BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0035.0224.p (100 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EFV87511.1| transcriptional regulator [Achromobacter xylosoxi... 162 1e-38 gb|AEO47420.1| XRE family transcriptional regulator [Rhodospiril... 157 4e-37 ref|ZP_01103581.1| DNA-binding protein [Congregibacter litoralis... 157 5e-37 ref|ZP_08873156.1| transcriptional regulator-like protein [Vermi... 157 5e-37 ref|YP_986860.1| transcriptional regulator [Acidovorax sp. JS42]... 156 9e-37 ref|YP_868887.1| transcriptional regulator-like protein [Shewane... 156 1e-36 ref|ZP_08018520.1| XRE family transcriptional regulator [Lautrop... 155 3e-36 ref|YP_001971191.1| hypothetical protein Smlt1334 [Stenotrophomo... 154 3e-36 gb|EGP44416.1| transcriptional regulator [Achromobacter xylosoxi... 153 7e-36 ref|YP_608471.1| transcriptional regulator [Pseudomonas entomoph... 150 5e-35 >gb|EFV87511.1| transcriptional regulator [Achromobacter xylosoxidans C54] Length = 100 Score = 162 bits (411), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 77/100 (77%), Positives = 86/100 (86%) Query: 1 VSDIIESVRNELKELAEAGAISKMTLRHFDALCPPPVRQFSAQDIRRLRLSLKFSQPVFA 60 +S IIESVR +L L EAGAI+K+T+R FD+LCPPPVR F A DIRRLR +L FSQPVFA Sbjct: 1 MSKIIESVRGDLAALQEAGAITKVTMREFDSLCPPPVRTFGAADIRRLREALNFSQPVFA 60 Query: 61 LHLHTTASTVRKWESGETRPAGPALKLLNLLADKGLQVLL 100 LHLHTTASTVRKWE GETRP GPALKLLNL+ADKGLQ +L Sbjct: 61 LHLHTTASTVRKWEQGETRPTGPALKLLNLIADKGLQAIL 100 >gb|AEO47420.1| XRE family transcriptional regulator [Rhodospirillum rubrum F11] Length = 100 Score = 157 bits (397), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 75/100 (75%), Positives = 86/100 (86%) Query: 1 VSDIIESVRNELKELAEAGAISKMTLRHFDALCPPPVRQFSAQDIRRLRLSLKFSQPVFA 60 +S IIES+R++L L EAGAISK T+R FDALCPPPVR+FSA DI+ LR LKFSQPVFA Sbjct: 1 MSKIIESLRDDLAALHEAGAISKGTMREFDALCPPPVREFSAADIKHLREGLKFSQPVFA 60 Query: 61 LHLHTTASTVRKWESGETRPAGPALKLLNLLADKGLQVLL 100 HLHTTASTVRKWE GET P+GPALKLLN++ADKGLQ +L Sbjct: 61 RHLHTTASTVRKWEQGETHPSGPALKLLNVIADKGLQAIL 100 >ref|ZP_01103581.1| DNA-binding protein [Congregibacter litoralis KT71] gb|EAQ97053.1| DNA-binding protein [Congregibacter litoralis KT71] Length = 101 Score = 157 bits (397), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 73/100 (73%), Positives = 86/100 (86%) Query: 1 VSDIIESVRNELKELAEAGAISKMTLRHFDALCPPPVRQFSAQDIRRLRLSLKFSQPVFA 60 S IIES+R +L L +AGAISK+T+R FDA+CPPPVR+FSA DI+RLR +L FSQPVFA Sbjct: 2 TSKIIESLRGDLAALQDAGAISKVTMREFDAICPPPVREFSADDIKRLREALHFSQPVFA 61 Query: 61 LHLHTTASTVRKWESGETRPAGPALKLLNLLADKGLQVLL 100 HLHTTASTVRKWE GET PAGPALKLLN++ADKGLQ ++ Sbjct: 62 HHLHTTASTVRKWEQGETHPAGPALKLLNVIADKGLQAII 101 >ref|ZP_08873156.1| transcriptional regulator-like protein [Verminephrobacter sp. At4] Length = 101 Score = 157 bits (397), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 73/100 (73%), Positives = 86/100 (86%) Query: 1 VSDIIESVRNELKELAEAGAISKMTLRHFDALCPPPVRQFSAQDIRRLRLSLKFSQPVFA 60 S IIES+R +L L EAGAI K+T+R FDA+CPPPVR+FSA DI+RLR +L FSQPVFA Sbjct: 2 TSKIIESLRGDLAALHEAGAIDKVTMRGFDAICPPPVREFSATDIKRLRETLSFSQPVFA 61 Query: 61 LHLHTTASTVRKWESGETRPAGPALKLLNLLADKGLQVLL 100 HLHT+ASTVRKWE GETRPAGPALKLLN++ADKGLQ ++ Sbjct: 62 HHLHTSASTVRKWEQGETRPAGPALKLLNVIADKGLQAII 101 >ref|YP_986860.1| transcriptional regulator [Acidovorax sp. JS42] ref|YP_004387525.1| XRE family transcriptional regulator [Alicycliphilus denitrificans K601] gb|ABM42784.1| transcriptional regulator [Acidovorax sp. JS42] dbj|BAJ72207.1| hypothetical protein [Acidovorax sp. KKS102] gb|AEB84009.1| transcriptional regulator, XRE family [Alicycliphilus denitrificans K601] Length = 100 Score = 156 bits (395), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 73/100 (73%), Positives = 85/100 (85%) Query: 1 VSDIIESVRNELKELAEAGAISKMTLRHFDALCPPPVRQFSAQDIRRLRLSLKFSQPVFA 60 +S IIES+R +L L EAGAI K+T+R FDA+CPPPVR+FSA DI+ LR LKFSQPVFA Sbjct: 1 MSKIIESLRGDLAALHEAGAIGKVTMREFDAICPPPVREFSAADIKHLRERLKFSQPVFA 60 Query: 61 LHLHTTASTVRKWESGETRPAGPALKLLNLLADKGLQVLL 100 LHLHTTASTVRKWE GET P GPALKLLN++ADKGLQ ++ Sbjct: 61 LHLHTTASTVRKWEQGETHPTGPALKLLNVIADKGLQAII 100 >ref|YP_868887.1| transcriptional regulator-like protein [Shewanella sp. ANA-3] gb|ABK47481.1| transcriptional regulator-like protein [Shewanella sp. ANA-3] Length = 101 Score = 156 bits (394), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 73/100 (73%), Positives = 84/100 (84%) Query: 1 VSDIIESVRNELKELAEAGAISKMTLRHFDALCPPPVRQFSAQDIRRLRLSLKFSQPVFA 60 S IIES+R +L L AGAISK+T+R FD +CPPPVR+FSA DI+RLR L FSQPVFA Sbjct: 2 TSKIIESLRGDLDALHNAGAISKVTMREFDEICPPPVREFSADDIKRLREGLHFSQPVFA 61 Query: 61 LHLHTTASTVRKWESGETRPAGPALKLLNLLADKGLQVLL 100 HLHTTASTVRKWE GETRPAGPALKLLN++ADKGLQ ++ Sbjct: 62 HHLHTTASTVRKWEQGETRPAGPALKLLNVIADKGLQAII 101 >ref|ZP_08018520.1| XRE family transcriptional regulator [Lautropia mirabilis ATCC 51599] gb|EFV94950.1| XRE family transcriptional regulator [Lautropia mirabilis ATCC 51599] Length = 100 Score = 155 bits (391), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 70/100 (70%), Positives = 86/100 (86%) Query: 1 VSDIIESVRNELKELAEAGAISKMTLRHFDALCPPPVRQFSAQDIRRLRLSLKFSQPVFA 60 +S IIES+R +L+ L +AGAI K+T+R FDA+CPPPVR F A DI+RLR SL+FSQPVFA Sbjct: 1 MSKIIESLREDLETLHQAGAIDKVTMREFDAICPPPVRDFQAADIKRLRESLRFSQPVFA 60 Query: 61 LHLHTTASTVRKWESGETRPAGPALKLLNLLADKGLQVLL 100 LHLHT+AST+RKWE GET P GPALKLLN++ADKGLQ ++ Sbjct: 61 LHLHTSASTIRKWEQGETHPTGPALKLLNIIADKGLQAII 100 >ref|YP_001971191.1| hypothetical protein Smlt1334 [Stenotrophomonas maltophilia K279a] emb|CAQ44881.1| conserved hypothetical protein [Stenotrophomonas maltophilia K279a] Length = 101 Score = 154 bits (390), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 71/100 (71%), Positives = 85/100 (85%) Query: 1 VSDIIESVRNELKELAEAGAISKMTLRHFDALCPPPVRQFSAQDIRRLRLSLKFSQPVFA 60 S +IES+R +L L +AGAI K+T+R FDA+CPPPVR+FSA DI+ LR LKFSQPVFA Sbjct: 2 TSKLIESLRGDLAALHDAGAIGKVTMREFDAICPPPVREFSAADIKHLREELKFSQPVFA 61 Query: 61 LHLHTTASTVRKWESGETRPAGPALKLLNLLADKGLQVLL 100 LHLHTTASTVRKWE G+T PAGPALKLLN++ADKGLQ ++ Sbjct: 62 LHLHTTASTVRKWEQGDTHPAGPALKLLNIIADKGLQAII 101 >gb|EGP44416.1| transcriptional regulator [Achromobacter xylosoxidans AXX-A] Length = 100 Score = 153 bits (387), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 71/100 (71%), Positives = 84/100 (84%) Query: 1 VSDIIESVRNELKELAEAGAISKMTLRHFDALCPPPVRQFSAQDIRRLRLSLKFSQPVFA 60 +S IIE +R++L L +AG +SK+T+R FD +CPPPVR +A DIRRLR SL FSQPVFA Sbjct: 1 MSKIIEGIRDDLAALHDAGVVSKVTMREFDTICPPPVRPLAAADIRRLRESLNFSQPVFA 60 Query: 61 LHLHTTASTVRKWESGETRPAGPALKLLNLLADKGLQVLL 100 LHLHTTASTVRKWE GETRP GPALKLLNL+ADKGL+ +L Sbjct: 61 LHLHTTASTVRKWEQGETRPTGPALKLLNLIADKGLRAIL 100 >ref|YP_608471.1| transcriptional regulator [Pseudomonas entomophila L48] emb|CAK15678.1| putative transcriptional regulator [Pseudomonas entomophila L48] Length = 93 Score = 150 bits (380), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 70/93 (75%), Positives = 83/93 (89%) Query: 8 VRNELKELAEAGAISKMTLRHFDALCPPPVRQFSAQDIRRLRLSLKFSQPVFALHLHTTA 67 +R++L L +AGA+ K+TLR F+ALCP PVR FSA+DI+RLR +L FSQPVFALHLHT+A Sbjct: 1 MRDDLSALEQAGAVGKITLRDFEALCPAPVRAFSAEDIKRLREALNFSQPVFALHLHTSA 60 Query: 68 STVRKWESGETRPAGPALKLLNLLADKGLQVLL 100 STVRKWE GETRPAGPALKLLNL+ADKGLQV+L Sbjct: 61 STVRKWEQGETRPAGPALKLLNLIADKGLQVIL 93