BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0035.0180.p         (139 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003776387.1| signal peptide protein [Herbaspirillum serop...   260   4e-68
ref|YP_001353089.1| hypothetical protein mma_1399 [Janthinobacte...   114   6e-24
ref|YP_001100194.1| hypothetical protein HEAR1920 [Herminiimonas...   107   7e-22
ref|YP_004752434.1| hypothetical protein CFU_1779 [Collimonas fu...    91   5e-17

>ref|YP_003776387.1| signal peptide protein [Herbaspirillum seropedicae SmR1]
 gb|ADJ64479.1| signal peptide protein [Herbaspirillum seropedicae SmR1]
          Length = 143

 Score =  260 bits (665), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 136/139 (97%), Positives = 138/139 (99%)

Query: 1   MLRRGLLAAALVLVSATAPAPSQAASSGPAANAAEGSLQQTLMTHALVLRGQIDGREIQL 60
           MLRRGLLAAAL LVSATAPAPS+AASSGPAANAAEGSLQQTLMTHALVLRGQIDGREIQL
Sbjct: 5   MLRRGLLAAALALVSATAPAPSEAASSGPAANAAEGSLQQTLMTHALVLRGQIDGREIQL 64

Query: 61  SLQPKKNEDGLEGRYFFFGGSPEILVAGEVDGDDLVMEESVNGKDVSGQWEGRRQGQSIT 120
           SLQPKKNEDGLEGRYFFFGGSPEILVAGEVDGDDL+MEESVNGKDVSGQWEGRRQGQSIT
Sbjct: 65  SLQPKKNEDGLEGRYFFFGGSPEILVAGEVDGDDLIMEESVNGKDVSGQWEGRRQGQSIT 124

Query: 121 GTWSSADGAVTKPFALQLP 139
           GTWSSADGAVTKPFALQLP
Sbjct: 125 GTWSSADGAVTKPFALQLP 143


>ref|YP_001353089.1| hypothetical protein mma_1399 [Janthinobacterium sp. Marseille]
 gb|ABR91299.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 162

 Score =  114 bits (284), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 53/115 (46%), Positives = 76/115 (66%), Gaps = 1/115 (0%)

Query: 24  AASSGPAANAAEGSLQQTLMTHALVLRGQIDGREIQLSLQPKKNED-GLEGRYFFFGGSP 82
           AA+  P    A GS    L    +  RG +    +Q++++PK + D G+EG YF FG S 
Sbjct: 24  AATDAPKPAVAAGSTVPALFHKPVFFRGVVGDINVQVNIRPKADIDEGIEGEYFIFGNSH 83

Query: 83  EILVAGEVDGDDLVMEESVNGKDVSGQWEGRRQGQSITGTWSSADGAVTKPFALQ 137
           +IL+AGE++GD L MEES NG ++SGQW+G+ +G S+ G+W SADG +TKPF L+
Sbjct: 84  KILLAGEIEGDQLFMEESENGTNISGQWDGKLEGDSLVGSWMSADGTITKPFTLK 138


>ref|YP_001100194.1| hypothetical protein HEAR1920 [Herminiimonas arsenicoxydans]
 emb|CAL62070.1| Conserved hypothetical protein [Herminiimonas arsenicoxydans]
          Length = 166

 Score =  107 bits (266), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 48/98 (48%), Positives = 71/98 (72%), Gaps = 1/98 (1%)

Query: 42  LMTHALVLRGQIDGREIQLSLQPKKNED-GLEGRYFFFGGSPEILVAGEVDGDDLVMEES 100
           L    + LRG +   ++Q+ ++PK   D G+EG YF FG S +IL+AGE++G+ L MEES
Sbjct: 47  LFLKPVTLRGTLGDTDVQVHIRPKAEIDEGIEGEYFIFGNSAKILLAGEIEGEILFMEES 106

Query: 101 VNGKDVSGQWEGRRQGQSITGTWSSADGAVTKPFALQL 138
            NG ++SGQW+G+ +G  ++GTW SADG+ TKPFAL++
Sbjct: 107 ENGTNISGQWDGKLEGDMLSGTWMSADGSFTKPFALKV 144


>ref|YP_004752434.1| hypothetical protein CFU_1779 [Collimonas fungivorans Ter331]
 gb|AEK61611.1| hypothetical protein CFU_1779 [Collimonas fungivorans Ter331]
          Length = 152

 Score = 90.9 bits (224), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 46/96 (47%), Positives = 62/96 (64%), Gaps = 1/96 (1%)

Query: 42  LMTHALVLRGQIDGREIQLSLQPKKN-EDGLEGRYFFFGGSPEILVAGEVDGDDLVMEES 100
           L    L LRG +   +I++ LQ K +  +G++G Y   G   +IL+AGE +  D++MEES
Sbjct: 44  LFAKPLTLRGTLGDAKIEMHLQLKPDPTEGIQGTYVVAGQGGKILLAGESENTDVIMEES 103

Query: 101 VNGKDVSGQWEGRRQGQSITGTWSSADGAVTKPFAL 136
           VNGKDVSG+W G   G +  GTWS+ D AVTKPF L
Sbjct: 104 VNGKDVSGEWAGTLVGDTFRGTWSTTDDAVTKPFVL 139