BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0035.0177.p (105 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776385.1| flagellar transcription activator protein [H... 214 5e-54 ref|YP_001353792.1| transcriptional activator FlhD [Janthinobact... 176 8e-43 ref|YP_001099594.1| transcriptional activator FlhD [Herminiimona... 176 1e-42 ref|ZP_08275669.1| Flagellar transcriptional activator flhD [Oxa... 169 1e-40 ref|YP_546051.1| transcriptional activator FlhD [Methylobacillus... 158 2e-37 ref|YP_003048699.1| transcriptional activator FlhD [Methylotener... 153 1e-35 ref|YP_003674650.1| flagellar transcriptional activator [Methylo... 152 2e-35 ref|YP_003049285.1| flagellar transcriptional activator [Methylo... 150 5e-35 ref|YP_003050568.1| transcriptional activator FlhD [Methylovorus... 148 3e-34 ref|YP_412000.1| transcriptional activator FlhD [Nitrosospira mu... 136 9e-31 >ref|YP_003776385.1| flagellar transcription activator protein [Herbaspirillum seropedicae SmR1] gb|ADJ64477.1| flagellar transcription activator protein [Herbaspirillum seropedicae SmR1] Length = 105 Score = 214 bits (544), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 105/105 (100%), Positives = 105/105 (100%) Query: 1 MNTNDMMAEIRDANLSYLMLAQQMIRSDKPTAIFRLGISAEIADLIEGLSNVQIMKLAAT 60 MNTNDMMAEIRDANLSYLMLAQQMIRSDKPTAIFRLGISAEIADLIEGLSNVQIMKLAAT Sbjct: 1 MNTNDMMAEIRDANLSYLMLAQQMIRSDKPTAIFRLGISAEIADLIEGLSNVQIMKLAAT 60 Query: 61 NMMLTRFRFDDGAILGMLTNYNKDKSLAQSHAAILMACQPSEQIS 105 NMMLTRFRFDDGAILGMLTNYNKDKSLAQSHAAILMACQPSEQIS Sbjct: 61 NMMLTRFRFDDGAILGMLTNYNKDKSLAQSHAAILMACQPSEQIS 105 >ref|YP_001353792.1| transcriptional activator FlhD [Janthinobacterium sp. Marseille] gb|ABR91323.1| flagellar transcriptional activator FlhD [Janthinobacterium sp. Marseille] Length = 105 Score = 176 bits (447), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 86/105 (81%), Positives = 93/105 (88%) Query: 1 MNTNDMMAEIRDANLSYLMLAQQMIRSDKPTAIFRLGISAEIADLIEGLSNVQIMKLAAT 60 M TND++AEIRDANL YLMLAQQMIRSDK TAIFRLGIS EIADLIEG++N QI+KLA Sbjct: 1 MTTNDIIAEIRDANLGYLMLAQQMIRSDKATAIFRLGISNEIADLIEGMNNAQILKLAGA 60 Query: 61 NMMLTRFRFDDGAILGMLTNYNKDKSLAQSHAAILMACQPSEQIS 105 NMML RFRFDDGAILGMLTNYNKD+SLA SHAAILMA Q EQI+ Sbjct: 61 NMMLARFRFDDGAILGMLTNYNKDRSLAHSHAAILMAGQAVEQIA 105 >ref|YP_001099594.1| transcriptional activator FlhD [Herminiimonas arsenicoxydans] emb|CAL61467.1| Transcriptional activator FlhD [Herminiimonas arsenicoxydans] Length = 105 Score = 176 bits (446), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 85/105 (80%), Positives = 93/105 (88%) Query: 1 MNTNDMMAEIRDANLSYLMLAQQMIRSDKPTAIFRLGISAEIADLIEGLSNVQIMKLAAT 60 M ND++AEIRDANL YLMLAQQMIR+DKPTAIFRLGIS EIADLIEG++N QI+KLA Sbjct: 1 MTNNDIIAEIRDANLGYLMLAQQMIRADKPTAIFRLGISNEIADLIEGMNNAQILKLAGA 60 Query: 61 NMMLTRFRFDDGAILGMLTNYNKDKSLAQSHAAILMACQPSEQIS 105 NMML RFRFDDGAILGMLTNYNKD+SLA SHAAILMA Q EQI+ Sbjct: 61 NMMLARFRFDDGAILGMLTNYNKDRSLAHSHAAILMAGQAVEQIA 105 >ref|ZP_08275669.1| Flagellar transcriptional activator flhD [Oxalobacteraceae bacterium IMCC9480] gb|EGF30858.1| Flagellar transcriptional activator flhD [Oxalobacteraceae bacterium IMCC9480] Length = 105 Score = 169 bits (428), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 80/105 (76%), Positives = 95/105 (90%) Query: 1 MNTNDMMAEIRDANLSYLMLAQQMIRSDKPTAIFRLGISAEIADLIEGLSNVQIMKLAAT 60 M+TN MMAEIRDANL YLMLAQQMIR+DK TAI+RLG+S+EIADLI GL+N QI+KL+ T Sbjct: 1 MDTNVMMAEIRDANLGYLMLAQQMIRADKATAIYRLGVSSEIADLIAGLNNAQILKLSGT 60 Query: 61 NMMLTRFRFDDGAILGMLTNYNKDKSLAQSHAAILMACQPSEQIS 105 +MML RFRF+DGAILGMLTNYNKD++L+QSHAAILMA Q E+I+ Sbjct: 61 SMMLARFRFEDGAILGMLTNYNKDRALSQSHAAILMASQGVEEIA 105 >ref|YP_546051.1| transcriptional activator FlhD [Methylobacillus flagellatus KT] gb|ABE50210.1| flagellar transcriptional activator [Methylobacillus flagellatus KT] Length = 105 Score = 158 bits (400), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 76/105 (72%), Positives = 92/105 (87%) Query: 1 MNTNDMMAEIRDANLSYLMLAQQMIRSDKPTAIFRLGISAEIADLIEGLSNVQIMKLAAT 60 MN ++MAEI+DANLSYLMLAQQMIR+DK +AIFRLG+S EIADL+EGLSN Q++KL++ Sbjct: 1 MNEQEIMAEIKDANLSYLMLAQQMIRADKASAIFRLGLSQEIADLLEGLSNAQLLKLSSF 60 Query: 61 NMMLTRFRFDDGAILGMLTNYNKDKSLAQSHAAILMACQPSEQIS 105 NMMLTRFRFDD AILGMLT+Y KD+ AQ+HAAILMA Q E+I+ Sbjct: 61 NMMLTRFRFDDTAILGMLTSYTKDRMQAQAHAAILMAGQGVEEIA 105 >ref|YP_003048699.1| transcriptional activator FlhD [Methylotenera mobilis JLW8] gb|ACT48172.1| flagellar transcriptional activator [Methylotenera mobilis JLW8] Length = 105 Score = 153 bits (386), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 73/104 (70%), Positives = 90/104 (86%) Query: 1 MNTNDMMAEIRDANLSYLMLAQQMIRSDKPTAIFRLGISAEIADLIEGLSNVQIMKLAAT 60 M ++M+EIRDANL+YLMLAQQ+IR+DK TAIFRLGIS+EIADL+EGLSN+Q++KL++ Sbjct: 1 MTEIELMSEIRDANLNYLMLAQQLIRADKATAIFRLGISSEIADLLEGLSNMQLVKLSSA 60 Query: 61 NMMLTRFRFDDGAILGMLTNYNKDKSLAQSHAAILMACQPSEQI 104 N+ML RFRFDD AILGMLTNY KD+S A HAAILM+ Q +E I Sbjct: 61 NVMLARFRFDDSAILGMLTNYTKDRSQAHLHAAILMSGQVTEAI 104 >ref|YP_003674650.1| flagellar transcriptional activator [Methylotenera versatilis 301] gb|ADI30073.1| flagellar transcriptional activator [Methylotenera versatilis 301] Length = 106 Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 73/105 (69%), Positives = 89/105 (84%) Query: 1 MNTNDMMAEIRDANLSYLMLAQQMIRSDKPTAIFRLGISAEIADLIEGLSNVQIMKLAAT 60 MN +MMAEI+DANL+YLMLAQQ+IRSDK TAIFRLGIS +IADL+EGLSN+Q++KL+ Sbjct: 1 MNEFEMMAEIKDANLNYLMLAQQLIRSDKATAIFRLGISKDIADLLEGLSNLQLLKLSNA 60 Query: 61 NMMLTRFRFDDGAILGMLTNYNKDKSLAQSHAAILMACQPSEQIS 105 NMML RFRFDD AILGMLTNY KD++ A H A+LMA Q +E ++ Sbjct: 61 NMMLARFRFDDSAILGMLTNYTKDRAQAHLHTAVLMAGQNAEAMA 105 >ref|YP_003049285.1| flagellar transcriptional activator [Methylotenera mobilis JLW8] gb|ACT48758.1| flagellar transcriptional activator [Methylotenera mobilis JLW8] Length = 105 Score = 150 bits (380), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 68/105 (64%), Positives = 90/105 (85%) Query: 1 MNTNDMMAEIRDANLSYLMLAQQMIRSDKPTAIFRLGISAEIADLIEGLSNVQIMKLAAT 60 MN DMM+EI+DANL+YLM+A+Q+I SDK TA+F LGIS EIADL+E LSN+Q++KL++T Sbjct: 1 MNVKDMMSEIKDANLNYLMMAKQLISSDKATAMFLLGISKEIADLLESLSNMQVVKLSST 60 Query: 61 NMMLTRFRFDDGAILGMLTNYNKDKSLAQSHAAILMACQPSEQIS 105 NMMLTRFRFDD A+LGMLT+Y+KD+ A H ++L+A Q +EQI+ Sbjct: 61 NMMLTRFRFDDSAVLGMLTDYSKDRDQAHLHTSVLLASQSAEQIT 105 >ref|YP_003050568.1| transcriptional activator FlhD [Methylovorus glucosetrophus SIP3-4] ref|YP_004039249.1| flagellar transcriptional activator [Methylovorus sp. MP688] gb|ACT50041.1| flagellar transcriptional activator [Methylovorus glucosetrophus SIP3-4] gb|ADQ84013.1| flagellar transcriptional activator [Methylovorus sp. MP688] Length = 105 Score = 148 bits (373), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 70/105 (66%), Positives = 87/105 (82%) Query: 1 MNTNDMMAEIRDANLSYLMLAQQMIRSDKPTAIFRLGISAEIADLIEGLSNVQIMKLAAT 60 M DMM++I+DANLSYLMLAQQMIRSDK +AIFRLG+S EIAD++E L+ Q++KL++T Sbjct: 1 MTEKDMMSDIKDANLSYLMLAQQMIRSDKASAIFRLGVSKEIADVLESLTTAQLLKLSST 60 Query: 61 NMMLTRFRFDDGAILGMLTNYNKDKSLAQSHAAILMACQPSEQIS 105 NMML RFRFDD AIL MLT+Y KD+ LA +HAAILMA Q E ++ Sbjct: 61 NMMLARFRFDDCAILNMLTSYTKDRHLASAHAAILMAGQAPEAMA 105 >ref|YP_412000.1| transcriptional activator FlhD [Nitrosospira multiformis ATCC 25196] gb|ABB74608.1| Flagellar transcriptional activator [Nitrosospira multiformis ATCC 25196] Length = 105 Score = 136 bits (343), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 66/105 (62%), Positives = 83/105 (79%) Query: 1 MNTNDMMAEIRDANLSYLMLAQQMIRSDKPTAIFRLGISAEIADLIEGLSNVQIMKLAAT 60 M N++ AEI+D NL+YLMLAQQM+ +DK AIFRLGIS +IAD++E L+ QI+KLA + Sbjct: 1 MQINELTAEIKDFNLTYLMLAQQMVIADKDMAIFRLGISKDIADILEVLTPGQILKLANS 60 Query: 61 NMMLTRFRFDDGAILGMLTNYNKDKSLAQSHAAILMACQPSEQIS 105 NMML R RFDD + GML NY KDK +AQSH AIL+A QP+E+IS Sbjct: 61 NMMLCRIRFDDNLVFGMLANYTKDKLMAQSHTAILLAGQPAEEIS 105