPGTSDRYVS 259 GM+ REI+V K+R NHL+GKH F I +SG+ +FPR EA A +AG P + Sbjct: 192 SDGMRRAREIEVHKMRARNHLMGKHFFRIAESGLLMFPRLEAQCAAQAG--PVDLKTRLG 249 Query: 260 VGIPSWDKCIGGGVVSGSLTCLLGSPGVGKTLMGLHFIEQGLKDGQQCLILGFYESPERL 319 +P D +GGG GS T L+G GVGKTL+ L F+ G+ G++CL LGFYE P+RL Sbjct: 250 FALPHLDGLLGGGFAQGSTTTLVGPSGVGKTLLCLQFLAAGVARGERCLYLGFYEGPQRL 309 Query: 320 LAKARKAGMQLDAHIDSGALQVMWQLPLEMLCDDLAKRMLDDIARRGVTRLLIDGVDGLR 379 + KA + L G L + WQ +E+ D+LA L + + G +R++IDGV+G R Sbjct: 310 IGKAEAVSIGLANAYQDGRLVIQWQPAIELAVDELAATALATVKKIGASRIVIDGVEGFR 369 Query: 380 SIVVQPQRMRPFLVALTNELRARGVTTFITEQLPYFRESRPQVDPSSSQLYENMMLLEYV 439 ++ +R FL AL ++LR +TT +TE+LP + + S L EN++LL Y Sbjct: 370 DSALRTERFGLFLNALLHQLREACITTLLTEELPLYADPGHARSVRVSALTENLVLLRYA 429 Query: 440 VKDDVNRRQIAVMKLRENGYDGAARLMNISDAGIEIDGLVSPAS 483 D RR I+V+K RE+ +D + R + IS G+++ + +PAS Sbjct: 430 ETDTGLRRMISVVKQRESAHDTSLRELVISSQGLDV--IENPAS 471