BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0035.0141.p (229 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776353.1| FtsH interacting integral membrane protein [... 446 e-123 ref|YP_001353822.1| hypothetical protein mma_2132 [Janthinobacte... 345 3e-93 ref|YP_001099561.1| hypothetical protein HEAR1259 [Herminiimonas... 345 4e-93 ref|ZP_07677053.1| membrane protein [Ralstonia sp. 5_7_47FAA] >g... 340 7e-92 ref|YP_002981110.1| hypothetical protein Rpic12D_1146 [Ralstonia... 340 1e-91 ref|NP_519331.1| hypothetical protein RSc1210 [Ralstonia solanac... 338 5e-91 ref|YP_001898634.1| hypothetical protein Rpic_1054 [Ralstonia pi... 337 9e-91 ref|ZP_08275718.1| Integral membrane protein, interacts with Fts... 336 2e-90 ref|ZP_02379432.1| hypothetical protein BuboB_17002 [Burkholderi... 335 4e-90 emb|CBJ38458.1| conserved membrane protein of unknown function, ... 335 4e-90 >ref|YP_003776353.1| FtsH interacting integral membrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ64445.1| FtsH interacting integral membrane protein [Herbaspirillum seropedicae SmR1] Length = 229 Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust. Identities = 228/229 (99%), Positives = 229/229 (100%) Query: 1 MNNLDTTFGHSTTSLATRNRVLRNTYWLLALSMIPTVLGAWLGVQLHFSLFAGSPMISFV 60 MNNLDTTFGHSTTSLATRNRVLRNTYWLLALSMIPTVLGAWLGVQLHFSLFAGSPMISFV Sbjct: 1 MNNLDTTFGHSTTSLATRNRVLRNTYWLLALSMIPTVLGAWLGVQLHFSLFAGSPMISFV 60 Query: 61 LFLAIAFGFFYAIEKTKNSGLGVAFLLGFTFFMGLMLSRLIEFTLGFSNGAGLIMTAFGG 120 LFLAIAFGFFYAIEKTKNSGLGVAFLLGFTFFMGLMLSRLIEFTLGFSNGAGLIMTAFGG Sbjct: 61 LFLAIAFGFFYAIEKTKNSGLGVAFLLGFTFFMGLMLSRLIEFTLGFSNGAGLIMTAFGG 120 Query: 121 TAIIFCGMATIATVSKRDFSGLGKWLFAGVLVILVAALANIFLQLPALQLTISVVAIAIF 180 TAIIFCGMATIATVSKRDFSGLGKWLFAGVLVILVAALANIFLQLPALQLTIS+VAIAIF Sbjct: 121 TAIIFCGMATIATVSKRDFSGLGKWLFAGVLVILVAALANIFLQLPALQLTISMVAIAIF 180 Query: 181 SAYILFDVQQVVNGGETNYISATLAIYLDVYNVFANLLSILGIVGGNRD 229 SAYILFDVQQVVNGGETNYISATLAIYLDVYNVFANLLSILGIVGGNRD Sbjct: 181 SAYILFDVQQVVNGGETNYISATLAIYLDVYNVFANLLSILGIVGGNRD 229 >ref|YP_001353822.1| hypothetical protein mma_2132 [Janthinobacterium sp. Marseille] gb|ABR89365.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 230 Score = 345 bits (885), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 174/230 (75%), Positives = 199/230 (86%), Gaps = 1/230 (0%) Query: 1 MNNLDTT-FGHSTTSLATRNRVLRNTYWLLALSMIPTVLGAWLGVQLHFSLFAGSPMISF 59 M+NL FG + + A R+RVLRNTYWLLALSMIPTVLGAW+GVQ F+ FAGSP + Sbjct: 1 MSNLQQQAFGSTYDTTAVRHRVLRNTYWLLALSMIPTVLGAWIGVQFKFAFFAGSPFMGM 60 Query: 60 VLFLAIAFGFFYAIEKTKNSGLGVAFLLGFTFFMGLMLSRLIEFTLGFSNGAGLIMTAFG 119 ++FLAIAFGFFYAIEKTKNSGLGVA LLGFTFFMGLMLSRLI LGF+NG LIMTAFG Sbjct: 61 IIFLAIAFGFFYAIEKTKNSGLGVALLLGFTFFMGLMLSRLIGHILGFANGTSLIMTAFG 120 Query: 120 GTAIIFCGMATIATVSKRDFSGLGKWLFAGVLVILVAALANIFLQLPALQLTISVVAIAI 179 GTA I MAT+ATVSKRDFSGLGKWLF GVLVI+VAA+ANI+LQLPALQLTISVVAI I Sbjct: 121 GTAAILATMATVATVSKRDFSGLGKWLFMGVLVIIVAAIANIWLQLPALQLTISVVAIGI 180 Query: 180 FSAYILFDVQQVVNGGETNYISATLAIYLDVYNVFANLLSILGIVGGNRD 229 FSA+IL+DVQ+++NGGETNY++ATL IYL VYN+F+NLL++LGI GG RD Sbjct: 181 FSAFILYDVQRIINGGETNYVTATLGIYLSVYNIFSNLLALLGIFGGERD 230 >ref|YP_001099561.1| hypothetical protein HEAR1259 [Herminiimonas arsenicoxydans] emb|CAL61434.1| conserved hypothetical protein; putative membrane protein [Herminiimonas arsenicoxydans] Length = 229 Score = 345 bits (884), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 175/229 (76%), Positives = 198/229 (86%) Query: 1 MNNLDTTFGHSTTSLATRNRVLRNTYWLLALSMIPTVLGAWLGVQLHFSLFAGSPMISFV 60 M+NL T+G + +TR+RVLRNTYWLLALSMIPTVLGAWLGVQ F+ FA SP + + Sbjct: 1 MSNLQQTYGSTYDITSTRHRVLRNTYWLLALSMIPTVLGAWLGVQFKFAFFAASPFMGMM 60 Query: 61 LFLAIAFGFFYAIEKTKNSGLGVAFLLGFTFFMGLMLSRLIEFTLGFSNGAGLIMTAFGG 120 +FLAIAFGFFYAIEK KNSGLGVA LLGFTFFMGLMLSRLI LGF+NG LIMTAFGG Sbjct: 61 VFLAIAFGFFYAIEKFKNSGLGVALLLGFTFFMGLMLSRLIGHILGFANGTSLIMTAFGG 120 Query: 121 TAIIFCGMATIATVSKRDFSGLGKWLFAGVLVILVAALANIFLQLPALQLTISVVAIAIF 180 TA I MAT+ATVSKRDFSGLGKWLF GVLVI+VAA+ANI+LQLPALQLTISVVAI IF Sbjct: 121 TAAILGVMATVATVSKRDFSGLGKWLFMGVLVIIVAAIANIWLQLPALQLTISVVAIGIF 180 Query: 181 SAYILFDVQQVVNGGETNYISATLAIYLDVYNVFANLLSILGIVGGNRD 229 SA+IL+DVQ+++NGGETNY++ATL IYL VYN+FANLLS+LGI GG RD Sbjct: 181 SAFILYDVQRIINGGETNYVTATLGIYLSVYNIFANLLSLLGIFGGERD 229 >ref|ZP_07677053.1| membrane protein [Ralstonia sp. 5_7_47FAA] gb|EFP64614.1| membrane protein [Ralstonia sp. 5_7_47FAA] Length = 233 Score = 340 bits (873), Expect = 7e-92, Method: Compositional matrix adjust. Identities = 176/231 (76%), Positives = 203/231 (87%), Gaps = 3/231 (1%) Query: 2 NNLDTT-FGHSTTS--LATRNRVLRNTYWLLALSMIPTVLGAWLGVQLHFSLFAGSPMIS 58 N L+T FG S T+ LA RNRVLRNTYWLLALSMIPT+LGAW+GV F+L +P++ Sbjct: 3 NQLNTYGFGASGTAGALAVRNRVLRNTYWLLALSMIPTILGAWIGVATEFNLMGRNPLMG 62 Query: 59 FVLFLAIAFGFFYAIEKTKNSGLGVAFLLGFTFFMGLMLSRLIEFTLGFSNGAGLIMTAF 118 FV+F+A+AFGFFYAIE+ KNSGLGVA LLGFTFFMGLMLSRLI LGFSNGA LIMTAF Sbjct: 63 FVIFMAVAFGFFYAIERFKNSGLGVALLLGFTFFMGLMLSRLIGMILGFSNGASLIMTAF 122 Query: 119 GGTAIIFCGMATIATVSKRDFSGLGKWLFAGVLVILVAALANIFLQLPALQLTISVVAIA 178 GGTAIIF MAT+ATVSKRDFSGLGKWLF GVLV++V ++ANI+LQLPA+ LTISV+AIA Sbjct: 123 GGTAIIFGVMATVATVSKRDFSGLGKWLFMGVLVLIVGSVANIWLQLPAMMLTISVLAIA 182 Query: 179 IFSAYILFDVQQVVNGGETNYISATLAIYLDVYNVFANLLSILGIVGGNRD 229 IFSAYILFDVQ++VNGGETNY++ATLAIYLDVYN+F NLL+ILGI GGNR+ Sbjct: 183 IFSAYILFDVQRIVNGGETNYVTATLAIYLDVYNIFTNLLAILGIFGGNRN 233 >ref|YP_002981110.1| hypothetical protein Rpic12D_1146 [Ralstonia pickettii 12D] gb|ACS62438.1| protein of unknown function UPF0005 [Ralstonia pickettii 12D] Length = 233 Score = 340 bits (871), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 175/231 (75%), Positives = 203/231 (87%), Gaps = 3/231 (1%) Query: 2 NNLDTT-FGHSTTS--LATRNRVLRNTYWLLALSMIPTVLGAWLGVQLHFSLFAGSPMIS 58 N L+T FG S T+ LA RNRVLRNTYWLLALSMIPT+LGAW+GV F+L +P++ Sbjct: 3 NQLNTYGFGASGTAGALAVRNRVLRNTYWLLALSMIPTILGAWIGVATEFNLMGRNPLMG 62 Query: 59 FVLFLAIAFGFFYAIEKTKNSGLGVAFLLGFTFFMGLMLSRLIEFTLGFSNGAGLIMTAF 118 FV+F+A+AFGFFYAIE+ KNSGLGVA LLGFTFFMGLMLSRLI LGFSNGA L+MTAF Sbjct: 63 FVIFMAVAFGFFYAIERFKNSGLGVALLLGFTFFMGLMLSRLIGMILGFSNGASLVMTAF 122 Query: 119 GGTAIIFCGMATIATVSKRDFSGLGKWLFAGVLVILVAALANIFLQLPALQLTISVVAIA 178 GGTAIIF MAT+ATVSKRDFSGLGKWLF GVLV++V ++ANI+LQLPA+ LTISV+AIA Sbjct: 123 GGTAIIFGVMATVATVSKRDFSGLGKWLFMGVLVLIVGSVANIWLQLPAMMLTISVLAIA 182 Query: 179 IFSAYILFDVQQVVNGGETNYISATLAIYLDVYNVFANLLSILGIVGGNRD 229 IFSAYILFDVQ++VNGGETNY++ATLAIYLDVYN+F NLL+ILGI GGNR+ Sbjct: 183 IFSAYILFDVQRIVNGGETNYVTATLAIYLDVYNIFTNLLAILGIFGGNRN 233 >ref|NP_519331.1| hypothetical protein RSc1210 [Ralstonia solanacearum GMI1000] emb|CAD14912.1| probable transmembrane protein [Ralstonia solanacearum GMI1000] Length = 233 Score = 338 bits (866), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 173/231 (74%), Positives = 202/231 (87%), Gaps = 3/231 (1%) Query: 2 NNLDTT-FGHSTTS--LATRNRVLRNTYWLLALSMIPTVLGAWLGVQLHFSLFAGSPMIS 58 N L+T FG S T+ LA RNRVLRNTYWLLALSMIPT+LGAW+GV F+L AG P++ Sbjct: 3 NQLNTYGFGASGTAGALAVRNRVLRNTYWLLALSMIPTILGAWIGVATGFNLMAGRPLMG 62 Query: 59 FVLFLAIAFGFFYAIEKTKNSGLGVAFLLGFTFFMGLMLSRLIEFTLGFSNGAGLIMTAF 118 F++F+ +AFGFFYAIE+ KNSG+GVA LLGFTFFMGLMLSRLI LGFSNGA LIMTAF Sbjct: 63 FLIFMGVAFGFFYAIERFKNSGMGVALLLGFTFFMGLMLSRLIGMILGFSNGAALIMTAF 122 Query: 119 GGTAIIFCGMATIATVSKRDFSGLGKWLFAGVLVILVAALANIFLQLPALQLTISVVAIA 178 GGTA IF MAT+ATVSKRDFSGLGKWLF GVLV++V ++ANI+LQLP++ LTISV+AIA Sbjct: 123 GGTATIFAVMATVATVSKRDFSGLGKWLFMGVLVLIVGSVANIWLQLPSMMLTISVLAIA 182 Query: 179 IFSAYILFDVQQVVNGGETNYISATLAIYLDVYNVFANLLSILGIVGGNRD 229 IFSAYIL+DVQ++VNGGETNY++ATLAIYLDVYNVF NLL+ILGI GGNR+ Sbjct: 183 IFSAYILYDVQRIVNGGETNYVTATLAIYLDVYNVFTNLLAILGIFGGNRN 233 >ref|YP_001898634.1| hypothetical protein Rpic_1054 [Ralstonia pickettii 12J] gb|ACD26202.1| protein of unknown function UPF0005 [Ralstonia pickettii 12J] Length = 233 Score = 337 bits (864), Expect = 9e-91, Method: Compositional matrix adjust. Identities = 175/231 (75%), Positives = 202/231 (87%), Gaps = 3/231 (1%) Query: 2 NNLDTT-FGHSTTS--LATRNRVLRNTYWLLALSMIPTVLGAWLGVQLHFSLFAGSPMIS 58 N L+T FG S T+ LA RNRVLRNTYWLLALSMIPT+LGAW+GV F+L +P++ Sbjct: 3 NQLNTYGFGASGTAGALAVRNRVLRNTYWLLALSMIPTILGAWIGVATGFNLMGRNPLMG 62 Query: 59 FVLFLAIAFGFFYAIEKTKNSGLGVAFLLGFTFFMGLMLSRLIEFTLGFSNGAGLIMTAF 118 FV+F+A+AFGFFYAIE+ KNS LGVA LLGFTFFMGLMLSRLI LGFSNGA LIMTAF Sbjct: 63 FVIFMAVAFGFFYAIERFKNSSLGVALLLGFTFFMGLMLSRLIGMILGFSNGASLIMTAF 122 Query: 119 GGTAIIFCGMATIATVSKRDFSGLGKWLFAGVLVILVAALANIFLQLPALQLTISVVAIA 178 GGTAIIF MAT+ATVSKRDFSGLGKWLF GVLV++V ++ANI+LQLPA+ LTISV+AIA Sbjct: 123 GGTAIIFGVMATVATVSKRDFSGLGKWLFMGVLVLIVGSVANIWLQLPAMMLTISVLAIA 182 Query: 179 IFSAYILFDVQQVVNGGETNYISATLAIYLDVYNVFANLLSILGIVGGNRD 229 IFSAYILFDVQ++VNGGETNY++ATLAIYLDVYN+F NLL+ILGI GGNR+ Sbjct: 183 IFSAYILFDVQRIVNGGETNYVTATLAIYLDVYNIFTNLLAILGIFGGNRN 233 >ref|ZP_08275718.1| Integral membrane protein, interacts with FtsH [Oxalobacteraceae bacterium IMCC9480] gb|EGF30805.1| Integral membrane protein, interacts with FtsH [Oxalobacteraceae bacterium IMCC9480] Length = 230 Score = 336 bits (861), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 165/228 (72%), Positives = 195/228 (85%) Query: 2 NNLDTTFGHSTTSLATRNRVLRNTYWLLALSMIPTVLGAWLGVQLHFSLFAGSPMISFVL 61 + D T+ + + +RV+RNTYWLLALSMIP++ GAWLGVQL+FSLFAGSP I F+L Sbjct: 3 QHYDQTYSSPAVTRSAGHRVMRNTYWLLALSMIPSIFGAWLGVQLNFSLFAGSPFIGFML 62 Query: 62 FLAIAFGFFYAIEKTKNSGLGVAFLLGFTFFMGLMLSRLIEFTLGFSNGAGLIMTAFGGT 121 F+ IA+GFFYAIEKTK +G+GV LLGFTFFMGLMLSRLI TLG++NG+ L+MTAFGGT Sbjct: 63 FMGIAYGFFYAIEKTKETGMGVVVLLGFTFFMGLMLSRLIAHTLGYANGSTLVMTAFGGT 122 Query: 122 AIIFCGMATIATVSKRDFSGLGKWLFAGVLVILVAALANIFLQLPALQLTISVVAIAIFS 181 A I MATIATVSKRDFSG+G+WLF G+LVILVAA+ANIFLQ+PAL L +SV+AI IFS Sbjct: 123 ATIMGVMATIATVSKRDFSGMGRWLFVGMLVILVAAVANIFLQMPALYLVVSVLAIGIFS 182 Query: 182 AYILFDVQQVVNGGETNYISATLAIYLDVYNVFANLLSILGIVGGNRD 229 AYIL DVQQV+NGGETNYI+ATL IYLDVYN+FANLL++LGI GG RD Sbjct: 183 AYILHDVQQVINGGETNYITATLHIYLDVYNIFANLLALLGIFGGQRD 230 >ref|ZP_02379432.1| hypothetical protein BuboB_17002 [Burkholderia ubonensis Bu] Length = 232 Score = 335 bits (858), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 174/232 (75%), Positives = 197/232 (84%), Gaps = 3/232 (1%) Query: 1 MNNLDTTFGH--STTSLATRNRVLRNTYWLLALSMIPTVLGAWLGVQLHFSLFAG-SPMI 57 MN+ FG S +++ RNRVLRNTYWLLALSM+PTVLGAW+GV FSLFA SPM+ Sbjct: 1 MNDYPYNFGRGGSVSTVEVRNRVLRNTYWLLALSMVPTVLGAWVGVATGFSLFAATSPMM 60 Query: 58 SFVLFLAIAFGFFYAIEKTKNSGLGVAFLLGFTFFMGLMLSRLIEFTLGFSNGAGLIMTA 117 S + F AIAFGF +AIE+TKNS GV LLGFTFFMGLMLSRL+ F LGFSNG LIM A Sbjct: 61 SLLAFFAIAFGFMFAIERTKNSAAGVFVLLGFTFFMGLMLSRLLSFILGFSNGPSLIMLA 120 Query: 118 FGGTAIIFCGMATIATVSKRDFSGLGKWLFAGVLVILVAALANIFLQLPALQLTISVVAI 177 FGGT IIF MATIATVSKRDFSGLGKWLF GV+VIL+A++ANIFLQLPAL LT+SV+AI Sbjct: 121 FGGTGIIFAAMATIATVSKRDFSGLGKWLFMGVIVILLASVANIFLQLPALMLTVSVLAI 180 Query: 178 AIFSAYILFDVQQVVNGGETNYISATLAIYLDVYNVFANLLSILGIVGGNRD 229 AIFSAY+LFDVQ+VVNGGETNYISATLAIYLD+YNVF NLL++LGI GGNR+ Sbjct: 181 AIFSAYMLFDVQRVVNGGETNYISATLAIYLDLYNVFTNLLALLGIFGGNRN 232 >emb|CBJ38458.1| conserved membrane protein of unknown function, UPF0005 [Ralstonia solanacearum CMR15] Length = 233 Score = 335 bits (858), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 172/231 (74%), Positives = 201/231 (87%), Gaps = 3/231 (1%) Query: 2 NNLDTT-FGHSTTS--LATRNRVLRNTYWLLALSMIPTVLGAWLGVQLHFSLFAGSPMIS 58 N L+T FG S T+ LA RNRVLRNTYWLLALSMIPT+LGAW+GV F+L AG P++ Sbjct: 3 NQLNTYGFGASGTAGALAVRNRVLRNTYWLLALSMIPTILGAWIGVATGFNLMAGRPLMG 62 Query: 59 FVLFLAIAFGFFYAIEKTKNSGLGVAFLLGFTFFMGLMLSRLIEFTLGFSNGAGLIMTAF 118 F++F+ +AFGFFYAIE+ KNS +GVA LLGFTFFMGLMLSRLI LGFSNGA LIMTAF Sbjct: 63 FLIFMGVAFGFFYAIERFKNSSVGVALLLGFTFFMGLMLSRLIGMILGFSNGAALIMTAF 122 Query: 119 GGTAIIFCGMATIATVSKRDFSGLGKWLFAGVLVILVAALANIFLQLPALQLTISVVAIA 178 GGTA IF MAT+ATVSKRDFSGLGKWLF GVLV++V ++ANI+LQLP++ LTISV+AIA Sbjct: 123 GGTATIFTVMATVATVSKRDFSGLGKWLFMGVLVLIVGSVANIWLQLPSMMLTISVLAIA 182 Query: 179 IFSAYILFDVQQVVNGGETNYISATLAIYLDVYNVFANLLSILGIVGGNRD 229 IFSAYIL+DVQ++VNGGETNY++ATLAIYLDVYNVF NLL+ILGI GGNR+ Sbjct: 183 IFSAYILYDVQRIVNGGETNYVTATLAIYLDVYNVFTNLLAILGIFGGNRN 233