BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0035.0137.p (420 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776349.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate ... 860 0.0 ref|YP_004752570.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphospha... 773 0.0 ref|YP_001353817.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate ... 750 0.0 ref|YP_001099566.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate ... 744 0.0 ref|ZP_08275723.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphat... 729 0.0 ref|YP_584254.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate syn... 704 0.0 ref|YP_004686088.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate ... 698 0.0 ref|YP_726827.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate syn... 696 0.0 ref|YP_002005913.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate ... 696 0.0 emb|CBJ38463.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synt... 694 0.0 >ref|YP_003776349.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Herbaspirillum seropedicae SmR1] gb|ADJ64441.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase protein [Herbaspirillum seropedicae SmR1] Length = 420 Score = 860 bits (2223), Expect = 0.0, Method: Compositional matrix adjust. Identities = 419/420 (99%), Positives = 419/420 (99%) Query: 1 MSSSPIASGPLVRRNSRRVVISHGGREIVVGGGAPVMVQSMTNTDTADAIGTAIQIKDLA 60 MSSSPIASGPLVRRNSRRVVISHGGREIVVGGGAPVMVQSMTNTDTADAIGTAIQIKDLA Sbjct: 1 MSSSPIASGPLVRRNSRRVVISHGGREIVVGGGAPVMVQSMTNTDTADAIGTAIQIKDLA 60 Query: 61 RAGSEVVRLTVNTPEAAAAVPAIREQLDRMGVDVPLVGDFHYNGHTLLTEYPECAQALSK 120 RAGSEVVRLTVNTPEAAAAVPAIREQLDRMGVDVPLVGDFHYNGHTLLTEYPECAQALSK Sbjct: 61 RAGSEVVRLTVNTPEAAAAVPAIREQLDRMGVDVPLVGDFHYNGHTLLTEYPECAQALSK 120 Query: 121 YRINPGNVGKGAKRDTQFAQMIEVACKYDKPVRIGVNWGSLDQALLARIMDENADRAEPW 180 YRINPGNVGKGAKRDTQFAQMIEVACKYDKPVRIGVNWGSLDQALLARIMDENA RAEPW Sbjct: 121 YRINPGNVGKGAKRDTQFAQMIEVACKYDKPVRIGVNWGSLDQALLARIMDENAGRAEPW 180 Query: 181 SAQAVMYEALVTSAIENAQRAEELGMAGDKIILSCKVSGVQDLIAVYRELARRCDYPLHL 240 SAQAVMYEALVTSAIENAQRAEELGMAGDKIILSCKVSGVQDLIAVYRELARRCDYPLHL Sbjct: 181 SAQAVMYEALVTSAIENAQRAEELGMAGDKIILSCKVSGVQDLIAVYRELARRCDYPLHL 240 Query: 241 GLTEAGMGSKGIVASTAALSVLLQEGIGDTIRISLTPEPGGDRTKEVVVGQEILQTMGLR 300 GLTEAGMGSKGIVASTAALSVLLQEGIGDTIRISLTPEPGGDRTKEVVVGQEILQTMGLR Sbjct: 241 GLTEAGMGSKGIVASTAALSVLLQEGIGDTIRISLTPEPGGDRTKEVVVGQEILQTMGLR 300 Query: 301 KFTPMVIACPGCGRTTSTVFQDLADKIQTFLREQMPVWKGKYPGVEAMNVAVMGCIVNGP 360 KFTPMVIACPGCGRTTSTVFQDLADKIQTFLREQMPVWKGKYPGVEAMNVAVMGCIVNGP Sbjct: 301 KFTPMVIACPGCGRTTSTVFQDLADKIQTFLREQMPVWKGKYPGVEAMNVAVMGCIVNGP 360 Query: 361 GESKHANIGISLPGTGESPAAPVFIDGEKKMTLRGEHIAEEFQKVVLDYVESHYGQGHPA 420 GESKHANIGISLPGTGESPAAPVFIDGEKKMTLRGEHIAEEFQKVVLDYVESHYGQGHPA Sbjct: 361 GESKHANIGISLPGTGESPAAPVFIDGEKKMTLRGEHIAEEFQKVVLDYVESHYGQGHPA 420 >ref|YP_004752570.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Collimonas fungivorans Ter331] gb|AEK61747.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Collimonas fungivorans Ter331] Length = 500 Score = 773 bits (1997), Expect = 0.0, Method: Compositional matrix adjust. Identities = 371/412 (90%), Positives = 393/412 (95%) Query: 5 PIASGPLVRRNSRRVVISHGGREIVVGGGAPVMVQSMTNTDTADAIGTAIQIKDLARAGS 64 PI SGP VRR SR IS+G R+I+VGGGAPV+VQSMTNTDTADAIGTAIQIKDLARAGS Sbjct: 86 PIGSGPSVRRLSRGATISYGERKIMVGGGAPVVVQSMTNTDTADAIGTAIQIKDLARAGS 145 Query: 65 EVVRLTVNTPEAAAAVPAIREQLDRMGVDVPLVGDFHYNGHTLLTEYPECAQALSKYRIN 124 E+VR+TVN PEAAAAVPAIREQLD+MG+DVPLVGDFHYNGHTLL ++PECAQALSKYRIN Sbjct: 146 ELVRITVNNPEAAAAVPAIREQLDKMGIDVPLVGDFHYNGHTLLNDFPECAQALSKYRIN 205 Query: 125 PGNVGKGAKRDTQFAQMIEVACKYDKPVRIGVNWGSLDQALLARIMDENADRAEPWSAQA 184 PGNVGKGAKRDTQ+AQMIE AC+YDKPVRIGVNWGSLDQALLARIMDENA R++PW AQA Sbjct: 206 PGNVGKGAKRDTQYAQMIEAACRYDKPVRIGVNWGSLDQALLARIMDENALRSQPWLAQA 265 Query: 185 VMYEALVTSAIENAQRAEELGMAGDKIILSCKVSGVQDLIAVYRELARRCDYPLHLGLTE 244 VMYEALVTSAIENAQRAEELG+A D+IILSCKVSGVQDLIAVYRELARRCDYPLHLGLTE Sbjct: 266 VMYEALVTSAIENAQRAEELGLAADRIILSCKVSGVQDLIAVYRELARRCDYPLHLGLTE 325 Query: 245 AGMGSKGIVASTAALSVLLQEGIGDTIRISLTPEPGGDRTKEVVVGQEILQTMGLRKFTP 304 AGMGSKGIVASTAALSVLLQEGIGDTIRISLTPEPGGDRT+EV+VGQEILQTMGLRKF P Sbjct: 326 AGMGSKGIVASTAALSVLLQEGIGDTIRISLTPEPGGDRTREVIVGQEILQTMGLRKFAP 385 Query: 305 MVIACPGCGRTTSTVFQDLADKIQTFLREQMPVWKGKYPGVEAMNVAVMGCIVNGPGESK 364 MVIACPGCGRTTSTVFQDLADKIQT+LR+QMPVWK YPGVE MNVAVMGCIVNGPGESK Sbjct: 386 MVIACPGCGRTTSTVFQDLADKIQTYLRDQMPVWKKAYPGVEGMNVAVMGCIVNGPGESK 445 Query: 365 HANIGISLPGTGESPAAPVFIDGEKKMTLRGEHIAEEFQKVVLDYVESHYGQ 416 HANIGISLPGTGESPAAPVFIDGEKK+TLRGE IAEEFQ VVLDYV+SHYGQ Sbjct: 446 HANIGISLPGTGESPAAPVFIDGEKKLTLRGERIAEEFQAVVLDYVKSHYGQ 497 >ref|YP_001353817.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Janthinobacterium sp. Marseille] gb|ABR88560.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Janthinobacterium sp. Marseille] Length = 423 Score = 750 bits (1937), Expect = 0.0, Method: Compositional matrix adjust. Identities = 356/415 (85%), Positives = 391/415 (94%) Query: 2 SSSPIASGPLVRRNSRRVVISHGGREIVVGGGAPVMVQSMTNTDTADAIGTAIQIKDLAR 61 SS+PIA+GP+ RR SR V+S+GGRE+ +GG APV+VQSMTNTDTAD IGTAIQIK+LAR Sbjct: 3 SSNPIATGPVTRRQSRVAVVSYGGREVRIGGDAPVVVQSMTNTDTADIIGTAIQIKELAR 62 Query: 62 AGSEVVRLTVNTPEAAAAVPAIREQLDRMGVDVPLVGDFHYNGHTLLTEYPECAQALSKY 121 AGSE+VR+TVNTPEAAAAVP I EQLD+M + VPLVGDFHYNGH LL +YP+CA+AL+KY Sbjct: 63 AGSELVRITVNTPEAAAAVPEICEQLDKMDIVVPLVGDFHYNGHKLLNDYPDCAKALAKY 122 Query: 122 RINPGNVGKGAKRDTQFAQMIEVACKYDKPVRIGVNWGSLDQALLARIMDENADRAEPWS 181 RINPGNVGKG KRDTQFAQMIE AC++DKPVRIGVNWGSLDQ LLARIMDENA R+ PWS Sbjct: 123 RINPGNVGKGNKRDTQFAQMIETACRFDKPVRIGVNWGSLDQELLARIMDENAARSTPWS 182 Query: 182 AQAVMYEALVTSAIENAQRAEELGMAGDKIILSCKVSGVQDLIAVYRELARRCDYPLHLG 241 AQAVMYEALVTSAIENA RAEE+G+AGD+IILSCKVSGVQDLIAVYRELARRCDYPLHLG Sbjct: 183 AQAVMYEALVTSAIENAMRAEEVGLAGDRIILSCKVSGVQDLIAVYRELARRCDYPLHLG 242 Query: 242 LTEAGMGSKGIVASTAALSVLLQEGIGDTIRISLTPEPGGDRTKEVVVGQEILQTMGLRK 301 LTEAGMGSKGIVASTAALSVLLQEGIGDTIRISLTPEPGGDRTKEV+VGQEILQTMGLRK Sbjct: 243 LTEAGMGSKGIVASTAALSVLLQEGIGDTIRISLTPEPGGDRTKEVIVGQEILQTMGLRK 302 Query: 302 FTPMVIACPGCGRTTSTVFQDLADKIQTFLREQMPVWKGKYPGVEAMNVAVMGCIVNGPG 361 FTPMVIACPGCGRTTSTVFQ+LAD IQT+LR+QMPVWK +YPGVEAMNVAVMGCIVNGPG Sbjct: 303 FTPMVIACPGCGRTTSTVFQELADGIQTYLRDQMPVWKKEYPGVEAMNVAVMGCIVNGPG 362 Query: 362 ESKHANIGISLPGTGESPAAPVFIDGEKKMTLRGEHIAEEFQKVVLDYVESHYGQ 416 ESKHANIGISLPGTGESPAAPVF+DGEK +TLRG++IAEEF +VLDYV+SHYG+ Sbjct: 363 ESKHANIGISLPGTGESPAAPVFVDGEKTVTLRGDNIAEEFHAIVLDYVKSHYGK 417 >ref|YP_001099566.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Herminiimonas arsenicoxydans] emb|CAL61439.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase) [Herminiimonas arsenicoxydans] Length = 425 Score = 744 bits (1922), Expect = 0.0, Method: Compositional matrix adjust. Identities = 355/415 (85%), Positives = 388/415 (93%) Query: 2 SSSPIASGPLVRRNSRRVVISHGGREIVVGGGAPVMVQSMTNTDTADAIGTAIQIKDLAR 61 SS PIA+GP RR SR V+S+GGRE+ +GG APV+VQSMTNTDTAD IGTAIQIK+LAR Sbjct: 3 SSDPIATGPFSRRKSRIAVVSYGGREVRIGGDAPVVVQSMTNTDTADVIGTAIQIKELAR 62 Query: 62 AGSEVVRLTVNTPEAAAAVPAIREQLDRMGVDVPLVGDFHYNGHTLLTEYPECAQALSKY 121 AGSE+VR+TVNTPEAAAAVPAI EQLD+M V VPLVGDFHYNGHTLL +YP+CA+AL+KY Sbjct: 63 AGSEMVRITVNTPEAAAAVPAICEQLDKMDVVVPLVGDFHYNGHTLLNDYPDCAKALAKY 122 Query: 122 RINPGNVGKGAKRDTQFAQMIEVACKYDKPVRIGVNWGSLDQALLARIMDENADRAEPWS 181 RINPGNVGKG KRDTQFAQMIE AC++DKPVRIGVNWGSLDQ LLARIMDENA RA PW+ Sbjct: 123 RINPGNVGKGNKRDTQFAQMIETACRFDKPVRIGVNWGSLDQELLARIMDENAARAHPWT 182 Query: 182 AQAVMYEALVTSAIENAQRAEELGMAGDKIILSCKVSGVQDLIAVYRELARRCDYPLHLG 241 AQAVMYEALVTSAIENA RAEE+G+AGD+IILSCKVSGVQDLIAVYRELARRCDYPLHLG Sbjct: 183 AQAVMYEALVTSAIENAMRAEEVGLAGDRIILSCKVSGVQDLIAVYRELARRCDYPLHLG 242 Query: 242 LTEAGMGSKGIVASTAALSVLLQEGIGDTIRISLTPEPGGDRTKEVVVGQEILQTMGLRK 301 LTEAGMGSKGIVASTAALSVLLQEGIGDTIRISLTPEPGGDRT+EV+VGQEILQTMGLRK Sbjct: 243 LTEAGMGSKGIVASTAALSVLLQEGIGDTIRISLTPEPGGDRTREVIVGQEILQTMGLRK 302 Query: 302 FTPMVIACPGCGRTTSTVFQDLADKIQTFLREQMPVWKGKYPGVEAMNVAVMGCIVNGPG 361 FTPMVIACPGCGRTTSTVFQ+LAD IQT+LR+QMPVWK +YPGVEAMNVAVMGCIVNGPG Sbjct: 303 FTPMVIACPGCGRTTSTVFQELADGIQTYLRDQMPVWKKQYPGVEAMNVAVMGCIVNGPG 362 Query: 362 ESKHANIGISLPGTGESPAAPVFIDGEKKMTLRGEHIAEEFQKVVLDYVESHYGQ 416 ESKHANIGISLPGTGESPAAPVF+DG K +TLRG++IA EF +VLDYV+S YG+ Sbjct: 363 ESKHANIGISLPGTGESPAAPVFVDGVKTVTLRGDNIAAEFHAIVLDYVKSRYGK 417 >ref|ZP_08275723.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Oxalobacteraceae bacterium IMCC9480] gb|EGF30810.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Oxalobacteraceae bacterium IMCC9480] Length = 429 Score = 729 bits (1882), Expect = 0.0, Method: Compositional matrix adjust. Identities = 359/415 (86%), Positives = 388/415 (93%) Query: 5 PIASGPLVRRNSRRVVISHGGREIVVGGGAPVMVQSMTNTDTADAIGTAIQIKDLARAGS 64 PI SGP +RR R+V I HG I+VGG APV+VQSMTNTDTADAIGTAIQIK+LARAGS Sbjct: 13 PIPSGPALRRIVRQVAIRHGDHVILVGGDAPVVVQSMTNTDTADAIGTAIQIKELARAGS 72 Query: 65 EVVRLTVNTPEAAAAVPAIREQLDRMGVDVPLVGDFHYNGHTLLTEYPECAQALSKYRIN 124 E+VR+TVN EAAAAVPAIREQLDRMGV+VPLVGDFHYNGHTLL +YP+CA+ALSKYRIN Sbjct: 73 ELVRITVNNAEAAAAVPAIREQLDRMGVNVPLVGDFHYNGHTLLNDYPDCARALSKYRIN 132 Query: 125 PGNVGKGAKRDTQFAQMIEVACKYDKPVRIGVNWGSLDQALLARIMDENADRAEPWSAQA 184 PGNVG+GAKRDTQFAQMIEVACKYDKPVRIGVNWGSLDQALLARIMDENA RA PW+AQA Sbjct: 133 PGNVGQGAKRDTQFAQMIEVACKYDKPVRIGVNWGSLDQALLARIMDENAKRAVPWTAQA 192 Query: 185 VMYEALVTSAIENAQRAEELGMAGDKIILSCKVSGVQDLIAVYRELARRCDYPLHLGLTE 244 VMYEAL+TSA++NA RAEELG+A DKIILSCKVSGVQDLIAVYRELA RCDYPLHLGLTE Sbjct: 193 VMYEALITSAVDNALRAEELGLARDKIILSCKVSGVQDLIAVYRELANRCDYPLHLGLTE 252 Query: 245 AGMGSKGIVASTAALSVLLQEGIGDTIRISLTPEPGGDRTKEVVVGQEILQTMGLRKFTP 304 AGMGSKGIVASTAALSVLLQEGIGDTIRISLTPEPGGDRT+EV+VGQEILQTMGLRKFTP Sbjct: 253 AGMGSKGIVASTAALSVLLQEGIGDTIRISLTPEPGGDRTREVIVGQEILQTMGLRKFTP 312 Query: 305 MVIACPGCGRTTSTVFQDLADKIQTFLREQMPVWKGKYPGVEAMNVAVMGCIVNGPGESK 364 MVIACPGCGRTTST FQ LAD IQT+LR+QMPVWK YPGVEAMNVAVMGCIVNGPGES+ Sbjct: 313 MVIACPGCGRTTSTTFQSLADSIQTYLRDQMPVWKIDYPGVEAMNVAVMGCIVNGPGESR 372 Query: 365 HANIGISLPGTGESPAAPVFIDGEKKMTLRGEHIAEEFQKVVLDYVESHYGQGHP 419 HANIGISLPGTGE+PAAPVF+DGEK +TLRGEHI+EEFQ +VLDYV+SHYG+ P Sbjct: 373 HANIGISLPGTGETPAAPVFVDGEKTVTLRGEHISEEFQAIVLDYVQSHYGKTTP 427 >ref|YP_584254.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Cupriavidus metallidurans CH34] gb|ABF08985.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Cupriavidus metallidurans CH34] Length = 430 Score = 704 bits (1816), Expect = 0.0, Method: Compositional matrix adjust. Identities = 337/411 (81%), Positives = 370/411 (90%) Query: 5 PIASGPLVRRNSRRVVISHGGREIVVGGGAPVMVQSMTNTDTADAIGTAIQIKDLARAGS 64 P+ GPL RR SR+ + G + +GGGAPV VQSMTNTDT DAIGTAIQIK+LARAGS Sbjct: 8 PVIPGPLPRRVSRQASVVWGDNIVTIGGGAPVRVQSMTNTDTVDAIGTAIQIKELARAGS 67 Query: 65 EVVRLTVNTPEAAAAVPAIREQLDRMGVDVPLVGDFHYNGHTLLTEYPECAQALSKYRIN 124 E+VR+TVNTPEAAAAVPAIREQLDRMGVDVPLVGDFHYNGHTLL +YPECAQALSKYRIN Sbjct: 68 EIVRITVNTPEAAAAVPAIREQLDRMGVDVPLVGDFHYNGHTLLHDYPECAQALSKYRIN 127 Query: 125 PGNVGKGAKRDTQFAQMIEVACKYDKPVRIGVNWGSLDQALLARIMDENADRAEPWSAQA 184 PGNVGKGAKRD QFA+MIE+AC+Y+KPVRIGVNWGSLDQ LLARIMDENA RAEPW AQ+ Sbjct: 128 PGNVGKGAKRDKQFAEMIEMACRYNKPVRIGVNWGSLDQDLLARIMDENAQRAEPWPAQS 187 Query: 185 VMYEALVTSAIENAQRAEELGMAGDKIILSCKVSGVQDLIAVYRELARRCDYPLHLGLTE 244 VM EAL+TSAIE+AQ+AEE+G+ ++IILSCKVS VQ+L+AVYRELARRCDY LHLGLTE Sbjct: 188 VMVEALITSAIESAQKAEEIGLPANQIILSCKVSQVQELVAVYRELARRCDYALHLGLTE 247 Query: 245 AGMGSKGIVASTAALSVLLQEGIGDTIRISLTPEPGGDRTKEVVVGQEILQTMGLRKFTP 304 AGMGSKGIVASTAALSVLLQEGIGDTIRISLTPEPG R KEV VGQEILQTMGLR FTP Sbjct: 248 AGMGSKGIVASTAALSVLLQEGIGDTIRISLTPEPGAPREKEVYVGQEILQTMGLRNFTP 307 Query: 305 MVIACPGCGRTTSTVFQDLADKIQTFLREQMPVWKGKYPGVEAMNVAVMGCIVNGPGESK 364 MVIACPGCGRTTST FQ+LA IQ++LREQMPVWK YPGVE M+VAVMGCIVNGPGESK Sbjct: 308 MVIACPGCGRTTSTTFQELAASIQSYLREQMPVWKTAYPGVEEMDVAVMGCIVNGPGESK 367 Query: 365 HANIGISLPGTGESPAAPVFIDGEKKMTLRGEHIAEEFQKVVLDYVESHYG 415 HANIGISLPG+GESPAAPVF+DG K TLRGE+IA+EFQ +V +YV SHYG Sbjct: 368 HANIGISLPGSGESPAAPVFVDGVKVKTLRGENIAQEFQAIVDEYVRSHYG 418 >ref|YP_004686088.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase IspG [Cupriavidus necator N-1] gb|AEI77607.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase IspG [Cupriavidus necator N-1] Length = 430 Score = 698 bits (1802), Expect = 0.0, Method: Compositional matrix adjust. Identities = 334/413 (80%), Positives = 370/413 (89%) Query: 5 PIASGPLVRRNSRRVVISHGGREIVVGGGAPVMVQSMTNTDTADAIGTAIQIKDLARAGS 64 P+ GPL RR +R+ ++ G + +GGGAPV VQSMTNTDT DAIGTAIQ+K+LARAGS Sbjct: 8 PVLPGPLPRRQTRQARVAWGDNVVTIGGGAPVRVQSMTNTDTVDAIGTAIQVKELARAGS 67 Query: 65 EVVRLTVNTPEAAAAVPAIREQLDRMGVDVPLVGDFHYNGHTLLTEYPECAQALSKYRIN 124 E+VR+TVNTPEAAAAVP+IREQLDRMGVDVPLVGDFHYNGH LL +YP CA+ALSKYRIN Sbjct: 68 EIVRITVNTPEAAAAVPSIREQLDRMGVDVPLVGDFHYNGHKLLQDYPACAEALSKYRIN 127 Query: 125 PGNVGKGAKRDTQFAQMIEVACKYDKPVRIGVNWGSLDQALLARIMDENADRAEPWSAQA 184 PGNVG+GAKRDTQFAQMIE+AC+Y KPVRIGVNWGSLDQ LLARIMDENA RAEPW AQ+ Sbjct: 128 PGNVGQGAKRDTQFAQMIEMACRYSKPVRIGVNWGSLDQDLLARIMDENAGRAEPWPAQS 187 Query: 185 VMYEALVTSAIENAQRAEELGMAGDKIILSCKVSGVQDLIAVYRELARRCDYPLHLGLTE 244 VM EAL+TSAI++A++AEE+G+ GD+IILSCKVS VQ+L+AVYRELARRCDY LHLGLTE Sbjct: 188 VMIEALITSAIDSAKKAEEIGLPGDQIILSCKVSQVQELVAVYRELARRCDYALHLGLTE 247 Query: 245 AGMGSKGIVASTAALSVLLQEGIGDTIRISLTPEPGGDRTKEVVVGQEILQTMGLRKFTP 304 AGMGSKGIVASTAALSVLLQEGIGDTIRISLTPEPG R KEV VGQEILQTMGLR FTP Sbjct: 248 AGMGSKGIVASTAALSVLLQEGIGDTIRISLTPEPGAPREKEVYVGQEILQTMGLRNFTP 307 Query: 305 MVIACPGCGRTTSTVFQDLADKIQTFLREQMPVWKGKYPGVEAMNVAVMGCIVNGPGESK 364 MVIACPGCGRTTSTVFQ+LA IQT+LREQMP WK YPGVE M+VAVMGCIVNGPGESK Sbjct: 308 MVIACPGCGRTTSTVFQELAASIQTYLREQMPHWKTAYPGVEEMDVAVMGCIVNGPGESK 367 Query: 365 HANIGISLPGTGESPAAPVFIDGEKKMTLRGEHIAEEFQKVVLDYVESHYGQG 417 HANIGISLPG+GESPAAPVF+DG K TLRGE IAEEFQ +V +YV +HYG G Sbjct: 368 HANIGISLPGSGESPAAPVFVDGVKVKTLRGERIAEEFQAIVDEYVRTHYGPG 420 >ref|YP_726827.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Ralstonia eutropha H16] emb|CAJ93459.1| enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis [Ralstonia eutropha H16] Length = 430 Score = 696 bits (1795), Expect = 0.0, Method: Compositional matrix adjust. Identities = 332/413 (80%), Positives = 369/413 (89%) Query: 5 PIASGPLVRRNSRRVVISHGGREIVVGGGAPVMVQSMTNTDTADAIGTAIQIKDLARAGS 64 P+ GPL RR +R+ ++ G + +GGGAPV VQSMTNTDT DAIGTAIQ+K+LARAGS Sbjct: 8 PVLPGPLPRRQTRQARVAWGDNVVTIGGGAPVRVQSMTNTDTVDAIGTAIQVKELARAGS 67 Query: 65 EVVRLTVNTPEAAAAVPAIREQLDRMGVDVPLVGDFHYNGHTLLTEYPECAQALSKYRIN 124 E+VR+TVNTPEAAAAVP+IREQLDRMGVDVPLVGDFHYNGH LL +YP CA+ALSKYRIN Sbjct: 68 EIVRITVNTPEAAAAVPSIREQLDRMGVDVPLVGDFHYNGHKLLQDYPACAEALSKYRIN 127 Query: 125 PGNVGKGAKRDTQFAQMIEVACKYDKPVRIGVNWGSLDQALLARIMDENADRAEPWSAQA 184 PGNVG+GAKRDTQFAQMIE+AC+Y KPVRIGVNWGSLDQ LLARIMDENA RAEPW AQ+ Sbjct: 128 PGNVGQGAKRDTQFAQMIEMACRYHKPVRIGVNWGSLDQDLLARIMDENAGRAEPWPAQS 187 Query: 185 VMYEALVTSAIENAQRAEELGMAGDKIILSCKVSGVQDLIAVYRELARRCDYPLHLGLTE 244 VM EAL+TSAI++A++AEE+G+ GD+IILSCKVS VQ+L+AVYRELARRCDY LHLGLTE Sbjct: 188 VMIEALITSAIDSAKKAEEIGLPGDQIILSCKVSQVQELVAVYRELARRCDYALHLGLTE 247 Query: 245 AGMGSKGIVASTAALSVLLQEGIGDTIRISLTPEPGGDRTKEVVVGQEILQTMGLRKFTP 304 AGMGSKGIVASTAALSVLLQEGIGDTIRISLTPEPG R KEV VGQEILQTMG+R FTP Sbjct: 248 AGMGSKGIVASTAALSVLLQEGIGDTIRISLTPEPGAPREKEVYVGQEILQTMGMRNFTP 307 Query: 305 MVIACPGCGRTTSTVFQDLADKIQTFLREQMPVWKGKYPGVEAMNVAVMGCIVNGPGESK 364 MVIACPGCGRTTSTVFQ+LA IQ +LREQMP WK YPGVE M+VAVMGCIVNGPGESK Sbjct: 308 MVIACPGCGRTTSTVFQELAASIQAYLREQMPQWKTAYPGVEEMDVAVMGCIVNGPGESK 367 Query: 365 HANIGISLPGTGESPAAPVFIDGEKKMTLRGEHIAEEFQKVVLDYVESHYGQG 417 HANIGISLPG+GESPAAPVF+DG K TLRGE IAEEFQ +V +YV +HYG G Sbjct: 368 HANIGISLPGSGESPAAPVFVDGVKVKTLRGERIAEEFQAIVDEYVRTHYGPG 420 >ref|YP_002005913.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Cupriavidus taiwanensis LMG 19424] emb|CAQ69850.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Cupriavidus taiwanensis LMG 19424] Length = 430 Score = 696 bits (1795), Expect = 0.0, Method: Compositional matrix adjust. Identities = 334/413 (80%), Positives = 369/413 (89%) Query: 5 PIASGPLVRRNSRRVVISHGGREIVVGGGAPVMVQSMTNTDTADAIGTAIQIKDLARAGS 64 P+ GPL RR +R+ ++ G + +GGGAPV VQSMTNTDT DAIGTAIQIK+LARAGS Sbjct: 8 PVLPGPLPRRQTRQARVAWGDNVVTIGGGAPVRVQSMTNTDTVDAIGTAIQIKELARAGS 67 Query: 65 EVVRLTVNTPEAAAAVPAIREQLDRMGVDVPLVGDFHYNGHTLLTEYPECAQALSKYRIN 124 E+VR+TVNTPEAAAAVP+IREQLDRMGVDVPLVGDFHYNGH LL +YP CA+ALSKYRIN Sbjct: 68 EIVRITVNTPEAAAAVPSIREQLDRMGVDVPLVGDFHYNGHKLLQDYPACAEALSKYRIN 127 Query: 125 PGNVGKGAKRDTQFAQMIEVACKYDKPVRIGVNWGSLDQALLARIMDENADRAEPWSAQA 184 PGNVG+GAKRDTQFAQMIE+AC+Y+KPVRIGVNWGSLDQ LLARIMDENA RAEPW AQ+ Sbjct: 128 PGNVGQGAKRDTQFAQMIEMACRYNKPVRIGVNWGSLDQDLLARIMDENAGRAEPWPAQS 187 Query: 185 VMYEALVTSAIENAQRAEELGMAGDKIILSCKVSGVQDLIAVYRELARRCDYPLHLGLTE 244 VM EAL+TSAI++A++AEE+G+ G +IILSCKVS VQ+LIAVYRELARRCDY LHLGLTE Sbjct: 188 VMIEALITSAIDSARKAEEIGLPGSQIILSCKVSQVQELIAVYRELARRCDYALHLGLTE 247 Query: 245 AGMGSKGIVASTAALSVLLQEGIGDTIRISLTPEPGGDRTKEVVVGQEILQTMGLRKFTP 304 AGMGSKGIVASTAALSVLLQEGIGDTIRISLTPEPG R KEV VGQEILQTMGLR FTP Sbjct: 248 AGMGSKGIVASTAALSVLLQEGIGDTIRISLTPEPGAPREKEVYVGQEILQTMGLRNFTP 307 Query: 305 MVIACPGCGRTTSTVFQDLADKIQTFLREQMPVWKGKYPGVEAMNVAVMGCIVNGPGESK 364 MVIACPGCGRTTSTVFQ+LA IQ +LREQMP WK YPGVE M+VAVMGCIVNGPGESK Sbjct: 308 MVIACPGCGRTTSTVFQELAASIQAYLREQMPQWKTAYPGVEEMDVAVMGCIVNGPGESK 367 Query: 365 HANIGISLPGTGESPAAPVFIDGEKKMTLRGEHIAEEFQKVVLDYVESHYGQG 417 HANIGISLPG+GESPAAPVF+DG K TLRGE IAEEFQ +V +YV +HYG G Sbjct: 368 HANIGISLPGSGESPAAPVFVDGVKVKTLRGERIAEEFQAIVDEYVRTHYGPG 420 >emb|CBJ38463.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Ralstonia solanacearum CMR15] Length = 431 Score = 694 bits (1792), Expect = 0.0, Method: Compositional matrix adjust. Identities = 335/412 (81%), Positives = 368/412 (89%) Query: 4 SPIASGPLVRRNSRRVVISHGGREIVVGGGAPVMVQSMTNTDTADAIGTAIQIKDLARAG 63 +P GPL RR+SR I G R + VGG APV VQSMTNTDTADAIGTAIQ+K+LAR G Sbjct: 10 APALPGPLPRRHSRAAEIRWGERLVRVGGDAPVCVQSMTNTDTADAIGTAIQVKELARTG 69 Query: 64 SEVVRLTVNTPEAAAAVPAIREQLDRMGVDVPLVGDFHYNGHTLLTEYPECAQALSKYRI 123 SE+VR+TVNTPEAAAAVPAIREQLDRMG+DVPLVGDFHYNGH LL ++P CA+ALSKYRI Sbjct: 70 SELVRITVNTPEAAAAVPAIREQLDRMGIDVPLVGDFHYNGHKLLQDHPGCAEALSKYRI 129 Query: 124 NPGNVGKGAKRDTQFAQMIEVACKYDKPVRIGVNWGSLDQALLARIMDENADRAEPWSAQ 183 NPGNVG+GAKRDTQFAQMIE AC+Y KPVRIGVNWGSLDQ LLARIMDENA RA PW A+ Sbjct: 130 NPGNVGQGAKRDTQFAQMIETACRYGKPVRIGVNWGSLDQDLLARIMDENAQRAAPWDAR 189 Query: 184 AVMYEALVTSAIENAQRAEELGMAGDKIILSCKVSGVQDLIAVYRELARRCDYPLHLGLT 243 AVM EAL+TSAIE+A++AEE+G+ G +IILSCKVS VQDLIAVYRELARRCDY LHLGLT Sbjct: 190 AVMIEALITSAIESARKAEEIGLPGSQIILSCKVSAVQDLIAVYRELARRCDYALHLGLT 249 Query: 244 EAGMGSKGIVASTAALSVLLQEGIGDTIRISLTPEPGGDRTKEVVVGQEILQTMGLRKFT 303 EAGMGSKGIVASTAALSVLLQEGIGDTIRISLTPEPG R KEV+V QEILQTMGLR FT Sbjct: 250 EAGMGSKGIVASTAALSVLLQEGIGDTIRISLTPEPGAPREKEVIVAQEILQTMGLRNFT 309 Query: 304 PMVIACPGCGRTTSTVFQDLADKIQTFLREQMPVWKGKYPGVEAMNVAVMGCIVNGPGES 363 PMVIACPGCGRTTSTVFQ+LA +IQ++LREQMP+WK +YPGVE MNVAVMGCIVNGPGES Sbjct: 310 PMVIACPGCGRTTSTVFQELAARIQSYLREQMPMWKTQYPGVEEMNVAVMGCIVNGPGES 369 Query: 364 KHANIGISLPGTGESPAAPVFIDGEKKMTLRGEHIAEEFQKVVLDYVESHYG 415 KHANIGISLPGTGESPAAPVF+DG K TLRGE IAE+FQ +V +YV +HYG Sbjct: 370 KHANIGISLPGTGESPAAPVFVDGVKVKTLRGERIAEDFQVIVDEYVRTHYG 421