BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0035.0182.p (256 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776393.1| polybetahydroxybutyrate accumulation regulat... 379 e-103 ref|YP_004752432.1| hypothetical protein CFU_1777 [Collimonas fu... 333 2e-89 ref|ZP_08273179.1| PhbF [Oxalobacteraceae bacterium IMCC9480] >g... 323 2e-86 ref|YP_001100196.1| putative polyhydroxyalkanoate synthesis repr... 318 4e-85 ref|YP_583511.1| Polyhydroxyalkanoate synthesis transcriptional ... 318 5e-85 ref|YP_001353087.1| hypothetical protein mma_1397 [Janthinobacte... 306 2e-81 ref|YP_369327.1| polyhydroxyalkanoate synthesis repressor PhaR [... 304 8e-81 ref|YP_002230987.1| putative polyhydroxyalkanoate (PHA) synthesi... 304 1e-80 ref|YP_001808400.1| polyhydroxyalkonate synthesis repressor, Pha... 304 1e-80 ref|YP_626127.1| polyhydroxyalkonate synthesis repressor, PhaR [... 303 2e-80 >ref|YP_003776393.1| polybetahydroxybutyrate accumulation regulatory protein PhbF [Herbaspirillum seropedicae SmR1] emb|CAM32697.1| Polybetahydroxybutyrate accum [Herbaspirillum seropedicae] emb|CAM32702.1| Polybetahydroxybutyrate accumulation regulatory (PhbF) protein [Herbaspirillum seropedicae] gb|ADJ64485.1| polybetahydroxybutyrate accumulation regulatory (PhbF) protein [Herbaspirillum seropedicae SmR1] Length = 188 Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust. Identities = 182/184 (98%), Positives = 182/184 (98%) Query: 1 MTTAKNSADRLIKKYPNRRLYDTQTSSYITLTDVKQLVLDNEEFTVVDAKSGDDLTRSIL 60 MTTAKNSADRLIKKYPNRRLYDTQTSSYITLTDVKQLVLDNEEFTVVDAKSGDDLTRSIL Sbjct: 1 MTTAKNSADRLIKKYPNRRLYDTQTSSYITLTDVKQLVLDNEEFTVVDAKSGDDLTRSIL 60 Query: 61 LQIILEEESHGVPMFSSGALSQIIRYYGHAMQGMMGNYLEKNIQTFIDIQNKLAENSKGF 120 LQIILEEESHGVPMFSSGALSQIIRYYGHAMQGMMGNYLEKNIQTFIDIQNKLAENSKGF Sbjct: 61 LQIILEEESHGVPMFSSGALSQIIRYYGHAMQGMMGNYLEKNIQTFIDIQNKLAENSKGF 120 Query: 121 YEGKPFSPEMWTQFMNVQGPMMQGMMSNYIEQSKNLFIQMQEQMQSQTKNMFGTFPFGNP 180 YEGKPFSPEMWTQFMNVQGPMMQGMMSNYIEQSKNLFIQMQEQMQSQTKNMFGTFPFGNP Sbjct: 121 YEGKPFSPEMWTQFMNVQGPMMQGMMSNYIEQSKNLFIQMQEQMQSQTKNMFGTFPFGNP 180 Query: 181 GGXP 184 G P Sbjct: 181 GAGP 184 >ref|YP_004752432.1| hypothetical protein CFU_1777 [Collimonas fungivorans Ter331] gb|AEK61609.1| hypothetical protein CFU_1777 [Collimonas fungivorans Ter331] Length = 187 Score = 333 bits (853), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 160/180 (88%), Positives = 167/180 (92%) Query: 1 MTTAKNSADRLIKKYPNRRLYDTQTSSYITLTDVKQLVLDNEEFTVVDAKSGDDLTRSIL 60 MTT K ++RLIKKYPNRRLYDTQTSSYITLTDVKQLVLDNEEF V+DAK+ DDLTRSIL Sbjct: 1 MTTPKKMSERLIKKYPNRRLYDTQTSSYITLTDVKQLVLDNEEFVVLDAKTEDDLTRSIL 60 Query: 61 LQIILEEESHGVPMFSSGALSQIIRYYGHAMQGMMGNYLEKNIQTFIDIQNKLAENSKGF 120 LQIILEEES+G PMFSS ALSQIIRYYGHAMQGMMG+YLEKNIQ FIDIQNKL ENSKGF Sbjct: 61 LQIILEEESNGTPMFSSAALSQIIRYYGHAMQGMMGSYLEKNIQAFIDIQNKLTENSKGF 120 Query: 121 YEGKPFSPEMWTQFMNVQGPMMQGMMSNYIEQSKNLFIQMQEQMQSQTKNMFGTFPFGNP 180 YEGKPFSPEMW QFMNVQGPMMQGMMSNYIEQSK LFIQMQEQMQ+QTKNMFGTFPF P Sbjct: 121 YEGKPFSPEMWAQFMNVQGPMMQGMMSNYIEQSKGLFIQMQEQMQNQTKNMFGTFPFAPP 180 >ref|ZP_08273179.1| PhbF [Oxalobacteraceae bacterium IMCC9480] gb|EGF33369.1| PhbF [Oxalobacteraceae bacterium IMCC9480] Length = 186 Score = 323 bits (827), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 155/180 (86%), Positives = 165/180 (91%), Gaps = 1/180 (0%) Query: 1 MTTAKNSADRLIKKYPNRRLYDTQTSSYITLTDVKQLVLDNEEFTVVDAKSGDDLTRSIL 60 M + KN A+RLIKKYPNRRLYDTQTSSYITL DVKQLVLDNE F V+DAK+ DDLTR+IL Sbjct: 1 MNSVKNVAERLIKKYPNRRLYDTQTSSYITLVDVKQLVLDNEVFMVIDAKTNDDLTRAIL 60 Query: 61 LQIILEEESHGVPMFSSGALSQIIRYYGHAMQGMMGNYLEKNIQTFIDIQNKLAENSKGF 120 LQIILEEES+G PMFSS ALSQIIRYYGHAMQGMMGNYLEKNIQ FIDIQNKL ENSKG Sbjct: 61 LQIILEEESNGSPMFSSEALSQIIRYYGHAMQGMMGNYLEKNIQAFIDIQNKLTENSKGM 120 Query: 121 YEGKPFSPEMWTQFMNVQGPMMQGMMSNYIEQSKNLFIQMQEQMQSQTKNMFGTFPFGNP 180 YEGKPFSPEMWTQFMNVQGPMMQG+ SNYIEQSK+LF+QMQEQMQSQTK+MFG FPF NP Sbjct: 121 YEGKPFSPEMWTQFMNVQGPMMQGITSNYIEQSKSLFVQMQEQMQSQTKSMFGAFPF-NP 179 >ref|YP_001100196.1| putative polyhydroxyalkanoate synthesis repressor PhaR [Herminiimonas arsenicoxydans] emb|CAL62072.1| Polyhydroxyalkanoate synthesis repressor PhaR [Herminiimonas arsenicoxydans] Length = 190 Score = 318 bits (816), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 149/173 (86%), Positives = 162/173 (93%) Query: 1 MTTAKNSADRLIKKYPNRRLYDTQTSSYITLTDVKQLVLDNEEFTVVDAKSGDDLTRSIL 60 MT+ K A+RLIKKYPNRRLYDTQTSSYITL DVKQLVLD+E+F+VVDAK+ +DLTRSIL Sbjct: 1 MTSTKKMAERLIKKYPNRRLYDTQTSSYITLADVKQLVLDSEQFSVVDAKTDEDLTRSIL 60 Query: 61 LQIILEEESHGVPMFSSGALSQIIRYYGHAMQGMMGNYLEKNIQTFIDIQNKLAENSKGF 120 LQIILEEE++G PMFSS ALSQIIRYYGHAMQGMMG+YLEKNIQ FIDIQNKL ENSKG Sbjct: 61 LQIILEEEANGSPMFSSAALSQIIRYYGHAMQGMMGSYLEKNIQAFIDIQNKLTENSKGL 120 Query: 121 YEGKPFSPEMWTQFMNVQGPMMQGMMSNYIEQSKNLFIQMQEQMQSQTKNMFG 173 YEGKPFSPEMW QFMNVQGPMMQGMMSNYIEQSKNLF+QMQEQMQ+Q+KNMFG Sbjct: 121 YEGKPFSPEMWAQFMNVQGPMMQGMMSNYIEQSKNLFVQMQEQMQTQSKNMFG 173 >ref|YP_583511.1| Polyhydroxyalkanoate synthesis transcriptional regulator [Cupriavidus metallidurans CH34] gb|ABF08242.1| transcriptional regulator of Polyhydroxyalkanoate synthesis (repressor) [Cupriavidus metallidurans CH34] Length = 183 Score = 318 bits (815), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 148/180 (82%), Positives = 165/180 (91%) Query: 1 MTTAKNSADRLIKKYPNRRLYDTQTSSYITLTDVKQLVLDNEEFTVVDAKSGDDLTRSIL 60 M T+K A+RLIKKYPNRRLYDTQTS+YITL DVKQLV+D+EEF VVDAKSG++LTRSIL Sbjct: 1 MATSKKGAERLIKKYPNRRLYDTQTSTYITLADVKQLVMDSEEFKVVDAKSGEELTRSIL 60 Query: 61 LQIILEEESHGVPMFSSGALSQIIRYYGHAMQGMMGNYLEKNIQTFIDIQNKLAENSKGF 120 LQIILEEE+ GVPMFSS LSQIIR+YGHAMQGMMG YLEKNIQ FIDIQ+KLAENSKG Sbjct: 61 LQIILEEETGGVPMFSSAMLSQIIRFYGHAMQGMMGTYLEKNIQAFIDIQSKLAENSKGL 120 Query: 121 YEGKPFSPEMWTQFMNVQGPMMQGMMSNYIEQSKNLFIQMQEQMQSQTKNMFGTFPFGNP 180 Y G+PFSP+MW+QFMN+QGPMMQGMMSNYIEQSKNLF+QMQEQMQ+Q K+MFGTFPF P Sbjct: 121 YSGEPFSPDMWSQFMNLQGPMMQGMMSNYIEQSKNLFVQMQEQMQNQAKSMFGTFPFNQP 180 >ref|YP_001353087.1| hypothetical protein mma_1397 [Janthinobacterium sp. Marseille] gb|ABR89915.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 190 Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 143/171 (83%), Positives = 160/171 (93%) Query: 1 MTTAKNSADRLIKKYPNRRLYDTQTSSYITLTDVKQLVLDNEEFTVVDAKSGDDLTRSIL 60 MT+ K ++RLIKKYPNRRLYDTQTSSYITL DVKQLVLD+E+F+V+DAK+ +DLTRSIL Sbjct: 1 MTSTKKISERLIKKYPNRRLYDTQTSSYITLADVKQLVLDSEQFSVLDAKTDEDLTRSIL 60 Query: 61 LQIILEEESHGVPMFSSGALSQIIRYYGHAMQGMMGNYLEKNIQTFIDIQNKLAENSKGF 120 LQIILEEE++G PMFSS ALSQIIRYYGHAMQGMMG+YLEKNIQ FIDIQNKL ENSK Sbjct: 61 LQIILEEEANGSPMFSSAALSQIIRYYGHAMQGMMGSYLEKNIQAFIDIQNKLTENSKDL 120 Query: 121 YEGKPFSPEMWTQFMNVQGPMMQGMMSNYIEQSKNLFIQMQEQMQSQTKNM 171 YEGKPFSPEMWTQFMNVQGP+MQGMMSNYIEQSK+LF+QMQEQMQ+Q+KNM Sbjct: 121 YEGKPFSPEMWTQFMNVQGPIMQGMMSNYIEQSKSLFVQMQEQMQTQSKNM 171 >ref|YP_369327.1| polyhydroxyalkanoate synthesis repressor PhaR [Burkholderia sp. 383] gb|ABB08683.1| Polyhydroxyalkanoate synthesis repressor PhaR [Burkholderia sp. 383] Length = 188 Score = 304 bits (779), Expect = 8e-81, Method: Compositional matrix adjust. Identities = 141/182 (77%), Positives = 160/182 (87%) Query: 1 MTTAKNSADRLIKKYPNRRLYDTQTSSYITLTDVKQLVLDNEEFTVVDAKSGDDLTRSIL 60 MTT K +A+RLIKKYPNRRLYDT+TS+YITLTDVKQLVL+ E+F VVDAKS +DLTRSIL Sbjct: 1 MTTTKKTAERLIKKYPNRRLYDTETSTYITLTDVKQLVLEQEDFKVVDAKSSEDLTRSIL 60 Query: 61 LQIILEEESHGVPMFSSGALSQIIRYYGHAMQGMMGNYLEKNIQTFIDIQNKLAENSKGF 120 LQIILEEES GVPMFSS LSQIIR+YGHAMQGMMG YLEKNIQ FIDIQNKLA+ SK Sbjct: 61 LQIILEEESGGVPMFSSSMLSQIIRFYGHAMQGMMGTYLEKNIQAFIDIQNKLADQSKNL 120 Query: 121 YEGKPFSPEMWTQFMNVQGPMMQGMMSNYIEQSKNLFIQMQEQMQSQTKNMFGTFPFGNP 180 YEG +PE+W+QFMN+Q PMMQGMM++YIEQSKN+F+QMQEQMQ+Q K+MF TFPF P Sbjct: 121 YEGNAMNPEVWSQFMNMQAPMMQGMMTSYIEQSKNMFVQMQEQMQNQAKSMFSTFPFKQP 180 Query: 181 GG 182 G Sbjct: 181 GA 182 >ref|YP_002230987.1| putative polyhydroxyalkanoate (PHA) synthesis regulatory protein [Burkholderia cenocepacia J2315] emb|CAR52160.1| putative polyhydroxyalkanoate (PHA) synthesis regulatory protein [Burkholderia cenocepacia J2315] Length = 188 Score = 304 bits (778), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 141/182 (77%), Positives = 160/182 (87%) Query: 1 MTTAKNSADRLIKKYPNRRLYDTQTSSYITLTDVKQLVLDNEEFTVVDAKSGDDLTRSIL 60 MTT K +A+RLIKKYPNRRLYDT+TS+YITLTDVKQLVL+ E+F VVDAKS +DLTRSIL Sbjct: 1 MTTTKKTAERLIKKYPNRRLYDTETSTYITLTDVKQLVLEQEDFKVVDAKSNEDLTRSIL 60 Query: 61 LQIILEEESHGVPMFSSGALSQIIRYYGHAMQGMMGNYLEKNIQTFIDIQNKLAENSKGF 120 LQIILEEES GVPMFSS LSQIIR+YGHAMQGMMG YLEKNIQ FIDIQNKLA+ SK Sbjct: 61 LQIILEEESGGVPMFSSSMLSQIIRFYGHAMQGMMGTYLEKNIQAFIDIQNKLADQSKNL 120 Query: 121 YEGKPFSPEMWTQFMNVQGPMMQGMMSNYIEQSKNLFIQMQEQMQSQTKNMFGTFPFGNP 180 YEG +PE+W+QFMN+Q PMMQGMM++YIEQSKN+F+QMQEQMQ+Q K+MF TFPF P Sbjct: 121 YEGNAMNPEVWSQFMNMQAPMMQGMMTSYIEQSKNMFVQMQEQMQNQAKSMFSTFPFKQP 180 Query: 181 GG 182 G Sbjct: 181 GA 182 >ref|YP_001808400.1| polyhydroxyalkonate synthesis repressor, PhaR [Burkholderia ambifaria MC40-6] gb|ACB64184.1| polyhydroxyalkonate synthesis repressor, PhaR [Burkholderia ambifaria MC40-6] Length = 188 Score = 304 bits (778), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 141/182 (77%), Positives = 160/182 (87%) Query: 1 MTTAKNSADRLIKKYPNRRLYDTQTSSYITLTDVKQLVLDNEEFTVVDAKSGDDLTRSIL 60 MTT K +A+RLIKKYPNRRLYDT+TS+YITLTDVKQLVL+ E+F VVDAKS +DLTRSIL Sbjct: 1 MTTTKKTAERLIKKYPNRRLYDTETSTYITLTDVKQLVLEQEDFKVVDAKSNEDLTRSIL 60 Query: 61 LQIILEEESHGVPMFSSGALSQIIRYYGHAMQGMMGNYLEKNIQTFIDIQNKLAENSKGF 120 LQIILEEES GVPMFSS LSQIIR+YGHAMQGMMG YLEKNIQ FIDIQNKLA+ SK Sbjct: 61 LQIILEEESGGVPMFSSSMLSQIIRFYGHAMQGMMGTYLEKNIQAFIDIQNKLADQSKNL 120 Query: 121 YEGKPFSPEMWTQFMNVQGPMMQGMMSNYIEQSKNLFIQMQEQMQSQTKNMFGTFPFGNP 180 YEG +PE+W+QFMN+Q PMMQGMM++YIEQSKN+F+QMQEQMQ+Q K+MF TFPF P Sbjct: 121 YEGNAMNPEVWSQFMNMQAPMMQGMMTSYIEQSKNMFVQMQEQMQNQAKSMFSTFPFKQP 180 Query: 181 GG 182 G Sbjct: 181 GA 182 >ref|YP_626127.1| polyhydroxyalkonate synthesis repressor, PhaR [Burkholderia cenocepacia AU 1054] ref|YP_835432.1| polyhydroxyalkonate synthesis repressor, PhaR [Burkholderia cenocepacia HI2424] gb|ABF81154.1| polyhydroxyalkonate synthesis repressor, PhaR [Burkholderia cenocepacia AU 1054] gb|ABK08539.1| polyhydroxyalkonate synthesis repressor, PhaR [Burkholderia cenocepacia HI2424] Length = 188 Score = 303 bits (776), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 141/182 (77%), Positives = 160/182 (87%) Query: 1 MTTAKNSADRLIKKYPNRRLYDTQTSSYITLTDVKQLVLDNEEFTVVDAKSGDDLTRSIL 60 MTT K +A+RLIKKYPNRRLYDT+TS+YITLTDVKQLVL+ E+F VVDAKS +DLTRSIL Sbjct: 1 MTTTKKTAERLIKKYPNRRLYDTETSTYITLTDVKQLVLEQEDFKVVDAKSNEDLTRSIL 60 Query: 61 LQIILEEESHGVPMFSSGALSQIIRYYGHAMQGMMGNYLEKNIQTFIDIQNKLAENSKGF 120 LQIILEEES GVPMFSS LSQIIR+YGHAMQGMMG YLEKNIQ FIDIQNKLA+ SK Sbjct: 61 LQIILEEESGGVPMFSSSMLSQIIRFYGHAMQGMMGTYLEKNIQAFIDIQNKLADQSKNL 120 Query: 121 YEGKPFSPEMWTQFMNVQGPMMQGMMSNYIEQSKNLFIQMQEQMQSQTKNMFGTFPFGNP 180 YEG +PE+W+QFMN+Q PMMQGMM++YIEQSKN+F+QMQEQMQ+Q K+MF TFPF P Sbjct: 121 YEGNAMNPEVWSQFMNMQAPMMQGMMTSYIEQSKNMFVQMQEQMQNQAKSMFSTFPFKQP 180 Query: 181 GG 182 G Sbjct: 181 GA 182