BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0036.0003.p (255 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777187.1| NlpD lipoprotein [Herbaspirillum seropedicae... 429 e-118 ref|YP_001099558.1| lipoprotein precursor [Herminiimonas arsenic... 220 2e-55 ref|YP_004752563.1| lipoprotein [Collimonas fungivorans Ter331] ... 210 2e-52 ref|YP_004752511.1| lipoprotein [Collimonas fungivorans Ter331] ... 204 9e-51 ref|YP_001353825.1| lipoprotein nlpD precursor [Janthinobacteriu... 200 2e-49 gb|EGW60452.1| Peptidase M23 [Dechlorosoma suillum PS] 198 7e-49 ref|ZP_08405064.1| peptidase M23 [Hylemonella gracilis ATCC 1962... 184 1e-44 ref|YP_982801.1| peptidase M23B [Polaromonas naphthalenivorans C... 181 8e-44 ref|YP_001807935.1| peptidase M23 [Burkholderia ambifaria MC40-6... 180 2e-43 emb|CBA26525.1| Lipoprotein nlpD/lppB homolog [Curvibacter putat... 178 6e-43 >ref|YP_003777187.1| NlpD lipoprotein [Herbaspirillum seropedicae SmR1] gb|ADJ65279.1| NlpD lipoprotein [Herbaspirillum seropedicae SmR1] Length = 254 Score = 429 bits (1103), Expect = e-118, Method: Compositional matrix adjust. Identities = 246/255 (96%), Positives = 246/255 (96%), Gaps = 1/255 (0%) Query: 1 MGQFHRTTALAAALPLALVLLLAGCASTADSDGYYTVKRGDTLYSIGRDFDQSPANLRTW 60 MGQFHRTTALAA LALVLLLAGCASTADSDGYYTVKRGDTLYSIGRDFDQSPANLRTW Sbjct: 1 MGQFHRTTALAALP-LALVLLLAGCASTADSDGYYTVKRGDTLYSIGRDFDQSPANLRTW 59 Query: 61 NRLRNPDDLEVGQRILVRPPVGVVARTGAGQSPRPAASSSPSASGSGSRKPASSPPAAKP 120 NRLRNPDDLEVGQRILVRPPVGVVARTGAGQSPRPAASSSPSASGSGSRKPA S P AKP Sbjct: 60 NRLRNPDDLEVGQRILVRPPVGVVARTGAGQSPRPAASSSPSASGSGSRKPAPSRPTAKP 119 Query: 121 AAKPQDDAGPGGAEAKVDWSWPTAGKSAPSADSYKKGIDIIGSEGQSVVAAAAGKVTYAG 180 AAKPQDD P GAEAKVDWSWPTAGKSAPSADSYKKGIDIIGSEGQSVVAAAAGKVTYAG Sbjct: 120 AAKPQDDDAPAGAEAKVDWSWPTAGKSAPSADSYKKGIDIIGSEGQSVVAAAAGKVTYAG 179 Query: 181 HGIRGYGNMVIIKHTPQLLSVYAHNKTILVKEGQTVTRGQQIATMGNSDTNKVKLYFEIR 240 HGIRGYGNMVIIKHTPQLLSVYAHNKTILVKEGQTVTRGQQIATMGNSDTNKVKLYFEIR Sbjct: 180 HGIRGYGNMVIIKHTPQLLSVYAHNKTILVKEGQTVTRGQQIATMGNSDTNKVKLYFEIR 239 Query: 241 RNGKPINVMAVLPAR 255 RNGKPINVMAVLPAR Sbjct: 240 RNGKPINVMAVLPAR 254 >ref|YP_001099558.1| lipoprotein precursor [Herminiimonas arsenicoxydans] emb|CAL61431.1| putative Peptidase M23B [Herminiimonas arsenicoxydans] Length = 304 Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 127/266 (47%), Positives = 161/266 (60%), Gaps = 39/266 (14%) Query: 27 STADSDGYYTVKRGDTLYSIGRDFDQSPANLRTWNRLRNPDDLEVGQRILVRPPVGVVAR 86 +TAD +YTVK+GDTLY I DF QS + L TWN+L NP+D++V Q + V PP AR Sbjct: 41 NTADDRNFYTVKKGDTLYRIALDFGQSYSELVTWNKLANPNDIKVDQVLRVAPPDAPAAR 100 Query: 87 ----------TGAGQSPRPAASSSPSASGS-----GSRKPAS----------------SP 115 TG+G RP ++ + S +G+ G ++P S +P Sbjct: 101 SGGAQTGAVATGSGAEARPLSAPAASTAGNKTSPRGEKRPYSDSTLADMQKPEGAAVTTP 160 Query: 116 PAA-----KPAAKPQDDAGPGGAEAK-VDWSWPTAGKSAPSADSYKKGIDIIGSEGQSVV 169 P A KPA P A GAE + V W WP GK + D KKGIDI G GQ V+ Sbjct: 161 PKAVASSDKPAEIPA--AAATGAEYETVSWMWPAEGKLVATFDDNKKGIDIAGKSGQQVL 218 Query: 170 AAAAGKVTYAGHGIRGYGNMVIIKHTPQLLSVYAHNKTILVKEGQTVTRGQQIATMGNSD 229 AA AGKV YAG GIRGYGN+VI+KHT LLS YAHNK I VKEGQ+V++GQ+IA MG+SD Sbjct: 219 AAGAGKVMYAGSGIRGYGNLVIVKHTSTLLSAYAHNKIIHVKEGQSVSKGQKIADMGDSD 278 Query: 230 TNKVKLYFEIRRNGKPINVMAVLPAR 255 + VKL+FEIR+ GKP++ LP+R Sbjct: 279 ADSVKLHFEIRQQGKPVDPSKFLPSR 304 >ref|YP_004752563.1| lipoprotein [Collimonas fungivorans Ter331] gb|AEK61740.1| lipoprotein precursor [Collimonas fungivorans Ter331] Length = 324 Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 129/276 (46%), Positives = 162/276 (58%), Gaps = 53/276 (19%) Query: 29 ADSDGYYTVKRGDTLYSIGRDFDQSPANLRTWNRLRNPDDLEVGQRILVRPP-------- 80 A+ G YTVK+GDTLY I +F QS ++ WN+L N +D++VGQ + V+PP Sbjct: 53 AEGRGSYTVKQGDTLYRIALEFGQSYRDIVAWNKLDNANDIKVGQVLRVQPPDSGSGPGG 112 Query: 81 --VGVVARTGAGQSPRPAASSSPSASGS---------GSRKPASSPPAAKPAAKPQDDAG 129 +G VA TG+G R S+ +A+ + G ++P S A+ KP DAG Sbjct: 113 AQIGTVA-TGSGVEVRSLGSAPSAAAVASGGNKSGPRGDKRPYSDSALAE-LQKP--DAG 168 Query: 130 PG------------------------------GAEAKVDWSWPTAGKSAPSADSYKKGID 159 P G E KVDW WP GK + D KKGID Sbjct: 169 PSSETPKPAATPAVTAPAAAAASTASTAAPASGDEDKVDWMWPAEGKQVGAFDQGKKGID 228 Query: 160 IIGSEGQSVVAAAAGKVTYAGHGIRGYGNMVIIKHTPQLLSVYAHNKTILVKEGQTVTRG 219 I G GQ+VVAAA GKV YAG GIRGYGN+VIIKHT LLS YAHNKTILVKEGQTV++G Sbjct: 229 IAGKAGQNVVAAAGGKVMYAGSGIRGYGNLVIIKHTSNLLSAYAHNKTILVKEGQTVSKG 288 Query: 220 QQIATMGNSDTNKVKLYFEIRRNGKPINVMAVLPAR 255 Q+IA MGNSD++ VKL+FEIR+ GKP++ LP+R Sbjct: 289 QKIAEMGNSDSDAVKLHFEIRQQGKPVDPSKFLPSR 324 >ref|YP_004752511.1| lipoprotein [Collimonas fungivorans Ter331] gb|AEK61688.1| lipoprotein precursor [Collimonas fungivorans Ter331] Length = 250 Score = 204 bits (520), Expect = 9e-51, Method: Compositional matrix adjust. Identities = 112/223 (50%), Positives = 143/223 (64%), Gaps = 26/223 (11%) Query: 33 GYYTVKRGDTLYSIGRDFDQSPANLRTWNRLRNPDDLEVGQRILVRPPVGVVARTGAGQS 92 GYYTV++GDTL SI R F +S +++ WNRL +P+D++V Q + V P G A +G+ Sbjct: 54 GYYTVQKGDTLSSIARKFRRSNSDIIAWNRLSDPNDIKVDQVLRVLPQ-GAAATSGSTAK 112 Query: 93 PRPAASSSPSASGSGSRKPASSPPAAKPAAKPQDDAGPGGAEAKVDWSWPTAGKSAPSAD 152 PR S+ + PAA DA +DW+WP +G+S Sbjct: 113 PRSTDSADTA-----------------PAASDDKDA--------IDWAWPASGQSGSGLG 147 Query: 153 SYKKGIDIIGSEGQSVVAAAAGKVTYAGHGIRGYGNMVIIKHTPQLLSVYAHNKTILVKE 212 KKGIDI G GQ V+AAAAGKV Y+G GIRGYGN+VIIKH LLSVYAHNKTI+VKE Sbjct: 148 QGKKGIDIFGQLGQPVMAAAAGKVMYSGSGIRGYGNLVIIKHNSSLLSVYAHNKTIVVKE 207 Query: 213 GQTVTRGQQIATMGNSDTNKVKLYFEIRRNGKPINVMAVLPAR 255 GQ V++GQ+IA MG SD++ VKLYFEIRR GKP++ LP+R Sbjct: 208 GQMVSKGQKIAEMGKSDSSAVKLYFEIRRQGKPVDPSRYLPSR 250 >ref|YP_001353825.1| lipoprotein nlpD precursor [Janthinobacterium sp. Marseille] gb|ABR89363.1| lipoprotein nlpD precursor [Janthinobacterium sp. Marseille] Length = 317 Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 123/307 (40%), Positives = 162/307 (52%), Gaps = 68/307 (22%) Query: 16 LALVLLLAGCASTADS--------------------DGYYTVKRGDTLYSIGRDFDQSPA 55 ++LV LL+ C+ST +S YTV++GDTLY I DF QS + Sbjct: 12 ISLVGLLSACSSTQNSAPVSERRISGTTPPKAAVEDRTTYTVRKGDTLYRIALDFGQSYS 71 Query: 56 NLRTWNRLRNPDDLEVGQRILVRPPVGVVARTGAGQS----------PRP---------A 96 + WN L NP+D++VGQ + V PP VAR+G Q+ RP + Sbjct: 72 EIVAWNNLANPNDIKVGQVLRVAPPDAPVARSGGAQTGAIASSSVVESRPLGAPSSTTVS 131 Query: 97 ASSSPSASGSGSRKPASSPPAAKPAAKPQDDAGPGGA----------------------- 133 AS++ S G ++P S A+ KP A Sbjct: 132 ASATNKTSPRGEKRPYSDATLAE-MQKPDSTPVVAAAPAATPATATAAKPATPAEAAAPV 190 Query: 134 -----EAKVDWSWPTAGKSAPSADSYKKGIDIIGSEGQSVVAAAAGKVTYAGHGIRGYGN 188 + V W WP GK + D +KG+DI G GQ+V+AA AGKV YAG GIRGYGN Sbjct: 191 ALAADDDSVSWIWPAEGKVVGTFDDGRKGLDIAGKSGQAVLAAGAGKVMYAGSGIRGYGN 250 Query: 189 MVIIKHTPQLLSVYAHNKTILVKEGQTVTRGQQIATMGNSDTNKVKLYFEIRRNGKPINV 248 +VI+KHT LLS YAHNK ILVKEGQ V +GQ+IA MG+SD++ VKL+FEIR+ GKP++ Sbjct: 251 LVIVKHTSNLLSAYAHNKAILVKEGQNVNKGQKIAEMGDSDSDSVKLHFEIRQQGKPVDP 310 Query: 249 MAVLPAR 255 LP+R Sbjct: 311 SKFLPSR 317 >gb|EGW60452.1| Peptidase M23 [Dechlorosoma suillum PS] Length = 302 Score = 198 bits (503), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 126/290 (43%), Positives = 156/290 (53%), Gaps = 53/290 (18%) Query: 16 LALVLLLAGCAS---------------TADSDGYYTVKRGDTLYSIGRDFDQSPANLRTW 60 +A +L LAGCAS A S +YTVK+GDTLYSI D Q ++ W Sbjct: 16 IAALLFLAGCASHAPAPVVERGVPSKPAAASKDFYTVKKGDTLYSIALDNGQDYKDVAAW 75 Query: 61 NRLRNPDDLEVGQRILVRPPVGVVARTGAGQ--------------SPRPAASSSPSASGS 106 N L NP+ + VGQ++ V PP G A T + P PAA+S Sbjct: 76 NNLENPNRILVGQQLRVTPPDGGAAGTAVAKPIGGGVVESRSLDGGPVPAAASDTLKREP 135 Query: 107 GSRKPASSPPAAKPAAKPQDDAGPGGAEAK--------------------VDWSWPTAGK 146 + K A S A AK Q+ GA AK V W+WP GK Sbjct: 136 KAGKEAYSDQAW---AKAQNQNNAQGAAAKPAEPVRSEAPAAAAAPAAADVTWAWPAGGK 192 Query: 147 S-APSADSYKKGIDIIGSEGQSVVAAAAGKVTYAGHGIRGYGNMVIIKHTPQLLSVYAHN 205 S A ++ KG+DI G G+ V+AAA GKV Y+G G+RGYG +VIIKH LS YAHN Sbjct: 193 SIAGFNEATNKGVDIAGKLGEPVLAAADGKVVYSGSGLRGYGKLVIIKHDATFLSAYAHN 252 Query: 206 KTILVKEGQTVTRGQQIATMGNSDTNKVKLYFEIRRNGKPINVMAVLPAR 255 ILVKEGQ+VTRGQ+IA MGNSDT++VKL+FEIRR GKP++ LP R Sbjct: 253 NNILVKEGQSVTRGQKIAEMGNSDTDQVKLHFEIRRQGKPVDPTQYLPKR 302 >ref|ZP_08405064.1| peptidase M23 [Hylemonella gracilis ATCC 19624] gb|EGI77685.1| peptidase M23 [Hylemonella gracilis ATCC 19624] Length = 339 Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 106/235 (45%), Positives = 138/235 (58%), Gaps = 22/235 (9%) Query: 26 ASTADSDGYYTVKRGDTLYSIGRDFDQSPANLRTWNRLRNPDDLEVGQRILVRPPVGVVA 85 A AD GYYTVK+GD LY IG + Q +L WN L + + VGQ + V PP Sbjct: 122 AGGADKPGYYTVKQGDNLYRIGLETGQHWKDLARWNGLPDGHQIAVGQVLRVIPP----- 176 Query: 86 RTGAGQSPRPAASSSPSASGSGSRKPASSPP-AAKPAAKPQDDAGPGGAEAK---VDWSW 141 G++P+P K AS+PP A P ++P GG A + W W Sbjct: 177 ----GETPQP--------DDDAGDKAASAPPTAGTPTSRPVTSVVVGGDAASSGGLTWIW 224 Query: 142 PTAGKSAPSADSYK-KGIDIIGSEGQSVVAAAAGKVTYAGHGIRGYGNMVIIKHTPQLLS 200 P +G S D K KG+D+ G+ G+ V+AAA G+V YAG G+RGYGN++IIKH L+ Sbjct: 225 PVSGPVIASFDGLKNKGLDLGGAAGEPVLAAADGRVVYAGSGLRGYGNLIIIKHNNTYLT 284 Query: 201 VYAHNKTILVKEGQTVTRGQQIATMGNSDTNKVKLYFEIRRNGKPINVMAVLPAR 255 YAHN+ +LVKE Q V RGQ+IA MGNSD ++VKL+FE+RR GKP+N LP R Sbjct: 285 AYAHNRALLVKEDQAVKRGQKIAEMGNSDADRVKLHFEVRRQGKPVNPAQYLPKR 339 >ref|YP_982801.1| peptidase M23B [Polaromonas naphthalenivorans CJ2] gb|ABM37880.1| peptidase M23B [Polaromonas naphthalenivorans CJ2] Length = 301 Score = 181 bits (459), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 112/255 (43%), Positives = 147/255 (57%), Gaps = 15/255 (5%) Query: 6 RTTALAAALPLALVLLLAGCASTADSDGYYTVKRGDTLYSIGRDFDQSPANLRTWNRLRN 65 R T ++ P+ V LL G A A GYY+VKRGDT+ IG + Q+ ++ WN L Sbjct: 57 RGTGMSRPAPVDPVKLLPG-AENAGKPGYYSVKRGDTMIRIGLENGQNWRDIARWNNLET 115 Query: 66 PDDLEVGQRILVRPPVGVVARTGAGQSPRPA----ASSSPSASGSGSRKPASSPPAAKPA 121 P +EVGQ + V PP G RP A S+P GSG++ ASS P Sbjct: 116 PYLIEVGQVLRVVPP----GSDGTQAVVRPVLPGLAGSAPVQGGSGAQ--ASSAPVN--- 166 Query: 122 AKPQDDAGPGGAEAKVDWSWPTAGKSAPSADSYK-KGIDIIGSEGQSVVAAAAGKVTYAG 180 G++ V W WP G D K KG+DI G G V+A+A G+V Y+G Sbjct: 167 GNGSASPASSGSDEDVGWIWPAQGPLVAGFDEAKNKGLDISGKSGDPVLASADGRVVYSG 226 Query: 181 HGIRGYGNMVIIKHTPQLLSVYAHNKTILVKEGQTVTRGQQIATMGNSDTNKVKLYFEIR 240 G+RGYGN++I+KH L+ YAHNK++LVKE QTV +GQ+IA MGNSD+ KVKL+FEIR Sbjct: 227 AGLRGYGNLIILKHNNTFLTAYAHNKSLLVKEDQTVKKGQKIAEMGNSDSEKVKLHFEIR 286 Query: 241 RNGKPINVMAVLPAR 255 R GKP++ LPA+ Sbjct: 287 RQGKPVDPAKYLPAK 301 >ref|YP_001807935.1| peptidase M23 [Burkholderia ambifaria MC40-6] gb|ACB63719.1| Peptidase M23 [Burkholderia ambifaria MC40-6] Length = 230 Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 100/224 (44%), Positives = 132/224 (58%), Gaps = 23/224 (10%) Query: 33 GYYTVKRGDTLYSIGRDFDQSPANLRTWNRLRNPDDLEVGQRILVRPPVGVVARTGAGQS 92 GYY V+RGDTLY I R+ S AN+ WN++ NPD +EVGQ + V PP G + G Sbjct: 29 GYYRVERGDTLYKIARENRTSMANIVRWNQITNPDAIEVGQVLRVAPPPGTTTASAIGTG 88 Query: 93 PRPAASSSPSASGSGSRKPASSPPAAKPAAKPQDDAGPGGAEAKVDWSWPTAGKSAPSAD 152 + +PSA + KPASS + WP AG + D Sbjct: 89 SAGRSRPAPSAPVESAVKPASS----------------------IALIWPAAGNVVRTFD 126 Query: 153 SYK-KGIDIIGSEGQSVVAAAAGKVTYAGHGIRGYGNMVIIKHTPQLLSVYAHNKTILVK 211 K KGIDI + G V+AAA G V YAG+G+RGYGN++I+KH L+ YAHN+ +LVK Sbjct: 127 GSKSKGIDIANAAGSPVLAAAPGTVVYAGNGLRGYGNLIILKHNADYLTAYAHNRALLVK 186 Query: 212 EGQTVTRGQQIATMGNSDTNKVKLYFEIRRNGKPINVMAVLPAR 255 EGQ+VT+GQ IA MGNSD+++V L+FE+R G+ I+ LPAR Sbjct: 187 EGQSVTQGQTIAEMGNSDSDRVALHFELRYGGRSIDPARYLPAR 230 >emb|CBA26525.1| Lipoprotein nlpD/lppB homolog [Curvibacter putative symbiont of Hydra magnipapillata] Length = 297 Score = 178 bits (452), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 107/232 (46%), Positives = 141/232 (60%), Gaps = 9/232 (3%) Query: 33 GYYTVKRGDTLYSIGRDFDQSPANLRTWNRLRNPDDLEVGQRILVRPPVG--------VV 84 GYYTVK GDTL IG + QS ++ WN L NP+ +EVGQ + + PPV VV Sbjct: 66 GYYTVKPGDTLIRIGLESGQSHKDISRWNALENPNKIEVGQVLRIVPPVANETVSAKPVV 125 Query: 85 ARTGAGQSPRPAASSSPSASGSGSRKPASSPPAAKPAAKPQDDAGPGGAEAKVDWSWPTA 144 A T + PA++ +P+AS + S ++ A A G + V W WP Sbjct: 126 AATSTTTALPPASNPAPAASTAASAPAKAASAPASAPAATPAPVAVSGGDDTVAWMWPGN 185 Query: 145 GKSAPSADSYK-KGIDIIGSEGQSVVAAAAGKVTYAGHGIRGYGNMVIIKHTPQLLSVYA 203 G D K KG+DI G+ G V+AAA GKV YAG G+RGYGN++I+KH L+ YA Sbjct: 186 GAVLTGFDEVKNKGVDIAGNAGDPVLAAAEGKVVYAGSGLRGYGNLIILKHNNTYLTAYA 245 Query: 204 HNKTILVKEGQTVTRGQQIATMGNSDTNKVKLYFEIRRNGKPINVMAVLPAR 255 HN+T+LVKE QTV RGQ+IA MGNSD ++VKL+FE+R+ GKP++ LPAR Sbjct: 246 HNQTLLVKEDQTVKRGQKIAEMGNSDADRVKLHFEVRKQGKPVDPTKYLPAR 297