BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0035.0203.p         (341 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003776412.1| response regulator protein [Herbaspirillum s...   693   0.0  
ref|YP_001351702.1| response regulator/GGDEF domain-containing p...   510   e-142
ref|YP_297849.1| response regulator receiver modulated diguanyla...   435   e-120
ref|YP_586104.1| response regulator of a two-component system [C...   429   e-118
ref|YP_004753023.1| two-component response regulator [Collimonas...   420   e-115
ref|YP_003979707.1| response regulator receiver modulated diguan...   417   e-114
gb|EGP43152.1| response regulator receiver modulated diguanylate...   414   e-114
ref|YP_001861513.1| response regulator receiver modulated diguan...   414   e-113
gb|EFV86552.1| signaling/response regulator protein [Achromobact...   411   e-112
ref|YP_001897584.1| response regulator receiver modulated diguan...   409   e-112

>ref|YP_003776412.1| response regulator protein [Herbaspirillum seropedicae SmR1]
 gb|ADJ64504.1| response regulator protein [Herbaspirillum seropedicae SmR1]
          Length = 341

 Score =  693 bits (1789), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 341/341 (100%), Positives = 341/341 (100%)

Query: 1   MSSVHTDIPLVSPALPADEYKIMVLLVDDQPMVGEAIRRALANEPHIDFHFCTRAEEALT 60
           MSSVHTDIPLVSPALPADEYKIMVLLVDDQPMVGEAIRRALANEPHIDFHFCTRAEEALT
Sbjct: 1   MSSVHTDIPLVSPALPADEYKIMVLLVDDQPMVGEAIRRALANEPHIDFHFCTRAEEALT 60

Query: 61  VAERTRPTVILQDLVMPGVDGMTLVRQYRASAVLVNVPIIVLSSRDDAVVKRDAFAGGAN 120
           VAERTRPTVILQDLVMPGVDGMTLVRQYRASAVLVNVPIIVLSSRDDAVVKRDAFAGGAN
Sbjct: 61  VAERTRPTVILQDLVMPGVDGMTLVRQYRASAVLVNVPIIVLSSRDDAVVKRDAFAGGAN 120

Query: 121 DYMVKLPDVIELVARIRYHSRSYINLLQRDAAYSALRESQQQLQKSNFELQRLTNTDGLT 180
           DYMVKLPDVIELVARIRYHSRSYINLLQRDAAYSALRESQQQLQKSNFELQRLTNTDGLT
Sbjct: 121 DYMVKLPDVIELVARIRYHSRSYINLLQRDAAYSALRESQQQLQKSNFELQRLTNTDGLT 180

Query: 181 GIANRRYFDDYLGAEWRRARRDGLDLALLLIDVDFFKLYNDNYGHVAGDAVLRQVAEALD 240
           GIANRRYFDDYLGAEWRRARRDGLDLALLLIDVDFFKLYNDNYGHVAGDAVLRQVAEALD
Sbjct: 181 GIANRRYFDDYLGAEWRRARRDGLDLALLLIDVDFFKLYNDNYGHVAGDAVLRQVAEALD 240

Query: 241 SSIQRPADLSARFGGEEFAMILPRTGLDGAHAIAQKVCHLVESLQVPHEGSSVSAWLTVS 300
           SSIQRPADLSARFGGEEFAMILPRTGLDGAHAIAQKVCHLVESLQVPHEGSSVSAWLTVS
Sbjct: 241 SSIQRPADLSARFGGEEFAMILPRTGLDGAHAIAQKVCHLVESLQVPHEGSSVSAWLTVS 300

Query: 301 VGAATLVPQEQQELRELIEAADRRLYLAKQQGRNRVVWQDG 341
           VGAATLVPQEQQELRELIEAADRRLYLAKQQGRNRVVWQDG
Sbjct: 301 VGAATLVPQEQQELRELIEAADRRLYLAKQQGRNRVVWQDG 341


>ref|YP_001351702.1| response regulator/GGDEF domain-containing protein
           [Janthinobacterium sp. Marseille]
 gb|ABR89542.1| response regulator/GGDEF domain protein [Janthinobacterium sp.
           Marseille]
          Length = 341

 Score =  510 bits (1313), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 242/327 (74%), Positives = 286/327 (87%)

Query: 15  LPADEYKIMVLLVDDQPMVGEAIRRALANEPHIDFHFCTRAEEALTVAERTRPTVILQDL 74
           LPA+EYKIMVLLVDDQPMVGEAIRRAL ++P+IDFH+C RA+EAL VAE+T+PTVILQDL
Sbjct: 15  LPAEEYKIMVLLVDDQPMVGEAIRRALLSDPNIDFHYCARADEALRVAEKTKPTVILQDL 74

Query: 75  VMPGVDGMTLVRQYRASAVLVNVPIIVLSSRDDAVVKRDAFAGGANDYMVKLPDVIELVA 134
           VMPGVDG+TLVRQYR +A+  ++PIIVLS+R+DA VKRDAFA G NDYMVKLPD IEL+A
Sbjct: 75  VMPGVDGLTLVRQYRQNAITCDIPIIVLSTREDAEVKRDAFATGVNDYMVKLPDTIELIA 134

Query: 135 RIRYHSRSYINLLQRDAAYSALRESQQQLQKSNFELQRLTNTDGLTGIANRRYFDDYLGA 194
           RIRYHSRSY NLLQRDAAY ALRESQQQLQKSNFELQRLTNTDGLTGIANRRYFDDYL A
Sbjct: 135 RIRYHSRSYNNLLQRDAAYRALRESQQQLQKSNFELQRLTNTDGLTGIANRRYFDDYLSA 194

Query: 195 EWRRARRDGLDLALLLIDVDFFKLYNDNYGHVAGDAVLRQVAEALDSSIQRPADLSARFG 254
           EW+RARR+  +L++LLIDVD FKLYND YGHVAGD VL+QVA++L++S  RPADLSARFG
Sbjct: 195 EWKRARREQQELSILLIDVDNFKLYNDTYGHVAGDLVLKQVAKSLEASAMRPADLSARFG 254

Query: 255 GEEFAMILPRTGLDGAHAIAQKVCHLVESLQVPHEGSSVSAWLTVSVGAATLVPQEQQEL 314
           GEEFA+ILP TG +GA    +KVC  VE+L++PH  +++  WLTVSVGAAT+ PQ +Q  
Sbjct: 255 GEEFAIILPATGSNGAVISGKKVCAAVEALRIPHAHAAIGEWLTVSVGAATITPQAEQVP 314

Query: 315 RELIEAADRRLYLAKQQGRNRVVWQDG 341
            +LIE AD+RLY AK+ G++RV+W+D 
Sbjct: 315 NDLIELADKRLYRAKELGKHRVIWEDA 341


>ref|YP_297849.1| response regulator receiver modulated diguanylate cyclase
           [Ralstonia eutropha JMP134]
 gb|AAZ63005.1| response regulator receiver modulated diguanylate cyclase
           [Ralstonia eutropha JMP134]
          Length = 359

 Score =  435 bits (1119), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 211/333 (63%), Positives = 262/333 (78%)

Query: 5   HTDIPLVSPALPADEYKIMVLLVDDQPMVGEAIRRALANEPHIDFHFCTRAEEALTVAER 64
           +T I  ++    A+ Y +MVLLVDDQ M+GEA+RRALA+EP IDFH+C   ++A+ VAER
Sbjct: 21  NTAITAITDTPAANSYPVMVLLVDDQAMIGEAVRRALASEPDIDFHYCATPDDAVAVAER 80

Query: 65  TRPTVILQDLVMPGVDGMTLVRQYRASAVLVNVPIIVLSSRDDAVVKRDAFAGGANDYMV 124
           TRPTVILQDLVMPGVDG+TLVR+YR +A   ++PIIVLS++++A +K  AF+ GANDY+V
Sbjct: 81  TRPTVILQDLVMPGVDGLTLVRRYRDNAATRDIPIIVLSTKEEAAMKSAAFSAGANDYLV 140

Query: 125 KLPDVIELVARIRYHSRSYINLLQRDAAYSALRESQQQLQKSNFELQRLTNTDGLTGIAN 184
           KLPD IELVARIRYHSRSY+NLLQRD AY ALR+SQQQL ++N ELQRLTN+DGLTG++N
Sbjct: 141 KLPDSIELVARIRYHSRSYLNLLQRDEAYRALRQSQQQLLETNLELQRLTNSDGLTGLSN 200

Query: 185 RRYFDDYLGAEWRRARRDGLDLALLLIDVDFFKLYNDNYGHVAGDAVLRQVAEALDSSIQ 244
           RRYFD+YL AEW+RA+R+   LALL+IDVD FK YND YGHVAGD VLR+VA  L  +  
Sbjct: 201 RRYFDEYLNAEWKRAQREQSQLALLMIDVDAFKAYNDTYGHVAGDEVLRRVAAVLRDNCS 260

Query: 245 RPADLSARFGGEEFAMILPRTGLDGAHAIAQKVCHLVESLQVPHEGSSVSAWLTVSVGAA 304
           RPADL ARFGGEEF+M+LP T   GA   A+KV   +ESL + H G+    +LTVS+GAA
Sbjct: 261 RPADLPARFGGEEFSMVLPSTSPGGARLFAEKVRRAIESLGIAHSGADTGGFLTVSIGAA 320

Query: 305 TLVPQEQQELRELIEAADRRLYLAKQQGRNRVV 337
            LVP++ Q    L+E AD  LY AK+ GRN+VV
Sbjct: 321 VLVPEDGQPSSRLVEVADAGLYEAKRNGRNQVV 353


>ref|YP_586104.1| response regulator of a two-component system [Cupriavidus
           metallidurans CH34]
 gb|ABF10835.1| putative response regulator of a two-component system [Cupriavidus
           metallidurans CH34]
          Length = 335

 Score =  429 bits (1103), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 206/319 (64%), Positives = 255/319 (79%)

Query: 19  EYKIMVLLVDDQPMVGEAIRRALANEPHIDFHFCTRAEEALTVAERTRPTVILQDLVMPG 78
           EY  MVLLVDDQ ++GEAIRRALA+E  IDFH+C++ EEA+TVAERT+PTVILQDLVMPG
Sbjct: 15  EYPAMVLLVDDQAIIGEAIRRALASESDIDFHYCSQPEEAVTVAERTKPTVILQDLVMPG 74

Query: 79  VDGMTLVRQYRASAVLVNVPIIVLSSRDDAVVKRDAFAGGANDYMVKLPDVIELVARIRY 138
            DG+TLVR+YR +A   ++PIIVLS++++  +K  AFA GANDY+VKLPD IEL+ARIRY
Sbjct: 75  TDGLTLVRRYRENATTRDIPIIVLSTKEEPTMKSAAFAAGANDYLVKLPDSIELIARIRY 134

Query: 139 HSRSYINLLQRDAAYSALRESQQQLQKSNFELQRLTNTDGLTGIANRRYFDDYLGAEWRR 198
           HSRSY+NLLQRD AY ALR+SQQQL ++N ELQRLTN+DGLT ++NRRYFD+YLGAEW+R
Sbjct: 135 HSRSYLNLLQRDEAYRALRQSQQQLLETNLELQRLTNSDGLTSLSNRRYFDEYLGAEWKR 194

Query: 199 ARRDGLDLALLLIDVDFFKLYNDNYGHVAGDAVLRQVAEALDSSIQRPADLSARFGGEEF 258
           A+R+   LALL+IDVD FK YND YGHVAGD VLR+VA  +  +  RPADL ARFGGEEF
Sbjct: 195 AQREQTQLALLMIDVDAFKGYNDTYGHVAGDEVLRRVAAVIRENCARPADLPARFGGEEF 254

Query: 259 AMILPRTGLDGAHAIAQKVCHLVESLQVPHEGSSVSAWLTVSVGAATLVPQEQQELRELI 318
           +MILP T   GA  +A+KV   +E+L++PH  S    ++TVS+G A +VP    +   LI
Sbjct: 255 SMILPATSPGGARLLAEKVRRAIETLRIPHACSPTGGFVTVSIGGAVIVPGGDADFSRLI 314

Query: 319 EAADRRLYLAKQQGRNRVV 337
           EAAD  LY AK+ GRN+VV
Sbjct: 315 EAADAGLYQAKRNGRNQVV 333


>ref|YP_004753023.1| two-component response regulator [Collimonas fungivorans Ter331]
 gb|AEK62200.1| Two-component response regulator [Collimonas fungivorans Ter331]
          Length = 336

 Score =  420 bits (1079), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 202/321 (62%), Positives = 249/321 (77%)

Query: 16  PADEYKIMVLLVDDQPMVGEAIRRALANEPHIDFHFCTRAEEALTVAERTRPTVILQDLV 75
           P D+Y +MVLLVDDQ MVGEA+RRALAN+ +IDFH+C   +EA+  A++TRPTVILQDLV
Sbjct: 12  PPDDYPVMVLLVDDQAMVGEAVRRALANQINIDFHYCAHPDEAIEAAQKTRPTVILQDLV 71

Query: 76  MPGVDGMTLVRQYRASAVLVNVPIIVLSSRDDAVVKRDAFAGGANDYMVKLPDVIELVAR 135
           MPG+DG+TLVRQYRA+    NVPIIVLS+R+D  VK  AF  GANDY+VKLPD IELVAR
Sbjct: 72  MPGIDGLTLVRQYRANPATRNVPIIVLSTREDPAVKSAAFTAGANDYLVKLPDTIELVAR 131

Query: 136 IRYHSRSYINLLQRDAAYSALRESQQQLQKSNFELQRLTNTDGLTGIANRRYFDDYLGAE 195
           IRYHSRSY+NLLQRD AY ALR+SQQQL ++N ELQRLTN+DGLTG+ANRRYFD+Y  AE
Sbjct: 132 IRYHSRSYVNLLQRDEAYRALRQSQQQLLETNLELQRLTNSDGLTGLANRRYFDEYFSAE 191

Query: 196 WRRARRDGLDLALLLIDVDFFKLYNDNYGHVAGDAVLRQVAEALDSSIQRPADLSARFGG 255
           W+RA R+   L+LL+IDVD FKLYND YGH+AGD  L+QVAE++    +RP DL+AR GG
Sbjct: 192 WKRAEREQSSLSLLMIDVDDFKLYNDTYGHLAGDTALKQVAESIGHFARRPTDLAARIGG 251

Query: 256 EEFAMILPRTGLDGAHAIAQKVCHLVESLQVPHEGSSVSAWLTVSVGAATLVPQEQQELR 315
           EEF ++LP    +     A K+   V +L + H  SS  A +TVSVG A++VPQ      
Sbjct: 252 EEFVLVLPSMSREHMEIQADKLQAAVHALGIAHASSSNDARVTVSVGGASMVPQRGSSQE 311

Query: 316 ELIEAADRRLYLAKQQGRNRV 336
           +L+EAAD+ LY AK+ G+NRV
Sbjct: 312 KLVEAADQALYRAKRGGKNRV 332


>ref|YP_003979707.1| response regulator receiver modulated diguanylate cyclase
           [Achromobacter xylosoxidans A8]
 gb|ADP16992.1| response regulator receiver modulated diguanylate cyclase
           [Achromobacter xylosoxidans A8]
          Length = 337

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 201/320 (62%), Positives = 253/320 (79%)

Query: 18  DEYKIMVLLVDDQPMVGEAIRRALANEPHIDFHFCTRAEEALTVAERTRPTVILQDLVMP 77
           + +  MVLLVDDQ MVGEAIRRALA E +IDFH+C+  E+AL VA +TRPTVILQDLV+P
Sbjct: 14  NSHAAMVLLVDDQVMVGEAIRRALATEGNIDFHYCSDPEKALAVAIQTRPTVILQDLVLP 73

Query: 78  GVDGMTLVRQYRASAVLVNVPIIVLSSRDDAVVKRDAFAGGANDYMVKLPDVIELVARIR 137
           GVDG++LV++YR   V  ++PIIVLS+++D  +K  AFA GANDY+VKLPD IELVARIR
Sbjct: 74  GVDGLSLVQEYRGHPVTRDIPIIVLSTKEDPAIKSAAFAAGANDYLVKLPDSIELVARIR 133

Query: 138 YHSRSYINLLQRDAAYSALRESQQQLQKSNFELQRLTNTDGLTGIANRRYFDDYLGAEWR 197
           YHSRSY+ L+QRD AY ALR+SQQQL +SN EL+RLTN+DGLTG+ NRRYFD+YL AEW+
Sbjct: 134 YHSRSYLALVQRDEAYQALRQSQQQLLESNMELRRLTNSDGLTGLGNRRYFDEYLNAEWQ 193

Query: 198 RARRDGLDLALLLIDVDFFKLYNDNYGHVAGDAVLRQVAEALDSSIQRPADLSARFGGEE 257
           RARRDG ++++L+IDVD FK YND YGH+AGD  L++VA  + +S  R  DL+ARFGGEE
Sbjct: 194 RARRDGREISMLMIDVDHFKAYNDTYGHIAGDEALKRVANTIFASCDRSTDLAARFGGEE 253

Query: 258 FAMILPRTGLDGAHAIAQKVCHLVESLQVPHEGSSVSAWLTVSVGAATLVPQEQQELREL 317
           FA++LP T    A   A+K+   VE+LQ+P + +    WLTVS+G AT VPQ +Q   +L
Sbjct: 254 FALVLPGTPAGSARLAAEKLRRAVEALQIPQKDTGDGPWLTVSIGTATAVPQGEQPCTDL 313

Query: 318 IEAADRRLYLAKQQGRNRVV 337
           I+ ADR LY AK+QGRNRVV
Sbjct: 314 IQVADRGLYQAKRQGRNRVV 333


>gb|EGP43152.1| response regulator receiver modulated diguanylate cyclase
           [Achromobacter xylosoxidans AXX-A]
          Length = 337

 Score =  414 bits (1065), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 204/330 (61%), Positives = 255/330 (77%), Gaps = 1/330 (0%)

Query: 9   PLVSPA-LPADEYKIMVLLVDDQPMVGEAIRRALANEPHIDFHFCTRAEEALTVAERTRP 67
           P  SPA    + +  MVLLVDDQ MVGEAIRRALA E +IDFH+C+   +ALTVA +TRP
Sbjct: 4   PFDSPASADLNSHAAMVLLVDDQVMVGEAIRRALATEGNIDFHYCSDPYKALTVAVQTRP 63

Query: 68  TVILQDLVMPGVDGMTLVRQYRASAVLVNVPIIVLSSRDDAVVKRDAFAGGANDYMVKLP 127
           TVILQDLV+PGVDG++LV++YR+  V  ++PIIVLS+++D  +K  AFA GANDY+VKLP
Sbjct: 64  TVILQDLVLPGVDGLSLVQEYRSHPVTRDIPIIVLSTKEDPAIKSAAFAAGANDYLVKLP 123

Query: 128 DVIELVARIRYHSRSYINLLQRDAAYSALRESQQQLQKSNFELQRLTNTDGLTGIANRRY 187
           D IELVARIRYHSRSY+ L+QRD AY ALR+SQQQL +SN EL+RLTN+DGLTG+ NRRY
Sbjct: 124 DSIELVARIRYHSRSYLALVQRDEAYQALRQSQQQLLESNMELRRLTNSDGLTGLGNRRY 183

Query: 188 FDDYLGAEWRRARRDGLDLALLLIDVDFFKLYNDNYGHVAGDAVLRQVAEALDSSIQRPA 247
           FD+YL AEW RARRDG ++++L+IDVD FK YND YGH+AGD  L++VA  + +S  R  
Sbjct: 184 FDEYLNAEWLRARRDGREISMLMIDVDHFKSYNDTYGHIAGDEALKRVANTIFASCDRST 243

Query: 248 DLSARFGGEEFAMILPRTGLDGAHAIAQKVCHLVESLQVPHEGSSVSAWLTVSVGAATLV 307
           DL+ARFGGEEFA++LP T    A   A+K+   VE++Q+P + S+   WLTVS+G AT V
Sbjct: 244 DLAARFGGEEFALVLPGTPSGSARLAAEKLRRAVEAMQIPQKDSNGGPWLTVSIGTATAV 303

Query: 308 PQEQQELRELIEAADRRLYLAKQQGRNRVV 337
           P   Q   +LI+ ADR LY AK QGRNRVV
Sbjct: 304 PAADQPCTDLIQVADRGLYQAKNQGRNRVV 333


>ref|YP_001861513.1| response regulator receiver modulated diguanylate cyclase
           [Burkholderia phymatum STM815]
 gb|ACC74467.1| response regulator receiver modulated diguanylate cyclase
           [Burkholderia phymatum STM815]
          Length = 372

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 198/320 (61%), Positives = 248/320 (77%)

Query: 22  IMVLLVDDQPMVGEAIRRALANEPHIDFHFCTRAEEALTVAERTRPTVILQDLVMPGVDG 81
           IMVLLVDDQ +V EA+RRALANE  ID H+C  A+EA+  A  TRPTVILQDLVMPG+DG
Sbjct: 43  IMVLLVDDQAIVAEAVRRALANEEGIDLHYCASADEAIRAATHTRPTVILQDLVMPGIDG 102

Query: 82  MTLVRQYRASAVLVNVPIIVLSSRDDAVVKRDAFAGGANDYMVKLPDVIELVARIRYHSR 141
           +TLV+ YRA+  L NVPIIVLS++++  +K  AFA GANDY+VKLPD IELVARIRYHSR
Sbjct: 103 LTLVKAYRANTKLRNVPIIVLSTKEEPTIKSAAFAAGANDYLVKLPDRIELVARIRYHSR 162

Query: 142 SYINLLQRDAAYSALRESQQQLQKSNFELQRLTNTDGLTGIANRRYFDDYLGAEWRRARR 201
           SY+NLLQRD AY ALRESQQQL ++N EL++LT +DGLTG++NRRY D+YL AEWRR  R
Sbjct: 163 SYVNLLQRDEAYRALRESQQQLLEANLELRKLTQSDGLTGLSNRRYLDEYLNAEWRRGMR 222

Query: 202 DGLDLALLLIDVDFFKLYNDNYGHVAGDAVLRQVAEALDSSIQRPADLSARFGGEEFAMI 261
              +++LL++DVD FK YND YGHVAGD VL+Q+A  ++  + RP DL+ARFGGEEFA++
Sbjct: 223 AQSEVSLLMLDVDNFKPYNDTYGHVAGDEVLKQIASTVEGCLGRPGDLAARFGGEEFAVV 282

Query: 262 LPRTGLDGAHAIAQKVCHLVESLQVPHEGSSVSAWLTVSVGAATLVPQEQQELRELIEAA 321
           LP T   G   +A+K+   VE+L++PH GSS   ++TVSVG ATLVP    ++  LIE A
Sbjct: 283 LPGTAAGGTRLLAEKIRLEVEALRIPHAGSSSGNYVTVSVGCATLVPAPDAQMTTLIETA 342

Query: 322 DRRLYLAKQQGRNRVVWQDG 341
           D  LY AK+ G+NRV   +G
Sbjct: 343 DLALYRAKRDGKNRVAAMEG 362


>gb|EFV86552.1| signaling/response regulator protein [Achromobacter xylosoxidans
           C54]
          Length = 351

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 203/330 (61%), Positives = 256/330 (77%), Gaps = 1/330 (0%)

Query: 9   PLVSPA-LPADEYKIMVLLVDDQPMVGEAIRRALANEPHIDFHFCTRAEEALTVAERTRP 67
           P+ SPA    + +  MVLLVDDQ MVGEAIRRALA E +IDFH+C+   +ALTVA +TRP
Sbjct: 4   PIDSPASADLNSHAAMVLLVDDQVMVGEAIRRALATEGNIDFHYCSDPYKALTVAVQTRP 63

Query: 68  TVILQDLVMPGVDGMTLVRQYRASAVLVNVPIIVLSSRDDAVVKRDAFAGGANDYMVKLP 127
           TVILQDLV+PGVDG++LV++YR+  V  ++PIIVLS+++D  +K  AFA GANDY+VKLP
Sbjct: 64  TVILQDLVLPGVDGLSLVQEYRSHPVTRDIPIIVLSTKEDPAIKSAAFAAGANDYLVKLP 123

Query: 128 DVIELVARIRYHSRSYINLLQRDAAYSALRESQQQLQKSNFELQRLTNTDGLTGIANRRY 187
           D IELVARIRYHSRSY+ L+QRD AY ALR+SQQQL +SN EL+RLTN+DGLTG+ NRRY
Sbjct: 124 DSIELVARIRYHSRSYLALVQRDEAYQALRQSQQQLLESNMELRRLTNSDGLTGLGNRRY 183

Query: 188 FDDYLGAEWRRARRDGLDLALLLIDVDFFKLYNDNYGHVAGDAVLRQVAEALDSSIQRPA 247
           FD+YL AEW RARRDG ++++L+IDVD FK YND YGH+AGD  L++VA  + +S  R  
Sbjct: 184 FDEYLNAEWLRARRDGREISMLMIDVDHFKSYNDTYGHIAGDEALKRVANTIFASCDRST 243

Query: 248 DLSARFGGEEFAMILPRTGLDGAHAIAQKVCHLVESLQVPHEGSSVSAWLTVSVGAATLV 307
           DL+ARFGGEEFA++LP T    A   A+K+   VE++Q+P + +    WLTVS+G AT V
Sbjct: 244 DLAARFGGEEFALVLPGTPAGSARLAAEKLRRAVEAMQIPQKDNGGGPWLTVSIGTATAV 303

Query: 308 PQEQQELRELIEAADRRLYLAKQQGRNRVV 337
           P   Q   +LI+ ADR LY AK+QGRNRVV
Sbjct: 304 PVVDQPCTDLIQIADRGLYQAKRQGRNRVV 333


>ref|YP_001897584.1| response regulator receiver modulated diguanylate cyclase
           [Burkholderia phytofirmans PsJN]
 gb|ACD18360.1| response regulator receiver modulated diguanylate cyclase
           [Burkholderia phytofirmans PsJN]
          Length = 362

 Score =  409 bits (1050), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 198/325 (60%), Positives = 250/325 (76%), Gaps = 1/325 (0%)

Query: 16  PADEYKIMVLLVDDQPMVGEAIRRALANEPHIDFHFCTRAEEALTVAERTRPTVILQDLV 75
           PA E  IMVLLVDDQ ++ EAIR+ALA+EP +DFH+C   EEAL  A  TR TVILQDLV
Sbjct: 39  PAAECPIMVLLVDDQAIIAEAIRQALADEPSVDFHYCASPEEALRSAAETRATVILQDLV 98

Query: 76  MPGVDGMTLVRQYRASAVLVNVPIIVLSSRDDAVVKRDAFAGGANDYMVKLPDVIELVAR 135
           MPG DG+TLVRQYR +A   ++PIIVLS++++ +VK  AFA GANDY+VKLPD IEL+AR
Sbjct: 99  MPGTDGLTLVRQYRQNAATRDIPIIVLSTKEEPLVKSAAFAAGANDYLVKLPDRIELIAR 158

Query: 136 IRYHSRSYINLLQRDAAYSALRESQQQLQKSNFELQRLTNTDGLTGIANRRYFDDYLGAE 195
           IRYHSRSY+NL+QRD AY ALR+SQQQL  +N ELQRLT++DGLTG++NRRY D YL AE
Sbjct: 159 IRYHSRSYLNLIQRDEAYRALRQSQQQLLATNLELQRLTHSDGLTGLSNRRYLDQYLAAE 218

Query: 196 WRRARRDGLDLALLLIDVDFFKLYNDNYGHVAGDAVLRQVAEALDSSIQRPADLSARFGG 255
           WRR+ R+   L  L+IDVD FK YND YGHVAGD VL+ VA  ++S + RPADL+ARFGG
Sbjct: 219 WRRSTREKTGLGFLMIDVDNFKAYNDTYGHVAGDEVLKTVAHTVESCLGRPADLAARFGG 278

Query: 256 EEFAMILPRTGLDGAHAIAQKVCHLVESLQVPHEGSSVSAWLTVSVGAATLVPQEQQELR 315
           EEFA+++P T   G   +A+K+   +E L +PH GS+ +  +T+S+GAATLVP   + + 
Sbjct: 279 EEFAVVVPGTSSGGLRLLAEKIRIAIEGLAIPHSGSA-TGIVTISIGAATLVPTVAEPVT 337

Query: 316 ELIEAADRRLYLAKQQGRNRVVWQD 340
           +LIEAAD  LY AK+ G+N+V   D
Sbjct: 338 KLIEAADVGLYRAKRDGKNQVAVSD 362