BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0035.0205.p (775 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776414.1| two component hybrid sensor histidine kinase... 1542 0.0 ref|YP_001351704.1| CheA chemotaxis protein [Janthinobacterium s... 1049 0.0 ref|YP_004753021.1| CheA signal transduction histidine kinase [C... 838 0.0 ref|ZP_06840446.1| CheA signal transduction histidine kinase [Bu... 837 0.0 ref|YP_001897586.1| CheA signal transduction histidine kinase [B... 823 0.0 ref|YP_586106.1| signal transduction histidine kinase (cheA) [Cu... 823 0.0 ref|ZP_03129652.1| CheA signal transduction histidine kinase [Ch... 822 0.0 ref|YP_003750672.1| response regulator receiver ATP-binding hist... 820 0.0 emb|CCA87286.1| response regulator receiver ATP-binding histidin... 820 0.0 ref|YP_001861515.1| CheA signal transduction histidine kinase [B... 818 0.0 >ref|YP_003776414.1| two component hybrid sensor histidine kinase/response regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ64506.1| two component hybrid sensor histidine kinase/response regulator protein [Herbaspirillum seropedicae SmR1] Length = 775 Score = 1542 bits (3993), Expect = 0.0, Method: Compositional matrix adjust. Identities = 771/775 (99%), Positives = 772/775 (99%) Query: 1 MSTPDLSQMSMLDLFRFEAESQIAQLNASLLALEQQPTAADHLEACMRAGHSLKGAARIV 60 MSTPDLSQMSMLDLFRFEAESQIAQLNASLLALEQQPTAADHLEACMRAGHSLKGAARIV Sbjct: 1 MSTPDLSQMSMLDLFRFEAESQIAQLNASLLALEQQPTAADHLEACMRAGHSLKGAARIV 60 Query: 61 GLEPAVKVAHVLEDCFVLAQQGRLLLQKKHIDVLLRGADLLARIAAPPDGDEAWADHAGS 120 GLEPAVKVAHVLEDCFVLAQQGRLLLQKKHIDVLLRGADLLARIAAPPDGDEAWADHAGS Sbjct: 61 GLEPAVKVAHVLEDCFVLAQQGRLLLQKKHIDVLLRGADLLARIAAPPDGDEAWADHAGS 120 Query: 121 AEVQAFLVALPSVMSGGDAAPWPAATSAATSAPAPAAAEPVVAAAAQLPEPELAEPAPVP 180 AEVQAFLVALPSVMSGGDAAPWPAATSAATSAPAPAAAEPVVAAAAQLPEPELAEPAPVP Sbjct: 121 AEVQAFLVALPSVMSGGDAAPWPAATSAATSAPAPAAAEPVVAAAAQLPEPELAEPAPVP 180 Query: 181 AAPVAGAHLTNASGARAVRVSADSLDRLLGLTGESLVESRQLKPFSASMLRMKRTQREAM 240 AAPVAGAHL NASGARAVRVSADSLDRLLGLTGESLVESRQLKPFSASMLRMKRTQREAM Sbjct: 181 AAPVAGAHLANASGARAVRVSADSLDRLLGLTGESLVESRQLKPFSASMLRMKRTQREAM 240 Query: 241 QALDLLQQKLATTQLDEFAQTAFAELRTLMQQNQQLLGEQLSALDAFDRRSVNLSQRLYD 300 QALDLLQQKLATTQLDEFAQTAFAELRTLMQQNQQLLGEQLSALDAFDRRSVNLSQRLYD Sbjct: 241 QALDLLQQKLATTQLDEFAQTAFAELRTLMQQNQQLLGEQLSALDAFDRRSVNLSQRLYD 300 Query: 301 EALACRMRPFADGTAGLARMVRDVGNTLGKSVRLDIVGNTTQIDRDILEKLEAPIGHLLR 360 EALACRMRPFADGTAGLARMVRDVGNTLGKSVRLDIVGNTTQIDRDILEKLEAPIGHLLR Sbjct: 301 EALACRMRPFADGTAGLARMVRDVGNTLGKSVRLDIVGNTTQIDRDILEKLEAPIGHLLR 360 Query: 361 NAVDHGIESSAQRRAAGKPEQGVIRLEARHSAGMLLIEVADDGAGIDIEQVRRAVVARGL 420 NAVDHGIESSAQRRAAGKPEQGVIRLEARHSAGMLLIEVADDGAGIDIEQVR AVVARGL Sbjct: 361 NAVDHGIESSAQRRAAGKPEQGVIRLEARHSAGMLLIEVADDGAGIDIEQVRSAVVARGL 420 Query: 421 SNQETAERLSEAELLEFLLLPSFSLRDTVTEISGRGVGLDVVADMLKQVRGTIRITTQAG 480 SNQETAERLSEAELLEFLLLPSFSLRDTVTEISGRGVGLDVVADMLKQVRGTIRITTQAG Sbjct: 421 SNQETAERLSEAELLEFLLLPSFSLRDTVTEISGRGVGLDVVADMLKQVRGTIRITTQAG 480 Query: 481 QGSRFLMQLPLTLSVIRSLLVDISGEPYAFPLAYVNRTLRLPAEALQTLEGYQHFSHGGR 540 QGSRFLMQLPLTLSVIRSLLVDI+GEPYAFPLAYVNRTLRLPAEALQTLEGYQHFSHGGR Sbjct: 481 QGSRFLMQLPLTLSVIRSLLVDIAGEPYAFPLAYVNRTLRLPAEALQTLEGYQHFSHGGR 540 Query: 541 QVGLVSAHQVLQKGQWRSRDGSVCVVVIGEQEHTYGLAVDAFLGERMLVVQPLDPRLGKI 600 QVGLVSAHQVLQKGQWRSRDGSVCVVVIGEQEHTYGLAVDAFLGERMLVVQPLDPRLGKI Sbjct: 541 QVGLVSAHQVLQKGQWRSRDGSVCVVVIGEQEHTYGLAVDAFLGERMLVVQPLDPRLGKI 600 Query: 601 ADVLAGALMEDGTPLLILDVADMLRTVEKLTSSGRLQTVDQDGAAPTTTAARKKVLVVDD 660 ADVLAGALMEDGTPLLILDVADMLRTVEKLTSSGRLQTVDQDGAAPTTTAARKKVLVVDD Sbjct: 601 ADVLAGALMEDGTPLLILDVADMLRTVEKLTSSGRLQTVDQDGAAPTTTAARKKVLVVDD 660 Query: 661 SLTVRELERKLLTNRGYQVTVAVDGMDGWNAVRADRFDLVITDIDMPRMDGIELVSLIRG 720 SLTVRELERKLLTNRGYQVTVAVDGMDGWNAVRAD FDLVITDIDMPRMDGIELVSLIRG Sbjct: 661 SLTVRELERKLLTNRGYQVTVAVDGMDGWNAVRADSFDLVITDIDMPRMDGIELVSLIRG 720 Query: 721 AANLQSLPVMIVSYKDREEDRQRGLEAGADHYFTKSSFHDESLLQAVTDLIGEAT 775 AANLQSLPVMIVSYKDREEDRQRGLEAGADHYFTKSSFHDESLLQAVTDLIGEAT Sbjct: 721 AANLQSLPVMIVSYKDREEDRQRGLEAGADHYFTKSSFHDESLLQAVTDLIGEAT 775 >ref|YP_001351704.1| CheA chemotaxis protein [Janthinobacterium sp. Marseille] gb|ABR89022.1| CheA chemotaxis protein [Janthinobacterium sp. Marseille] Length = 756 Score = 1049 bits (2713), Expect = 0.0, Method: Compositional matrix adjust. Identities = 545/777 (70%), Positives = 624/777 (80%), Gaps = 24/777 (3%) Query: 1 MSTPDLSQMSMLDLFRFEAESQIAQLNASLLALEQQPTAADHLEACMRAGHSLKGAARIV 60 MS+PDLSQMSML+LFR EAESQ L+ LL LEQ P +AD LEACMRA HSLKGAARI+ Sbjct: 1 MSSPDLSQMSMLELFRQEAESQTHVLSIGLLELEQNPRSADQLEACMRAAHSLKGAARII 60 Query: 61 GLEPAVKVAHVLEDCFVLAQQGRLLLQKKHIDVLLRGADLLARIAAPPDGDEAWADHAGS 120 GL V VAHV+EDCFVLA++G LLL +K IDVLL G DLL RIA PP+ DE+W DHAG Sbjct: 61 GLAAGVDVAHVMEDCFVLARRGELLLHRKQIDVLLTGVDLLTRIANPPNNDESWGDHAGK 120 Query: 121 AEVQAFLVALPSVMS---GGDAAPWPAATSAATSAPAPAAAEPVVAAAAQLPEPELAEPA 177 E+ AF+ L + M+ GGD++ A +AA + A ++P+ A Sbjct: 121 PEITAFIAKLTTAMADPDGGDSSADTATDNAAGNLAVEAESQPISNGAM----------- 169 Query: 178 PVPAAPVAGAHLTNASGARAVRVSADSLDRLLGLTGESLVESRQLKPFSASMLRMKRTQR 237 A S R+VRV+A +LDRLL L+GESLVESR+LKPF+AS+LR+KRTQR Sbjct: 170 ---------ASEARESNIRSVRVNAKNLDRLLSLSGESLVESRRLKPFTASILRLKRTQR 220 Query: 238 EAMQALDLLQQKLATTQLDEFAQTAFAELRTLMQQNQQLLGEQLSALDAFDRRSVNLSQR 297 EA QALDLL QKL+ DE Q A +E+RTLM Q Q ++ +QL L+ FDRRSVNLSQR Sbjct: 221 EAGQALDLLHQKLSAQTADEATQAALSEVRTLMMQCQHMVADQLGELETFDRRSVNLSQR 280 Query: 298 LYDEALACRMRPFADGTAGLARMVRDVGNTLGKSVRLDIVGNTTQIDRDILEKLEAPIGH 357 LYDEALACRMRPFADGT G ARMVRDVG+ LGKSVRL+I+GN TQIDRDILEKLEAPIGH Sbjct: 281 LYDEALACRMRPFADGTHGYARMVRDVGHALGKSVRLEIIGNATQIDRDILEKLEAPIGH 340 Query: 358 LLRNAVDHGIESSAQRRAAGKPEQGVIRLEARHSAGMLLIEVADDGAGIDIEQVRRAVVA 417 LLRNA+DHGIE+ QR+AAGKPEQG+I LEARHSAGMLL+ V+DDGAGID++Q+R ++ Sbjct: 341 LLRNAIDHGIENPQQRKAAGKPEQGLITLEARHSAGMLLVNVSDDGAGIDLDQLRATIIE 400 Query: 418 RGLSNQETAERLSEAELLEFLLLPSFSLRDTVTEISGRGVGLDVVADMLKQVRGTIRITT 477 R LSN +T +LSEAELLEFLLLPSFSLRDTVT+ISGRGVGLDVV+DMLKQVRGTIRI++ Sbjct: 401 RKLSNADTVAQLSEAELLEFLLLPSFSLRDTVTDISGRGVGLDVVSDMLKQVRGTIRISS 460 Query: 478 QAGQGSRFLMQLPLTLSVIRSLLVDISGEPYAFPLAYVNRTLRLPAEALQTLEGYQHFSH 537 QG+RF MQLPLTLSVIRSLLV I+ EPYAFPLAYVNRTL L + L LEG QHF+ Sbjct: 461 TPQQGTRFQMQLPLTLSVIRSLLVTINEEPYAFPLAYVNRTLELRRDQLAMLEGQQHFTF 520 Query: 538 GGRQVGLVSAHQVLQKGQWRSRDGSVCVVVIGEQEHTYGLAVDAFLGERMLVVQPLDPRL 597 GRQ+GLVSAHQ+LQKG+ R++D V VVVIG+ EHTYGLAVD FLGERMLVVQPLD RL Sbjct: 521 DGRQIGLVSAHQILQKGELRAKDDLVSVVVIGDHEHTYGLAVDDFLGERMLVVQPLDNRL 580 Query: 598 GKIADVLAGALMEDGTPLLILDVADMLRTVEKLTSSGRLQTVDQDGAAPTTTAARKKVLV 657 GK+ +VLAGALMEDG P+LILDVADM+R+VEKLT++G+L V Q G RKKVLV Sbjct: 581 GKVPNVLAGALMEDGDPVLILDVADMVRSVEKLTAAGKLDVV-QHGGKNLNDVKRKKVLV 639 Query: 658 VDDSLTVRELERKLLTNRGYQVTVAVDGMDGWNAVRADRFDLVITDIDMPRMDGIELVSL 717 VDDSLTVRELERKLL+N GYQV VAVDGMDGWNAVR + FDLVITDIDMPRMDGIELVSL Sbjct: 640 VDDSLTVRELERKLLSNCGYQVVVAVDGMDGWNAVRTEHFDLVITDIDMPRMDGIELVSL 699 Query: 718 IRGAANLQSLPVMIVSYKDREEDRQRGLEAGADHYFTKSSFHDESLLQAVTDLIGEA 774 IR AANLQSLPVMIVSYKDREEDRQRGL+AGAD+YFTKSSFHDESLLQAV DLIG A Sbjct: 700 IRQAANLQSLPVMIVSYKDREEDRQRGLDAGADYYFTKSSFHDESLLQAVVDLIGAA 756 >ref|YP_004753021.1| CheA signal transduction histidine kinase [Collimonas fungivorans Ter331] gb|AEK62198.1| CheA signal transduction histidine kinase [Collimonas fungivorans Ter331] Length = 781 Score = 838 bits (2165), Expect = 0.0, Method: Compositional matrix adjust. Identities = 441/787 (56%), Positives = 561/787 (71%), Gaps = 21/787 (2%) Query: 1 MSTPDLSQMSMLDLFRFEAESQIAQLNASLLALEQQPTAA---DHLEACMRAGHSLKGAA 57 M+ +L SMLDLFR E E+Q +++ LLA+E+ P LEACMRA HS+KGAA Sbjct: 1 MNADELRDASMLDLFRMEVETQAQVMSSGLLAIERAPQHEPPQQQLEACMRAAHSIKGAA 60 Query: 58 RIVGLEPAVKVAHVLEDCFVLAQQGRLLLQKKHIDVLLRGADLLARIAAPPDGDEAWADH 117 RIVG++ V V HV+EDCFV AQQG++ L + ID+LL G DLL RIAA + E W Sbjct: 61 RIVGVQAGVDVTHVMEDCFVWAQQGKVQLGPRRIDLLLHGVDLLQRIAASAEDLELWQAG 120 Query: 118 AGSAEVQAFLVALPSVMSGGDAAPWPAATSAATSAPAPAAAEPVVAAAAQLPEPELAEPA 177 +G E++ FL L + + D A + + +EP + AAA+ + Sbjct: 121 SGRKEIETFLRGLETSLQQADDRAREAESVPELVPFSVPISEPAIVAAAETDDA------ 174 Query: 178 PVPAAPVAGAHLTNAS----------GARAVRVSADSLDRLLGLTGESLVESRQLKPFSA 227 VPAA A G R +RV+A L++L+ L+GESLVESR L F+ Sbjct: 175 -VPAADEAMTGQNQGKNQDKIKNQDQGDRMLRVTAAHLNQLVSLSGESLVESRWLPAFNQ 233 Query: 228 SMLRMKRTQREAMQALDLLQQKLATTQLDEFAQTAFAELRTLMQQNQQLLGEQLSALDAF 287 S+LR+KR Q+ Q+L+ L L L A ++R + +Q++L E+L+ L+ F Sbjct: 234 SLLRLKRLQQNTAQSLEALHDSLREGNLAGAHLKALQDVRQNIDASQKMLAERLTELELF 293 Query: 288 DRRSVNLSQRLYDEALACRMRPFADGTAGLARMVRDVGNTLGKSVRLDIVGNTTQIDRDI 347 +RR+ + +QRLYD+ALA RMRPFAD G RMVRD+G TLGK V+L+I G TTQ+DRDI Sbjct: 294 ERRNSSRAQRLYDQALASRMRPFADRVVGYDRMVRDLGRTLGKQVKLEINGQTTQVDRDI 353 Query: 348 LEKLEAPIGHLLRNAVDHGIESSAQRRAAGKPEQGVIRLEARHSAGMLLIEVADDGAGID 407 LE+L+AP+ HLLRNA+DHGIE+ QRRAAGK E+G++ L ARH AG+L I ++DDG G+D Sbjct: 354 LEQLDAPLVHLLRNALDHGIETPQQRRAAGKDEEGLVTLTARHHAGLLQITISDDGNGVD 413 Query: 408 IEQVRRAVVARGLSNQETAERLSEAELLEFLLLPSFSLRDTVTEISGRGVGLDVVADMLK 467 +EQ+R AVV RGL + TA RLS+AELL FLLLP FS+RDTVTEISGRGVGLDVV +MLK Sbjct: 414 LEQLRAAVVRRGLVDHATAGRLSDAELLHFLLLPGFSMRDTVTEISGRGVGLDVVHNMLK 473 Query: 468 QVRGTIRITTQAGQGSRFLMQLPLTLSVIRSLLVDISGEPYAFPLAYVNRTLRLPAEALQ 527 ++RGT++I ++AG G RF +QLPLTLS++RSLLV I GEPYAFPLAYVNRT+ L ++ Sbjct: 474 RMRGTVQIFSEAGHGMRFQLQLPLTLSLVRSLLVSIGGEPYAFPLAYVNRTMILERSQIE 533 Query: 528 TLEGYQHFSHGGRQVGLVSAHQVLQKGQWRSRDGSVCVVVIGEQEHTYGLAVDAFLGERM 587 +LEG QHF+ RQ+GLV+A Q+LQ G + + +VVIG+Q TYGL VD LGE M Sbjct: 534 SLEGRQHFAFEERQIGLVAASQILQSGDAAASGDRIALVVIGDQTQTYGLQVDRLLGEHM 593 Query: 588 LVVQPLDPRLGKIADVLAGALMEDGTPLLILDVADMLRTVEKLTSSGRLQTVDQDGAAPT 647 LVVQPLD RLGKI DV A ALMEDG+P+LILDVADML +VEKL + G+L + Q ++ Sbjct: 594 LVVQPLDARLGKIKDVAAAALMEDGSPVLILDVADMLNSVEKLIAQGQLSKI-QGNSSQQ 652 Query: 648 TTAARKKVLVVDDSLTVRELERKLLTNRGYQVTVAVDGMDGWNAVRADRFDLVITDIDMP 707 K+VLVVDDSLTVRELERKLL+NRGY V VAVDGMDGWNA+R++ FDLV+TDIDMP Sbjct: 653 QVQTSKRVLVVDDSLTVRELERKLLSNRGYTVRVAVDGMDGWNALRSEPFDLVVTDIDMP 712 Query: 708 RMDGIELVSLIRGAANLQSLPVMIVSYKDREEDRQRGLEAGADHYFTKSSFHDESLLQAV 767 RMDGIELV+LI+ L+++PVMIVSYKDR+EDRQRGLEAGAD+Y K+SFHDE+LLQAV Sbjct: 713 RMDGIELVTLIKKNLQLKAIPVMIVSYKDRQEDRQRGLEAGADYYLAKASFHDETLLQAV 772 Query: 768 TDLIGEA 774 DLIGEA Sbjct: 773 EDLIGEA 779 >ref|ZP_06840446.1| CheA signal transduction histidine kinase [Burkholderia sp. Ch1-1] gb|EFG72166.1| CheA signal transduction histidine kinase [Burkholderia sp. Ch1-1] Length = 796 Score = 837 bits (2161), Expect = 0.0, Method: Compositional matrix adjust. Identities = 451/791 (57%), Positives = 569/791 (71%), Gaps = 31/791 (3%) Query: 10 SMLDLFRFEAESQIAQLNASLLALEQQPTAADHLEACMRAGHSLKGAARIVGLEPAVKVA 69 S++DLFR EA +Q LN LLAL++ P A LEACMRA HSLKGAARIVG++ V++A Sbjct: 9 SLIDLFREEARTQARVLNDGLLALDRAPRDAAALEACMRAAHSLKGAARIVGVQVGVELA 68 Query: 70 HVLEDCFVLAQQGRLLLQKKHIDVLLRGADLLARIAAPPDGDEAWADHAGSAEVQAFLVA 129 H +EDCFV AQ+GR LL +D LLRG D++ARI D A A A +QA + A Sbjct: 69 HAMEDCFVAAQEGRALLDPAWVDELLRGVDIVARIGNDEDDSARAAVGACVASLQARMAA 128 Query: 130 -LP-SVMSGGDAAPWPAATS---------------AATSAPAPAAAEPVVAAAAQLPEPE 172 LP + D AP A S + +++P P AA ++A A + Sbjct: 129 VLPHGAVVRQDVAPPAAEVSEPVAGRAAEPPAPAPSVSASPDPDAAFNLLADALRAE--- 185 Query: 173 LAEPAPVPAAPVAGAHLTNASG---------ARAVRVSADSLDRLLGLTGESLVESRQLK 223 A P P + A +N + R +RV AD+LDRLL L+GESLVESR LK Sbjct: 186 -ATPQHAPDNTASRASASNITSSASSIAAESGRMLRVRADNLDRLLSLSGESLVESRWLK 244 Query: 224 PFSASMLRMKRTQREAMQALDLLQQKLATTQLDEFAQTAFAELRTLMQQNQQLLGEQLSA 283 PF+ SMLR+KR QR++ +ALD L + LA +LD A+ A E+R L ++Q LL E+L+ Sbjct: 245 PFAQSMLRVKRVQRDSTRALDQLHETLADLKLDPRARAALEEVRRLTAESQHLLAERLAD 304 Query: 284 LDAFDRRSVNLSQRLYDEALACRMRPFADGTAGLARMVRDVGNTLGKSVRLDIVGNTTQI 343 L++FDRRS +LSQ+LYD AL CRMRPF DGTAGLARMVRDV +LGK VR +VG +TQ+ Sbjct: 305 LESFDRRSTHLSQQLYDAALQCRMRPFGDGTAGLARMVRDVARSLGKKVRWQLVGESTQV 364 Query: 344 DRDILEKLEAPIGHLLRNAVDHGIESSAQRRAAGKPEQGVIRLEARHSAGMLLIEVADDG 403 DRDIL+ LEAP+GH+LRNA+DHGIE+ A R A GKPE+G + L+ARH+AG LLI V+DDG Sbjct: 365 DRDILDLLEAPLGHMLRNALDHGIEAPAVRLARGKPEEGTLTLDARHTAGALLITVSDDG 424 Query: 404 AGIDIEQVRRAVVARGLSNQETAERLSEAELLEFLLLPSFSLRDTVTEISGRGVGLDVVA 463 AGID++ +R ++V + L+++ET RLSEAELLEFL LP FSLRD VTE+SGRGVGLD V Sbjct: 425 AGIDLDALRASIVRKKLASEETVARLSEAELLEFLFLPGFSLRDQVTEVSGRGVGLDAVH 484 Query: 464 DMLKQVRGTIRITTQAGQGSRFLMQLPLTLSVIRSLLVDISGEPYAFPLAYVNRTLRLPA 523 D++K+VRGT+RI + G G+R +QLPLTLSVIRSLL++++GEPYA PLA+VNRTL + Sbjct: 485 DVVKRVRGTVRIAHEPGLGTRVQLQLPLTLSVIRSLLIEVAGEPYAVPLAHVNRTLHVSR 544 Query: 524 EALQTLEGYQHFSHGGRQVGLVSAHQVLQKGQWRSRDGSVCVVVIGEQEHTYGLAVDAFL 583 ++ LEG+QH + GR++G+V+AHQ+L +V ++V+G+ TYG+ VD FL Sbjct: 545 AEIELLEGHQHIAFSGRRIGVVTAHQILDTAPPADGGDTVSMIVVGDGAQTYGVVVDRFL 604 Query: 584 GERMLVVQPLDPRLGKIADVLAGALMEDGTPLLILDVADMLRTVEKLTSSGRLQTVDQDG 643 GERMLVVQPLDPRLGKI ++ AGALME+G P+LI DV D LR+VE+L + G L+ + +G Sbjct: 605 GERMLVVQPLDPRLGKIRNITAGALMENGDPVLIADVDDWLRSVERLVAGGDLRRM-HNG 663 Query: 644 AAPTTTAARKKVLVVDDSLTVRELERKLLTNRGYQVTVAVDGMDGWNAVRADRFDLVITD 703 A A ++VLVVDDSLTVRELERKLL RGY VT+AVDGMDGWNAVR +RFDLVITD Sbjct: 664 VAHAAQRAARRVLVVDDSLTVRELERKLLATRGYDVTIAVDGMDGWNAVRGERFDLVITD 723 Query: 704 IDMPRMDGIELVSLIRGAANLQSLPVMIVSYKDREEDRQRGLEAGADHYFTKSSFHDESL 763 IDMPRMDGIELV+LI+ LQSLPVMIVSYKDREEDR+ GL AGAD+Y K SFHDE+L Sbjct: 724 IDMPRMDGIELVTLIKRDPQLQSLPVMIVSYKDREEDRRAGLNAGADYYLAKGSFHDEAL 783 Query: 764 LQAVTDLIGEA 774 L AV DLIGEA Sbjct: 784 LDAVRDLIGEA 794 >ref|YP_001897586.1| CheA signal transduction histidine kinase [Burkholderia phytofirmans PsJN] gb|ACD18362.1| CheA signal transduction histidine kinase [Burkholderia phytofirmans PsJN] Length = 804 Score = 823 bits (2127), Expect = 0.0, Method: Compositional matrix adjust. Identities = 464/804 (57%), Positives = 574/804 (71%), Gaps = 35/804 (4%) Query: 3 TPDLSQMSMLDLFRFEAESQIAQLNASLLALEQQPTAADHLEACMRAGHSLKGAARIVGL 62 T D + S++DLFR EA +Q LN LLAL++ P A LEACMRA HSLKGAARIVG+ Sbjct: 2 TDDPRRPSLIDLFREEARTQARVLNDGLLALDRAPRDAAALEACMRAAHSLKGAARIVGV 61 Query: 63 EPAVKVAHVLEDCFVLAQQGRLLLQKKHIDVLLRGADLLARIAAPPDGDEAWADHAGS-- 120 + V++AH +EDCFV AQ+GR LL ID LLRG D++ARI D DE+ D G+ Sbjct: 62 QVGVELAHAMEDCFVAAQEGRALLDAAWIDELLRGVDIVARIGN--DEDESARDAVGTCV 119 Query: 121 AEVQAFLVALPSVMSGGDAAPWPAATSAATSAPA----------PAAAEPVVAAAAQL-P 169 A +QA + +P + P AT+A +PA P A +A A + Sbjct: 120 AALQARMAGVPPHGAAIRRDTTPPATAAVIESPAIALGVNANPDPDAVFNSLADALRAEA 179 Query: 170 EPELAEPAPVP----------------AAPVAGAHLTNASG---ARAVRVSADSLDRLLG 210 P A PAP AAP A T A R +RV AD+LDRLL Sbjct: 180 RPADATPAPTQDDNAALAPAQKQHDPFAAPFASNSTTIAPATEPGRMLRVRADNLDRLLS 239 Query: 211 LTGESLVESRQLKPFSASMLRMKRTQREAMQALDLLQQKLATTQLDEFAQTAFAELRTLM 270 L+GESLVESR LKPF+ SMLR+KR QR+ +ALD L + LA +LD AQ A ELR L Sbjct: 240 LSGESLVESRWLKPFAQSMLRIKRVQRDGTRALDQLHETLADLKLDPRAQAALEELRRLT 299 Query: 271 QQNQQLLGEQLSALDAFDRRSVNLSQRLYDEALACRMRPFADGTAGLARMVRDVGNTLGK 330 ++Q +L E+L+ L++FDRRS +LSQ+LYD AL CRMRPF DGT+GLARMVRDV +LGK Sbjct: 300 AESQHMLAERLADLESFDRRSTHLSQQLYDAALQCRMRPFGDGTSGLARMVRDVARSLGK 359 Query: 331 SVRLDIVGNTTQIDRDILEKLEAPIGHLLRNAVDHGIESSAQRRAAGKPEQGVIRLEARH 390 +R +VG +TQ+DRDIL+ LEAP+GH+LRNA+DHGIE+ A R A GKPE+G + L+ARH Sbjct: 360 KMRWQLVGESTQVDRDILDLLEAPLGHMLRNALDHGIEAPAVRLARGKPEEGTLTLDARH 419 Query: 391 SAGMLLIEVADDGAGIDIEQVRRAVVARGLSNQETAERLSEAELLEFLLLPSFSLRDTVT 450 +AG LLI V+DDGAGID++ +R +VV + L+++ET RLSEAELLEFLLLP FSLRD VT Sbjct: 420 TAGTLLITVSDDGAGIDLDALRASVVRKKLASEETVARLSEAELLEFLLLPGFSLRDQVT 479 Query: 451 EISGRGVGLDVVADMLKQVRGTIRITTQAGQGSRFLMQLPLTLSVIRSLLVDISGEPYAF 510 E+SGRGVGLD V D++K+VRGT+RIT + G G+R +QLPLTLSVIRSLLV+++GEPYA Sbjct: 480 EVSGRGVGLDAVHDVVKRVRGTVRITHEPGLGTRVQLQLPLTLSVIRSLLVEVAGEPYAV 539 Query: 511 PLAYVNRTLRLPAEALQTLEGYQHFSHGGRQVGLVSAHQVLQKGQWRSRDGSVCVVVIGE 570 PLA+VNRTL + ++ LEG+QH + GR++G+V+AHQ+L +V ++VIG+ Sbjct: 540 PLAHVNRTLHVNRAEIELLEGHQHIAFSGRRIGVVTAHQILDAAPPADEGRTVSMIVIGD 599 Query: 571 QEHTYGLAVDAFLGERMLVVQPLDPRLGKIADVLAGALMEDGTPLLILDVADMLRTVEKL 630 TYG+ VD FLGERMLVVQPLDPRLGKI ++ AGALME+G P+LI DV D LR+VE+L Sbjct: 600 GSQTYGVVVDRFLGERMLVVQPLDPRLGKIRNITAGALMENGDPVLIADVDDWLRSVERL 659 Query: 631 TSSGRLQTVDQDGAAPTTTAARKKVLVVDDSLTVRELERKLLTNRGYQVTVAVDGMDGWN 690 + G L+ Q G A A ++VLVVDDSLTVRELERKLL RGY VT+AVDGMDGWN Sbjct: 660 VAGGDLKHT-QHGDARAAQRATRRVLVVDDSLTVRELERKLLATRGYDVTIAVDGMDGWN 718 Query: 691 AVRADRFDLVITDIDMPRMDGIELVSLIRGAANLQSLPVMIVSYKDREEDRQRGLEAGAD 750 AVR +RFDLVITDIDMPRMDGIELV+LI+ LQSLPVMIVSYKDREEDR+ GL AGAD Sbjct: 719 AVRGERFDLVITDIDMPRMDGIELVTLIKRDPQLQSLPVMIVSYKDREEDRRAGLNAGAD 778 Query: 751 HYFTKSSFHDESLLQAVTDLIGEA 774 +Y K SFHDE+LL AV DLIGEA Sbjct: 779 YYLAKGSFHDEALLDAVRDLIGEA 802 >ref|YP_586106.1| signal transduction histidine kinase (cheA) [Cupriavidus metallidurans CH34] gb|ABF10837.1| signal transduction histidine kinase (cheA) [Cupriavidus metallidurans CH34] Length = 768 Score = 823 bits (2125), Expect = 0.0, Method: Compositional matrix adjust. Identities = 436/776 (56%), Positives = 551/776 (71%), Gaps = 12/776 (1%) Query: 1 MSTPDLSQMSMLDLFRFEAESQIAQLNASLLALEQQPTAADHLEACMRAGHSLKGAARIV 60 M+ L S+LDLF EA++Q LNA LLALE+ PTAA LEACMRA HSLKGAARIV Sbjct: 1 MNPEQLRDASLLDLFALEADAQADVLNAGLLALERDPTAAVQLEACMRAAHSLKGAARIV 60 Query: 61 GLEPAVKVAHVLEDCFVLAQQGRLLLQKKHIDVLLRGADLLARIAAPPDGDEAWADHAGS 120 GLE V+VAHV+EDC V AQ+G LLL HID LL+G DLL RI PPDG+ W + G Sbjct: 61 GLEGGVRVAHVMEDCLVAAQRGGLLLSASHIDALLQGTDLLQRIGHPPDGNANWPELGGK 120 Query: 121 AEVQAFLVALPSVMSGGDAAPWPAATSAATSAPAPAAAEPVVAAAAQLPEPELAEPAPVP 180 AE+ AF+ L +++ GG A AA +AP A + P P + P+ Sbjct: 121 AEIDAFVARLEALLDGG-------ADVAALAAPT-VLPPAAEPAPPEPPLPTVNHPSTST 172 Query: 181 AAPVAGAHLTNASGARAVRVSADSLDRLLGLTGESLVESRQLKPFSASMLRMKRTQREAM 240 P T ++ R +RV+A+ LDRLL + GES+VE+ L+PF ++ + +R Q M Sbjct: 173 VVPAQPQEYTGSNQERILRVNAERLDRLLAMAGESMVETHWLRPFGVAIQQARRQQMRVM 232 Query: 241 QALDLLQQKLATTQLD-EFAQTAFAELRTLMQQNQQLLGEQLSALDAFDRRSVNLSQRLY 299 QALD +Q L + + A E R L++ + L +++ D +D R LS+RLY Sbjct: 233 QALDGVQALLDSPDSTVPRLRAALMETRQLLEDSHGQLTQRVEEFDQYDHRQSGLSRRLY 292 Query: 300 DEALACRMRPFADGTAGLARMVRDVGNTLGKSVRLDIVGNTTQIDRDILEKLEAPIGHLL 359 D AL+CRMRP ADG G +RMVRD+G +LGK VRL++ G TQ+DRDILE L+AP+ HLL Sbjct: 293 DTALSCRMRPLADGITGYSRMVRDLGRSLGKRVRLELSGEQTQVDRDILEHLDAPLAHLL 352 Query: 360 RNAVDHGIESSAQRRAAGKPEQGVIRLEARHSAGMLLIEVADDGAGIDIEQVRRAVVARG 419 RNAVDHGIE+ RRAAGKPE+G + L A H+AG L+IE+ DDGAG+D+E +R A+V RG Sbjct: 353 RNAVDHGIEAPDTRRAAGKPEEGRVSLHAWHNAGRLVIEIFDDGAGVDLEALRAAIVRRG 412 Query: 420 LSNQETAERLSEAELLEFLLLPSFSLRDTVTEISGRGVGLDVVADMLKQVRGTIRITTQA 479 L+ +T RLS+AELLEFLLLP FS+R+TV+E+SGRGVGLD V DM++ VRG++R++ Q Sbjct: 413 LAQADTVARLSQAELLEFLLLPGFSMRETVSEVSGRGVGLDAVQDMVRAVRGSLRLSQQP 472 Query: 480 GQGSRFLMQLPLTLSVIRSLLVDISGEPYAFPLAYVNRTLRLPAEALQTLEGYQHFSHGG 539 G G F ++LPLTLS++R+LLV+ISGE YAFPL +V R + + E ++ E +QHF H G Sbjct: 473 GSGLHFHLELPLTLSIVRALLVEISGEAYAFPLGHVLRAVAVRREDIEQTEQHQHFRHDG 532 Query: 540 RQVGLVSAHQVLQKGQWRSRDG-SVCVVVIGEQEHTYGLAVDAFLGERMLVVQPLDPRLG 598 + VGL+SA QVLQ+ + R +DG +V VVVIGEQ+ YG+AVD +GER+LVVQPL LG Sbjct: 533 KPVGLISAAQVLQRPE-RGQDGDTVPVVVIGEQDRVYGIAVDRLIGERLLVVQPLAQALG 591 Query: 599 KIADVLAGALMEDGTPLLILDVADMLRTVEKLTSSGRLQTVDQDGAAPTTTAARKKVLVV 658 KI D+ AG+L +DG P+LI DV DMLR+VEKL S GR++ V G T T RK+VLVV Sbjct: 592 KIKDIAAGSLTDDGMPVLIFDVEDMLRSVEKLVSDGRIERVRHGGEEATQT-RRKRVLVV 650 Query: 659 DDSLTVRELERKLLTNRGYQVTVAVDGMDGWNAVRADRFDLVITDIDMPRMDGIELVSLI 718 DDSLTVRELERKLL+ RGY V VAVDGMDGWN +RA+ FDLVITD+DMPRMDGIELVS I Sbjct: 651 DDSLTVRELERKLLSGRGYDVAVAVDGMDGWNVLRAESFDLVITDVDMPRMDGIELVSRI 710 Query: 719 RGAANLQSLPVMIVSYKDREEDRQRGLEAGADHYFTKSSFHDESLLQAVTDLIGEA 774 RG L LPVMIVSYKDRE+DR+RGL+AGAD+Y K SFHD +LL AV DLIGEA Sbjct: 711 RGDTRLTHLPVMIVSYKDREQDRERGLQAGADYYLAKGSFHDTALLDAVRDLIGEA 766 >ref|ZP_03129652.1| CheA signal transduction histidine kinase [Chthoniobacter flavus Ellin428] gb|EDY19641.1| CheA signal transduction histidine kinase [Chthoniobacter flavus Ellin428] Length = 741 Score = 822 bits (2122), Expect = 0.0, Method: Compositional matrix adjust. Identities = 441/774 (56%), Positives = 547/774 (70%), Gaps = 38/774 (4%) Query: 2 STPDLSQMSMLDLFRFEAESQIAQLNASLLALEQQPTAADHLEACMRAGHSLKGAARIVG 61 S PDLS +SM +LFR EAE+Q L A LLALE+ P A HLE+ MRA HS+KGAARIVG Sbjct: 5 SIPDLSGISMAELFRIEAEAQTQTLTAGLLALERDPADAAHLESLMRAAHSIKGAARIVG 64 Query: 62 LEPAVKVAHVLEDCFVLAQQGRLLLQKKHIDVLLRGADLLARIAAPPDGDEA-WADHAGS 120 + AV VAH +EDCFV AQ+G L L + ID+LL G DLL+RIA + + A W G+ Sbjct: 65 INAAVNVAHAMEDCFVAAQKGALTLGQAEIDILLEGVDLLSRIANSSEAEMAKW---EGA 121 Query: 121 AEVQAFLVALPSVMSGGDAAPWPAATSAATSAPAPAAAEPVVAAAAQLPEPELAEPAPVP 180 AE+++FL L + PA A+ AA A A+P Sbjct: 122 AEIESFLARLAN--------------------PANASNAVATAAPAASAPARSADP---- 157 Query: 181 AAPVAGAHLTNASGARAVRVSADSLDRLLGLTGESLVESRQLKPFSASMLRMKRTQREAM 240 T A+ R +RV+AD L+RLLGL GESLVE+R L PF+ S+LR+KR Q+E Sbjct: 158 ---------TTANADRVLRVTADHLNRLLGLAGESLVEARWLDPFARSLLRLKRMQQEFG 208 Query: 241 QALDLLQQKLATTQLDEFAQTAFAELRTLMQQNQQLLGEQLSALDAFDRRSVNLSQRLYD 300 + + L+ LA T L E AQ A L + + LG +L L+ FDRRS NLS RLYD Sbjct: 209 KCTEELRNALAGTPLSEDAQMRLAALEKKGAECRDFLGARLVELEMFDRRSGNLSHRLYD 268 Query: 301 EALACRMRPFADGTAGLARMVRDVGNTLGKSVRLDIVGNTTQIDRDILEKLEAPIGHLLR 360 EALA RMRPF D R+VRD+G +LGK VRL+IVG TQ+DRDILEKLEAP+ HLLR Sbjct: 269 EALALRMRPFIDSAQNFPRLVRDIGRSLGKEVRLEIVGEQTQVDRDILEKLEAPLNHLLR 328 Query: 361 NAVDHGIESSAQRRAAGKPEQGVIRLEARHSAGMLLIEVADDGAGIDIEQVRRAVVARGL 420 NAVDHGI+ +R AAGKP +G + LEARHSAGMLLI V DDG GID+E VR AVVAR L Sbjct: 329 NAVDHGIDFPEERLAAGKPREGTVWLEARHSAGMLLITVRDDGRGIDVESVRGAVVARKL 388 Query: 421 SNQETAERLSEAELLEFLLLPSFSLRDTVTEISGRGVGLDVVADMLKQVRGTIRITTQAG 480 +N+ETA ++S+AELLEFL LP F+++ VTE+SGRGVGLDVV +KQ+RGT+R T++ G Sbjct: 389 TNEETAAKMSDAELLEFLFLPGFTMKTEVTEVSGRGVGLDVVQVTMKQLRGTLRTTSELG 448 Query: 481 QGSRFLMQLPLTLSVIRSLLVDISGEPYAFPLAYVNRTLRLPAEALQTLEGYQHFSHGGR 540 +G+ +QLPLTLSV+R+L+V+I+GEPY PLA + RTL+L ++ LEG HF+ G+ Sbjct: 449 RGTAIQLQLPLTLSVLRALVVEIAGEPYGIPLAAITRTLKLGKGKVEMLEGRPHFAFDGQ 508 Query: 541 QVGLVSAHQVLQKGQWRSRDGSVCVVVIGEQEHTYGLAVDAFLGERMLVVQPLDPRLGKI 600 ++GLV+A QV +KG+ + VV+IG++ + YGL +D FLGER LVVQPLD RLGK+ Sbjct: 509 RIGLVTARQVFEKGESPLSGDELPVVIIGDRGNRYGLVLDRFLGERELVVQPLDSRLGKV 568 Query: 601 ADVLAGALMEDGTPLLILDVADMLRTVEKLTSSGRLQTVDQDGAAPTTTAARKKVLVVDD 660 ++ AGAL +DG PLLI DV DMLR++EKL++SGRL+ V Q +A A RK+VLVVDD Sbjct: 569 PNISAGALADDGAPLLIADVEDMLRSIEKLSASGRLENV-QRSSAGAQPARRKRVLVVDD 627 Query: 661 SLTVRELERKLLTNRGYQVTVAVDGMDGWNAVRADRFDLVITDIDMPRMDGIELVSLIRG 720 SLTVRELERKLL GY V +AVDGMDGWNAVR DLVITD+DMPRMDGIELVSLIR Sbjct: 628 SLTVRELERKLLEGHGYAVEIAVDGMDGWNAVRTGDHDLVITDVDMPRMDGIELVSLIRK 687 Query: 721 AANLQSLPVMIVSYKDREEDRQRGLEAGADHYFTKSSFHDESLLQAVTDLIGEA 774 NL+S P+MIVSYKDREEDR RGLEAGAD+Y TK SFHDESL+ +V DLIGE+ Sbjct: 688 DPNLKSKPIMIVSYKDREEDRARGLEAGADYYLTKGSFHDESLISSVADLIGES 741 >ref|YP_003750672.1| response regulator receiver ATP-binding histidine kinase, chea family [Ralstonia solanacearum PSI07] emb|CBJ36076.1| Response regulator receiver ATP-binding histidine kinase, cheA family [Ralstonia solanacearum PSI07] Length = 772 Score = 820 bits (2118), Expect = 0.0, Method: Compositional matrix adjust. Identities = 462/785 (58%), Positives = 543/785 (69%), Gaps = 26/785 (3%) Query: 1 MSTPD-LSQMSMLDLFRFEAESQIAQLNASLLALEQQPTAADHLEACMRAGHSLKGAARI 59 MST D + S+L LF EA++Q L+ LL LE P LEACMRA HSLKGAARI Sbjct: 1 MSTDDDPGRQSLLALFHEEAQTQGRVLSDGLLTLEHAPADTGALEACMRAAHSLKGAARI 60 Query: 60 VGLEPAVKVAHVLEDCFVLAQQGRLLLQKKHIDVLLRGADLLARIAAP-PDGDEAWADHA 118 +GL+ V VAH +E+ FV AQ+G L L HIDVLLRG DLL R+ P P G AD Sbjct: 61 IGLQDGVDVAHRMEEWFVAAQRGELTLSAGHIDVLLRGTDLLQRLGQPNPAGPVTRAD-- 118 Query: 119 GSAEVQAFLVALPSVMSGGDAAPWPAATSAATSAPAPAAAEPVVAAAAQLPEPELAEPAP 178 V AF+V++P+ A AA A A AE A P + A Sbjct: 119 ----VDAFIVSMPASAGASGRAAEDAALRTAL---ARLGAESAALTAGTAGTPWAVDVAS 171 Query: 179 VPAAPVAGAHLT-----NASGAR-AVRVSADSLDRLLGLTGESLVESRQLKPFSASMLRM 232 P PVA + NA R +RV ADSLDRLL L+GESLVESR LKPF+ SMLR+ Sbjct: 172 APPVPVAADDYSIVPPGNARDPRRMLRVRADSLDRLLSLSGESLVESRWLKPFAESMLRV 231 Query: 233 KRTQREAMQALDLLQQKLATTQLDEFAQTAFAELRTLMQQNQQLLGEQLSALDAFDRRSV 292 KRT RE ALD ++L +LD A A +R ++ QQ LGE + LD FDRRS Sbjct: 232 KRTHRETAHALDACYERL-VERLDPDAHAALNAVRQMLGSLQQALGEHVDELDRFDRRST 290 Query: 293 NLSQRLYDEALACRMRPFADGTAGLARMVRDVGNTLGKSVRLDIVGNTTQIDRDILEKLE 352 L+Q+LYDEAL CRMRPF D T R+VRD+ +LGK VR +VG TQ+DRDIL+ L+ Sbjct: 291 GLAQQLYDEALQCRMRPFGDATHAYPRLVRDLARSLGKRVRFAVVGEATQVDRDILDLLD 350 Query: 353 APIGHLLRNAVDHGIESSAQRRAAGKPEQGVIRLEARHSAGMLLIEVADDGAGIDIEQVR 412 AP+GHLLRNA+DHGIE QR A GKP + + LEARHSAG LLI VADDGAGID+E VR Sbjct: 351 APLGHLLRNAIDHGIEPPEQRAALGKPAEAAVTLEARHSAGKLLIIVADDGAGIDLEAVR 410 Query: 413 RAVVARGLSNQETAERLSEAELLEFLLLPSFSLRDTVTEISGRGVGLDVVADMLKQVRGT 472 AVV RGL++ ETA RLS+ ELLEFLLLP FS+RD VT++SGRGVGLD V +M+K VRGT Sbjct: 411 AAVVRRGLADPETAGRLSDHELLEFLLLPGFSMRDRVTDVSGRGVGLDAVHEMVKAVRGT 470 Query: 473 IRITTQAGQGSRFLMQLPLTLSVIRSLLVDISGEPYAFPLAYVNRTLRLPAEALQTLEGY 532 +RI + G+G+RF++QLPLTLSVIRSLLVD+ GE YAFPLA+V RTL L + LEG Sbjct: 471 VRIHNEPGRGARFVLQLPLTLSVIRSLLVDVGGEAYAFPLAHVRRTLELSRNGIDMLEGQ 530 Query: 533 QHFSHGGRQVGLVSAHQVLQKGQWRSRDG---SVCVVVIGEQEHTYGLAVDAFLGERMLV 589 QHF GR VGLV AHQ+ R+ DG S VVVIGE TYG+AVD FLGERMLV Sbjct: 531 QHFPFEGRPVGLVMAHQLFGT---RAPDGARASAAVVVIGEGAETYGIAVDRFLGERMLV 587 Query: 590 VQPLDPRLGKIADVLAGALMEDGTPLLILDVADMLRTVEKLTSSGRLQTVDQDGAAPTTT 649 VQPLD RLGK+ D+ A ALME+G +LI+DV D+LR+V++L GRL V + A T Sbjct: 588 VQPLDARLGKVRDIAAAALMENGEAVLIVDVDDLLRSVDRLVRGGRLDKVQRGQGA--TV 645 Query: 650 AARKKVLVVDDSLTVRELERKLLTNRGYQVTVAVDGMDGWNAVRADRFDLVITDIDMPRM 709 RK VLVVDDSLTVRELERKLL RGY VTVAVDGMDGWNA+R FDLV+TDIDMPRM Sbjct: 646 QHRKHVLVVDDSLTVRELERKLLEKRGYAVTVAVDGMDGWNALRGTPFDLVVTDIDMPRM 705 Query: 710 DGIELVSLIRGAANLQSLPVMIVSYKDREEDRQRGLEAGADHYFTKSSFHDESLLQAVTD 769 DGIELV+LI+ A L++LPVMIVSYKDREEDR+RGLEAGAD+Y K SFHDE+LL AV D Sbjct: 706 DGIELVTLIKRDAALKALPVMIVSYKDREEDRRRGLEAGADYYLAKGSFHDEALLDAVQD 765 Query: 770 LIGEA 774 LIGEA Sbjct: 766 LIGEA 770 >emb|CCA87286.1| response regulator receiver ATP-binding histidine kinase, cheA family [Ralstonia syzygii R24] Length = 772 Score = 820 bits (2117), Expect = 0.0, Method: Compositional matrix adjust. Identities = 462/785 (58%), Positives = 541/785 (68%), Gaps = 26/785 (3%) Query: 1 MSTPD-LSQMSMLDLFRFEAESQIAQLNASLLALEQQPTAADHLEACMRAGHSLKGAARI 59 MST D + S+L LF EA++Q L+ LL LEQ P LEACMRA HSLKGAARI Sbjct: 1 MSTDDDPGRQSLLALFHEEAQTQGRVLSDGLLTLEQAPADTGALEACMRAAHSLKGAARI 60 Query: 60 VGLEPAVKVAHVLEDCFVLAQQGRLLLQKKHIDVLLRGADLLARIAAP-PDGDEAWADHA 118 +GL+ V VAH +E+ FV AQ+G L L HIDVLLRG DLL R+ P P G AD Sbjct: 61 IGLQDGVDVAHRMEEWFVAAQRGELTLSAGHIDVLLRGTDLLQRLGQPNPAGPVTRAD-- 118 Query: 119 GSAEVQAFLVALPSVMSGGDAAPWPAATSAATSAPAPAAAEPVVAAAAQLPEPELAEPAP 178 V AF+ ++P+ A AA A A AE A P A+ A Sbjct: 119 ----VDAFIASMPASAGASGRAAEDAALRTAL---ARLGAESAALTAGTAGTPRAADVAG 171 Query: 179 VPAAPV-AGAHLTNASGA-----RAVRVSADSLDRLLGLTGESLVESRQLKPFSASMLRM 232 P PV A H G R +RV ADSLDRLL L+GESLVESR LKPF+ SMLR+ Sbjct: 172 APLVPVTADDHSIVPPGNARDPQRMLRVRADSLDRLLSLSGESLVESRWLKPFAESMLRV 231 Query: 233 KRTQREAMQALDLLQQKLATTQLDEFAQTAFAELRTLMQQNQQLLGEQLSALDAFDRRSV 292 KRT RE ALD ++L +LD A A +R ++ QQ LGE + LD FDRRS Sbjct: 232 KRTHRETAHALDACYERL-VERLDPDAHAALNAVRQMLGSLQQALGEHVDELDRFDRRST 290 Query: 293 NLSQRLYDEALACRMRPFADGTAGLARMVRDVGNTLGKSVRLDIVGNTTQIDRDILEKLE 352 L+Q+LYDEAL CRMRPF D T R+VRD+ +LGK VR + G TTQ+DRDIL+ L+ Sbjct: 291 GLAQQLYDEALQCRMRPFGDATHAYPRLVRDLARSLGKRVRFVVAGETTQVDRDILDLLD 350 Query: 353 APIGHLLRNAVDHGIESSAQRRAAGKPEQGVIRLEARHSAGMLLIEVADDGAGIDIEQVR 412 AP+GHLLRNA+DHGIE QR A GKP + + LEARHSAG LLI VADDGAGID+E VR Sbjct: 351 APLGHLLRNAIDHGIEPPEQRAALGKPAEAAVTLEARHSAGKLLIIVADDGAGIDLEAVR 410 Query: 413 RAVVARGLSNQETAERLSEAELLEFLLLPSFSLRDTVTEISGRGVGLDVVADMLKQVRGT 472 AVV RGL++ ETA RLS+ EL EFLLLP FS+RD VT++SGRGVGLD V +M+K VRGT Sbjct: 411 AAVVRRGLADPETAGRLSDHELFEFLLLPGFSMRDRVTDVSGRGVGLDAVHEMVKAVRGT 470 Query: 473 IRITTQAGQGSRFLMQLPLTLSVIRSLLVDISGEPYAFPLAYVNRTLRLPAEALQTLEGY 532 +RI + G+G+RF++QLPLTLSVIRSLLVD+ GE YAFPLA+V RTL L + LEG Sbjct: 471 VRIHNEPGRGARFVLQLPLTLSVIRSLLVDVGGEAYAFPLAHVRRTLELSRNGIDMLEGQ 530 Query: 533 QHFSHGGRQVGLVSAHQVLQKGQWRSRDG---SVCVVVIGEQEHTYGLAVDAFLGERMLV 589 QHF GR VGLV AHQ+ R+ DG S VVVIGE TYG+AVD FLGERMLV Sbjct: 531 QHFPFEGRPVGLVMAHQLFGT---RAPDGARESAAVVVIGEGAETYGIAVDRFLGERMLV 587 Query: 590 VQPLDPRLGKIADVLAGALMEDGTPLLILDVADMLRTVEKLTSSGRLQTVDQDGAAPTTT 649 VQPLD RLGK+ D+ A ALME+G +LI+DV D+LR+V++L GRL V + A T Sbjct: 588 VQPLDARLGKVRDIAAAALMENGEAVLIVDVDDLLRSVDRLVRGGRLDKVQRGQGA--TV 645 Query: 650 AARKKVLVVDDSLTVRELERKLLTNRGYQVTVAVDGMDGWNAVRADRFDLVITDIDMPRM 709 RK VLVVDDSLTVRELERKLL RGY VTVAVDGMDGWNA+R FDLV+TDIDMPRM Sbjct: 646 QHRKHVLVVDDSLTVRELERKLLEKRGYAVTVAVDGMDGWNALRGTPFDLVVTDIDMPRM 705 Query: 710 DGIELVSLIRGAANLQSLPVMIVSYKDREEDRQRGLEAGADHYFTKSSFHDESLLQAVTD 769 DGIELV+LI+ A L++LPVMIVSYKDREEDR RGLEAGAD+Y K SFHDE+LL AV D Sbjct: 706 DGIELVTLIKRDAALKALPVMIVSYKDREEDRHRGLEAGADYYLAKGSFHDEALLDAVQD 765 Query: 770 LIGEA 774 LIGEA Sbjct: 766 LIGEA 770 >ref|YP_001861515.1| CheA signal transduction histidine kinase [Burkholderia phymatum STM815] gb|ACC74469.1| CheA signal transduction histidine kinase [Burkholderia phymatum STM815] Length = 760 Score = 818 bits (2112), Expect = 0.0, Method: Compositional matrix adjust. Identities = 445/776 (57%), Positives = 551/776 (71%), Gaps = 18/776 (2%) Query: 1 MSTPDLSQMSMLDLFRFEAESQIAQLNASLLALEQQPTAADHLEACMRAGHSLKGAARIV 60 M+ DLS+ S+LDLFR EA +Q L+ LLALEQ+P A L ACMRA HSLKGAARI+ Sbjct: 1 MTDDDLSRQSLLDLFREEAGAQTRVLSDGLLALEQRPADAAALVACMRAAHSLKGAARII 60 Query: 61 GLEPAVKVAHVLEDCFVLAQQGRLLLQKKHIDVLLRGADLLARIA-APPDGDEAWADHAG 119 GL+ V +AH++E+CFV AQ+G LLL HIDVLLRG DLL R+ A P+ A AD Sbjct: 61 GLQDGVDIAHLMEECFVGAQRGELLLTPAHIDVLLRGVDLLLRVGEAKPEAPVARAD--- 117 Query: 120 SAEVQAFLVALPSVMSGGDAAPWPAATSAATSAPAPAAAEPVVAAAAQLPEPELAEPAPV 179 + AF+ L S G A PA AA + A A L + E A PA Sbjct: 118 ---IDAFVRRLSSPEHG---AHEPAVQQAADAGSDVYAQIQAQLQADALAQREEAAPADP 171 Query: 180 PAAPVAGAHLTNASGARAVRVSADSLDRLLGLTGESLVESRQLKPFSASMLRMKRTQREA 239 P A H R +RV A +LDR+L L+GE+LVESR+LKPF++SMLRMKRT RE Sbjct: 172 IEKPDAARH-----ADRMLRVRAANLDRVLSLSGEALVESRRLKPFASSMLRMKRTHRET 226 Query: 240 MQALDLLQQKLATTQLDEFAQTAFAELRTLMQQNQQLLGEQLSALDAFDRRSVNLSQRLY 299 ALD L LA LDE A +A A++R+ + QQ LG ++ LD ++R S NL+QRLY Sbjct: 227 SLALDALYDTLAV-HLDEAALSALADVRSALNGMQQTLGARIDELDHYERSSANLAQRLY 285 Query: 300 DEALACRMRPFADGTAGLARMVRDVGNTLGKSVRLDIVGNTTQIDRDILEKLEAPIGHLL 359 DEAL CRMRPF D T R+VRD+ +LGK V +IVG +TQ+DRDIL+ L+AP+GHLL Sbjct: 286 DEALQCRMRPFGDATHAYPRVVRDLARSLGKRVTFEIVGTSTQVDRDILDMLDAPLGHLL 345 Query: 360 RNAVDHGIESSAQRRAAGKPEQGVIRLEARHSAGMLLIEVADDGAGIDIEQVRRAVVARG 419 RNA+DHGIE QR A+GKP + + LEARHSAG LLI V+DDGAGID+++VR AV+ R Sbjct: 346 RNAIDHGIERPEQRVASGKPAEAHVTLEARHSAGKLLISVSDDGAGIDLDEVRAAVIRRK 405 Query: 420 LSNQETAERLSEAELLEFLLLPSFSLRDTVTEISGRGVGLDVVADMLKQVRGTIRITTQA 479 L++ +TA LSE ELL+FLLLP FS+R+ VT++SGRGVGLD V +M+K VRGT+RI Sbjct: 406 LADADTAASLSEQELLDFLLLPGFSMREQVTDVSGRGVGLDAVHEMVKAVRGTVRIVNDP 465 Query: 480 GQGSRFLMQLPLTLSVIRSLLVDISGEPYAFPLAYVNRTLRLPAEALQTLEGYQHFSHGG 539 G+GSRF+MQLPLTLSV+RSLLVD+ GE YAFPLA+V RTL L + LEG QHF+ G Sbjct: 466 GKGSRFVMQLPLTLSVVRSLLVDVGGEAYAFPLAHVRRTLELARTDIDMLEGQQHFAFDG 525 Query: 540 RQVGLVSAHQVLQKGQWRSRDGSVCVVVIGEQEHTYGLAVDAFLGERMLVVQPLDPRLGK 599 + VGLV+AHQ+L + SV VVVIG++ TYG+AVD F+GERMLVVQPLD RLGK Sbjct: 526 KPVGLVTAHQLLGAQAAGAARESVAVVVIGDERETYGIAVDRFVGERMLVVQPLDARLGK 585 Query: 600 IADVLAGALMEDGTPLLILDVADMLRTVEKLTSSGRLQTVDQDGAAPTTTAARKKVLVVD 659 I D+ A AL+++G +LI+DV D+LR+V+KL G+L + + RK VLVV+ Sbjct: 586 IRDIAAAALVDNGDAVLIVDVDDLLRSVDKLVRGGQLDKIGR--VHDVAARQRKHVLVVE 643 Query: 660 DSLTVRELERKLLTNRGYQVTVAVDGMDGWNAVRADRFDLVITDIDMPRMDGIELVSLIR 719 DSLTVRELERKLL RGY VTVAVDGMDGWNA+R+ +DLV+TDIDMPRMDGIELV+LI+ Sbjct: 644 DSLTVRELERKLLEKRGYAVTVAVDGMDGWNALRSGHYDLVVTDIDMPRMDGIELVTLIK 703 Query: 720 GAANLQSLPVMIVSYKDREEDRQRGLEAGADHYFTKSSFHDESLLQAVTDLIGEAT 775 + +PVMIVSYKDR+EDR+RGLEAGAD+Y K SFHDE+LL AV DLIGEA Sbjct: 704 RDPVFKPVPVMIVSYKDRDEDRRRGLEAGADYYLAKGSFHDEALLDAVRDLIGEAV 759