BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0036.0040.p (380 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777149.1| porin signal peptide protein [Herbaspirillum... 761 0.0 ref|YP_004752740.1| outer membrane porin, ompC family [Collimona... 540 e-151 ref|YP_556160.1| OmpC family outer membrane porin [Burkholderia ... 400 e-109 ref|YP_001565451.1| porin [Delftia acidovorans SPH-1] >gi|160365... 388 e-105 ref|YP_004487744.1| porin [Delftia sp. Cs1-4] >gi|333744212|gb|A... 387 e-105 ref|ZP_03263996.1| outer membrane porin, OmpC family [Burkholder... 188 1e-45 ref|YP_003774755.1| outer membrane porin, OmpC family protein [H... 185 1e-44 ref|ZP_06844426.1| porin Gram-negative type [Burkholderia sp. Ch... 156 5e-36 ref|YP_552978.1| OmpC family outer membrane porin [Burkholderia ... 152 7e-35 ref|YP_368624.1| outer membrane protein, (porin) [Burkholderia s... 140 3e-31 >ref|YP_003777149.1| porin signal peptide protein [Herbaspirillum seropedicae SmR1] gb|ADJ65241.1| porin signal peptide protein [Herbaspirillum seropedicae SmR1] Length = 380 Score = 761 bits (1964), Expect = 0.0, Method: Compositional matrix adjust. Identities = 377/380 (99%), Positives = 378/380 (99%) Query: 1 MTKPSIRTPVAMGLLLAASGSALAQSASNVTLYGTVDQYLGYMRSSSGKSLWALNDGAIL 60 MTKPSIRTPVAMGLLLAASGSALAQSASNVTLYGT+DQYLGYMRSSSGKSLWALNDGAIL Sbjct: 1 MTKPSIRTPVAMGLLLAASGSALAQSASNVTLYGTLDQYLGYMRSSSGKSLWALNDGAIL 60 Query: 61 RSRIGLKGYEDLGGGYATTFTLENGFSADTGAQADGARLFDRQSWVGIKTPAAGEFRIGR 120 RSRIGLKGYEDLGGGYATTFTLENGFSADTGAQADG RLFDRQSWVGIKTPAAGEFRIGR Sbjct: 61 RSRIGLKGYEDLGGGYATTFTLENGFSADTGAQADGTRLFDRQSWVGIKTPAAGEFRIGR 120 Query: 121 QNSVPFFIGGAIDYTERTTYGSIINTFGVPSRFDNDLSWKSPRWAGLQIDLHYAMPETAG 180 QNSVPFFIGGAIDYTERTTYGSIINTFGVPSRFDNDLSWKSPRWAGLQIDLHYAMPETAG Sbjct: 121 QNSVPFFIGGAIDYTERTTYGSIINTFGVPSRFDNDLSWKSPRWAGLQIDLHYAMPETAG 180 Query: 181 EGLGRRGVYQLGIDYINGPYRAGYAGLMAKPNAGGLYDNAVQYHNVYLNYDYGPGKVYLA 240 EGLGRRGVYQLGIDYINGPYRAGYAGLMAKPNAGGLYDNAVQYHNVYLNYDYGPGKVYLA Sbjct: 181 EGLGRRGVYQLGIDYINGPYRAGYAGLMAKPNAGGLYDNAVQYHNVYLNYDYGPGKVYLA 240 Query: 241 YVRSNNTTANANGNNAATILNNVSNPNNFFAGNDANVQRFYNVYQISADYRLTPQLRIGA 300 YVRSNNTTAN NGNNAATILNNVSNPNNFFAGNDANVQRFYNVYQISADYRLTPQLRIGA Sbjct: 241 YVRSNNTTANTNGNNAATILNNVSNPNNFFAGNDANVQRFYNVYQISADYRLTPQLRIGA 300 Query: 301 LYGVMVDTSHKEGGAQGGNVGAYYDLSKRTTLYGFANYMKNQANAGWRFSGSAGPGSNLA 360 LYGVMVDTSHKEGGAQGGNVGAYYDLSKRTTLYGFANYMKNQANAGWRFSGSAGPGSNLA Sbjct: 301 LYGVMVDTSHKEGGAQGGNVGAYYDLSKRTTLYGFANYMKNQANAGWRFSGSAGPGSNLA 360 Query: 361 GADINGKSLVGLQMGILHRF 380 GADINGKSLVGLQMGILHRF Sbjct: 361 GADINGKSLVGLQMGILHRF 380 >ref|YP_004752740.1| outer membrane porin, ompC family [Collimonas fungivorans Ter331] gb|AEK61917.1| outer membrane porin, OmpC family [Collimonas fungivorans Ter331] Length = 405 Score = 540 bits (1390), Expect = e-151, Method: Compositional matrix adjust. Identities = 265/363 (73%), Positives = 304/363 (83%), Gaps = 1/363 (0%) Query: 18 ASGSALAQSASNVTLYGTVDQYLGYMRSSSGKSLWALNDGAILRSRIGLKGYEDLGGGYA 77 A S LAQ+ N+TLYG +DQYLGY+ SSSGKS+ LNDGAILRSR+GL+G E+LGGGY Sbjct: 44 AGCSVLAQAEPNLTLYGDLDQYLGYIHSSSGKSVTGLNDGAILRSRLGLRGVEELGGGYQ 103 Query: 78 TTFTLENGFSADTGAQADGARLFDRQSWVGIKTPAAGEFRIGRQNSVPFFIGGAIDYTER 137 T FTLE G +A+TG AD +RLFDRQ+WVG+ TPA GEFR+GRQNS+ FFIGGAIDYTER Sbjct: 104 TRFTLEQGLNANTGGAADSSRLFDRQAWVGMNTPA-GEFRVGRQNSIVFFIGGAIDYTER 162 Query: 138 TTYGSIINTFGVPSRFDNDLSWKSPRWAGLQIDLHYAMPETAGEGLGRRGVYQLGIDYIN 197 TTYGS+INTFGVPSR+DND+S+KSPR AG Q D HYA+ ETAGE +G RGVYQLG+DY Sbjct: 163 TTYGSVINTFGVPSRYDNDISYKSPRVAGFQFDAHYALTETAGESVGARGVYQLGLDYSK 222 Query: 198 GPYRAGYAGLMAKPNAGGLYDNAVQYHNVYLNYDYGPGKVYLAYVRSNNTTANANGNNAA 257 GPYRAGYAGL AKP A + V YHN+Y NYDYG GK+Y AYVRSNN T+NA+GN AA Sbjct: 223 GPYRAGYAGLWAKPAANAQFSEKVVYHNLYANYDYGKGKLYFAYVRSNNVTSNASGNTAA 282 Query: 258 TILNNVSNPNNFFAGNDANVQRFYNVYQISADYRLTPQLRIGALYGVMVDTSHKEGGAQG 317 ILNNVS P N F G +A+VQR YN++Q+SADYRL+PQ RIGALYGVM DTS ++ GAQG Sbjct: 283 AILNNVSIPGNAFTGANADVQRMYNIFQVSADYRLSPQWRIGALYGVMQDTSQRDSGAQG 342 Query: 318 GNVGAYYDLSKRTTLYGFANYMKNQANAGWRFSGSAGPGSNLAGADINGKSLVGLQMGIL 377 GN+G YYDLSKRTTLYGFA+YMKN ANAG+RFSGSAGP +NLAGADINGKSL GLQ GIL Sbjct: 343 GNLGTYYDLSKRTTLYGFASYMKNDANAGFRFSGSAGPTANLAGADINGKSLAGLQAGIL 402 Query: 378 HRF 380 HRF Sbjct: 403 HRF 405 >ref|YP_556160.1| OmpC family outer membrane porin [Burkholderia xenovorans LB400] gb|ABE36810.1| outer membrane porin, OmpC family [Burkholderia xenovorans LB400] Length = 372 Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust. Identities = 199/367 (54%), Positives = 258/367 (70%), Gaps = 2/367 (0%) Query: 14 LLLAASGSALAQSASNVTLYGTVDQYLGYMRSSSGKSLWALNDGAILRSRIGLKGYEDLG 73 L+L S + ++ S+VTLYG +DQ++ Y +SSGKSL AL DGA+ RSRIG KG ED+G Sbjct: 8 LMLFLSFCTVCRAQSSVTLYGILDQFVAYEHTSSGKSLVALGDGALARSRIGFKGVEDIG 67 Query: 74 GGYATTFTLENGFSADTGAQADGARLFDRQSWVGIKTPAAGEFRIGRQNSVPFFIGGAID 133 GGY F LE+GF+AD+GA AD +RLFDRQ+WVGI TP G+FR+GRQNS F ID Sbjct: 68 GGYQIIFQLESGFNADSGALADSSRLFDRQAWVGINTPV-GQFRVGRQNSAAFNSSPEID 126 Query: 134 YTERTTYGSIINTFGVPSRFDNDLSWKSPRWAGLQIDLHYAMPETAGEGLGRRGVYQLGI 193 ++ R SI+N FG+P R+D+D+ +KSPR QI+ HYAMP AG GL R VYQ+ + Sbjct: 127 WSSRAMLTSIVNNFGLPGRYDDDIVYKSPRVYDFQIEAHYAMPGIAGGGLNRGAVYQIWV 186 Query: 194 DYINGPYRAGYAGLMAKPNAGGLYDNAVQYHNVYLNYDYGPGKVYLAYVRSNNTTANANG 253 D+ +GPY+A Y G +A P A +Y VQYH NYDYG GK Y AY+ SNN T++A+G Sbjct: 187 DWAHGPYQAAYVGTVAVPLASAIYKEVVQYHQFTANYDYGRGKFYFAYIHSNNATSSASG 246 Query: 254 NNAATILNNVSNPNNFFAGNDANVQRFYNVYQISADYRLTPQLRIGALYGVMVDTSHKEG 313 N+A IL+ +S PNN+ G +VQRFYNV+Q+S DYR++P IGAL G++ D S + Sbjct: 247 NDAVGILSAISVPNNYVLGTTPDVQRFYNVFQVSVDYRISPAFTIGALIGMIRDQSGQGN 306 Query: 314 GAQGGNVGAYYDLSKRTTLYGFANYMKNQANAGWRFSGSAGPGSNLAGADINGKSLVGLQ 373 GGNVG Y +SKRT+ YG A MKN+ NAG+RFSGS P N G+DING++L+GLQ Sbjct: 307 DVYGGNVGFIYSVSKRTSFYGSAGLMKNENNAGFRFSGSGAP-PNFTGSDINGRNLIGLQ 365 Query: 374 MGILHRF 380 +GILH F Sbjct: 366 LGILHLF 372 >ref|YP_001565451.1| porin [Delftia acidovorans SPH-1] gb|ABX37066.1| porin Gram-negative type [Delftia acidovorans SPH-1] Length = 383 Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust. Identities = 206/372 (55%), Positives = 262/372 (70%), Gaps = 9/372 (2%) Query: 10 VAMGLLLAASGSALAQSASNVTLYGTVDQYLGYMRSSSGKSLWALNDGAILRSRIGLKGY 69 +A+ +L A G+ A + S+VT+YG+VDQY+ +MRSSSG S+ L DGA+LRSR+G +G+ Sbjct: 20 LALTTVLGAWGAG-AHAQSSVTIYGSVDQYINHMRSSSGASMTTLEDGALLRSRLGFRGH 78 Query: 70 EDLGGGYATTFTLENGFSADTGAQADGARLFDRQSWVGIKTPAAGEFRIGRQNSVPFFIG 129 EDLGGG F LE G +AD G QAD R FDRQSWVG+ GE R+GRQN+V F G Sbjct: 79 EDLGGGLYAKFQLEMGINADNGTQADSTRGFDRQSWVGLG-GGWGEVRLGRQNTVIFGRG 137 Query: 130 GAIDYTERTTYGSIINTFGVPSRFDNDLSWKSPRWAGLQIDLHYAMPETAGEGLGRRGVY 189 ID+T R T GS++N FGVPSRFDND+S+ SPR AG + HYAM ET R+ +Y Sbjct: 138 DYIDFTSR-TLGSMVNNFGVPSRFDNDISYTSPRMAGFLFEAHYAMAETGAP--ARQAIY 194 Query: 190 QLGIDYINGPYRAGYAGLMAKPNAGGLYDNAVQYHNVYLNYDYGPGKVYLAYVRSNNTTA 249 QLG+DY+NGPYR GYAGL A+ Y +AV+Y N+Y NYDYG GKV LA+VRSNN+TA Sbjct: 195 QLGLDYLNGPYRVGYAGLYARAPQNAAYTDAVRYDNLYANYDYGKGKVQLAFVRSNNSTA 254 Query: 250 NANGNNAATILNNVSNPNNFFAGNDANVQRFYNVYQISADYRLTPQLRIGALYGVMVDTS 309 + GNN T+L NV AG +A+V+RFY V+Q+SADYR+TPQLR+GAL+G + D S Sbjct: 255 GSAGNNTGTVLGNVG---GLVAGTNADVRRFYRVWQLSADYRVTPQLRVGALWGRIQDGS 311 Query: 310 HKEGGAQGGNVGAYYDLSKRTTLYGFANYMKNQANAGWRFSGSAGPGSNLAGA-DINGKS 368 GA GG V AYYDLSKRT LY A +KN NAG+R + S G N A D+NG++ Sbjct: 312 DSGRGASGGAVAAYYDLSKRTMLYAVAEQLKNDRNAGFRLAASGGMKPNFTSADDVNGRT 371 Query: 369 LVGLQMGILHRF 380 + G+Q+G+LHRF Sbjct: 372 IKGVQLGVLHRF 383 >ref|YP_004487744.1| porin [Delftia sp. Cs1-4] gb|AEF89389.1| porin Gram-negative type [Delftia sp. Cs1-4] Length = 383 Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust. Identities = 206/372 (55%), Positives = 261/372 (70%), Gaps = 9/372 (2%) Query: 10 VAMGLLLAASGSALAQSASNVTLYGTVDQYLGYMRSSSGKSLWALNDGAILRSRIGLKGY 69 +A+ +L A G+ AQ+ S+VT+YG+VDQY+ +MRSSSG S+ L DGA+LRSR+G +G Sbjct: 20 LALTTVLGAWGAG-AQAQSSVTIYGSVDQYINHMRSSSGASMTTLEDGALLRSRLGFRGQ 78 Query: 70 EDLGGGYATTFTLENGFSADTGAQADGARLFDRQSWVGIKTPAAGEFRIGRQNSVPFFIG 129 EDLGGG F LE G +AD G QAD R FDRQSWVG+ GE R+GRQN+V F G Sbjct: 79 EDLGGGLYAKFQLEMGINADNGTQADSTRGFDRQSWVGLG-GGWGEVRLGRQNTVIFGRG 137 Query: 130 GAIDYTERTTYGSIINTFGVPSRFDNDLSWKSPRWAGLQIDLHYAMPETAGEGLGRRGVY 189 ID+T R T GS++N FGVPSRFDND+S+ SPR AG + HYAM ET R+ +Y Sbjct: 138 DYIDFTSR-TLGSMVNNFGVPSRFDNDISYTSPRMAGFLFEAHYAMAETGAP--ARQAIY 194 Query: 190 QLGIDYINGPYRAGYAGLMAKPNAGGLYDNAVQYHNVYLNYDYGPGKVYLAYVRSNNTTA 249 QLG+DY+N PYR GYAGL A+ Y +AV+Y N+Y NYDYG GKV LA+VRSNN+TA Sbjct: 195 QLGLDYLNAPYRVGYAGLYARAPQSAAYTDAVRYDNLYANYDYGKGKVQLAFVRSNNSTA 254 Query: 250 NANGNNAATILNNVSNPNNFFAGNDANVQRFYNVYQISADYRLTPQLRIGALYGVMVDTS 309 + GNN T+L NV AG +A+V+RFY V+Q+SADYR+TPQLR+GAL+G + D S Sbjct: 255 GSAGNNTGTVLGNV---GGLVAGTNADVRRFYRVWQLSADYRVTPQLRVGALWGRIQDGS 311 Query: 310 HKEGGAQGGNVGAYYDLSKRTTLYGFANYMKNQANAGWRFSGSAGPGSNLAGA-DINGKS 368 GA GG V AYYDLSKRT LY A +KN NAG+R + S G N A D+NG++ Sbjct: 312 DSGRGASGGAVAAYYDLSKRTMLYAVAEQLKNDRNAGFRLAASGGMKPNFTSADDVNGRT 371 Query: 369 LVGLQMGILHRF 380 + G+Q+G+LHRF Sbjct: 372 IKGVQLGVLHRF 383 >ref|ZP_03263996.1| outer membrane porin, OmpC family [Burkholderia sp. H160] gb|EEA04370.1| outer membrane porin, OmpC family [Burkholderia sp. H160] Length = 374 Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 142/366 (38%), Positives = 189/366 (51%), Gaps = 17/366 (4%) Query: 21 SALAQSASNVTLYGTVDQYLGYMRSS-SGKS--LWALNDGAILRSRIGLKGYEDLGGGYA 77 SA A + S+VTLYG +D + GY + SGK+ L L + + SR GL+G EDLGGGY Sbjct: 20 SAPAMAQSSVTLYGVLDVFAGYQNTKVSGKTTTLAVLGNNGEMTSRWGLRGTEDLGGGYH 79 Query: 78 TTFTLENGFSADTGAQADGARLFDRQSWVGIKTPAAGEFRIGRQNSVPFFIGGAIDYTER 137 F LENGF TG + R FDRQ+WVG+ + GE R+GRQNS F G +D Sbjct: 80 VNFALENGFDPGTGKVQNSFRFFDRQAWVGV-SGGFGELRLGRQNSPMFAYSGNMDAFSA 138 Query: 138 TTYGSIINTFG-VPSRFDNDLSWKSPRWAGLQIDLHYAMPETAGEGLGRRGVYQLGIDYI 196 TY S N F +R DND++W SP++AG Q++LHY++ G L VYQ G+ Sbjct: 139 ATYASGFNNFSNWQARVDNDIAWISPKFAGTQVELHYSVGGQPGT-LAGNAVYQAGVQTA 197 Query: 197 NGPYRAGYAGLMAKPNAGGLYDNAVQYHNVYLNYDYGPGKVYLAYVRSNNTTANANGNNA 256 GP Y L A N VQ N DYG G++YL Y R+N + GN Sbjct: 198 QGPV---YFALAYLNAANATVSNRVQEFMAGGNVDYGWGRIYLGYFRANAVISATTGN-- 252 Query: 257 ATILNNVSNPNNFFAGNDANVQ-RFYNVYQISADYRLTPQLRIGALYGVMVDTSHKEGGA 315 L+N + + G N +++ Y +SADYR +P +GA D++H A Sbjct: 253 --ALSNPAGKYDPAVGPVGNTPGDWHSTYSLSADYRFSPFFSVGAGAAYTKDSTHLGNDA 310 Query: 316 QGGNVGAYYDLSKRTTLYGFANYMKNQANAGWRFSG-SAGPGSNLAGADINGKSLVGLQM 374 A YDLSK T LYG + +KN A ++ +G S GS L G+S G+Q Sbjct: 311 FQYGAIANYDLSKATRLYGTISELKNYGTAQFKMAGASITTGSFLTPGP--GQSQFGVQF 368 Query: 375 GILHRF 380 GI H F Sbjct: 369 GIRHLF 374 >ref|YP_003774755.1| outer membrane porin, OmpC family protein [Herbaspirillum seropedicae SmR1] gb|ADJ62847.1| outer membrane porin, OmpC family protein [Herbaspirillum seropedicae SmR1] Length = 346 Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 130/368 (35%), Positives = 189/368 (51%), Gaps = 36/368 (9%) Query: 16 LAASGSALAQSASNVTLYGTVDQYLGYMRSSSGKSLWALNDGAILRSRIGLKGYEDLGGG 75 L +G ALAQS NVTLYG +D Y+GY ++ S+ +L+ G SR+G KG EDLGGG Sbjct: 12 LLCAGGALAQS--NVTLYGVIDTYMGYTNATGKGSVASLDSGGYQASRVGFKGSEDLGGG 69 Query: 76 YATTFTLENGFSADTGAQADGARLFDRQSWVGIKTPAAGEFRIGRQNSVPFFIGGAIDYT 135 F +ENGF++D+GA D RLF+RQSWVG+ GE R+GRQNS F + +D Sbjct: 70 LRANFQMENGFASDSGAMHDSTRLFNRQSWVGLGNE-LGELRLGRQNSPGFLMIARLDAF 128 Query: 136 ERTTYGSIINTFGV-PSRFDNDLSWKSPRWAGLQIDLHYAMPETAGEGLGRRGVYQLGID 194 TY S +N R+DN + + SP G ++ +Y + E R G L Sbjct: 129 AGATYASFLNNVSAYTPRYDNVIGYLSPVMRGFRVQAYYGLGEQTAP---RNG---LSTA 182 Query: 195 YINGPYRAGYAGLMAKPNAGGLYDNAVQYHNVYLN--YDYGPGKVYLAYVRSNNTTANAN 252 + G Y +G L +A ++ + + + YDYG GKV+L Y R NN A A+ Sbjct: 183 MLAGEYESGPLYLGVSSSAQNSANDNITIRSTFAGGAYDYGSGKVFLGYYRGNNLGAAAS 242 Query: 253 GNNAATILNNVSNPNNFFAGNDANVQRFYNVYQISADYRLTPQLRIGALYGVMVDTSHKE 312 N + +Y+ Y +SA+YRLT Q +GA YG D++ Sbjct: 243 ANTPGS---------------------YYSAYSLSANYRLTGQATLGAGYGWAKDSTGAG 281 Query: 313 GGAQGGNVGAYYDLSKRTTLYGFANYMKNQANAGWRFSGSAGPGSNLAGADINGKSLVGL 372 A+ ++ YDLS+RT LY ++ N A + +G+A N A ++G ++ G+ Sbjct: 282 RNARQFSLIGTYDLSRRTMLYATYAHLANNNGASFSLAGAAPITKN---APVSGGTVNGV 338 Query: 373 QMGILHRF 380 Q+GI H F Sbjct: 339 QVGIRHLF 346 >ref|ZP_06844426.1| porin Gram-negative type [Burkholderia sp. Ch1-1] gb|EFG67913.1| porin Gram-negative type [Burkholderia sp. Ch1-1] Length = 349 Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 127/384 (33%), Positives = 178/384 (46%), Gaps = 47/384 (12%) Query: 7 RTPVAMGLLLAASGSALAQSA-SNVTLYGTVDQYLGYMRSSSGKSLWALNDGAILRSRIG 65 + +A L A G+ A + VTLYG +D YLGY + + A+ G + SR+G Sbjct: 3 KMALACSAALVALGTVTVTPARAEVTLYGILDTYLGYTNAGGKGAQTAMQSGGLSASRVG 62 Query: 66 LKGYEDLGGGYATTFTLENGFSADTGAQADGARLFDRQSWVGIKTPAAGEFRIGRQNSVP 125 ++G EDLGGG TF LENG ++GA D F R +WVG+ TP GEFR GRQNSV Sbjct: 63 IRGSEDLGGGLRATFDLENGILTNSGAATDSTLAFSRSAWVGLGTP-YGEFRFGRQNSVL 121 Query: 126 FFIGGAIDYTERTTYGSIINTFGVPS-RFDNDLSWKSPRWAGLQIDLHYAMPETAGEGLG 184 + D TYGS ++ S R+DN +++ SP AG +AG LG Sbjct: 122 LLMHSKFDAFSGGTYGSFLHNASTFSFRYDNMITYWSPNIAGFTF--------SAGASLG 173 Query: 185 RR-------GVYQLGIDYINGPYRAGYAGLMAKPNAGGLYDNAVQYHNVYLNYDYGPGKV 237 + Y IDY GP Y G+ G N + +Y +G Sbjct: 174 GQTSPHDALNAYVGSIDYQRGPL---YLGVSHAEQNGANGKNITKTTFAGGSYQFGSLTG 230 Query: 238 YLAYVRSNNTTANANGNNAATILNNVSNPNNFFAGNDANVQ-RFYNVYQISADYRLTPQL 296 Y Y R NN G+N +T NVQ ++++VY +S Y +TP L Sbjct: 231 YFGYYRGNNL-----GSNIST-----------------NVQGKYHSVYSLSTTYNVTPAL 268 Query: 297 RIGALYGVMVDTSHKEGGAQGGNVGAYYDLSKRTTLYGFANYMKNQANAGWRFSGSAGPG 356 R+ A G D+S ++ A +VGA+Y SKRT +YG + N+ A + + G Sbjct: 269 RLAAGVGYAQDSSGQDNNAGEVSVGAFYSFSKRTLVYGTFERLVNRHGATYALIAN---G 325 Query: 357 SNLAGADINGKSLVGLQMGILHRF 380 G+ + G Q+GILH F Sbjct: 326 PITPNTPTRGEGVTGAQLGILHSF 349 >ref|YP_552978.1| OmpC family outer membrane porin [Burkholderia xenovorans LB400] gb|ABE33628.1| outer membrane porin, OmpC family [Burkholderia xenovorans LB400] Length = 349 Score = 152 bits (385), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 126/384 (32%), Positives = 176/384 (45%), Gaps = 47/384 (12%) Query: 7 RTPVAMGLLLAASGSALAQSA-SNVTLYGTVDQYLGYMRSSSGKSLWALNDGAILRSRIG 65 + +A L A G+ A + VTLYG +D YLGY + + A+ G + SR+G Sbjct: 3 KMALACSAALVALGTVTVTPARAEVTLYGILDTYLGYTNAGGKGAQTAMQSGGLSASRVG 62 Query: 66 LKGYEDLGGGYATTFTLENGFSADTGAQADGARLFDRQSWVGIKTPAAGEFRIGRQNSVP 125 ++G EDLGGG TF LENG ++GA D F R +WVG+ TP GEFR GRQNSV Sbjct: 63 IRGSEDLGGGLRATFDLENGILTNSGAATDSTLAFSRSAWVGLGTP-YGEFRFGRQNSVL 121 Query: 126 FFIGGAIDYTERTTYGSII-NTFGVPSRFDNDLSWKSPRWAGLQIDLHYAMPETAGEGLG 184 + D TYGS + N R+DN +++ SP AG +AG LG Sbjct: 122 LLMHSKFDAFSGGTYGSFLHNASTFVFRYDNMITYWSPNIAGFTF--------SAGASLG 173 Query: 185 RR-------GVYQLGIDYINGPYRAGYAGLMAKPN-AGGLYDNAVQYHNVYLNYDYGPGK 236 + Y IDY GP G + A+ N A G + + +Y +G Sbjct: 174 GQTSPHDALNAYVGSIDYQRGPLYLGVS--HAEQNGANGKINTKTTFAGG--SYQFGSLT 229 Query: 237 VYLAYVRSNNTTANANGNNAATILNNVSNPNNFFAGNDANVQRFYNVYQISADYRLTPQL 296 Y Y R NN +N I NV ++++VY +S Y +TP L Sbjct: 230 GYFGYYRGNNLGSN--------ISTNVEG-------------KYHSVYSLSTTYSVTPAL 268 Query: 297 RIGALYGVMVDTSHKEGGAQGGNVGAYYDLSKRTTLYGFANYMKNQANAGWRFSGSAGPG 356 R+ A G D+S + A +VGA+Y SKRT +YG + N+ A + + G Sbjct: 269 RLAAGVGYAQDSSGQHNNAGEVSVGAFYSFSKRTLVYGTLERLVNRHGATYALIAN---G 325 Query: 357 SNLAGADINGKSLVGLQMGILHRF 380 G+ + G Q+GILH F Sbjct: 326 PITPNTPTRGEGVTGAQLGILHSF 349 >ref|YP_368624.1| outer membrane protein, (porin) [Burkholderia sp. 383] gb|ABB07980.1| outer membrane protein, (porin) [Burkholderia sp. 383] Length = 356 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 125/384 (32%), Positives = 178/384 (46%), Gaps = 47/384 (12%) Query: 1 MTKPSIRTPVAMGLLLAASGSALAQSASNVTLYGTVDQYLGYMRSSSGKSLWALNDGAIL 60 M +R VA+ + A G+A AQ VTLYG +D++ Y+ + +G + A+N G Sbjct: 16 MAHAGLRVTVAVACV-AGPGAAFAQDG--VTLYGVIDEFAQYVNTGNGYTA-AINSGGQW 71 Query: 61 RSRIGLKGYEDLGGGYATTFTLENGFSADTGAQADGARLFDRQSWVGIKTPAAGEFRIGR 120 SR GLKG ED+GGG F LENGF+ + G+ A LF+RQ+WVGI G+ R GR Sbjct: 72 GSRFGLKGGEDIGGGQKIEFALENGFNPNDGSLASSGSLFNRQAWVGIAGQW-GKVRAGR 130 Query: 121 QNSVPFFIGGAIDYTERTTYGSIINTFGVPS-RFDNDLSWKSPRWAGLQIDLHYAMPETA 179 QNS F G D T S ++ V + R N LS++SP AG Q L++ Sbjct: 131 QNSPLFNDQGGQDAFGGVTQASGMDNLTVFAFRTSNTLSYQSPEIAGFQGGLYFGF---- 186 Query: 180 GEGLGRRGV---YQLGIDYINGPYRAGYAGLMAKPNAGGLYDNAVQYHNVYLNYDYGPGK 236 G+ G R Q + Y +GP+ A AG K D + +Y+ G Sbjct: 187 GDAGGVRSAGSSQQFDLTYEHGPFGAFVAGQWLKNATATTTDRTIM---AGASYEIGKAT 243 Query: 237 VYLAYVRSNNTTANANGNNAATILNNVSNPNNFFAGNDANVQRFYNVYQISADYRLTPQL 296 VY F A A++ VY +S Y+ P Sbjct: 244 VY----------------------------GGFSAVKWADLGIDSRVYGLSVKYQFNPAN 275 Query: 297 RIGALYGVMVDTSHKEGGAQGGNVGAYYDLSKRTTLYGFANYMKNQANAGWRFSGSAGPG 356 + Y + D S + A + YDLSKRT+ YG +Y++N+ AG+ +G+A PG Sbjct: 276 YVALGYAYLHDQSSQGNHADQLGLMYEYDLSKRTSFYGALSYLRNRNQAGYTLAGAANPG 335 Query: 357 SNLAGADINGKSLVGLQMGILHRF 380 LA N + G+Q+GI+HRF Sbjct: 336 LPLAYPGANAR---GVQLGIVHRF 356