BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0035.0184.p (607 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776395.1| poly(3-hydroxyalkanoate) synthetase [Herbasp... 1206 0.0 ref|YP_004752430.1| polyhydroxyalkanoic acid synthase [Collimona... 799 0.0 ref|YP_001353086.1| poly-beta-hydroxybutyrate polymerase [Janthi... 721 0.0 ref|ZP_08273177.1| Polyhydroxyalkanoic acid synthase [Oxalobacte... 720 0.0 ref|YP_001100197.1| Poly-beta-hydroxybutyrate polymerase [Hermin... 707 0.0 gb|AAB06755.1| PHB polymerase [Zoogloea ramigera] 689 0.0 gb|ADY39738.1| PHA synthase [uncultured bacterium] 672 0.0 ref|YP_003745545.1| polyhydroxyalkanoic acid synthase [Ralstonia... 662 0.0 ref|ZP_00942942.1| Poly(3-hydroxyalkanoate) polymerase [Ralstoni... 660 0.0 ref|YP_001791119.1| poly(R)-hydroxyalkanoic acid synthase, class... 660 0.0 >ref|YP_003776395.1| poly(3-hydroxyalkanoate) synthetase [Herbaspirillum seropedicae SmR1] gb|ADJ64487.1| poly(3-hydroxyalkanoate) synthetase protein [Herbaspirillum seropedicae SmR1] Length = 588 Score = 1206 bits (3121), Expect = 0.0, Method: Compositional matrix adjust. Identities = 584/588 (99%), Positives = 585/588 (99%) Query: 20 MSDPKFWTALQSQFQSQFAQFKPPAQAFPGFAAMGAPPAGSQVDPTAFLKQLADNGATID 79 MSDPKFWTALQSQFQSQFA FKPPAQAFPGFAAMGAPPAGSQVDPTAFLKQLADNGATID Sbjct: 1 MSDPKFWTALQSQFQSQFAPFKPPAQAFPGFAAMGAPPAGSQVDPTAFLKQLADNGATID 60 Query: 80 PAELVRLQQDYTQQFGALWQSMLAAKTPAITDRRLSAPAWQEHPYFAFQAAAYQLNSRFL 139 PAELVRLQQDYTQQFGALWQSMLAAKTPAITDRRLSAPAWQEHPYFAFQAAAYQLNSRFL Sbjct: 61 PAELVRLQQDYTQQFGALWQSMLAAKTPAITDRRLSAPAWQEHPYFAFQAAAYQLNSRFL 120 Query: 140 LALADAVQGSEKVRHKLRFAVQQMIDAMSPANFLATNPVAQQKILETRGESLTKGIAQLL 199 LALADAVQGSEKVRHKLRFAVQQMIDAMSPANFLATNPVAQQKILETRGESLTKGIAQLL Sbjct: 121 LALADAVQGSEKVRHKLRFAVQQMIDAMSPANFLATNPVAQQKILETRGESLTKGIAQLL 180 Query: 200 ADLQKGHVSQTDETAFEVGRDVGASEGSVIFENELFQLIQYKPLTKTVHEVPLLIVPPCI 259 ADLQKGHVSQTDETAFEVGRDVGASEGSVIFENELFQLIQYKPLTKTVHEVPLLIVPPCI Sbjct: 181 ADLQKGHVSQTDETAFEVGRDVGASEGSVIFENELFQLIQYKPLTKTVHEVPLLIVPPCI 240 Query: 260 NKFYILDLQPHNSLVRYTVEQGHTVFLISWRNADAAVETATWDQYVDDAVVRSIHIVQEI 319 NKFYILDLQPHNSLVRYTVEQGHTVFLISWRNADAAVETATWDQYVDDAVVRSIHIVQEI Sbjct: 241 NKFYILDLQPHNSLVRYTVEQGHTVFLISWRNADAAVETATWDQYVDDAVVRSIHIVQEI 300 Query: 320 SKQPQINALGFCVGGTILSCALALLAARGEDPVASLTLLTTFLDFSDTGAIDVYIDEMQL 379 SKQPQINALGFCVGGTILSCALALLAARGEDPVASLTLLTTFLDFSDTGAIDVYIDEMQL Sbjct: 301 SKQPQINALGFCVGGTILSCALALLAARGEDPVASLTLLTTFLDFSDTGAIDVYIDEMQL 360 Query: 380 ALREQMIGQRGLMAGRDFASAFSSLRPNDLLWNYVESNYLKGEKPSAFDLLYWNADSTNL 439 ALREQMIGQRGLMAGRDFASAFSSLRPNDLLWNYVESNYLKGEKPSAFDLLYWNADSTNL Sbjct: 361 ALREQMIGQRGLMAGRDFASAFSSLRPNDLLWNYVESNYLKGEKPSAFDLLYWNADSTNL 420 Query: 440 PGPMFCYYLRHMYLENALKEPGRLTVGGEKIDLRKINAPAFIYASRDDHIVPWKSAYASL 499 PGPMFCYYLRHMYLENALKEPGRLTVGGEKIDLRKINAPAFIYASRDDHIVPWKSAYASL Sbjct: 421 PGPMFCYYLRHMYLENALKEPGRLTVGGEKIDLRKINAPAFIYASRDDHIVPWKSAYASL 480 Query: 500 GLINTAKRSNNRFVLGASGHIAGVINPASTNKRNYWVNDKAKAGSDADAWLAGATEHPGS 559 GLINTAKRSNNRFVLGASGHIAGVINPAS NKRNYW+NDKAKAGS ADAWLAGATEHPGS Sbjct: 481 GLINTAKRSNNRFVLGASGHIAGVINPASKNKRNYWINDKAKAGSGADAWLAGATEHPGS 540 Query: 560 WWGQWAAFLAKHGGRKVAAPKAAGSTRYKHIEPAPGRYVKVKADQLAA 607 WWGQWAAFLAKHGGRKVAAPKAAGSTRYKHIEPAPGRYVKVKADQLAA Sbjct: 541 WWGQWAAFLAKHGGRKVAAPKAAGSTRYKHIEPAPGRYVKVKADQLAA 588 >ref|YP_004752430.1| polyhydroxyalkanoic acid synthase [Collimonas fungivorans Ter331] gb|AEK61607.1| Polyhydroxyalkanoic acid synthase [Collimonas fungivorans Ter331] Length = 591 Score = 799 bits (2064), Expect = 0.0, Method: Compositional matrix adjust. Identities = 389/589 (66%), Positives = 461/589 (78%), Gaps = 13/589 (2%) Query: 15 AWLAQMSDPKFWTALQSQFQSQFAQFKPPAQAFPGFAAMGAPPAGSQVDPTAFLKQLADN 74 A L+Q+S +F A QF Q + P F GF P A +Q F + Sbjct: 16 AALSQLSQ-QFSQAFNPQFLQQLSHIADPGM-FLGFN----PSAQNQSGAAGF----GEL 65 Query: 75 GATIDPAELVRLQQDYTQQFGALWQSMLAAKTPAITDRRLSAPAWQEHPYFAFQAAAYQL 134 G ++DPA L +LQ +YTQQ ALW+ MLAA+ PAI DRR SA AW +P +AF AAAY L Sbjct: 66 GISLDPAVLEKLQAEYTQQLSALWKDMLAARIPAIADRRFSAAAWHGNPVYAFNAAAYLL 125 Query: 135 NSRFLLALADAVQGSEKVRHKLRFAVQQMIDAMSPANFLATNPVAQQKILETRGESLTKG 194 N+ FL A+ +A++ K++ K+ F VQQMIDAM+P+NFLATNP AQQKI+ET GESLTKG Sbjct: 126 NAHFLTAMVEALEAPPKIKRKIGFTVQQMIDAMAPSNFLATNPAAQQKIVETNGESLTKG 185 Query: 195 IAQLLADLQKGHVSQTDETAFEVGRDVGASEGSVIFENELFQLIQYKPLTKTVHEVPLLI 254 IAQ++AD+ KG VSQTDE+AFEVG+DV +EG+V+FENELFQLIQY PLT V++ PLLI Sbjct: 186 IAQMIADMHKGRVSQTDESAFEVGKDVATTEGAVVFENELFQLIQYTPLTAKVYQRPLLI 245 Query: 255 VPPCINKFYILDLQPHNSLVRYTVEQGHTVFLISWRNADAAVETATWDQYVDDAVVRSIH 314 VPPCINKFYILDLQP NSLVRY VEQGH+VFL+SWRNAD ++ ATWDQYV D +R+I Sbjct: 246 VPPCINKFYILDLQPQNSLVRYAVEQGHSVFLVSWRNADESLAQATWDQYVVDGAIRAIQ 305 Query: 315 IVQEISKQPQINALGFCVGGTILSCALALLAARGEDPVASLTLLTTFLDFSDTGAIDVYI 374 VQ+IS Q +IN LGFCVGGTILS ALA LAA +P+ASLTLLT FLDFSDTG +DVYI Sbjct: 306 AVQDISGQDKINTLGFCVGGTILSTALAKLAAEKNNPIASLTLLTAFLDFSDTGILDVYI 365 Query: 375 DEMQLALREQMIGQRGLMAGRDFASAFSSLRPNDLLWNYVESNYLKGEKPSAFDLLYWNA 434 D+MQ+ +REQ IGQ GLM GR+F SAFSSLRPNDLLWNYVESNYLKGE+P+ FDLLYWNA Sbjct: 366 DDMQIRMREQAIGQGGLMPGREFGSAFSSLRPNDLLWNYVESNYLKGEQPTPFDLLYWNA 425 Query: 435 DSTNLPGPMFCYYLRHMYLENALKEPGRLTVGGEKIDLRKINAPAFIYASRDDHIVPWKS 494 DSTNLPGPMFCYYLRHMYL+N+LK+ RLTVGG+KIDL KI+APAFIYASR+DHIVPW S Sbjct: 426 DSTNLPGPMFCYYLRHMYLDNSLKD-ARLTVGGQKIDLGKIDAPAFIYASREDHIVPWAS 484 Query: 495 AYASLGLINTAKRSNNRFVLGASGHIAGVINPASTNKRNYWVNDKAKAGSDADAWLAGAT 554 AYAS+ L+N K NRFVLGASGHIAGVINP + KR+YW N A DAD WLA A Sbjct: 485 AYASVSLLNPKKPKQNRFVLGASGHIAGVINPPAKKKRSYWTNKAVAA--DADTWLAAAV 542 Query: 555 EHPGSWWGQWAAFLAKHGGRKVAAPKAAGSTRYKHIEPAPGRYVKVKAD 603 EHPGSWW +WA FL++H G++VAAP+ G+T+Y IEPAPGRYVKV+A+ Sbjct: 543 EHPGSWWTEWAEFLSEHAGKQVAAPRKLGNTKYGIIEPAPGRYVKVRAE 591 >ref|YP_001353086.1| poly-beta-hydroxybutyrate polymerase [Janthinobacterium sp. Marseille] gb|ABR89461.1| poly-beta-hydroxybutyrate polymerase [Janthinobacterium sp. Marseille] Length = 562 Score = 721 bits (1861), Expect = 0.0, Method: Compositional matrix adjust. Identities = 332/528 (62%), Positives = 414/528 (78%), Gaps = 1/528 (0%) Query: 75 GATIDPAELVRLQQDYTQQFGALWQSMLAAKTPAITDRRLSAPAWQEHPYFAFQAAAYQL 134 G IDPA +LQ DY QQF LWQ ML+A+ P + D+R + PAWQ AF AAAY L Sbjct: 35 GMGIDPAVATQLQNDYAQQFMTLWQQMLSAQVPPVADKRFADPAWQSSTMHAFNAAAYLL 94 Query: 135 NSRFLLALADAVQGSEKVRHKLRFAVQQMIDAMSPANFLATNPVAQQKILETRGESLTKG 194 N++FL A+ADAVQ K + K+RFA++QM++AMSPANFL +NP AQQK++ET+G SLT G Sbjct: 95 NAKFLAAMADAVQVPPKAKQKIRFAIEQMVNAMSPANFLFSNPEAQQKLIETKGASLTNG 154 Query: 195 IAQLLADLQKGHVSQTDETAFEVGRDVGASEGSVIFENELFQLIQYKPLTKTVHEVPLLI 254 + L D+QKG +SQ+DETAFEVGR+V +EG+V+FENELFQL+QYKPLT TV+E PLL+ Sbjct: 155 LKHLFEDMQKGRISQSDETAFEVGRNVAITEGAVVFENELFQLLQYKPLTPTVYERPLLL 214 Query: 255 VPPCINKFYILDLQPHNSLVRYTVEQGHTVFLISWRNADAAVETATWDQYVDDAVVRSIH 314 VPPCINK+YILDLQ HNS VRY VEQGHTVFLISWRNADA++ ATW+ Y++D V++++H Sbjct: 215 VPPCINKYYILDLQAHNSFVRYAVEQGHTVFLISWRNADASIAHATWNDYIEDGVLQAMH 274 Query: 315 IVQEISKQPQINALGFCVGGTILSCALALLAARGEDPVASLTLLTTFLDFSDTGAIDVYI 374 + + I++Q +IN LGFCVGGT+L+ ALAL ARGE+P ASLTLLTTFLDFSDTG +DVYI Sbjct: 275 VAKAITRQEKINVLGFCVGGTMLTNALALACARGEEPAASLTLLTTFLDFSDTGILDVYI 334 Query: 375 DEMQLALREQMIGQRGLMAGRDFASAFSSLRPNDLLWNYVESNYLKGEKPSAFDLLYWNA 434 DE ++ EQ IG GLM G DF +AF+SLR N+L+WNYV SNYLKGE P+ FD+LYWNA Sbjct: 335 DEGKIKEIEQEIGSGGLMKGLDFNAAFASLRSNELIWNYVASNYLKGENPAPFDMLYWNA 394 Query: 435 DSTNLPGPMFCYYLRHMYLENALKEPGRLTVGGEKIDLRKINAPAFIYASRDDHIVPWKS 494 DSTNLPGPM+C+Y+R+ YLEN LK+ G+ +G + IDLR+I+AP+FIY SRDDHIVPW S Sbjct: 395 DSTNLPGPMYCWYVRNTYLENNLKQFGKFMLGDKSIDLRQIDAPSFIYGSRDDHIVPWTS 454 Query: 495 AYASLGLINTAKRSNNRFVLGASGHIAGVINPASTNKRNYWVNDKAKAGSDADAWLAGAT 554 AY S+ ++N K NRFVLGA+GHIAGVINP ++R YW+ND + G DA +WLAGA Sbjct: 455 AYESVNILNRKKPQQNRFVLGAAGHIAGVINPPGKSRRQYWIND-VQDGLDAMSWLAGAQ 513 Query: 555 EHPGSWWGQWAAFLAKHGGRKVAAPKAAGSTRYKHIEPAPGRYVKVKA 602 E GSWW W FLA H G++V A G+ ++K IE APGRYVK KA Sbjct: 514 EVAGSWWPAWTEFLASHAGKQVKARSKLGNAKFKPIEAAPGRYVKAKA 561 >ref|ZP_08273177.1| Polyhydroxyalkanoic acid synthase [Oxalobacteraceae bacterium IMCC9480] gb|EGF33367.1| Polyhydroxyalkanoic acid synthase [Oxalobacteraceae bacterium IMCC9480] Length = 559 Score = 720 bits (1858), Expect = 0.0, Method: Compositional matrix adjust. Identities = 338/527 (64%), Positives = 413/527 (78%), Gaps = 3/527 (0%) Query: 76 ATIDPAELVRLQQDYTQQFGALWQSMLAAKTPAITDRRLSAPAWQEHPYFAFQAAAYQLN 135 A DPA + LQ Y Q+ G+LW S ++A AI D+R APAWQ +P +F A+AY LN Sbjct: 35 AEFDPAVMASLQAKYMQELGSLWTSTMSAPAAAIADKRFGAPAWQANPMGSFNASAYLLN 94 Query: 136 SRFLLALADAVQGSEKVRHKLRFAVQQMIDAMSPANFLATNPVAQQKILETRGESLTKGI 195 ++FL A+ DAV+ + KV+ K+RF VQQMIDAMSPANFL TNP AQQ +LET+GESL++G+ Sbjct: 95 AKFLNAMTDAVKATPKVKEKIRFNVQQMIDAMSPANFLVTNPEAQQLLLETKGESLSRGL 154 Query: 196 AQLLADLQKGHVSQTDETAFEVGRDVGASEGSVIFENELFQLIQYKPLTKTVHEVPLLIV 255 QLLAD++KG +SQTDETAFEVG++V +EG+V+FENELFQL+QYKPLTKTV E PLLI+ Sbjct: 155 TQLLADMRKGRISQTDETAFEVGKNVATTEGAVVFENELFQLLQYKPLTKTVFERPLLIM 214 Query: 256 PPCINKFYILDLQPHNSLVRYTVEQGHTVFLISWRNADAAVETATWDQYVDDAVVRSIHI 315 PPCINK+YILDLQP NSLVRY VEQGHTVFLISWRN DA++ TWD Y++ +I + Sbjct: 215 PPCINKYYILDLQPENSLVRYAVEQGHTVFLISWRNPDASLAHLTWDDYIELGAFEAIAV 274 Query: 316 VQEISKQPQINALGFCVGGTILSCALALLAARGEDPVASLTLLTTFLDFSDTGAIDVYID 375 Q+IS Q QINALGFCVGGTILS ALALL ARGE PV+SLTLLT FLDF+DTG IDV++D Sbjct: 275 TQQISGQEQINALGFCVGGTILSTALALLFARGEKPVSSLTLLTAFLDFTDTGIIDVFVD 334 Query: 376 EMQLALREQMIGQRGLMAGRDFASAFSSLRPNDLLWNYVESNYLKGEKPSAFDLLYWNAD 435 E + REQ IGQ GLM G++FA FSSLR NDL+W+YV+SNYLKGE P AFDLLYWN+D Sbjct: 335 EEAVVKREQAIGQGGLMEGKEFAQTFSSLRSNDLVWSYVKSNYLKGEAPPAFDLLYWNSD 394 Query: 436 STNLPGPMFCYYLRHMYLENALKEPGRLTVGGEKIDLRKINAPAFIYASRDDHIVPWKSA 495 STNLPGPMFC+YLR+ YLE+ LK PG+++V GE +D +I AP F+YASR+DHIVPW SA Sbjct: 395 STNLPGPMFCWYLRNTYLEDGLKHPGKVSVLGEPVDFGQIAAPTFLYASREDHIVPWTSA 454 Query: 496 YASLGLINTAKRSNNRFVLGASGHIAGVINPASTNKRNYWVNDKAKAGSDADAWLAGATE 555 YAS+ L+N N+FV+GASGHIAGVIN + NKR++W ND K A W+ +TE Sbjct: 455 YASMALLNPKHPKLNQFVVGASGHIAGVINAPAKNKRSFWSND--KVAKSAAEWMEKSTE 512 Query: 556 HPGSWWGQWAAFLAKHGGRKVAAPKAAGSTRYKHIEPAPGRYVKVKA 602 PGSWW WAAFL KH G++V P+A G+ + IEPAPGRYVK K+ Sbjct: 513 QPGSWWPSWAAFLQKHAGKQV-KPRAYGNADFPVIEPAPGRYVKAKS 558 >ref|YP_001100197.1| Poly-beta-hydroxybutyrate polymerase [Herminiimonas arsenicoxydans] emb|CAL62073.1| Poly-beta-hydroxybutyrate polymerase (Poly(3-hydroxybutyrate) polymerase) (PHB polymerase) (PHB synthase) (Poly(3-hydroxyalkanoate) polymerase) (PHA polymerase) (PHA synthase) (Polyhydroxyalkanoic acid synthase) [Herminiimonas arsenicoxydans] Length = 537 Score = 707 bits (1826), Expect = 0.0, Method: Compositional matrix adjust. Identities = 336/525 (64%), Positives = 412/525 (78%), Gaps = 2/525 (0%) Query: 78 IDPAELVRLQQDYTQQFGALWQSMLAAKTPAITDRRLSAPAWQEHPYFAFQAAAYQLNSR 137 IDPA LQ+DY Q+F LWQ ML A+ P + D+R SA AWQ AF A+ Y LN++ Sbjct: 14 IDPAVAAELQRDYAQKFLTLWQQMLTAQVPPLADKRFSAAAWQSSTLHAFNASVYLLNAQ 73 Query: 138 FLLALADAVQGSEKVRHKLRFAVQQMIDAMSPANFLATNPVAQQKILETRGESLTKGIAQ 197 FL A+ADA+Q + KV+ K+RF V+QM++AMSPANFL +NP AQQKI+ET G SLT G+ Sbjct: 74 FLAAMADAMQVTPKVKQKIRFGVEQMVNAMSPANFLFSNPEAQQKIVETNGASLTNGLKH 133 Query: 198 LLADLQKGHVSQTDETAFEVGRDVGASEGSVIFENELFQLIQYKPLTKTVHEVPLLIVPP 257 L D+QKG +SQ+DE+AFEVGR+V +EG+VIFEN+LFQL+QYK LT TV+E PLL+VPP Sbjct: 134 LFEDMQKGRISQSDESAFEVGRNVAITEGAVIFENDLFQLLQYKALTPTVYERPLLLVPP 193 Query: 258 CINKFYILDLQPHNSLVRYTVEQGHTVFLISWRNADAAVETATWDQYVDDAVVRSIHIVQ 317 CINK+YILDLQPHNS VRY VEQGHTVFLISWRNADA++ ATWD YV+ V+++I + Q Sbjct: 194 CINKYYILDLQPHNSFVRYAVEQGHTVFLISWRNADASIAHATWDDYVESGVLQAISVAQ 253 Query: 318 EISKQPQINALGFCVGGTILSCALALLAARGEDPVASLTLLTTFLDFSDTGAIDVYIDEM 377 IS Q +IN LGFCVGGT+L+ ALAL ARGE P ASLTLLTTFLDFSDTG +DVYIDE Sbjct: 254 AISVQEKINVLGFCVGGTMLANALALACARGEKPAASLTLLTTFLDFSDTGILDVYIDEA 313 Query: 378 QLALREQMIGQRGLMAGRDFASAFSSLRPNDLLWNYVESNYLKGEKPSAFDLLYWNADST 437 ++ E++IG GLM G DF +AF+SLR N+L+WNYV SNYLKGE P FD+LYWNADST Sbjct: 314 KIKETEELIGHGGLMKGLDFNAAFASLRSNELIWNYVTSNYLKGENPVPFDMLYWNADST 373 Query: 438 NLPGPMFCYYLRHMYLENALKEPGRLTVGGEKIDLRKINAPAFIYASRDDHIVPWKSAYA 497 NLPGPM+C+Y+R+ YLEN LK+ G+ + G+KID KI+AP+FIY SRDDHIVPW SAYA Sbjct: 374 NLPGPMYCWYVRNTYLENNLKQLGKFKLAGKKIDFGKIDAPSFIYGSRDDHIVPWTSAYA 433 Query: 498 SLGLINTAKRSNNRFVLGASGHIAGVINPASTNKRNYWVNDKAKAGSDADAWLAGATEHP 557 S ++N K NRFVLGA+GHIAGVINP +KR+YW+ND+ + +DA +WLAGATE Sbjct: 434 STAILNRKKPQQNRFVLGAAGHIAGVINPPGKSKRHYWINDQRE--TDALSWLAGATEVA 491 Query: 558 GSWWGQWAAFLAKHGGRKVAAPKAAGSTRYKHIEPAPGRYVKVKA 602 GSWW W+ FLA+H G+KV AP G+ +K IE APGRYVKVKA Sbjct: 492 GSWWPAWSDFLAQHAGKKVKAPHKMGNAEFKPIEAAPGRYVKVKA 536 >gb|AAB06755.1| PHB polymerase [Zoogloea ramigera] Length = 576 Score = 689 bits (1779), Expect = 0.0, Method: Compositional matrix adjust. Identities = 352/608 (57%), Positives = 435/608 (71%), Gaps = 38/608 (6%) Query: 1 MNKQNPQQPSPDVSAWLAQMSDPKFWTALQSQFQSQFAQFKPPAQAFPGFAAMGAPPAGS 60 MN +PQ + +AW++Q+ DP SQ+QS F++ AP + Sbjct: 1 MNLPDPQAIA---NAWMSQVGDP-------SQWQSWFSK---------------APT--T 33 Query: 61 QVDPTAFLKQLADNGATIDPAELVRLQQDYTQQFGALWQSMLAAKTPAITDRRLSAPAWQ 120 + +P A + L D G + P + +L+ DY + F ALWQ LA K PA+ R S+ AWQ Sbjct: 34 EANPMATM--LQDIGVALKPEAMEQLKNDYLRDFTALWQDFLAGKAPAVQRPRFSSAAWQ 91 Query: 121 EHPYFAFQAAAYQLNSRFLLALADAVQGSEKVRHKLRFAVQQMIDAMSPANFLATNPVAQ 180 +P AF AA+Y LN++FL A+ +AV + + + K+RFAVQQ+IDAMSPANFLATNP AQ Sbjct: 92 GNPMSAFNAASYLLNAKFLSAMVEAVDTAPQQKQKIRFAVQQVIDAMSPANFLATNPEAQ 151 Query: 181 QKILETRGESLTKGIAQLLADLQ------KGHVSQTDETAFEVGRDVGASEGSVIFENEL 234 QK++ET+GESLT+G+ +L D+ GH+S +DE+AFEVGR++ + G+VI+EN L Sbjct: 152 QKLIETKGESLTRGLVNMLGDINMLGDINNGHISLSDESAFEVGRNLAITPGTVIYENPL 211 Query: 235 FQLIQYKPLTKTVHEVPLLIVPPCINKFYILDLQPHNSLVRYTVEQGHTVFLISWRNADA 294 FQLIQY P T TV + PLL+VPPCINKFYILDLQP NSLVRY VEQG+TVFLISW N D Sbjct: 212 FQLIQYTPTTPTVSQRPLLMVPPCINKFYILDLQPENSLVRYAVEQGNTVFLISWSNPDK 271 Query: 295 AVETATWDQYVDDAVVRSIHIVQEISKQPQINALGFCVGGTILSCALALLAARGEDPVAS 354 ++ TWD YV+ V+ +I IVQ++S Q ++N GFCVGGTI++ ALA+LAARG+ P AS Sbjct: 272 SLAGTTWDDYVEQGVIEAIRIVQDVSGQDKLNMFGFCVGGTIVATALAVLAARGQHPAAS 331 Query: 355 LTLLTTFLDFSDTGAIDVYIDEMQLALREQMIGQRGLMAGRDFASAFSSLRPNDLLWNYV 414 LTLLTTFLDFSDTG E Q+ALREQ + GLM GRD AS FSSLRPNDL+WNYV Sbjct: 332 LTLLTTFLDFSDTGC-STSCRETQVALREQQLRDGGLMPGRDLASTFSSLRPNDLVWNYV 390 Query: 415 ESNYLKGEKPSAFDLLYWNADSTNLPGPMFCYYLRHMYLENALKEPGRLTVGGEKIDLRK 474 +SNYLKG +P+AFDLL+WN+DSTNLPGPMFC+YLR+ YLEN+LK PG+LTV GEKIDL Sbjct: 391 QSNYLKGNEPAAFDLLFWNSDSTNLPGPMFCWYLRNTYLENSLKVPGKLTVAGEKIDLGL 450 Query: 475 INAPAFIYASRDDHIVPWKSAYASLGLINTAKRSNNRFVLGASGHIAGVINPASTNKRNY 534 I+APAFIY SR+DHIVPW SAY SL ++N K NRFVLGASGHIAGVIN + NKR Y Sbjct: 451 IDAPAFIYGSREDHIVPWMSAYGSLDILNQGKPGANRFVLGASGHIAGVINSVAKNKRTY 510 Query: 535 WVNDKAKAGSDADAWLAGATEHPGSWWGQWAAFLAKHGGRKVAAPKAAGSTRYKHIEPAP 594 W+ND A DA AW GA E PGSWW QWA FL +HGG+KV G+ RY IE AP Sbjct: 511 WINDGGAA--DAQAWFDGAQEVPGSWWPQWAGFLTQHGGKKVKPKAKPGNARYTAIEAAP 568 Query: 595 GRYVKVKA 602 GRYVK K Sbjct: 569 GRYVKAKG 576 >gb|ADY39738.1| PHA synthase [uncultured bacterium] Length = 564 Score = 672 bits (1733), Expect = 0.0, Method: Compositional matrix adjust. Identities = 321/526 (61%), Positives = 400/526 (76%), Gaps = 8/526 (1%) Query: 78 IDPAELVRLQQDYTQQFGALWQSMLAAKTPAITDRRLSAPAWQEHPYFAFQAAAYQLNSR 137 DPA+L+ LQQ Y ++ LW + L + PA D+R ++ AW +P F AA Y LN+R Sbjct: 46 FDPAKLLELQQAYLREAAQLWNAGLE-QQPAARDKRFASDAWARNPVAGFAAAVYLLNAR 104 Query: 138 FLLALADAVQGSEKVRHKLRFAVQQMIDAMSPANFLATNPVAQQKILETRGESLTKGIAQ 197 LL +A+A K + +LRFAV+Q + A +P+NF+A N AQQK +ET+GES+ +G+ Sbjct: 105 TLLGMAEAADTDPKTKARLRFAVEQWMAAAAPSNFMALNAEAQQKAVETQGESIARGMQN 164 Query: 198 LLADLQKGHVSQTDETAFEVGRDVGASEGSVIFENELFQLIQYKPLTKTVHEVPLLIVPP 257 LLADLQ+GHVS TDE+AFEVGR+V +EG+V+FENELFQLI+YKPLTK V+E P L+VPP Sbjct: 165 LLADLQQGHVSMTDESAFEVGRNVATTEGAVVFENELFQLIEYKPLTKQVYERPFLVVPP 224 Query: 258 CINKFYILDLQPHNSLVRYTVEQGHTVFLISWRNADAAVETATWDQYVDDAVVRSIHIVQ 317 CINKFYILDLQP NSL+RY VEQGH F++SWRN DA+++ TWD Y++DA +++I VQ Sbjct: 225 CINKFYILDLQPENSLIRYLVEQGHRTFVVSWRNVDASLQDKTWDDYIEDAALKAIACVQ 284 Query: 318 EISKQPQINALGFCVGGTILSCALALLAARGEDPVASLTLLTTFLDFSDTGAIDVYIDEM 377 EI+ QINALGFCVGGTIL ALA+ AARG+ PVAS TLLTTFLDFS+TG +D++IDE Sbjct: 285 EIAGARQINALGFCVGGTILGTALAVAAARGQKPVASATLLTTFLDFSETGVLDIFIDEA 344 Query: 378 QLALREQMIGQRGLMAGRDFASAFSSLRPNDLLWNYVESNYLKGEKPSAFDLLYWNADST 437 + RE +G+ GLM G++ AS FS LRPNDL+WNYV NYLKGE P FDLLYWN+DST Sbjct: 345 FVKFREMQLGKSGLMKGQELASTFSFLRPNDLVWNYVVGNYLKGETPPPFDLLYWNSDST 404 Query: 438 NLPGPMFCYYLRHMYLENALKEPGRLTVGGEKIDLRKINAPAFIYASRDDHIVPWKSAYA 497 NLPGPM+ +YLR+ YLEN L +PG+ V GEK+DLRK++ P F+Y SR+DHIVP AYA Sbjct: 405 NLPGPMYAWYLRNTYLENNLVKPGKAVVCGEKVDLRKVDLPVFVYGSREDHIVPIAGAYA 464 Query: 498 SLGLINTAKRSNNRFVLGASGHIAGVINPASTNKRNYWVNDKAKAGSDADAWLAGATEHP 557 S+ + K RFV+GASGHIAGVINP + NKR+YW NDK A DAWLAGA EHP Sbjct: 465 SVKHLPGKK----RFVMGASGHIAGVINPPAKNKRSYWTNDKLPA--TFDAWLAGAKEHP 518 Query: 558 GSWWGQWAAFLAKHGGRKVAAPKAAG-STRYKHIEPAPGRYVKVKA 602 GSWW +W+A+L H G+KVAAPKA G T+YK IEPAPGRYVK KA Sbjct: 519 GSWWPEWSAWLKPHAGKKVAAPKAYGKGTKYKAIEPAPGRYVKAKA 564 >ref|YP_003745545.1| polyhydroxyalkanoic acid synthase [Ralstonia solanacearum CFBP2957] emb|CBJ42930.1| Polyhydroxyalkanoic acid synthase [Ralstonia solanacearum CFBP2957] Length = 598 Score = 662 bits (1709), Expect = 0.0, Method: Compositional matrix adjust. Identities = 338/594 (56%), Positives = 420/594 (70%), Gaps = 29/594 (4%) Query: 20 MSDPKFWTALQSQFQSQ---FAQFKPPAQAFPGFAAMGAPPAGSQVDPTAFLKQLADNGA 76 ++DP W Q+QS FAQ P GF + PAG P A Sbjct: 23 LADPAQWAEQFRQWQSMAGAFAQSGAPGST--GFGPVNGMPAGEGAIPFAL--------- 71 Query: 77 TIDPAELVRLQQDYTQQFGALWQSMLA---AKTPAITDRRLSAPAWQEHPYFAFQAAAYQ 133 I P L +QQ Y + + +W+ M A A+ A +DRR + AW++ P + + AA Y Sbjct: 72 -IPPERLAEIQQRYLEAWLQIWRHMSAGDSAEMVAPSDRRFANDAWRKSPLYGYAAAFYV 130 Query: 134 LNSRFLLALADAVQGSEKVRHKLRFAVQQMIDAMSPANFLATNPVAQQKILETRGESLTK 193 LN+R L+ +A+AVQ K R ++RFAV Q AMSP+NFLATNP AQ++++E+RGESL Sbjct: 131 LNARTLMEMAEAVQADAKTRERVRFAVSQWTAAMSPSNFLATNPEAQRQLIESRGESLRT 190 Query: 194 GIAQLLADLQKGHVSQTDETAFEVGRDVGASEGSVIFENELFQLIQYKPLTKTVHEVPLL 253 GI +L D+++G +SQTDETAFE+GR+V SEGSV+FEN+ FQLIQYKPLT VH PLL Sbjct: 191 GILNMLQDMERGKISQTDETAFEIGRNVANSEGSVVFENDYFQLIQYKPLTAKVHARPLL 250 Query: 254 IVPPCINKFYILDLQPHNSLVRYTVEQGHTVFLISWRNADAAVETATWDQYVDDAVVRSI 313 +VPPCINK+YILDLQP NSLVRY+VEQGHTVFL+SWRN DA++ WD Y++ + +I Sbjct: 251 LVPPCINKYYILDLQPANSLVRYSVEQGHTVFLVSWRNPDASMAARNWDDYIEGGAIEAI 310 Query: 314 HIVQEISKQPQINALGFCVGGTILSCALALLAARGEDPVASLTLLTTFLDFSDTGAIDVY 373 + +EIS Q QIN LGFCVGGTILS ALA+LAARG+ PVASLTLLTT LDFSDTG +DV+ Sbjct: 311 RVAREISAQDQINVLGFCVGGTILSTALAVLAARGQHPVASLTLLTTLLDFSDTGILDVF 370 Query: 374 IDEMQLALREQMIGQR-----GLMAGRDFASAFSSLRPNDLLWNYVESNYLKGEKPSAFD 428 +D+ Q+ +REQ IG GL+ G + A+ FS LRPNDL+WNYV NYLKG+ P+ FD Sbjct: 371 VDQAQVEMREQTIGSAAPTGPGLLRGVELANTFSFLRPNDLVWNYVVENYLKGKTPAPFD 430 Query: 429 LLYWNADSTNLPGPMFCYYLRHMYLENALKEPGRLTVGGEKIDLRKINAPAFIYASRDDH 488 LLYWN DSTNLPGP +C+YLRHMYL+N L PG+LTV GE IDL +I+ P +IY SR+DH Sbjct: 431 LLYWNGDSTNLPGPWYCWYLRHMYLQNDLMVPGKLTVCGEPIDLGRIDVPVYIYGSREDH 490 Query: 489 IVPWKSAYASLGLINTAKRSNNRFVLGASGHIAGVINPASTNKRNYWVNDKAKAGSDADA 548 IVPWKSAYAS L+ + RFVLGASGHIAGVINP + NKR++W+N AK ADA Sbjct: 491 IVPWKSAYASTQLL----KGKLRFVLGASGHIAGVINPPAANKRSHWIN--AKLAESADA 544 Query: 549 WLAGATEHPGSWWGQWAAFLAKHGGRKVAAPKAAGSTRYKHIEPAPGRYVKVKA 602 WL GA EHPGSWW W+A+LA H G + AAPK G+ + IEPAPGRYVK KA Sbjct: 545 WLEGAQEHPGSWWPDWSAWLATHAGAQKAAPKRYGNADHPAIEPAPGRYVKQKA 598 >ref|ZP_00942942.1| Poly(3-hydroxyalkanoate) polymerase [Ralstonia solanacearum UW551] ref|YP_002259412.1| poly-beta-hydroxybutyrate polymerase protein [Ralstonia solanacearum IPO1609] gb|EAP74696.1| Poly(3-hydroxyalkanoate) polymerase [Ralstonia solanacearum UW551] emb|CAQ61344.1| poly-beta-hydroxybutyrate polymerase protein [Ralstonia solanacearum IPO1609] Length = 598 Score = 660 bits (1704), Expect = 0.0, Method: Compositional matrix adjust. Identities = 337/594 (56%), Positives = 420/594 (70%), Gaps = 29/594 (4%) Query: 20 MSDPKFWTALQSQFQSQ---FAQFKPPAQAFPGFAAMGAPPAGSQVDPTAFLKQLADNGA 76 ++DP W Q+QS FAQ P A GF PAG P A Sbjct: 23 LADPAQWAEQFRQWQSMAGAFAQSGAPGSA--GFGPANGMPAGEGAIPFAL--------- 71 Query: 77 TIDPAELVRLQQDYTQQFGALWQSMLA---AKTPAITDRRLSAPAWQEHPYFAFQAAAYQ 133 I P L +QQ Y + + +W+ M A A+T A +DRR + AW++ P + + AA Y Sbjct: 72 -IPPERLAEIQQRYLEAWLQIWRHMSAGDSAETVAPSDRRFANDAWRKSPLYGYAAAFYV 130 Query: 134 LNSRFLLALADAVQGSEKVRHKLRFAVQQMIDAMSPANFLATNPVAQQKILETRGESLTK 193 LN+R L+ +A+AVQ K R ++RFAV Q AMSP+NFLATNP AQ++++E+RGESL Sbjct: 131 LNARTLMEMAEAVQADAKTRERVRFAVSQWTAAMSPSNFLATNPEAQRQLIESRGESLRT 190 Query: 194 GIAQLLADLQKGHVSQTDETAFEVGRDVGASEGSVIFENELFQLIQYKPLTKTVHEVPLL 253 GI +L D+++G +SQTDETAFE+GR+V SEGSV+FEN+ FQLIQYKPLT VH PLL Sbjct: 191 GILNMLQDMERGKISQTDETAFEIGRNVANSEGSVVFENDYFQLIQYKPLTAKVHARPLL 250 Query: 254 IVPPCINKFYILDLQPHNSLVRYTVEQGHTVFLISWRNADAAVETATWDQYVDDAVVRSI 313 +VPPCINK+YILDLQP NSLVRY+VEQGHTVFL+SWRN DA++ + WD Y++ + +I Sbjct: 251 LVPPCINKYYILDLQPANSLVRYSVEQGHTVFLVSWRNPDASMAASNWDDYIEGGAIEAI 310 Query: 314 HIVQEISKQPQINALGFCVGGTILSCALALLAARGEDPVASLTLLTTFLDFSDTGAIDVY 373 + +EIS Q QIN LGFCVGGTILS ALA+LAARG+ P ASLTLLTT LDFSDTG +DV+ Sbjct: 311 RVAREISAQDQINVLGFCVGGTILSTALAVLAARGQHPAASLTLLTTLLDFSDTGILDVF 370 Query: 374 IDEMQLALREQMIGQR-----GLMAGRDFASAFSSLRPNDLLWNYVESNYLKGEKPSAFD 428 +D+ Q+ +REQ IG GL+ G + A+ FS LRPNDL+WNYV NYLKG+ P+ FD Sbjct: 371 VDQAQVEMREQTIGSAAPAGPGLLRGVELANTFSFLRPNDLVWNYVVENYLKGKTPAPFD 430 Query: 429 LLYWNADSTNLPGPMFCYYLRHMYLENALKEPGRLTVGGEKIDLRKINAPAFIYASRDDH 488 LLYWN DSTNLPGP +C+YLRH YL+N L PG+LTV GE IDL +I+ P ++Y SR+DH Sbjct: 431 LLYWNGDSTNLPGPWYCWYLRHTYLQNDLMVPGKLTVCGEPIDLGRIDVPVYLYGSREDH 490 Query: 489 IVPWKSAYASLGLINTAKRSNNRFVLGASGHIAGVINPASTNKRNYWVNDKAKAGSDADA 548 IVPWKSAYAS L+ + RFVLGASGHIAGVINP + NKR++W+N AK ADA Sbjct: 491 IVPWKSAYASTQLL----KGKLRFVLGASGHIAGVINPPAANKRSHWIN--AKLAESADA 544 Query: 549 WLAGATEHPGSWWGQWAAFLAKHGGRKVAAPKAAGSTRYKHIEPAPGRYVKVKA 602 WL GA EHPGSWW W+A+LA H G + AAPK G+ + IEPAPGRYVK KA Sbjct: 545 WLEGAQEHPGSWWPDWSAWLATHAGAQKAAPKRYGNADHPAIEPAPGRYVKQKA 598 >ref|YP_001791119.1| poly(R)-hydroxyalkanoic acid synthase, class I [Leptothrix cholodnii SP-6] gb|ACB34354.1| poly(R)-hydroxyalkanoic acid synthase, class I [Leptothrix cholodnii SP-6] Length = 586 Score = 660 bits (1703), Expect = 0.0, Method: Compositional matrix adjust. Identities = 313/530 (59%), Positives = 396/530 (74%), Gaps = 12/530 (2%) Query: 78 IDPAELVRLQQDYTQQFGALWQSML-AAKTPAITDRRLSAPAWQEHPYFAFQAAAYQLNS 136 I PAEL R+Q +Y QQ LW S L A +PA DRR ++ W P F AA Y LN+ Sbjct: 62 IPPAELSRIQAEYVQQAAQLWNSALTGAASPAPGDRRFASAEWSSSPMSGFTAALYLLNA 121 Query: 137 RFLLALADAVQGSEKVRHKLRFAVQQMIDAMSPANFLATNPVAQQKILETRGESLTKGIA 196 R L+ +A++V G K R ++RFAVQQ IDA +P+N+LA NP AQ+K LET+GES+ G+ Sbjct: 122 RTLMQMAESVDGDAKTRARVRFAVQQWIDAAAPSNYLALNPDAQKKALETKGESIALGMQ 181 Query: 197 QLLADLQKGHVSQTDETAFEVGRDVGASEGSVIFENELFQLIQYKPLTKTVHEVPLLIVP 256 L+AD+++GHVSQTDE+ FEVGR+V +EG+V+FENELFQL++YKPLT+ VHE P+L VP Sbjct: 182 HLIADMRQGHVSQTDESLFEVGRNVATTEGAVVFENELFQLLEYKPLTEQVHERPMLFVP 241 Query: 257 PCINKFYILDLQPHNSLVRYTVEQGHTVFLISWRNADAAVETATWDQYVDDAVVRSIHIV 316 PCINK+YILDLQP NS++RYTV QGH VF++SWRN D ++ TWD Y +DAV+++I +V Sbjct: 242 PCINKYYILDLQPDNSVIRYTVAQGHRVFVLSWRNPDESLAAKTWDDYTEDAVIKAIRVV 301 Query: 317 QEISKQPQINALGFCVGGTILSCALALLAARGEDPVASLTLLTTFLDFSDTGAIDVYIDE 376 QEI I+ LGFCVGGT+L+CALA+LAARGE P AS+TLLT+FLDFS TG +D++IDE Sbjct: 302 QEIGGTDTIDMLGFCVGGTLLTCALAVLAARGEQPAASVTLLTSFLDFSATGILDLFIDE 361 Query: 377 MQLALREQMIGQR-----GLMAGRDFASAFSSLRPNDLLWNYVESNYLKGEKPSAFDLLY 431 + LRE +G GL+ G++ A+ FS LRPNDL+WNYV NYLKGE P FDLLY Sbjct: 362 ASVRLREITLGADAPKGPGLLKGKELAATFSFLRPNDLVWNYVVGNYLKGETPPPFDLLY 421 Query: 432 WNADSTNLPGPMFCYYLRHMYLENALKEPGRLTVGGEKIDLRKINAPAFIYASRDDHIVP 491 WN+DSTNLPGPM+C+YLR+ YLE+ LK PG LTV GEK+DL KI AP ++YASR+DHIVP Sbjct: 422 WNSDSTNLPGPMYCWYLRNTYLEDKLKVPGALTVCGEKVDLGKIKAPFYLYASREDHIVP 481 Query: 492 WKSAYASLGLINTAKRSNNRFVLGASGHIAGVINPASTNKRNYWVNDKAKAGSDADAWLA 551 W S+Y + ++N RFV+GASGHIAGVINP + KR++W+NDK A AWL Sbjct: 482 WDSSYLNTRILN----GKLRFVMGASGHIAGVINPPTKKKRSHWINDKLP--ETAQAWLD 535 Query: 552 GATEHPGSWWGQWAAFLAKHGGRKVAAPKAAGSTRYKHIEPAPGRYVKVK 601 GATEH GSWW W+ +L H G+ AAPK G+ +YK IEPAPGRYVK K Sbjct: 536 GATEHAGSWWPDWSEWLKGHAGKLKAAPKTYGNRKYKPIEPAPGRYVKQK 585