BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0036.0014.p (331 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777173.1| transcription regulator protein [Herbaspiril... 617 e-175 ref|ZP_07674162.1| transcriptional regulator DarR [Ralstonia sp.... 365 5e-99 ref|YP_001893337.1| AraC family transcriptional regulator [Ralst... 362 4e-98 ref|YP_004499763.1| AraC family transcriptional regulator [Serra... 360 2e-97 ref|ZP_06189121.1| putative AraC subfamily transcriptional regul... 357 1e-96 ref|ZP_01463683.1| transcriptional regulator, AraC family [Stigm... 347 2e-93 gb|EGP44426.1| transcriptional regulator, AraC family protein [A... 338 5e-91 ref|YP_002753790.1| transcriptional regulator, AraC family [Acid... 325 7e-87 ref|YP_002360472.1| AraC family transcriptional regulator [Methy... 323 2e-86 ref|YP_001239274.1| transcriptional regulator [Bradyrhizobium sp... 322 5e-86 >ref|YP_003777173.1| transcription regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ65265.1| transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 330 Score = 617 bits (1591), Expect = e-175, Method: Compositional matrix adjust. Identities = 322/331 (97%), Positives = 323/331 (97%), Gaps = 1/331 (0%) Query: 1 MPLRETAFLIFADCSMLDFTGPLSAFDAANRLAGKTLYRLTLYSEPGGMIRSSAGALIHT 60 MPLRETAFLIFADCSMLDFTGPLSAFDAANRLAGKTLYRLTLYSEPGGMIRSSAGALIHT Sbjct: 1 MPLRETAFLIFADCSMLDFTGPLSAFDAANRLAGKTLYRLTLYSEPGGMIRSSAGALIHT 60 Query: 61 ERIGRTSFDTLIVAGGGAPREGLVSPALTTTPPPAGAPRTRRIAGICTGAFVLAATGLLD 120 ERIGRTSFDTLIVAGGGAPREGLVSPAL A A R+RRIAGICTGAFVLAATGLLD Sbjct: 61 ERIGRTSFDTLIVAGGGAPREGLVSPALRRHVLRA-AARSRRIAGICTGAFVLAATGLLD 119 Query: 121 GKRATTHWRMAAKLQQMHPAVKVDSDRIYSRDGAVWTSAGISAGIDLALALIEDDHGVEL 180 GKRATTHWRMAAKLQQMHPAVKVDSDRIYSRDGAVWTSAGISAGIDLALALIEDDHGVEL Sbjct: 120 GKRATTHWRMAAKLQQMHPAVKVDSDRIYSRDGAVWTSAGISAGIDLALALIEDDHGVEL 179 Query: 181 ARSVARELVVYHRRPGGQSQFSALQEMDGGSERIRRALGFAREHLHQALTVDLLAEVACL 240 ARSVARELVVYHRRPGGQSQFSALQEMDGGSERIRRALGFAREHLHQALTVDLLAEVACL Sbjct: 180 ARSVARELVVYHRRPGGQSQFSALQEMDGGSERIRRALGFAREHLHQALTVDLLAEVACL 239 Query: 241 SRRQFDRAFAAETGQTPARAIEQMRAEAARLRIEQSQDTLESIARATGFGDADRMRRACL 300 SRRQFDRAFAAETGQTPARAIEQMRAEAARLRIEQSQDTLESIARATGFGDADRMRRACL Sbjct: 240 SRRQFDRAFAAETGQTPARAIEQMRAEAARLRIEQSQDTLESIARATGFGDADRMRRACL 299 Query: 301 RLFGQPPQAMRRLARAEDDQDRLSAPSGVHA 331 RLFGQPPQAMRRLARAEDDQDRLSAPSGVHA Sbjct: 300 RLFGQPPQAMRRLARAEDDQDRLSAPSGVHA 330 >ref|ZP_07674162.1| transcriptional regulator DarR [Ralstonia sp. 5_7_47FAA] gb|EFP67593.1| transcriptional regulator DarR [Ralstonia sp. 5_7_47FAA] Length = 320 Score = 365 bits (937), Expect = 5e-99, Method: Compositional matrix adjust. Identities = 195/314 (62%), Positives = 243/314 (77%), Gaps = 1/314 (0%) Query: 3 LRETAFLIFADCSMLDFTGPLSAFDAANRLAGKTLYRLTLYSEPGGMIRSSAGALIHTER 62 +R FL+F CS+LDFTGPL+AFD ANRLA + YR+ + SE G ++S+ G ++ T+ Sbjct: 1 MRRIGFLVFPGCSLLDFTGPLTAFDVANRLAAQPAYRIDVLSEGGAQVQSAPGLVMQTQG 60 Query: 63 IGRTSFDTLIVAGGGAPREGLVSPALTTTPPPAGAPRTRRIAGICTGAFVLAATGLLDGK 122 + +FDTL+++GG PRE SP L A A +RR+ +C+GAF LAA GLLDG+ Sbjct: 61 LDDPAFDTLVISGGNGPREDAFSPRLIAFVREAAA-HSRRMTSVCSGAFALAAAGLLDGR 119 Query: 123 RATTHWRMAAKLQQMHPAVKVDSDRIYSRDGAVWTSAGISAGIDLALALIEDDHGVELAR 182 RATTHWRMAA LQ+ +P V+V SD I+ DG VWTSAGIS+GIDLALALIE+D GV+++R Sbjct: 120 RATTHWRMAALLQRRYPRVQVQSDHIFIHDGPVWTSAGISSGIDLALALIEEDLGVDVSR 179 Query: 183 SVARELVVYHRRPGGQSQFSALQEMDGGSERIRRALGFAREHLHQALTVDLLAEVACLSR 242 +VARELVVYHRRPGGQSQFS L E+D S RI RALG+AREHLH+AL VD LAEVA LSR Sbjct: 180 AVARELVVYHRRPGGQSQFSTLLELDPASSRIARALGYAREHLHEALDVDRLAEVAHLSR 239 Query: 243 RQFDRAFAAETGQTPARAIEQMRAEAARLRIEQSQDTLESIARATGFGDADRMRRACLRL 302 RQFDRAF AETGQTPA+AIE++RAE AR R+E ++LE IARA GF D +RMRRA +R+ Sbjct: 240 RQFDRAFVAETGQTPAKAIEKLRAEIARPRVEAGDESLEHIARAVGFADPERMRRAFIRV 299 Query: 303 FGQPPQAMRRLARA 316 FGQPPQ++RR R+ Sbjct: 300 FGQPPQSVRRSGRS 313 >ref|YP_001893337.1| AraC family transcriptional regulator [Ralstonia pickettii 12J] ref|YP_002983680.1| AraC family transcriptional regulator [Ralstonia pickettii 12D] gb|ACD29910.1| transcriptional regulator, AraC family [Ralstonia pickettii 12J] gb|ACS65008.1| transcriptional regulator, AraC family [Ralstonia pickettii 12D] Length = 320 Score = 362 bits (930), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 192/313 (61%), Positives = 242/313 (77%), Gaps = 1/313 (0%) Query: 3 LRETAFLIFADCSMLDFTGPLSAFDAANRLAGKTLYRLTLYSEPGGMIRSSAGALIHTER 62 +R FL+F CS+LDFTGPL+AFD ANRLA YR+ + SE G ++S+ G ++ T+ Sbjct: 1 MRRIGFLVFPGCSLLDFTGPLTAFDVANRLAAHPAYRIEVLSEAGAQVQSAPGLVMQTQA 60 Query: 63 IGRTSFDTLIVAGGGAPREGLVSPALTTTPPPAGAPRTRRIAGICTGAFVLAATGLLDGK 122 + +FDTL+++GG PR+ SP L A A +RR+ +C+GAF LAA GLLDG+ Sbjct: 61 LDDPAFDTLVISGGNGPRDDAFSPGLIAFVREA-AQHSRRMTSVCSGAFALAAAGLLDGR 119 Query: 123 RATTHWRMAAKLQQMHPAVKVDSDRIYSRDGAVWTSAGISAGIDLALALIEDDHGVELAR 182 RATTHWRMAA+LQ+ +P V V +DRI+ +DG VWTSAGIS+GIDLALALIE D G++++R Sbjct: 120 RATTHWRMAAQLQRRYPRVHVQADRIFIQDGPVWTSAGISSGIDLALALIEADLGIDVSR 179 Query: 183 SVARELVVYHRRPGGQSQFSALQEMDGGSERIRRALGFAREHLHQALTVDLLAEVACLSR 242 +VARELVVYHRRPGGQSQFSAL E+D S RI RAL +AR+HLH+AL VD LAEVA LSR Sbjct: 180 AVARELVVYHRRPGGQSQFSALLELDPASTRIARALSYARDHLHEALDVDRLAEVAHLSR 239 Query: 243 RQFDRAFAAETGQTPARAIEQMRAEAARLRIEQSQDTLESIARATGFGDADRMRRACLRL 302 RQFDRAF AETGQTPA+AIE++RAEAAR R+E ++LE IARA GF D +RMRRA +R+ Sbjct: 240 RQFDRAFVAETGQTPAKAIEKLRAEAARPRVEAGNESLEHIARAVGFADPERMRRAFIRV 299 Query: 303 FGQPPQAMRRLAR 315 FG PPQ++RR R Sbjct: 300 FGHPPQSVRRSGR 312 >ref|YP_004499763.1| AraC family transcriptional regulator [Serratia sp. AS12] ref|YP_004504715.1| AraC family transcriptional regulator [Serratia sp. AS9] gb|AEF44454.1| transcriptional regulator, AraC family [Serratia sp. AS9] gb|AEF49406.1| transcriptional regulator, AraC family [Serratia sp. AS12] gb|AEG27113.1| transcriptional regulator, AraC family [Serratia sp. AS13] Length = 314 Score = 360 bits (924), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 183/314 (58%), Positives = 233/314 (74%), Gaps = 1/314 (0%) Query: 3 LRETAFLIFADCSMLDFTGPLSAFDAANRLAGKTLYRLTLYSEPGGMIRSSAGALIHTER 62 ++ F+IF D ++LDF GPL+AFD A++ YR S+ GGM+ S+G + T+ Sbjct: 1 MKNIGFVIFPDFNLLDFAGPLAAFDQADQFTDAPAYRCLPVSQAGGMVIGSSGVAVMTQP 60 Query: 63 IGRTSFDTLIVAGGGAPREGLVSPALTTTPPPAGAPRTRRIAGICTGAFVLAATGLLDGK 122 + + FDTL++AGG SPAL + + RR+A +CTGAF+LAA GLL+GK Sbjct: 61 LEDSRFDTLLIAGGRGNVAAAESPALIAMLQQQ-SRQVRRMASVCTGAFILAAAGLLEGK 119 Query: 123 RATTHWRMAAKLQQMHPAVKVDSDRIYSRDGAVWTSAGISAGIDLALALIEDDHGVELAR 182 RATTHW AA+LQQ +P ++VDS+RI+ RDGA+WTSAGISAGIDLALA+IE+D G E+A Sbjct: 120 RATTHWFHAARLQQRYPRIRVDSNRIFIRDGALWTSAGISAGIDLALAMIEEDLGAEVAA 179 Query: 183 SVARELVVYHRRPGGQSQFSALQEMDGGSERIRRALGFAREHLHQALTVDLLAEVACLSR 242 +VAR+LVVYHRRPGGQSQ+S L ++ S+RIR AL +AREHLHQ LTV LA+ ACLS Sbjct: 180 NVARQLVVYHRRPGGQSQYSLLLALNPSSDRIRSALSYAREHLHQPLTVADLADAACLSE 239 Query: 243 RQFDRAFAAETGQTPARAIEQMRAEAARLRIEQSQDTLESIARATGFGDADRMRRACLRL 302 RQF R F AETGQTPA+ IEQ+R EAAR+RIE+S + LE IARA GF D +RMRRA +R+ Sbjct: 240 RQFGRLFRAETGQTPAKVIEQLRVEAARVRIEESGEALEVIARAVGFSDPERMRRAFIRV 299 Query: 303 FGQPPQAMRRLARA 316 FG PQAMRRL+RA Sbjct: 300 FGLSPQAMRRLSRA 313 >ref|ZP_06189121.1| putative AraC subfamily transcriptional regulator [Serratia odorifera 4Rx13] gb|EFA17423.1| putative AraC subfamily transcriptional regulator [Serratia odorifera 4Rx13] Length = 314 Score = 357 bits (917), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 182/314 (57%), Positives = 232/314 (73%), Gaps = 1/314 (0%) Query: 3 LRETAFLIFADCSMLDFTGPLSAFDAANRLAGKTLYRLTLYSEPGGMIRSSAGALIHTER 62 ++ F+IF D ++LDF GPL+AF+ A+R A YR S+ GGM+ S+G + T+ Sbjct: 1 MKNIGFVIFPDFNLLDFAGPLAAFEQADRFADAPAYRCLPVSQAGGMVIGSSGVAVMTQP 60 Query: 63 IGRTSFDTLIVAGGGAPREGLVSPALTTTPPPAGAPRTRRIAGICTGAFVLAATGLLDGK 122 + + FDTL++AGG SPAL + + RR+A +CTGAF+LAA GLL+GK Sbjct: 61 LDDSRFDTLLIAGGRGNVAAAESPALIAMLQQQ-SRQVRRMASVCTGAFILAAAGLLEGK 119 Query: 123 RATTHWRMAAKLQQMHPAVKVDSDRIYSRDGAVWTSAGISAGIDLALALIEDDHGVELAR 182 RATTHW AA+LQQ +P ++VDS+RI+ RDGA WTSAGISAGIDLALA+IE+D G E A Sbjct: 120 RATTHWFHAARLQQRYPRIRVDSNRIFIRDGAFWTSAGISAGIDLALAMIEEDLGAEAAA 179 Query: 183 SVARELVVYHRRPGGQSQFSALQEMDGGSERIRRALGFAREHLHQALTVDLLAEVACLSR 242 +VAR+LVVYHRRPGGQSQ+S L ++ S+RIR AL +AREHLHQ L V LA+ ACLS Sbjct: 180 NVARQLVVYHRRPGGQSQYSLLLALNPSSDRIRSALSYAREHLHQPLRVTDLADAACLSE 239 Query: 243 RQFDRAFAAETGQTPARAIEQMRAEAARLRIEQSQDTLESIARATGFGDADRMRRACLRL 302 RQF R F +ETGQTPA+ IEQ+R EAAR+RIE+S + LE+IARA GF D +RMRRA +R+ Sbjct: 240 RQFGRLFRSETGQTPAKVIEQLRVEAARVRIEESGEALEAIARAVGFSDPERMRRAFIRV 299 Query: 303 FGQPPQAMRRLARA 316 FG PQAMRRL+RA Sbjct: 300 FGLSPQAMRRLSRA 313 >ref|ZP_01463683.1| transcriptional regulator, AraC family [Stigmatella aurantiaca DW4/3-1] ref|YP_003955599.1| AraC family transcriptional regulator [Stigmatella aurantiaca DW4/3-1] gb|EAU65578.1| transcriptional regulator, AraC family [Stigmatella aurantiaca DW4/3-1] gb|ADO73772.1| Transcriptional regulator, AraC family [Stigmatella aurantiaca DW4/3-1] Length = 332 Score = 347 bits (889), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 173/306 (56%), Positives = 226/306 (73%), Gaps = 1/306 (0%) Query: 3 LRETAFLIFADCSMLDFTGPLSAFDAANRLAGKTLYRLTLYSEPGGMIRSSAGALIHTER 62 +R+ L F + +LD TGP S F+ YRL SE GGM++SS+G I T+ Sbjct: 19 VRDIGLLAFPEFQILDLTGPASVFEGPGIFEKPAAYRLHPLSEHGGMLKSSSGVEILTQP 78 Query: 63 IGRTSFDTLIVAGGGAPREGLVSPALTTTPPPAGAPRTRRIAGICTGAFVLAATGLLDGK 122 + RT+FDTL+V GG + SPAL A A +RR+A +CTGAF+LAA GLLDG+ Sbjct: 79 LERTAFDTLLVVGGAGTLVAMESPALLQFVK-AAATASRRVASVCTGAFILAAAGLLDGR 137 Query: 123 RATTHWRMAAKLQQMHPAVKVDSDRIYSRDGAVWTSAGISAGIDLALALIEDDHGVELAR 182 RATTHWR AA LQ++ P V+V+++RI+ +DG++WTSAG S GIDL+LAL+E+D G++ +R Sbjct: 138 RATTHWRQAALLQRLFPKVRVEAERIFIQDGSLWTSAGASTGIDLSLALLEEDLGLDASR 197 Query: 183 SVARELVVYHRRPGGQSQFSALQEMDGGSERIRRALGFAREHLHQALTVDLLAEVACLSR 242 + AR+LVVYHRRPGGQSQFS L +++ S+RIR AL FAREHLH+ LTV+ LA+ ACLS Sbjct: 198 ATARDLVVYHRRPGGQSQFSTLLDLEPASDRIRLALAFAREHLHEPLTVERLAQAACLSP 257 Query: 243 RQFDRAFAAETGQTPARAIEQMRAEAARLRIEQSQDTLESIARATGFGDADRMRRACLRL 302 RQF R F AETGQTPA+A+E++RAE AR+RIE S + +E IA+ GF D +RMRRAC+RL Sbjct: 258 RQFGREFLAETGQTPAKAVERLRAETARMRIETSTEPIERIAQEVGFSDPERMRRACIRL 317 Query: 303 FGQPPQ 308 FGQPPQ Sbjct: 318 FGQPPQ 323 >gb|EGP44426.1| transcriptional regulator, AraC family protein [Achromobacter xylosoxidans AXX-A] Length = 332 Score = 338 bits (868), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 171/314 (54%), Positives = 227/314 (72%), Gaps = 5/314 (1%) Query: 4 RETAFLIFADCSMLDFTGPLSAFDAANRLAGKTLYRLTLYSEPGGMIRSSAGALIHTERI 63 R+ AFL+F D + D TGPL+AF+ A L G YR + S GG +RSSAG + T+R Sbjct: 13 RDIAFLVFHDFQIQDLTGPLAAFEVAGGLLGDHSYRYQVISLAGGPVRSSAGLEVTTQRA 72 Query: 64 GRTSFDTLIVAGGG---APREGLVSPALTTTPPPAGAPRTRRIAGICTGAFVLAATGLLD 120 G +++DT+IVAG G P L P A RRIA +CTGAF+LAA+GLLD Sbjct: 73 GFSAYDTVIVAGAGLGAYPDAAL--PETCDYLNHVVAKGARRIASVCTGAFILAASGLLD 130 Query: 121 GKRATTHWRMAAKLQQMHPAVKVDSDRIYSRDGAVWTSAGISAGIDLALALIEDDHGVEL 180 G ATTHW+ AA+LQ+ +P VKVD DRI++R+G +WTSAG++ GID+ALA+IE+DHG L Sbjct: 131 GLCATTHWKYAARLQREYPRVKVDGDRIFTREGGIWTSAGVTTGIDMALAMIEEDHGAGL 190 Query: 181 ARSVARELVVYHRRPGGQSQFSALQEMDGGSERIRRALGFAREHLHQALTVDLLAEVACL 240 + +VA+ LVVYHRRPGGQSQFSA+ +M+ S+RIR L + REHLH++L+ +LLA VACL Sbjct: 191 SHAVAQMLVVYHRRPGGQSQFSAIADMEPESDRIRNVLTYIREHLHESLSTELLASVACL 250 Query: 241 SRRQFDRAFAAETGQTPARAIEQMRAEAARLRIEQSQDTLESIARATGFGDADRMRRACL 300 S RQF RAF AETG+TPA+A+E++R E AR R+E+ + +E IA GF D +RMRRA + Sbjct: 251 SPRQFGRAFLAETGETPAKAVERLRVEVARQRVERGAEPIEIIAHRIGFTDPERMRRAFI 310 Query: 301 RLFGQPPQAMRRLA 314 R+ G PPQ++RR+A Sbjct: 311 RVLGHPPQSIRRMA 324 >ref|YP_002753790.1| transcriptional regulator, AraC family [Acidobacterium capsulatum ATCC 51196] gb|ACO34357.1| transcriptional regulator, AraC family [Acidobacterium capsulatum ATCC 51196] Length = 320 Score = 325 bits (833), Expect = 7e-87, Method: Compositional matrix adjust. Identities = 162/312 (51%), Positives = 221/312 (70%), Gaps = 3/312 (0%) Query: 4 RETAFLIFADCSMLDFTGPLSAFDAANRLAGKTLYRLTLYSEPGGMIRSSAGALIHTERI 63 R F ++ MLD +GPL F+ AN LAG+ LY++ ++S GG++R+S G I T RI Sbjct: 3 RRIGFFVYPGHQMLDLSGPLCVFEDANLLAGEELYQIHIFSAEGGVVRNSVGLGIDTLRI 62 Query: 64 GRTSFDTLIVAGGGAPREGLVSPALTTTPPPAGAPRTRRIAGICTGAFVLAATGLLDGKR 123 GR DTLIV GG P E P + + A + RRIA +CTGAF+LA GLL GKR Sbjct: 63 GRRKLDTLIVVGGKLPNE--FDPFILRSLL-AQSKLARRIASVCTGAFLLAQAGLLRGKR 119 Query: 124 ATTHWRMAAKLQQMHPAVKVDSDRIYSRDGAVWTSAGISAGIDLALALIEDDHGVELARS 183 ATTHWR A L++ P KV+ D I+ +DG WTSAGI+AG+DLALALI++DHG+ L+++ Sbjct: 120 ATTHWRYAHLLEKEFPQTKVNGDAIFVKDGNTWTSAGIAAGMDLALALIQEDHGISLSKA 179 Query: 184 VARELVVYHRRPGGQSQFSALQEMDGGSERIRRALGFAREHLHQALTVDLLAEVACLSRR 243 VA++LV+YHRRPGGQ+QFSAL +M +ER+++ +G RE+L +L+++ LA VA LS R Sbjct: 180 VAQDLVIYHRRPGGQTQFSALADMSPATERMQQIIGHIRENLSNSLSMEELAGVAHLSVR 239 Query: 244 QFDRAFAAETGQTPARAIEQMRAEAARLRIEQSQDTLESIARATGFGDADRMRRACLRLF 303 QF R F AETG+TP++A+E++RAE A +EQ+ + +E IA GF D +RMRRA LR++ Sbjct: 240 QFGRIFKAETGETPSKAVERIRAEVAHSLVEQTSEPVEMIAEQVGFSDPERMRRAFLRIY 299 Query: 304 GQPPQAMRRLAR 315 G PPQA+RR AR Sbjct: 300 GHPPQAVRRNAR 311 >ref|YP_002360472.1| AraC family transcriptional regulator [Methylocella silvestris BL2] gb|ACK49110.1| transcriptional regulator, AraC family [Methylocella silvestris BL2] Length = 314 Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 177/318 (55%), Positives = 221/318 (69%), Gaps = 10/318 (3%) Query: 3 LRETAFLIFADCSMLDFTGPLSAFDAANRLAGKTLYRLTLYSEPGGMIRSSAGALIHTER 62 ++ F IF SM+ +S F+ AN LA K++Y + L SE GG+++SS G I TE Sbjct: 1 MQRVGFTIFPGYSMMGL-AVVSVFELANMLAEKSVYDVRLLSESGGLVQSSVGMRIETEA 59 Query: 63 IGRTSFDTLIVAGG---GAPREGLVSPALTTTPPPAGAPRTRRIAGICTGAFVLAATGLL 119 +DTLI+ GG P GL + L TP R RR A ICTGAFVLA GLL Sbjct: 60 FDAGDYDTLIIGGGTEIAPPSPGLTA-FLRQTPG-----RRRRTASICTGAFVLAEAGLL 113 Query: 120 DGKRATTHWRMAAKLQQMHPAVKVDSDRIYSRDGAVWTSAGISAGIDLALALIEDDHGVE 179 DG+RATTHW A +LQ + P VKVD DRI+ DG ++TSAG++AGIDLALAL+E+D G+E Sbjct: 114 DGRRATTHWFHARQLQALFPKVKVDEDRIFVVDGPIYTSAGMTAGIDLALALVEEDLGLE 173 Query: 180 LARSVARELVVYHRRPGGQSQFSALQEMDGGSERIRRALGFAREHLHQALTVDLLAEVAC 239 +ARSVAR+LVVYHRR GGQSQFSAL E++ S+RI+ AL +A+ +LH LTV+ LAE A Sbjct: 174 IARSVARKLVVYHRRAGGQSQFSALLELEPKSDRIQSALAYAKRNLHMRLTVEQLAEAAH 233 Query: 240 LSRRQFDRAFAAETGQTPARAIEQMRAEAARLRIEQSQDTLESIARATGFGDADRMRRAC 299 LS RQF RAF AETGQ+PA+A+E +R E AR+ +EQ ++SIAR TGF D D MRRA Sbjct: 234 LSPRQFSRAFHAETGQSPAKAVEHLRIEEARMMMEQGTRPIDSIARDTGFSDRDHMRRAF 293 Query: 300 LRLFGQPPQAMRRLARAE 317 LR FGQPPQ +RR AR E Sbjct: 294 LRAFGQPPQVIRRNARGE 311 >ref|YP_001239274.1| transcriptional regulator [Bradyrhizobium sp. BTAi1] gb|ABQ35368.1| transcriptional regulator, AraC family with amidase-like domain [Bradyrhizobium sp. BTAi1] Length = 322 Score = 322 bits (826), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 170/292 (58%), Positives = 216/292 (73%), Gaps = 4/292 (1%) Query: 24 SAFDAANRLAGKTLYRLTLYSEPGGMIRSSAGALIHTERIGRTSFDTLIVAGGGAPREGL 83 SAF+ AN +G+ LYR+++ SE GG IRS+ G I TE +G DTL+V G PR Sbjct: 21 SAFEFANIQSGEKLYRVSVMSEKGGPIRSTLGVRIDTEPLGDFP-DTLMVVGELRPRPS- 78 Query: 84 VSPALTTTPPPAGAPRTRRIAGICTGAFVLAATGLLDGKRATTHWRMAAKLQQMHPAVKV 143 SP L AG + RR+AG+CTGAF+LA GLLDG+ ATTHW A+ LQQ +PAV+V Sbjct: 79 -SPGLRAYIAEAGQ-KCRRVAGVCTGAFLLAEAGLLDGRSATTHWAYASDLQQRYPAVRV 136 Query: 144 DSDRIYSRDGAVWTSAGISAGIDLALALIEDDHGVELARSVARELVVYHRRPGGQSQFSA 203 D DRI+ DG VWTSAG++A IDLALALIE+DHG EL+R+VAR LVVYHRRPGGQSQFSA Sbjct: 137 DDDRIFVSDGNVWTSAGMTAAIDLALALIEEDHGAELSRAVARRLVVYHRRPGGQSQFSA 196 Query: 204 LQEMDGGSERIRRALGFAREHLHQALTVDLLAEVACLSRRQFDRAFAAETGQTPARAIEQ 263 L +++ S+R+RRAL +A+E+L AL V+ LAE A LS RQF R F ETGQ+PA+A+E+ Sbjct: 197 LLDLEPRSDRVRRALTYAKENLRNALNVEELAEAASLSPRQFSRIFRDETGQSPAKAVER 256 Query: 264 MRAEAARLRIEQSQDTLESIARATGFGDADRMRRACLRLFGQPPQAMRRLAR 315 +R EAA+ +E+ + +L+ +AR TGF D DRMRRA LR FGQPPQ++RR R Sbjct: 257 LRLEAAKAMLEEGRHSLDVVARDTGFADRDRMRRAFLRFFGQPPQSLRRSLR 308