BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0035.0229.p (318 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776441.1| hemolysin-type secretion transmembrane prote... 450 e-124 gb|EGP45637.1| hemolysin-type secretion transmembrane protein [A... 245 9e-63 ref|YP_001279663.1| HlyD family type I secretion membrane fusion... 221 1e-55 ref|YP_264880.1| hlyD family secretion protein [Psychrobacter ar... 218 1e-54 ref|ZP_08460177.1| HlyD family secretion protein [Psychrobacter ... 212 7e-53 ref|YP_004555155.1| type I secretion membrane fusion protein Hly... 183 3e-44 ref|NP_901406.1| secretion protein [Chromobacterium violaceum AT... 176 7e-42 ref|YP_003655675.1| secretion protein HlyD family protein [Arcob... 162 6e-38 ref|YP_001944278.1| type I secretion membrane fusion protein, Hl... 162 9e-38 ref|NP_951337.1| HlyD family secretion protein [Geobacter sulfur... 143 4e-32 >ref|YP_003776441.1| hemolysin-type secretion transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ64533.1| hemolysin-type secretion transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 386 Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust. Identities = 223/225 (99%), Positives = 224/225 (99%) Query: 1 MEMNNEKNPLISAQWVLRLSMASVLVLLLWAAVSQIDQVTRAQGQVIAVSRTQSVQAPDG 60 MEMNNEKNPLISAQWVLRLSMASVLVLLLWAAVSQIDQVTRAQGQVIAVSRTQSVQAPDG Sbjct: 1 MEMNNEKNPLISAQWVLRLSMASVLVLLLWAAVSQIDQVTRAQGQVIAVSRTQSVQAPDG 60 Query: 61 GPVKQILVKEGEAVKQGQLLMVLEQDRVQTSLNDSRAKVAALRISLARLRAEVYGHPLNF 120 GPVKQILVKEGEAVKQGQLLMVLEQDRVQTSLNDSRAKVAALRISLARLRAEVYGHPLNF Sbjct: 61 GPVKQILVKEGEAVKQGQLLMVLEQDRVQTSLNDSRAKVAALRISLARLRAEVYGHPLNF 120 Query: 121 EPDLLDYKEYIANQKDLYVKRKILIDQDLASLQDMLGLANQELEMNKSLERTGDVGRADV 180 EPDLLDYKEYIANQKDLYVKRKILIDQDLASLQDMLGLANQELEMNKSLERTGDVGRADV Sbjct: 121 EPDLLDYKEYIANQKDLYVKRKILIDQDLASLQDMLGLANQELEMNKSLERTGDVGRADV 180 Query: 181 LRLQRNVADIRAQINNKRNKYFQEALVDMTKVQEDLNTQREQLAE 225 LRLQRNVADIRAQINNKRNKYFQEALVDMTKVQEDLNTQREQL + Sbjct: 181 LRLQRNVADIRAQINNKRNKYFQEALVDMTKVQEDLNTQREQLED 225 >gb|EGP45637.1| hemolysin-type secretion transmembrane protein [Achromobacter xylosoxidans AXX-A] Length = 412 Score = 245 bits (625), Expect = 9e-63, Method: Compositional matrix adjust. Identities = 119/215 (55%), Positives = 158/215 (73%) Query: 9 PLISAQWVLRLSMASVLVLLLWAAVSQIDQVTRAQGQVIAVSRTQSVQAPDGGPVKQILV 68 P A+W +R A + LL WAAV +IDQVTRA Q+IA +RTQ +Q+PDGG + Q+ V Sbjct: 34 PPRRARWCMRAMFAGLCALLAWAAVGKIDQVTRAPAQIIAAARTQVIQSPDGGIITQLHV 93 Query: 69 KEGEAVKQGQLLMVLEQDRVQTSLNDSRAKVAALRISLARLRAEVYGHPLNFEPDLLDYK 128 EG+ V G +L L+++R + +++DS AKVAALRI+LARL AEVYG PL F DL DY Sbjct: 94 SEGDVVHAGDVLATLQEERARAAVSDSNAKVAALRITLARLHAEVYGTPLEFPADLGDYH 153 Query: 129 EYIANQKDLYVKRKILIDQDLASLQDMLGLANQELEMNKSLERTGDVGRADVLRLQRNVA 188 +Y+ NQ+DLY KR+ I++DLA+ +ML LA QEL +N+ L TGDV +A++LRLQR VA Sbjct: 154 DYMRNQRDLYQKRRTAIEEDLAAQGNMLALARQELSINRKLVATGDVSQAEILRLQRAVA 213 Query: 189 DIRAQINNKRNKYFQEALVDMTKVQEDLNTQREQL 223 DI AQ+ ++RNKYFQ+A +MTK QEDL +Q EQL Sbjct: 214 DIEAQMTSRRNKYFQDAQAEMTKAQEDLTSQTEQL 248 >ref|YP_001279663.1| HlyD family type I secretion membrane fusion protein [Psychrobacter sp. PRwf-1] gb|ABQ93713.1| type I secretion membrane fusion protein, HlyD family [Psychrobacter sp. PRwf-1] Length = 389 Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 111/212 (52%), Positives = 157/212 (74%) Query: 12 SAQWVLRLSMASVLVLLLWAAVSQIDQVTRAQGQVIAVSRTQSVQAPDGGPVKQILVKEG 71 A+ + +++ + VLL+WA ++IDQVTRA+ VIA +RTQ VQA DGG + QILV EG Sbjct: 15 GARLSIWIALIGITVLLVWAYFAKIDQVTRAKATVIASARTQEVQASDGGVLTQILVSEG 74 Query: 72 EAVKQGQLLMVLEQDRVQTSLNDSRAKVAALRISLARLRAEVYGHPLNFEPDLLDYKEYI 131 + VK+GQLL+VLE++R Q + + S +K AAL LARL AE++ PL F ++ Y EY+ Sbjct: 75 DDVKKGQLLVVLEEERAQAAFDSSASKSAALEAQLARLNAEIFDRPLRFPDNVRKYPEYV 134 Query: 132 ANQKDLYVKRKILIDQDLASLQDMLGLANQELEMNKSLERTGDVGRADVLRLQRNVADIR 191 NQ LY +R+ I+++++SL+DML LA +EL+MN+ L GDV +ADV++L+R VADI+ Sbjct: 135 ENQTQLYNRRRQAINEEVSSLEDMLVLAQKELDMNEPLLAYGDVSQADVIKLRRQVADIK 194 Query: 192 AQINNKRNKYFQEALVDMTKVQEDLNTQREQL 223 AQINNKRNKYF++A +MTK QEDL+ + EQL Sbjct: 195 AQINNKRNKYFEDAQAEMTKAQEDLDAELEQL 226 >ref|YP_264880.1| hlyD family secretion protein [Psychrobacter arcticus 273-4] gb|AAZ19446.1| hlyD family secretion protein [Psychrobacter arcticus 273-4] Length = 389 Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 107/209 (51%), Positives = 155/209 (74%), Gaps = 3/209 (1%) Query: 15 WVLRLSMASVLVLLLWAAVSQIDQVTRAQGQVIAVSRTQSVQAPDGGPVKQILVKEGEAV 74 W+ + ++VLL+WA+ ++IDQVTRA+ VIA +RTQ +QAP+GG + ++ V EG+ V Sbjct: 21 WI---GLIGIVVLLVWASFAKIDQVTRAKATVIASARTQEIQAPEGGVLTELAVTEGQEV 77 Query: 75 KQGQLLMVLEQDRVQTSLNDSRAKVAALRISLARLRAEVYGHPLNFEPDLLDYKEYIANQ 134 K GQLL+VLE++R + +L++S + AAL+ LARL AE++ PL F D+ +Y EY+ NQ Sbjct: 78 KAGQLLVVLEEERAKAALDNSASNTAALKAKLARLNAEIFEKPLVFTKDVKNYPEYVQNQ 137 Query: 135 KDLYVKRKILIDQDLASLQDMLGLANQELEMNKSLERTGDVGRADVLRLQRNVADIRAQI 194 LY +R+ I+++++SL+ ML LA +EL MN+ L GDV +ADV++L R VADI AQI Sbjct: 138 TALYNRRRQAINEEVSSLEVMLVLAEKELSMNEPLLEYGDVSQADVIKLHRQVADIEAQI 197 Query: 195 NNKRNKYFQEALVDMTKVQEDLNTQREQL 223 NNKRNKYF+EA +MTK QE+L+T+ EQL Sbjct: 198 NNKRNKYFEEAQAEMTKAQEELDTELEQL 226 >ref|ZP_08460177.1| HlyD family secretion protein [Psychrobacter sp. 1501(2011)] gb|EGK14911.1| HlyD family secretion protein [Psychrobacter sp. 1501(2011)] Length = 389 Score = 212 bits (539), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 105/212 (49%), Positives = 156/212 (73%) Query: 12 SAQWVLRLSMASVLVLLLWAAVSQIDQVTRAQGQVIAVSRTQSVQAPDGGPVKQILVKEG 71 +A+ + +++ + +LL+WA ++IDQVTRA+ VIA +RTQ VQA +GG + ILV EG Sbjct: 15 NARLTIWIALVGITILLVWAYFAKIDQVTRAKATVIASARTQQVQASEGGVLTDILVSEG 74 Query: 72 EAVKQGQLLMVLEQDRVQTSLNDSRAKVAALRISLARLRAEVYGHPLNFEPDLLDYKEYI 131 + VK+GQLL+VLE++R + + + S K AAL+ LARL AE++ PL+F + Y EY+ Sbjct: 75 DEVKKGQLLVVLEEERAKAAYDSSATKSAALQAQLARLNAEIFDKPLSFPASVRQYPEYV 134 Query: 132 ANQKDLYVKRKILIDQDLASLQDMLGLANQELEMNKSLERTGDVGRADVLRLQRNVADIR 191 NQ LY +R+ I+++++SL+ ML LA +EL+MN+ L GDV +ADV++L+R VADI Sbjct: 135 ENQTQLYNRRRQAINEEVSSLEKMLVLAQKELDMNEPLLEYGDVSQADVIKLRRQVADIE 194 Query: 192 AQINNKRNKYFQEALVDMTKVQEDLNTQREQL 223 AQINNKRNKYF++A +MTK QE+L+++ EQL Sbjct: 195 AQINNKRNKYFEDAQAEMTKAQEELDSELEQL 226 >ref|YP_004555155.1| type I secretion membrane fusion protein HlyD family [Sphingobium chlorophenolicum L-1] gb|AEG50649.1| type I secretion membrane fusion protein, HlyD family [Sphingobium chlorophenolicum L-1] Length = 390 Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 92/194 (47%), Positives = 135/194 (69%) Query: 28 LLWAAVSQIDQVTRAQGQVIAVSRTQSVQAPDGGPVKQILVKEGEAVKQGQLLMVLEQDR 87 L+W+ +++DQV+RA GQ+I R Q +Q+ DGG + ILV+EGEAVK+GQLL+ L+ + Sbjct: 30 LIWSFWAELDQVSRAPGQIIPTGRVQVIQSTDGGKIANILVREGEAVKKGQLLVQLDDTK 89 Query: 88 VQTSLNDSRAKVAALRISLARLRAEVYGHPLNFEPDLLDYKEYIANQKDLYVKRKILIDQ 147 + ++ +++ KVA+L S+AR+ AE++ PL F ++ + +++ANQ LY KR+ + Sbjct: 90 ISAAVGEAQGKVASLMSSMARINAELFDRPLAFPAEVKPFPDFMANQTLLYQKRRQALQD 149 Query: 148 DLASLQDMLGLANQELEMNKSLERTGDVGRADVLRLQRNVADIRAQINNKRNKYFQEALV 207 LASL+ ML L QEL MN L + GDV RADVLRLQR V+DI++QI N +NKY Q+ Sbjct: 150 QLASLRAMLALMEQELNMNMPLLQHGDVSRADVLRLQRGVSDIQSQIVNAKNKYIQDLQA 209 Query: 208 DMTKVQEDLNTQRE 221 + TK +EDL T RE Sbjct: 210 EYTKTEEDLVTARE 223 >ref|NP_901406.1| secretion protein [Chromobacterium violaceum ATCC 12472] gb|AAQ59411.1| secretion protein [Chromobacterium violaceum ATCC 12472] Length = 382 Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 90/210 (42%), Positives = 140/210 (66%) Query: 7 KNPLISAQWVLRLSMASVLVLLLWAAVSQIDQVTRAQGQVIAVSRTQSVQAPDGGPVKQI 66 K P ++ S A+VL +WAA + +DQ+TR GQVIA S TQ VQA DGG ++ + Sbjct: 2 KPPSTHGGRLIWASAAAVLGAGVWAANAPLDQITRGSGQVIASSHTQIVQAADGGTMQHL 61 Query: 67 LVKEGEAVKQGQLLMVLEQDRVQTSLNDSRAKVAALRISLARLRAEVYGHPLNFEPDLLD 126 V+EG+ VK+GQLL +++ R ++ + +S A+ AAL +++RL+AEV+G F ++ Sbjct: 62 YVREGDRVKRGQLLAEMDRARAESMVKESEARAAALYANISRLKAEVFGGEPQFPVEVNG 121 Query: 127 YKEYIANQKDLYVKRKILIDQDLASLQDMLGLANQELEMNKSLERTGDVGRADVLRLQRN 186 Y E+ NQ L++KR+ I ++L+SLQ L + EL+MN L + GDV RAD+LRLQR Sbjct: 122 YPEFQRNQSILFIKRQAAIREELSSLQSSLAIVKNELDMNLPLVKQGDVSRADILRLQRQ 181 Query: 187 VADIRAQINNKRNKYFQEALVDMTKVQEDL 216 +A++ QI N++NKY Q++ +++K +EDL Sbjct: 182 MAELSGQITNRKNKYLQDSQTELSKAEEDL 211 >ref|YP_003655675.1| secretion protein HlyD family protein [Arcobacter nitrofigilis DSM 7299] gb|ADG93168.1| secretion protein HlyD family protein [Arcobacter nitrofigilis DSM 7299] Length = 388 Score = 162 bits (411), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 90/251 (35%), Positives = 159/251 (63%), Gaps = 2/251 (0%) Query: 1 MEMNNEKNPLISAQWVLRLSMASVLV-LLLWAAVSQIDQVTRAQGQVIAVSRTQSVQAPD 59 M+ N K P+ + ++ S +++ L+WA+++ IDQ++ A+G VI ++TQ +Q+ Sbjct: 1 MKNTNTKKPIEAPILIIIGSFFLLIIPFLVWASLTSIDQISHARGNVITTAKTQEIQSAL 60 Query: 60 GGPVKQILVKEGEAVKQGQLLMVLEQDRVQTSLNDSRAKVAALRISLARLRAEVYGHPLN 119 G VK I V+EG+ VK+ +L+ LE + + + S +KVAAL+ +LARL+AEVYG L Sbjct: 61 DGIVKDIKVREGKEVKENDILIELEDSQYKAAYESSYSKVAALKATLARLKAEVYGQDLV 120 Query: 120 FEPDLLDYKEYIANQKDLYVKRKILIDQDLASLQDMLGLANQELEMNKSLERTGDVGRAD 179 F + Y E I QK+L+ +R+ + + ++L + L L+ +EL + K L +TGDVG ++ Sbjct: 121 FPEMVKKYPELIQTQKELFRRRQKAQNDEKSALTESLLLSKEELRLIKPLLKTGDVGSSE 180 Query: 180 VLRLQRNVADIRAQINNKRNKYFQEALVDMTKVQEDLNTQREQLAESQLQ-EIRTIRGEM 238 ++R++R +AD +I NK+NKYFQ++ +MTK +E+L ++ ++L + ++ E TI+ M Sbjct: 181 IIRIKRQIADKEGEIINKQNKYFQDSQAEMTKSEEELYSKEQELEDKKINLERTTIKATM 240 Query: 239 CRQTDAILLAT 249 I++ T Sbjct: 241 DAIVKNIIITT 251 >ref|YP_001944278.1| type I secretion membrane fusion protein, HlyD family [Chlorobium limicola DSM 245] gb|ACD91299.1| type I secretion membrane fusion protein, HlyD family [Chlorobium limicola DSM 245] Length = 389 Score = 162 bits (409), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 92/201 (45%), Positives = 139/201 (69%) Query: 25 LVLLLWAAVSQIDQVTRAQGQVIAVSRTQSVQAPDGGPVKQILVKEGEAVKQGQLLMVLE 84 + ++WA+ ++I++VT G VIA SR Q +Q+ G ++ I V+EG++V++G +L LE Sbjct: 27 FISIIWASFAKIEEVTHTTGLVIASSRNQVIQSAIDGIIQSIPVQEGQSVQKGMVLANLE 86 Query: 85 QDRVQTSLNDSRAKVAALRISLARLRAEVYGHPLNFEPDLLDYKEYIANQKDLYVKRKIL 144 + + + + DS KVAAL +LARL AEV G PL F ++ Y ++I NQ +LY +RK Sbjct: 87 RTQAEAAQYDSFGKVAALEAALARLHAEVLGRPLEFPENVRAYPQFIENQTELYQRRKAA 146 Query: 145 IDQDLASLQDMLGLANQELEMNKSLERTGDVGRADVLRLQRNVADIRAQINNKRNKYFQE 204 ID ++ +LQ+ L LA +EL M L +GDVG+ +V+RLQR VA++ QIN KRNK+FQ+ Sbjct: 147 IDSEIRTLQESLRLAKEELSMMAPLLESGDVGKIEVIRLQRQVAELTGQINMKRNKFFQD 206 Query: 205 ALVDMTKVQEDLNTQREQLAE 225 A +MTK +EDL+TQ++ LAE Sbjct: 207 AQQEMTKYEEDLSTQKQLLAE 227 >ref|NP_951337.1| HlyD family secretion protein [Geobacter sulfurreducens PCA] gb|AAR33610.1| secretion protein, HlyD family [Geobacter sulfurreducens PCA] gb|ADI83110.1| efflux pump, RND family, membrane fusion protein [Geobacter sulfurreducens KN400] Length = 390 Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 76/210 (36%), Positives = 136/210 (64%), Gaps = 5/210 (2%) Query: 15 WVLRLSMASVLVLLLWAAVSQIDQVTRAQGQVIAVSRTQSVQAPDGGPVKQILVKEGEAV 74 W + + ++ +WA V ++DQ TR G VI+ SR Q +QA DGG ++ + VKEG+ V Sbjct: 19 WAF---VVAFILFFIWAYVYRVDQTTRGIGSVISSSRVQVIQAVDGGVLQSLKVKEGDRV 75 Query: 75 KQGQLLMVLEQDRVQTSLNDSRAKVAALRISLARLRAEVYGHP-LNFEPDLLDYKEYIAN 133 ++GQ++ +L+Q R S+ + A++AA++ ARLRAEV G P + F P+L + E + Sbjct: 76 RRGQVVALLDQTRSGASVRELDARLAAMKAQSARLRAEVLGSPSVAFPPELRGFPELVKV 135 Query: 134 QKDLYVKRKILIDQDLASLQDMLGLANQELEMNKSLERTGDVGRADVLRLQRNVADIRAQ 193 Q+ L+ +R+ + ++L +L + LA ++ + L +TGDV R++V+R +R + D AQ Sbjct: 136 QQALFDQRRQSLREELRTLDVAVKLAREDAHLVAQLAKTGDVSRSEVIRSERALNDAEAQ 195 Query: 194 INNKRNKYFQEALVDMTKVQEDLNTQREQL 223 + N++NKY+Q+A ++ K+++++N Q EQ+ Sbjct: 196 LINRKNKYYQDASAELAKIEDEIN-QNEQV 224